Multiple sequence alignment - TraesCS7A01G221400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G221400 chr7A 100.000 3184 0 0 1 3184 189717090 189720273 0.000000e+00 5880.0
1 TraesCS7A01G221400 chr7A 86.617 807 88 13 1 796 156127603 156128400 0.000000e+00 874.0
2 TraesCS7A01G221400 chr7A 85.253 651 81 11 157 796 7963448 7964094 0.000000e+00 656.0
3 TraesCS7A01G221400 chr7A 84.946 651 83 11 157 796 8215706 8216352 0.000000e+00 645.0
4 TraesCS7A01G221400 chr7A 81.907 713 124 5 1428 2135 65505298 65506010 5.880000e-167 597.0
5 TraesCS7A01G221400 chr7A 96.341 164 5 1 3022 3184 576360860 576360697 5.240000e-68 268.0
6 TraesCS7A01G221400 chr7B 91.295 1907 98 33 810 2666 150188770 150186882 0.000000e+00 2540.0
7 TraesCS7A01G221400 chr7B 88.926 298 31 2 1429 1725 150561788 150561492 1.800000e-97 366.0
8 TraesCS7A01G221400 chr7B 96.341 164 4 2 3022 3184 597154070 597154232 5.240000e-68 268.0
9 TraesCS7A01G221400 chr7B 79.558 181 21 3 2465 2631 700733705 700733527 7.220000e-22 115.0
10 TraesCS7A01G221400 chr7B 75.806 186 24 7 2461 2631 339021629 339021450 1.220000e-09 75.0
11 TraesCS7A01G221400 chr7D 91.402 1698 80 33 810 2457 181976556 181974875 0.000000e+00 2266.0
12 TraesCS7A01G221400 chr7D 82.353 714 119 7 1428 2135 62170705 62171417 5.840000e-172 614.0
13 TraesCS7A01G221400 chr7D 82.378 715 117 8 1428 2135 62929961 62930673 5.840000e-172 614.0
14 TraesCS7A01G221400 chr7D 92.308 364 25 3 2664 3025 62130321 62129959 6.090000e-142 514.0
15 TraesCS7A01G221400 chr7D 92.287 363 24 4 2664 3025 539763721 539763362 2.190000e-141 512.0
16 TraesCS7A01G221400 chr7D 88.889 297 31 2 1429 1724 182333880 182333585 6.490000e-97 364.0
17 TraesCS7A01G221400 chr7D 78.333 120 21 3 1932 2047 181843363 181843245 4.410000e-09 73.1
18 TraesCS7A01G221400 chr5D 87.392 809 81 11 1 796 543511550 543510750 0.000000e+00 909.0
19 TraesCS7A01G221400 chr5D 84.488 722 90 10 1022 1724 379235219 379234501 0.000000e+00 693.0
20 TraesCS7A01G221400 chr5D 92.541 362 24 3 2666 3025 118066406 118066766 1.690000e-142 516.0
21 TraesCS7A01G221400 chr5D 83.708 178 23 3 1858 2035 379234250 379234079 2.540000e-36 163.0
22 TraesCS7A01G221400 chr1D 87.406 802 82 13 1 796 389462117 389462905 0.000000e+00 904.0
23 TraesCS7A01G221400 chr1D 93.036 359 23 2 2669 3025 202951224 202951582 1.010000e-144 523.0
24 TraesCS7A01G221400 chr1D 92.308 364 23 5 2665 3025 319517717 319517356 2.190000e-141 512.0
25 TraesCS7A01G221400 chr2D 86.156 809 94 12 1 796 4320640 4321443 0.000000e+00 857.0
26 TraesCS7A01G221400 chr2D 86.156 809 93 13 1 796 4377364 4378166 0.000000e+00 856.0
27 TraesCS7A01G221400 chr2D 86.189 572 74 5 4 574 555236281 555235714 5.840000e-172 614.0
28 TraesCS7A01G221400 chr1A 89.392 641 63 5 25 661 402251931 402252570 0.000000e+00 802.0
29 TraesCS7A01G221400 chr1A 96.914 162 4 1 3024 3184 524256295 524256134 1.460000e-68 270.0
30 TraesCS7A01G221400 chr1A 96.319 163 6 0 3022 3184 585703709 585703547 5.240000e-68 268.0
31 TraesCS7A01G221400 chr1A 78.899 109 16 2 2466 2567 536641781 536641673 2.050000e-07 67.6
32 TraesCS7A01G221400 chr5A 84.951 711 89 13 1022 1724 479462488 479461788 0.000000e+00 704.0
33 TraesCS7A01G221400 chr5A 82.530 166 23 3 1858 2023 479461200 479461041 1.190000e-29 141.0
34 TraesCS7A01G221400 chr5B 84.056 715 100 9 1022 1724 454908048 454907336 0.000000e+00 676.0
35 TraesCS7A01G221400 chr5B 95.349 172 5 3 3014 3184 147166815 147166646 1.460000e-68 270.0
36 TraesCS7A01G221400 chr5B 96.273 161 5 1 3025 3184 44171343 44171183 2.440000e-66 263.0
37 TraesCS7A01G221400 chr2B 93.132 364 23 2 2664 3025 728230448 728230811 1.680000e-147 532.0
38 TraesCS7A01G221400 chr3D 93.036 359 23 2 2669 3025 5561720 5561362 1.010000e-144 523.0
39 TraesCS7A01G221400 chr3D 92.479 359 24 3 2669 3025 610887153 610886796 7.880000e-141 510.0
40 TraesCS7A01G221400 chr4D 92.479 359 25 2 2669 3025 306374185 306374543 2.190000e-141 512.0
41 TraesCS7A01G221400 chr4A 77.615 545 92 20 1 520 594347182 594347721 1.440000e-78 303.0
42 TraesCS7A01G221400 chr4A 82.313 294 32 12 1 288 665954835 665955114 1.480000e-58 237.0
43 TraesCS7A01G221400 chr3B 97.500 160 4 0 3025 3184 52032168 52032009 1.130000e-69 274.0
44 TraesCS7A01G221400 chr1B 96.933 163 4 1 3023 3184 34349118 34349280 4.050000e-69 272.0
45 TraesCS7A01G221400 chr2A 96.341 164 4 1 3023 3184 188261410 188261573 5.240000e-68 268.0
46 TraesCS7A01G221400 chr6A 82.308 130 15 6 2464 2586 560079800 560079672 4.340000e-19 106.0
47 TraesCS7A01G221400 chr4B 75.263 190 30 10 2456 2631 510168049 510167863 1.220000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G221400 chr7A 189717090 189720273 3183 False 5880.0 5880 100.0000 1 3184 1 chr7A.!!$F5 3183
1 TraesCS7A01G221400 chr7A 156127603 156128400 797 False 874.0 874 86.6170 1 796 1 chr7A.!!$F4 795
2 TraesCS7A01G221400 chr7A 7963448 7964094 646 False 656.0 656 85.2530 157 796 1 chr7A.!!$F1 639
3 TraesCS7A01G221400 chr7A 8215706 8216352 646 False 645.0 645 84.9460 157 796 1 chr7A.!!$F2 639
4 TraesCS7A01G221400 chr7A 65505298 65506010 712 False 597.0 597 81.9070 1428 2135 1 chr7A.!!$F3 707
5 TraesCS7A01G221400 chr7B 150186882 150188770 1888 True 2540.0 2540 91.2950 810 2666 1 chr7B.!!$R1 1856
6 TraesCS7A01G221400 chr7D 181974875 181976556 1681 True 2266.0 2266 91.4020 810 2457 1 chr7D.!!$R3 1647
7 TraesCS7A01G221400 chr7D 62170705 62171417 712 False 614.0 614 82.3530 1428 2135 1 chr7D.!!$F1 707
8 TraesCS7A01G221400 chr7D 62929961 62930673 712 False 614.0 614 82.3780 1428 2135 1 chr7D.!!$F2 707
9 TraesCS7A01G221400 chr5D 543510750 543511550 800 True 909.0 909 87.3920 1 796 1 chr5D.!!$R1 795
10 TraesCS7A01G221400 chr5D 379234079 379235219 1140 True 428.0 693 84.0980 1022 2035 2 chr5D.!!$R2 1013
11 TraesCS7A01G221400 chr1D 389462117 389462905 788 False 904.0 904 87.4060 1 796 1 chr1D.!!$F2 795
12 TraesCS7A01G221400 chr2D 4320640 4321443 803 False 857.0 857 86.1560 1 796 1 chr2D.!!$F1 795
13 TraesCS7A01G221400 chr2D 4377364 4378166 802 False 856.0 856 86.1560 1 796 1 chr2D.!!$F2 795
14 TraesCS7A01G221400 chr2D 555235714 555236281 567 True 614.0 614 86.1890 4 574 1 chr2D.!!$R1 570
15 TraesCS7A01G221400 chr1A 402251931 402252570 639 False 802.0 802 89.3920 25 661 1 chr1A.!!$F1 636
16 TraesCS7A01G221400 chr5A 479461041 479462488 1447 True 422.5 704 83.7405 1022 2023 2 chr5A.!!$R1 1001
17 TraesCS7A01G221400 chr5B 454907336 454908048 712 True 676.0 676 84.0560 1022 1724 1 chr5B.!!$R3 702
18 TraesCS7A01G221400 chr4A 594347182 594347721 539 False 303.0 303 77.6150 1 520 1 chr4A.!!$F1 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.107606 TCCTCGTCTTCCTCCTCTCG 60.108 60.0 0.00 0.0 0.00 4.04 F
299 317 0.311790 ACGCGACGGTCTTAAAGTGA 59.688 50.0 15.93 0.0 0.00 3.41 F
721 764 0.319383 TTAAAACAGGCGCGACCGTA 60.319 50.0 9.25 0.0 46.52 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1832 2093 0.996462 ACGGCACAACGACGATAATG 59.004 50.0 0.00 0.00 37.61 1.90 R
2148 2723 0.179029 CCAACACCAACCTCGTCCTT 60.179 55.0 0.00 0.00 0.00 3.36 R
2605 3184 0.179248 GCAAGTTTAGTGACGCGAGC 60.179 55.0 15.93 4.68 0.00 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 0.107606 TCCTCGTCTTCCTCCTCTCG 60.108 60.000 0.00 0.00 0.00 4.04
222 226 4.148825 CGAAGACGGAGCAGGGGG 62.149 72.222 0.00 0.00 35.72 5.40
299 317 0.311790 ACGCGACGGTCTTAAAGTGA 59.688 50.000 15.93 0.00 0.00 3.41
362 380 4.272100 GCCTACGAGCGGTTCAAA 57.728 55.556 0.00 0.00 0.00 2.69
480 511 3.391382 GGTCTAGCACGGGTGGCT 61.391 66.667 0.43 0.00 45.18 4.75
549 580 2.328099 GGCACCAACTTCGCCTCTG 61.328 63.158 0.00 0.00 42.78 3.35
586 619 3.932089 GGCCCGTAGTCACGTTTATTTTA 59.068 43.478 0.00 0.00 46.96 1.52
589 622 6.403527 GGCCCGTAGTCACGTTTATTTTATTT 60.404 38.462 0.00 0.00 46.96 1.40
637 672 5.957842 ATTTCAGTTTGCCGAAGTAATGA 57.042 34.783 0.00 0.00 0.00 2.57
638 673 5.957842 TTTCAGTTTGCCGAAGTAATGAT 57.042 34.783 0.00 0.00 0.00 2.45
639 674 5.957842 TTCAGTTTGCCGAAGTAATGATT 57.042 34.783 0.00 0.00 0.00 2.57
640 675 5.295431 TCAGTTTGCCGAAGTAATGATTG 57.705 39.130 0.00 0.00 0.00 2.67
641 676 4.759693 TCAGTTTGCCGAAGTAATGATTGT 59.240 37.500 0.00 0.00 0.00 2.71
644 679 6.088085 CAGTTTGCCGAAGTAATGATTGTTTC 59.912 38.462 0.00 0.00 0.00 2.78
645 680 4.335082 TGCCGAAGTAATGATTGTTTCG 57.665 40.909 14.70 14.70 40.03 3.46
646 681 3.098636 GCCGAAGTAATGATTGTTTCGC 58.901 45.455 15.66 10.20 39.27 4.70
648 683 3.126171 CCGAAGTAATGATTGTTTCGCCA 59.874 43.478 15.66 0.00 39.27 5.69
649 684 4.378978 CCGAAGTAATGATTGTTTCGCCAA 60.379 41.667 15.66 0.00 39.27 4.52
662 697 6.576662 TGTTTCGCCAAAATATTTGTCCTA 57.423 33.333 0.39 0.00 0.00 2.94
669 704 5.451242 GCCAAAATATTTGTCCTATTCGCCA 60.451 40.000 0.39 0.00 0.00 5.69
719 762 0.723459 GTTTAAAACAGGCGCGACCG 60.723 55.000 9.25 0.00 46.52 4.79
721 764 0.319383 TTAAAACAGGCGCGACCGTA 60.319 50.000 9.25 0.00 46.52 4.02
767 811 4.028490 AGGCCGATTTGACCGCCA 62.028 61.111 0.00 0.00 0.00 5.69
768 812 3.059386 GGCCGATTTGACCGCCAA 61.059 61.111 0.00 0.00 0.00 4.52
776 820 3.561120 TTGACCGCCAATTCGCCCT 62.561 57.895 0.00 0.00 0.00 5.19
779 823 2.516930 CCGCCAATTCGCCCTCAT 60.517 61.111 0.00 0.00 0.00 2.90
806 850 4.379339 GACTTTTCGAGGCTAGAGATGT 57.621 45.455 6.43 6.43 0.00 3.06
807 851 4.749976 GACTTTTCGAGGCTAGAGATGTT 58.250 43.478 7.79 0.00 0.00 2.71
808 852 4.749976 ACTTTTCGAGGCTAGAGATGTTC 58.250 43.478 0.00 0.00 0.00 3.18
809 853 4.464597 ACTTTTCGAGGCTAGAGATGTTCT 59.535 41.667 0.00 0.00 40.06 3.01
810 854 5.652891 ACTTTTCGAGGCTAGAGATGTTCTA 59.347 40.000 0.00 0.00 37.36 2.10
811 855 6.153000 ACTTTTCGAGGCTAGAGATGTTCTAA 59.847 38.462 0.00 0.00 37.93 2.10
812 856 6.716934 TTTCGAGGCTAGAGATGTTCTAAT 57.283 37.500 0.00 0.00 37.93 1.73
822 866 6.130298 AGAGATGTTCTAATGACGAGACAG 57.870 41.667 0.00 0.00 33.23 3.51
896 940 1.087771 GGGAATGTTGAGCCGTACGG 61.088 60.000 30.06 30.06 38.57 4.02
918 962 3.366985 GGGCGTCCCTTTTGTAATCAAAG 60.367 47.826 0.00 0.00 41.34 2.77
927 971 8.437575 TCCCTTTTGTAATCAAAGTCTTCTACT 58.562 33.333 0.00 0.00 43.17 2.57
942 994 6.154706 AGTCTTCTACTGGTCATCCGTTTATT 59.845 38.462 0.00 0.00 36.93 1.40
946 998 7.591421 TCTACTGGTCATCCGTTTATTATCA 57.409 36.000 0.00 0.00 36.30 2.15
947 999 8.190326 TCTACTGGTCATCCGTTTATTATCAT 57.810 34.615 0.00 0.00 36.30 2.45
948 1000 8.304596 TCTACTGGTCATCCGTTTATTATCATC 58.695 37.037 0.00 0.00 36.30 2.92
950 1002 6.043243 ACTGGTCATCCGTTTATTATCATCCT 59.957 38.462 0.00 0.00 36.30 3.24
962 1023 9.988350 GTTTATTATCATCCTGCATAAATACGG 57.012 33.333 0.00 0.00 0.00 4.02
972 1033 1.495584 ATAAATACGGGCGCACGCAG 61.496 55.000 35.17 6.75 44.11 5.18
1004 1077 0.591170 AAAACGAGTTGCGACATGGG 59.409 50.000 6.90 0.00 44.57 4.00
1020 1093 1.812507 GGGTGCGTCCGTATGGTTC 60.813 63.158 0.00 0.00 37.00 3.62
1035 1108 0.320771 GGTTCTTCTTCTCGCTGGCA 60.321 55.000 0.00 0.00 0.00 4.92
1056 1129 2.731571 GCTCGGTGCCCTCCATGTA 61.732 63.158 0.00 0.00 35.15 2.29
1063 1136 1.961277 GCCCTCCATGTATTCGCCG 60.961 63.158 0.00 0.00 0.00 6.46
1068 1141 0.821517 TCCATGTATTCGCCGTCAGT 59.178 50.000 0.00 0.00 0.00 3.41
1385 1483 1.594293 CGTGCGTGTCCTTCTGGTT 60.594 57.895 0.00 0.00 34.23 3.67
1424 1523 1.063616 GTCGTGTCGATGGATCTTCGA 59.936 52.381 14.52 14.52 42.87 3.71
1807 2044 0.870307 CAGGTATGTACTCGGTGCGC 60.870 60.000 0.00 0.00 0.00 6.09
1830 2091 1.474648 CTCGCATCCATCGTGTCACG 61.475 60.000 19.38 19.38 44.19 4.35
2087 2662 2.353208 GGAGTATAATCTGCGGCAGAGG 60.353 54.545 33.14 10.00 44.08 3.69
2148 2723 1.537397 AGCTCTCCTGTTCCTGCCA 60.537 57.895 0.00 0.00 0.00 4.92
2174 2749 0.750182 AGGTTGGTGTTGGTGTTCGG 60.750 55.000 0.00 0.00 0.00 4.30
2208 2783 2.323059 GTTCGGAGTTCGTGGTTACTC 58.677 52.381 0.00 0.00 40.00 2.59
2214 2789 1.058404 GTTCGTGGTTACTCGAGCAC 58.942 55.000 13.61 11.40 42.61 4.40
2294 2869 2.741145 ACTGGTTGGGCAAAACTGTTA 58.259 42.857 0.00 0.00 34.23 2.41
2335 2913 5.714333 TGCAGGGAAGTAATGCATCTTTTTA 59.286 36.000 0.00 0.00 44.56 1.52
2404 2982 3.923017 ATAACAAGTTCAAGTGCAGCC 57.077 42.857 0.00 0.00 0.00 4.85
2424 3002 6.260936 GCAGCCAAATAAAATAGTCTGCTAGA 59.739 38.462 0.00 0.00 41.53 2.43
2487 3065 3.763097 ATGATAAATGCCACACGTGTG 57.237 42.857 36.13 36.13 45.23 3.82
2503 3081 0.032815 TGTGACACGAAGCATTCCGA 59.967 50.000 0.22 0.00 43.81 4.55
2510 3088 1.207089 ACGAAGCATTCCGATCCTGAA 59.793 47.619 0.00 0.00 43.81 3.02
2511 3089 1.863454 CGAAGCATTCCGATCCTGAAG 59.137 52.381 0.00 0.00 43.81 3.02
2535 3114 8.870075 AGTTTTCTAGAATAAAGTTGCCATCT 57.130 30.769 5.89 0.00 0.00 2.90
2536 3115 8.951243 AGTTTTCTAGAATAAAGTTGCCATCTC 58.049 33.333 5.89 0.00 0.00 2.75
2537 3116 8.730680 GTTTTCTAGAATAAAGTTGCCATCTCA 58.269 33.333 5.89 0.00 0.00 3.27
2538 3117 8.862325 TTTCTAGAATAAAGTTGCCATCTCAA 57.138 30.769 5.89 0.00 0.00 3.02
2539 3118 8.862325 TTCTAGAATAAAGTTGCCATCTCAAA 57.138 30.769 0.00 0.00 0.00 2.69
2540 3119 8.862325 TCTAGAATAAAGTTGCCATCTCAAAA 57.138 30.769 0.00 0.00 0.00 2.44
2541 3120 8.950210 TCTAGAATAAAGTTGCCATCTCAAAAG 58.050 33.333 0.00 0.00 0.00 2.27
2542 3121 7.765695 AGAATAAAGTTGCCATCTCAAAAGA 57.234 32.000 0.00 0.00 35.54 2.52
2543 3122 8.181904 AGAATAAAGTTGCCATCTCAAAAGAA 57.818 30.769 0.00 0.00 34.49 2.52
2594 3173 2.224606 AGTGGACATGCTTGACAACTG 58.775 47.619 10.53 0.00 0.00 3.16
2631 3210 3.119849 GCGTCACTAAACTTGCCATCAAT 60.120 43.478 0.00 0.00 0.00 2.57
2636 3215 5.534278 TCACTAAACTTGCCATCAATGTTCA 59.466 36.000 0.00 0.00 0.00 3.18
2651 3230 5.237127 TCAATGTTCAGAGTTGTCATGTGTC 59.763 40.000 0.00 0.00 0.00 3.67
2666 3245 3.552132 TGTGTCCGTGCCATATGTATT 57.448 42.857 1.24 0.00 0.00 1.89
2667 3246 3.202097 TGTGTCCGTGCCATATGTATTG 58.798 45.455 1.24 0.00 0.00 1.90
2668 3247 3.202906 GTGTCCGTGCCATATGTATTGT 58.797 45.455 1.24 0.00 0.00 2.71
2669 3248 3.625764 GTGTCCGTGCCATATGTATTGTT 59.374 43.478 1.24 0.00 0.00 2.83
2670 3249 4.095782 GTGTCCGTGCCATATGTATTGTTT 59.904 41.667 1.24 0.00 0.00 2.83
2671 3250 4.702612 TGTCCGTGCCATATGTATTGTTTT 59.297 37.500 1.24 0.00 0.00 2.43
2672 3251 5.184096 TGTCCGTGCCATATGTATTGTTTTT 59.816 36.000 1.24 0.00 0.00 1.94
2691 3270 4.586306 TTTTAGAATGAAGGAGGACCCC 57.414 45.455 0.00 0.00 36.73 4.95
2692 3271 2.191981 TAGAATGAAGGAGGACCCCC 57.808 55.000 0.00 0.00 36.73 5.40
2693 3272 0.983378 AGAATGAAGGAGGACCCCCG 60.983 60.000 0.00 0.00 37.58 5.73
2694 3273 1.984288 GAATGAAGGAGGACCCCCGG 61.984 65.000 0.00 0.00 37.58 5.73
2702 3281 4.791069 GGACCCCCGGCCTCTGTA 62.791 72.222 0.00 0.00 0.00 2.74
2703 3282 2.446036 GACCCCCGGCCTCTGTAT 60.446 66.667 0.00 0.00 0.00 2.29
2704 3283 2.446036 ACCCCCGGCCTCTGTATC 60.446 66.667 0.00 0.00 0.00 2.24
2705 3284 2.122813 CCCCCGGCCTCTGTATCT 60.123 66.667 0.00 0.00 0.00 1.98
2706 3285 2.511452 CCCCCGGCCTCTGTATCTG 61.511 68.421 0.00 0.00 0.00 2.90
2707 3286 2.511452 CCCCGGCCTCTGTATCTGG 61.511 68.421 0.00 0.00 0.00 3.86
2708 3287 1.457643 CCCGGCCTCTGTATCTGGA 60.458 63.158 0.00 0.00 0.00 3.86
2709 3288 1.742768 CCGGCCTCTGTATCTGGAC 59.257 63.158 0.00 0.00 0.00 4.02
2710 3289 1.360551 CGGCCTCTGTATCTGGACG 59.639 63.158 0.00 0.00 46.31 4.79
2711 3290 2.808598 GGCCTCTGTATCTGGACGA 58.191 57.895 0.00 0.00 0.00 4.20
2712 3291 1.333177 GGCCTCTGTATCTGGACGAT 58.667 55.000 0.00 0.00 36.11 3.73
2713 3292 1.000283 GGCCTCTGTATCTGGACGATG 60.000 57.143 0.00 0.00 33.48 3.84
2714 3293 1.604185 GCCTCTGTATCTGGACGATGC 60.604 57.143 0.00 0.00 35.55 3.91
2715 3294 1.683385 CCTCTGTATCTGGACGATGCA 59.317 52.381 0.00 0.00 41.58 3.96
2716 3295 2.298446 CCTCTGTATCTGGACGATGCAT 59.702 50.000 0.00 0.00 42.63 3.96
2717 3296 3.315418 CTCTGTATCTGGACGATGCATG 58.685 50.000 2.46 0.00 42.63 4.06
2718 3297 1.797046 CTGTATCTGGACGATGCATGC 59.203 52.381 11.82 11.82 42.63 4.06
2719 3298 1.138661 TGTATCTGGACGATGCATGCA 59.861 47.619 25.04 25.04 39.41 3.96
2720 3299 1.797046 GTATCTGGACGATGCATGCAG 59.203 52.381 26.69 15.79 36.90 4.41
2721 3300 1.164662 ATCTGGACGATGCATGCAGC 61.165 55.000 25.69 25.69 45.96 5.25
2722 3301 2.825387 TGGACGATGCATGCAGCC 60.825 61.111 28.76 23.21 44.83 4.85
2723 3302 2.825387 GGACGATGCATGCAGCCA 60.825 61.111 28.76 3.84 44.83 4.75
2724 3303 2.406401 GACGATGCATGCAGCCAC 59.594 61.111 28.76 18.86 44.83 5.01
2725 3304 2.045634 ACGATGCATGCAGCCACT 60.046 55.556 28.76 10.64 44.83 4.00
2726 3305 1.651240 GACGATGCATGCAGCCACTT 61.651 55.000 28.76 9.83 44.83 3.16
2727 3306 1.246056 ACGATGCATGCAGCCACTTT 61.246 50.000 28.76 9.02 44.83 2.66
2728 3307 0.734309 CGATGCATGCAGCCACTTTA 59.266 50.000 28.76 0.09 44.83 1.85
2729 3308 1.335810 CGATGCATGCAGCCACTTTAT 59.664 47.619 28.76 7.39 44.83 1.40
2730 3309 2.223641 CGATGCATGCAGCCACTTTATT 60.224 45.455 28.76 6.59 44.83 1.40
2731 3310 3.003585 CGATGCATGCAGCCACTTTATTA 59.996 43.478 28.76 0.00 44.83 0.98
2732 3311 4.497842 CGATGCATGCAGCCACTTTATTAA 60.498 41.667 28.76 0.00 44.83 1.40
2733 3312 5.535333 GATGCATGCAGCCACTTTATTAAT 58.465 37.500 25.21 2.11 44.83 1.40
2734 3313 5.341872 TGCATGCAGCCACTTTATTAATT 57.658 34.783 18.46 0.00 44.83 1.40
2735 3314 6.462552 TGCATGCAGCCACTTTATTAATTA 57.537 33.333 18.46 0.00 44.83 1.40
2736 3315 7.053316 TGCATGCAGCCACTTTATTAATTAT 57.947 32.000 18.46 0.00 44.83 1.28
2737 3316 7.499292 TGCATGCAGCCACTTTATTAATTATT 58.501 30.769 18.46 0.00 44.83 1.40
2738 3317 7.652909 TGCATGCAGCCACTTTATTAATTATTC 59.347 33.333 18.46 0.00 44.83 1.75
2739 3318 7.652909 GCATGCAGCCACTTTATTAATTATTCA 59.347 33.333 14.21 0.00 37.23 2.57
2740 3319 8.971321 CATGCAGCCACTTTATTAATTATTCAC 58.029 33.333 0.00 0.00 0.00 3.18
2741 3320 8.060931 TGCAGCCACTTTATTAATTATTCACA 57.939 30.769 0.00 0.00 0.00 3.58
2742 3321 7.973388 TGCAGCCACTTTATTAATTATTCACAC 59.027 33.333 0.00 0.00 0.00 3.82
2743 3322 7.973388 GCAGCCACTTTATTAATTATTCACACA 59.027 33.333 0.00 0.00 0.00 3.72
2744 3323 9.853555 CAGCCACTTTATTAATTATTCACACAA 57.146 29.630 0.00 0.00 0.00 3.33
2763 3342 9.562408 TCACACAAAACCTTATAAAGTCATACA 57.438 29.630 0.00 0.00 0.00 2.29
2779 3358 9.946165 AAAGTCATACAACAGTAAAACTAAAGC 57.054 29.630 0.00 0.00 0.00 3.51
2780 3359 8.095937 AGTCATACAACAGTAAAACTAAAGCC 57.904 34.615 0.00 0.00 0.00 4.35
2781 3360 7.717875 AGTCATACAACAGTAAAACTAAAGCCA 59.282 33.333 0.00 0.00 0.00 4.75
2782 3361 7.801783 GTCATACAACAGTAAAACTAAAGCCAC 59.198 37.037 0.00 0.00 0.00 5.01
2783 3362 5.509716 ACAACAGTAAAACTAAAGCCACC 57.490 39.130 0.00 0.00 0.00 4.61
2784 3363 4.035909 ACAACAGTAAAACTAAAGCCACCG 59.964 41.667 0.00 0.00 0.00 4.94
2785 3364 3.812262 ACAGTAAAACTAAAGCCACCGT 58.188 40.909 0.00 0.00 0.00 4.83
2786 3365 3.811497 ACAGTAAAACTAAAGCCACCGTC 59.189 43.478 0.00 0.00 0.00 4.79
2787 3366 3.187842 CAGTAAAACTAAAGCCACCGTCC 59.812 47.826 0.00 0.00 0.00 4.79
2788 3367 2.351706 AAAACTAAAGCCACCGTCCA 57.648 45.000 0.00 0.00 0.00 4.02
2789 3368 1.892209 AAACTAAAGCCACCGTCCAG 58.108 50.000 0.00 0.00 0.00 3.86
2796 3375 2.034066 CCACCGTCCAGGCAACAT 59.966 61.111 0.00 0.00 46.52 2.71
2797 3376 2.040544 CCACCGTCCAGGCAACATC 61.041 63.158 0.00 0.00 46.52 3.06
2798 3377 1.003355 CACCGTCCAGGCAACATCT 60.003 57.895 0.00 0.00 46.52 2.90
2799 3378 1.003355 ACCGTCCAGGCAACATCTG 60.003 57.895 0.00 0.00 46.52 2.90
2800 3379 1.003355 CCGTCCAGGCAACATCTGT 60.003 57.895 0.00 0.00 41.41 3.41
2801 3380 1.021390 CCGTCCAGGCAACATCTGTC 61.021 60.000 0.00 0.00 41.41 3.51
2802 3381 1.354337 CGTCCAGGCAACATCTGTCG 61.354 60.000 0.00 0.00 41.41 4.35
2803 3382 1.375908 TCCAGGCAACATCTGTCGC 60.376 57.895 0.00 0.00 41.41 5.19
2804 3383 1.376424 CCAGGCAACATCTGTCGCT 60.376 57.895 0.00 0.00 41.41 4.93
2805 3384 0.108186 CCAGGCAACATCTGTCGCTA 60.108 55.000 0.00 0.00 41.41 4.26
2806 3385 1.002366 CAGGCAACATCTGTCGCTAC 58.998 55.000 0.00 0.00 41.41 3.58
2807 3386 0.898320 AGGCAACATCTGTCGCTACT 59.102 50.000 0.00 0.00 41.41 2.57
2808 3387 1.134965 AGGCAACATCTGTCGCTACTC 60.135 52.381 0.00 0.00 41.41 2.59
2809 3388 1.281899 GCAACATCTGTCGCTACTCC 58.718 55.000 0.00 0.00 0.00 3.85
2810 3389 1.134965 GCAACATCTGTCGCTACTCCT 60.135 52.381 0.00 0.00 0.00 3.69
2811 3390 2.099263 GCAACATCTGTCGCTACTCCTA 59.901 50.000 0.00 0.00 0.00 2.94
2812 3391 3.243569 GCAACATCTGTCGCTACTCCTAT 60.244 47.826 0.00 0.00 0.00 2.57
2813 3392 4.541779 CAACATCTGTCGCTACTCCTATC 58.458 47.826 0.00 0.00 0.00 2.08
2814 3393 4.093472 ACATCTGTCGCTACTCCTATCT 57.907 45.455 0.00 0.00 0.00 1.98
2815 3394 5.230323 ACATCTGTCGCTACTCCTATCTA 57.770 43.478 0.00 0.00 0.00 1.98
2816 3395 4.998672 ACATCTGTCGCTACTCCTATCTAC 59.001 45.833 0.00 0.00 0.00 2.59
2817 3396 4.959560 TCTGTCGCTACTCCTATCTACT 57.040 45.455 0.00 0.00 0.00 2.57
2818 3397 5.293319 TCTGTCGCTACTCCTATCTACTT 57.707 43.478 0.00 0.00 0.00 2.24
2819 3398 5.057819 TCTGTCGCTACTCCTATCTACTTG 58.942 45.833 0.00 0.00 0.00 3.16
2820 3399 5.032327 TGTCGCTACTCCTATCTACTTGA 57.968 43.478 0.00 0.00 0.00 3.02
2821 3400 5.622180 TGTCGCTACTCCTATCTACTTGAT 58.378 41.667 0.00 0.00 39.11 2.57
2822 3401 5.470437 TGTCGCTACTCCTATCTACTTGATG 59.530 44.000 0.00 0.00 36.65 3.07
2823 3402 5.470777 GTCGCTACTCCTATCTACTTGATGT 59.529 44.000 0.00 0.00 36.65 3.06
2824 3403 6.649973 GTCGCTACTCCTATCTACTTGATGTA 59.350 42.308 0.00 0.00 36.65 2.29
2826 3405 6.092944 CGCTACTCCTATCTACTTGATGTAGG 59.907 46.154 5.78 0.00 46.45 3.18
2827 3406 6.376018 GCTACTCCTATCTACTTGATGTAGGG 59.624 46.154 5.78 0.61 46.45 3.53
2828 3407 6.532119 ACTCCTATCTACTTGATGTAGGGA 57.468 41.667 5.78 4.39 46.45 4.20
2829 3408 7.109901 ACTCCTATCTACTTGATGTAGGGAT 57.890 40.000 5.78 0.00 46.45 3.85
2830 3409 6.951198 ACTCCTATCTACTTGATGTAGGGATG 59.049 42.308 5.78 3.13 46.45 3.51
2831 3410 5.717178 TCCTATCTACTTGATGTAGGGATGC 59.283 44.000 5.78 0.00 46.45 3.91
2832 3411 5.719085 CCTATCTACTTGATGTAGGGATGCT 59.281 44.000 5.78 0.00 46.45 3.79
2833 3412 4.944619 TCTACTTGATGTAGGGATGCTG 57.055 45.455 5.78 0.00 46.45 4.41
2834 3413 4.546674 TCTACTTGATGTAGGGATGCTGA 58.453 43.478 5.78 0.00 46.45 4.26
2835 3414 5.150715 TCTACTTGATGTAGGGATGCTGAT 58.849 41.667 5.78 0.00 46.45 2.90
2836 3415 6.314917 TCTACTTGATGTAGGGATGCTGATA 58.685 40.000 5.78 0.00 46.45 2.15
2837 3416 5.480642 ACTTGATGTAGGGATGCTGATAG 57.519 43.478 0.00 0.00 0.00 2.08
2838 3417 4.904251 ACTTGATGTAGGGATGCTGATAGT 59.096 41.667 0.00 0.00 0.00 2.12
2839 3418 5.011533 ACTTGATGTAGGGATGCTGATAGTC 59.988 44.000 0.00 0.00 0.00 2.59
2840 3419 4.745351 TGATGTAGGGATGCTGATAGTCT 58.255 43.478 0.00 0.00 0.00 3.24
2841 3420 4.525874 TGATGTAGGGATGCTGATAGTCTG 59.474 45.833 0.00 0.00 0.00 3.51
2842 3421 3.234353 TGTAGGGATGCTGATAGTCTGG 58.766 50.000 0.00 0.00 0.00 3.86
2843 3422 1.727062 AGGGATGCTGATAGTCTGGG 58.273 55.000 0.00 0.00 0.00 4.45
2844 3423 0.036022 GGGATGCTGATAGTCTGGGC 59.964 60.000 0.00 0.00 0.00 5.36
2845 3424 1.055040 GGATGCTGATAGTCTGGGCT 58.945 55.000 0.00 0.00 0.00 5.19
2846 3425 2.251818 GGATGCTGATAGTCTGGGCTA 58.748 52.381 0.00 0.00 0.00 3.93
2847 3426 2.634940 GGATGCTGATAGTCTGGGCTAA 59.365 50.000 0.00 0.00 0.00 3.09
2848 3427 3.262915 GGATGCTGATAGTCTGGGCTAAT 59.737 47.826 0.00 0.00 0.00 1.73
2849 3428 4.467795 GGATGCTGATAGTCTGGGCTAATA 59.532 45.833 0.00 0.00 0.00 0.98
2850 3429 5.395103 GGATGCTGATAGTCTGGGCTAATAG 60.395 48.000 0.00 0.00 0.00 1.73
2851 3430 3.259374 TGCTGATAGTCTGGGCTAATAGC 59.741 47.826 3.17 3.17 41.46 2.97
2852 3431 3.259374 GCTGATAGTCTGGGCTAATAGCA 59.741 47.826 14.76 0.00 44.75 3.49
2853 3432 4.262635 GCTGATAGTCTGGGCTAATAGCAA 60.263 45.833 14.76 0.69 44.75 3.91
2854 3433 5.743130 GCTGATAGTCTGGGCTAATAGCAAA 60.743 44.000 14.76 0.32 44.75 3.68
2855 3434 5.611374 TGATAGTCTGGGCTAATAGCAAAC 58.389 41.667 14.76 6.10 44.75 2.93
2856 3435 5.130311 TGATAGTCTGGGCTAATAGCAAACA 59.870 40.000 14.76 8.69 44.75 2.83
2857 3436 3.878778 AGTCTGGGCTAATAGCAAACAG 58.121 45.455 14.76 16.97 44.75 3.16
2858 3437 3.519510 AGTCTGGGCTAATAGCAAACAGA 59.480 43.478 21.23 21.23 44.75 3.41
2859 3438 3.873910 TCTGGGCTAATAGCAAACAGAC 58.126 45.455 21.23 2.67 44.75 3.51
2860 3439 2.945668 CTGGGCTAATAGCAAACAGACC 59.054 50.000 19.21 9.03 44.75 3.85
2861 3440 2.576191 TGGGCTAATAGCAAACAGACCT 59.424 45.455 14.76 0.00 44.75 3.85
2862 3441 3.206964 GGGCTAATAGCAAACAGACCTC 58.793 50.000 14.76 0.00 44.75 3.85
2863 3442 2.866762 GGCTAATAGCAAACAGACCTCG 59.133 50.000 14.76 0.00 44.75 4.63
2864 3443 2.285488 GCTAATAGCAAACAGACCTCGC 59.715 50.000 7.49 0.00 41.89 5.03
2865 3444 2.472695 AATAGCAAACAGACCTCGCA 57.527 45.000 0.00 0.00 0.00 5.10
2866 3445 2.015736 ATAGCAAACAGACCTCGCAG 57.984 50.000 0.00 0.00 0.00 5.18
2867 3446 0.670546 TAGCAAACAGACCTCGCAGC 60.671 55.000 0.00 0.00 0.00 5.25
2868 3447 2.970974 GCAAACAGACCTCGCAGCC 61.971 63.158 0.00 0.00 0.00 4.85
2869 3448 1.597854 CAAACAGACCTCGCAGCCA 60.598 57.895 0.00 0.00 0.00 4.75
2870 3449 1.302033 AAACAGACCTCGCAGCCAG 60.302 57.895 0.00 0.00 0.00 4.85
2871 3450 1.758440 AAACAGACCTCGCAGCCAGA 61.758 55.000 0.00 0.00 0.00 3.86
2872 3451 2.125753 CAGACCTCGCAGCCAGAC 60.126 66.667 0.00 0.00 0.00 3.51
2873 3452 3.386237 AGACCTCGCAGCCAGACC 61.386 66.667 0.00 0.00 0.00 3.85
2874 3453 3.386237 GACCTCGCAGCCAGACCT 61.386 66.667 0.00 0.00 0.00 3.85
2875 3454 2.037367 ACCTCGCAGCCAGACCTA 59.963 61.111 0.00 0.00 0.00 3.08
2876 3455 1.605058 GACCTCGCAGCCAGACCTAA 61.605 60.000 0.00 0.00 0.00 2.69
2877 3456 1.153549 CCTCGCAGCCAGACCTAAC 60.154 63.158 0.00 0.00 0.00 2.34
2878 3457 1.591703 CTCGCAGCCAGACCTAACA 59.408 57.895 0.00 0.00 0.00 2.41
2879 3458 0.176680 CTCGCAGCCAGACCTAACAT 59.823 55.000 0.00 0.00 0.00 2.71
2880 3459 0.175760 TCGCAGCCAGACCTAACATC 59.824 55.000 0.00 0.00 0.00 3.06
2881 3460 0.176680 CGCAGCCAGACCTAACATCT 59.823 55.000 0.00 0.00 0.00 2.90
2882 3461 1.409064 CGCAGCCAGACCTAACATCTA 59.591 52.381 0.00 0.00 0.00 1.98
2883 3462 2.159099 CGCAGCCAGACCTAACATCTAA 60.159 50.000 0.00 0.00 0.00 2.10
2884 3463 3.462021 GCAGCCAGACCTAACATCTAAG 58.538 50.000 0.00 0.00 0.00 2.18
2885 3464 3.133003 GCAGCCAGACCTAACATCTAAGA 59.867 47.826 0.00 0.00 0.00 2.10
2886 3465 4.688021 CAGCCAGACCTAACATCTAAGAC 58.312 47.826 0.00 0.00 0.00 3.01
2887 3466 3.381908 AGCCAGACCTAACATCTAAGACG 59.618 47.826 0.00 0.00 0.00 4.18
2888 3467 3.130693 GCCAGACCTAACATCTAAGACGT 59.869 47.826 0.00 0.00 0.00 4.34
2889 3468 4.673441 CCAGACCTAACATCTAAGACGTG 58.327 47.826 0.00 0.00 0.00 4.49
2890 3469 4.398358 CCAGACCTAACATCTAAGACGTGA 59.602 45.833 0.00 0.00 0.00 4.35
2891 3470 5.449314 CCAGACCTAACATCTAAGACGTGAG 60.449 48.000 0.00 0.00 0.00 3.51
2892 3471 4.641094 AGACCTAACATCTAAGACGTGAGG 59.359 45.833 0.00 0.00 37.31 3.86
2893 3472 4.342359 ACCTAACATCTAAGACGTGAGGT 58.658 43.478 0.00 0.20 39.34 3.85
2894 3473 4.398673 ACCTAACATCTAAGACGTGAGGTC 59.601 45.833 0.00 0.00 39.95 3.85
2895 3474 6.611898 ACCTAACATCTAAGACGTGAGGTCC 61.612 48.000 0.00 0.00 39.95 4.46
2909 3488 3.468063 GTCCCAACCAGGACGTCT 58.532 61.111 16.46 0.00 46.57 4.18
2910 3489 1.004918 GTCCCAACCAGGACGTCTG 60.005 63.158 16.46 11.33 46.57 3.51
2911 3490 2.358737 CCCAACCAGGACGTCTGC 60.359 66.667 16.46 0.00 42.05 4.26
2912 3491 2.358737 CCAACCAGGACGTCTGCC 60.359 66.667 16.46 0.00 42.05 4.85
2913 3492 2.738521 CAACCAGGACGTCTGCCG 60.739 66.667 16.46 3.34 42.05 5.69
2914 3493 2.915659 AACCAGGACGTCTGCCGA 60.916 61.111 16.46 0.00 42.05 5.54
2915 3494 2.932234 AACCAGGACGTCTGCCGAG 61.932 63.158 16.46 1.54 42.05 4.63
2916 3495 3.374402 CCAGGACGTCTGCCGAGT 61.374 66.667 16.46 0.00 42.05 4.18
2917 3496 2.044555 CCAGGACGTCTGCCGAGTA 61.045 63.158 16.46 0.00 42.05 2.59
2918 3497 1.384989 CCAGGACGTCTGCCGAGTAT 61.385 60.000 16.46 0.00 42.05 2.12
2919 3498 0.248661 CAGGACGTCTGCCGAGTATG 60.249 60.000 16.46 0.00 40.70 2.39
2920 3499 0.393944 AGGACGTCTGCCGAGTATGA 60.394 55.000 16.46 0.00 40.70 2.15
2921 3500 0.029567 GGACGTCTGCCGAGTATGAG 59.970 60.000 16.46 0.00 40.70 2.90
2922 3501 0.029567 GACGTCTGCCGAGTATGAGG 59.970 60.000 8.70 0.00 40.70 3.86
2928 3507 3.628989 CCGAGTATGAGGCACCCA 58.371 61.111 0.00 0.00 0.00 4.51
2929 3508 1.144057 CCGAGTATGAGGCACCCAC 59.856 63.158 0.00 0.00 0.00 4.61
2930 3509 1.144057 CGAGTATGAGGCACCCACC 59.856 63.158 0.00 0.00 0.00 4.61
2931 3510 1.613317 CGAGTATGAGGCACCCACCA 61.613 60.000 0.00 0.00 0.00 4.17
2932 3511 0.179000 GAGTATGAGGCACCCACCAG 59.821 60.000 0.00 0.00 0.00 4.00
2933 3512 0.547712 AGTATGAGGCACCCACCAGT 60.548 55.000 0.00 0.00 0.00 4.00
2934 3513 0.107654 GTATGAGGCACCCACCAGTC 60.108 60.000 0.00 0.00 0.00 3.51
2935 3514 1.271840 TATGAGGCACCCACCAGTCC 61.272 60.000 0.00 0.00 0.00 3.85
2936 3515 4.394712 GAGGCACCCACCAGTCCG 62.395 72.222 0.00 0.00 0.00 4.79
2942 3521 3.467226 CCCACCAGTCCGGCGTAT 61.467 66.667 6.01 0.00 39.03 3.06
2943 3522 2.582436 CCACCAGTCCGGCGTATT 59.418 61.111 6.01 0.00 39.03 1.89
2944 3523 1.520787 CCACCAGTCCGGCGTATTC 60.521 63.158 6.01 0.00 39.03 1.75
2945 3524 1.520787 CACCAGTCCGGCGTATTCC 60.521 63.158 6.01 0.00 39.03 3.01
2946 3525 1.684734 ACCAGTCCGGCGTATTCCT 60.685 57.895 6.01 0.00 39.03 3.36
2947 3526 1.067582 CCAGTCCGGCGTATTCCTC 59.932 63.158 6.01 0.00 0.00 3.71
2948 3527 1.672854 CCAGTCCGGCGTATTCCTCA 61.673 60.000 6.01 0.00 0.00 3.86
2949 3528 0.174845 CAGTCCGGCGTATTCCTCAA 59.825 55.000 6.01 0.00 0.00 3.02
2950 3529 0.175073 AGTCCGGCGTATTCCTCAAC 59.825 55.000 6.01 0.00 0.00 3.18
2951 3530 0.175073 GTCCGGCGTATTCCTCAACT 59.825 55.000 6.01 0.00 0.00 3.16
2952 3531 1.406539 GTCCGGCGTATTCCTCAACTA 59.593 52.381 6.01 0.00 0.00 2.24
2953 3532 1.679680 TCCGGCGTATTCCTCAACTAG 59.320 52.381 6.01 0.00 0.00 2.57
2962 3541 4.504132 CTCAACTAGGACGCCTGC 57.496 61.111 8.44 0.00 34.61 4.85
2963 3542 1.153549 CTCAACTAGGACGCCTGCC 60.154 63.158 8.44 0.00 34.61 4.85
2964 3543 2.509336 CAACTAGGACGCCTGCCG 60.509 66.667 8.44 0.91 44.21 5.69
2965 3544 3.771160 AACTAGGACGCCTGCCGG 61.771 66.667 0.00 0.00 42.52 6.13
2968 3547 4.445710 TAGGACGCCTGCCGGGTA 62.446 66.667 2.18 0.00 42.52 3.69
2969 3548 3.744003 TAGGACGCCTGCCGGGTAT 62.744 63.158 2.18 0.00 42.52 2.73
2970 3549 4.910585 GGACGCCTGCCGGGTATG 62.911 72.222 2.18 0.00 42.52 2.39
2971 3550 3.845259 GACGCCTGCCGGGTATGA 61.845 66.667 2.18 0.00 42.52 2.15
2972 3551 3.792053 GACGCCTGCCGGGTATGAG 62.792 68.421 2.18 0.00 42.52 2.90
2973 3552 4.609018 CGCCTGCCGGGTATGAGG 62.609 72.222 2.18 0.00 37.43 3.86
2997 3576 2.283388 CAGCCACCTGCCACCAAT 60.283 61.111 0.00 0.00 42.71 3.16
2998 3577 2.036256 AGCCACCTGCCACCAATC 59.964 61.111 0.00 0.00 42.71 2.67
2999 3578 3.070576 GCCACCTGCCACCAATCC 61.071 66.667 0.00 0.00 0.00 3.01
3000 3579 2.440147 CCACCTGCCACCAATCCA 59.560 61.111 0.00 0.00 0.00 3.41
3001 3580 1.000739 CCACCTGCCACCAATCCAT 59.999 57.895 0.00 0.00 0.00 3.41
3002 3581 1.039233 CCACCTGCCACCAATCCATC 61.039 60.000 0.00 0.00 0.00 3.51
3003 3582 0.033796 CACCTGCCACCAATCCATCT 60.034 55.000 0.00 0.00 0.00 2.90
3004 3583 0.706433 ACCTGCCACCAATCCATCTT 59.294 50.000 0.00 0.00 0.00 2.40
3005 3584 1.341383 ACCTGCCACCAATCCATCTTC 60.341 52.381 0.00 0.00 0.00 2.87
3006 3585 1.341285 CCTGCCACCAATCCATCTTCA 60.341 52.381 0.00 0.00 0.00 3.02
3007 3586 2.449464 CTGCCACCAATCCATCTTCAA 58.551 47.619 0.00 0.00 0.00 2.69
3008 3587 3.028850 CTGCCACCAATCCATCTTCAAT 58.971 45.455 0.00 0.00 0.00 2.57
3009 3588 2.761767 TGCCACCAATCCATCTTCAATG 59.238 45.455 0.00 0.00 0.00 2.82
3010 3589 2.762327 GCCACCAATCCATCTTCAATGT 59.238 45.455 0.00 0.00 0.00 2.71
3011 3590 3.196254 GCCACCAATCCATCTTCAATGTT 59.804 43.478 0.00 0.00 0.00 2.71
3012 3591 4.751060 CCACCAATCCATCTTCAATGTTG 58.249 43.478 0.00 0.00 0.00 3.33
3013 3592 4.221262 CCACCAATCCATCTTCAATGTTGT 59.779 41.667 0.00 0.00 0.00 3.32
3014 3593 5.418524 CCACCAATCCATCTTCAATGTTGTA 59.581 40.000 0.00 0.00 0.00 2.41
3015 3594 6.324819 CACCAATCCATCTTCAATGTTGTAC 58.675 40.000 0.00 0.00 0.00 2.90
3016 3595 6.151648 CACCAATCCATCTTCAATGTTGTACT 59.848 38.462 0.00 0.00 0.00 2.73
3017 3596 6.151648 ACCAATCCATCTTCAATGTTGTACTG 59.848 38.462 0.00 0.00 0.00 2.74
3018 3597 5.824904 ATCCATCTTCAATGTTGTACTGC 57.175 39.130 0.00 0.00 0.00 4.40
3019 3598 4.910195 TCCATCTTCAATGTTGTACTGCT 58.090 39.130 0.00 0.00 0.00 4.24
3020 3599 4.696877 TCCATCTTCAATGTTGTACTGCTG 59.303 41.667 0.00 0.00 0.00 4.41
3021 3600 4.409570 CATCTTCAATGTTGTACTGCTGC 58.590 43.478 0.00 0.00 0.00 5.25
3022 3601 3.475575 TCTTCAATGTTGTACTGCTGCA 58.524 40.909 0.88 0.88 0.00 4.41
3023 3602 4.074259 TCTTCAATGTTGTACTGCTGCAT 58.926 39.130 1.31 0.00 0.00 3.96
3024 3603 4.154737 TCTTCAATGTTGTACTGCTGCATC 59.845 41.667 1.31 0.00 0.00 3.91
3025 3604 3.410508 TCAATGTTGTACTGCTGCATCA 58.589 40.909 1.31 0.31 0.00 3.07
3026 3605 3.189080 TCAATGTTGTACTGCTGCATCAC 59.811 43.478 1.31 4.77 0.00 3.06
3027 3606 2.549064 TGTTGTACTGCTGCATCACT 57.451 45.000 1.31 0.00 0.00 3.41
3028 3607 3.676291 TGTTGTACTGCTGCATCACTA 57.324 42.857 1.31 0.00 0.00 2.74
3029 3608 3.588955 TGTTGTACTGCTGCATCACTAG 58.411 45.455 1.31 0.00 0.00 2.57
3030 3609 3.006859 TGTTGTACTGCTGCATCACTAGT 59.993 43.478 1.31 0.00 0.00 2.57
3031 3610 3.236632 TGTACTGCTGCATCACTAGTG 57.763 47.619 17.17 17.17 0.00 2.74
3032 3611 1.929836 GTACTGCTGCATCACTAGTGC 59.070 52.381 18.45 7.44 42.81 4.40
3038 3617 2.099141 TGCATCACTAGTGCAGAACC 57.901 50.000 18.45 3.83 46.76 3.62
3039 3618 1.002366 GCATCACTAGTGCAGAACCG 58.998 55.000 18.45 2.38 42.08 4.44
3040 3619 1.645034 CATCACTAGTGCAGAACCGG 58.355 55.000 18.45 0.00 0.00 5.28
3041 3620 0.537188 ATCACTAGTGCAGAACCGGG 59.463 55.000 18.45 0.00 0.00 5.73
3042 3621 1.741770 CACTAGTGCAGAACCGGGC 60.742 63.158 10.54 0.00 0.00 6.13
3043 3622 2.214216 ACTAGTGCAGAACCGGGCA 61.214 57.895 6.32 1.81 37.77 5.36
3044 3623 1.003839 CTAGTGCAGAACCGGGCAA 60.004 57.895 6.32 0.00 42.45 4.52
3045 3624 0.392998 CTAGTGCAGAACCGGGCAAT 60.393 55.000 6.32 7.58 42.45 3.56
3046 3625 0.906066 TAGTGCAGAACCGGGCAATA 59.094 50.000 6.32 6.43 42.45 1.90
3047 3626 0.392998 AGTGCAGAACCGGGCAATAG 60.393 55.000 6.32 0.00 42.45 1.73
3048 3627 1.748879 TGCAGAACCGGGCAATAGC 60.749 57.895 6.32 2.35 37.03 2.97
3049 3628 1.748879 GCAGAACCGGGCAATAGCA 60.749 57.895 6.32 0.00 44.61 3.49
3050 3629 1.993369 GCAGAACCGGGCAATAGCAC 61.993 60.000 6.32 0.00 44.61 4.40
3051 3630 1.077716 AGAACCGGGCAATAGCACC 60.078 57.895 6.32 0.00 42.77 5.01
3055 3634 2.437716 CGGGCAATAGCACCGGTT 60.438 61.111 2.97 0.00 45.12 4.44
3056 3635 2.469516 CGGGCAATAGCACCGGTTC 61.470 63.158 2.97 0.00 45.12 3.62
3057 3636 2.469516 GGGCAATAGCACCGGTTCG 61.470 63.158 2.97 0.00 44.61 3.95
3058 3637 1.743995 GGCAATAGCACCGGTTCGT 60.744 57.895 2.97 0.00 44.61 3.85
3059 3638 0.460635 GGCAATAGCACCGGTTCGTA 60.461 55.000 2.97 0.00 44.61 3.43
3060 3639 1.361793 GCAATAGCACCGGTTCGTAA 58.638 50.000 2.97 0.00 41.58 3.18
3061 3640 1.326548 GCAATAGCACCGGTTCGTAAG 59.673 52.381 2.97 0.00 41.58 2.34
3062 3641 1.931172 CAATAGCACCGGTTCGTAAGG 59.069 52.381 2.97 0.00 38.47 2.69
3063 3642 1.188863 ATAGCACCGGTTCGTAAGGT 58.811 50.000 2.97 0.00 39.12 3.50
3064 3643 0.527565 TAGCACCGGTTCGTAAGGTC 59.472 55.000 2.97 0.00 35.85 3.85
3065 3644 1.739196 GCACCGGTTCGTAAGGTCC 60.739 63.158 2.97 0.00 35.85 4.46
3066 3645 1.969862 CACCGGTTCGTAAGGTCCT 59.030 57.895 2.97 0.00 35.85 3.85
3067 3646 0.319405 CACCGGTTCGTAAGGTCCTT 59.681 55.000 2.97 9.62 35.85 3.36
3068 3647 1.051008 ACCGGTTCGTAAGGTCCTTT 58.949 50.000 10.04 0.00 31.69 3.11
3069 3648 2.029110 CACCGGTTCGTAAGGTCCTTTA 60.029 50.000 10.04 0.00 35.85 1.85
3070 3649 2.232208 ACCGGTTCGTAAGGTCCTTTAG 59.768 50.000 10.04 4.60 31.69 1.85
3071 3650 2.232208 CCGGTTCGTAAGGTCCTTTAGT 59.768 50.000 10.04 0.00 38.47 2.24
3072 3651 3.248266 CGGTTCGTAAGGTCCTTTAGTG 58.752 50.000 10.04 0.00 38.47 2.74
3073 3652 2.998670 GGTTCGTAAGGTCCTTTAGTGC 59.001 50.000 10.04 0.00 38.47 4.40
3074 3653 2.998670 GTTCGTAAGGTCCTTTAGTGCC 59.001 50.000 10.04 0.00 38.47 5.01
3075 3654 1.203052 TCGTAAGGTCCTTTAGTGCCG 59.797 52.381 10.04 3.70 38.47 5.69
3076 3655 1.738030 CGTAAGGTCCTTTAGTGCCGG 60.738 57.143 10.04 0.00 0.00 6.13
3077 3656 1.277273 GTAAGGTCCTTTAGTGCCGGT 59.723 52.381 10.04 0.00 0.00 5.28
3078 3657 0.769247 AAGGTCCTTTAGTGCCGGTT 59.231 50.000 1.90 0.00 0.00 4.44
3079 3658 0.323957 AGGTCCTTTAGTGCCGGTTC 59.676 55.000 1.90 0.00 0.00 3.62
3080 3659 0.675837 GGTCCTTTAGTGCCGGTTCC 60.676 60.000 1.90 0.00 0.00 3.62
3081 3660 0.035739 GTCCTTTAGTGCCGGTTCCA 59.964 55.000 1.90 0.00 0.00 3.53
3082 3661 0.988832 TCCTTTAGTGCCGGTTCCAT 59.011 50.000 1.90 0.00 0.00 3.41
3083 3662 2.093341 GTCCTTTAGTGCCGGTTCCATA 60.093 50.000 1.90 0.00 0.00 2.74
3084 3663 2.572556 TCCTTTAGTGCCGGTTCCATAA 59.427 45.455 1.90 0.00 0.00 1.90
3085 3664 2.681344 CCTTTAGTGCCGGTTCCATAAC 59.319 50.000 1.90 0.00 34.66 1.89
3094 3673 2.406596 GGTTCCATAACCGGCACTAA 57.593 50.000 0.00 0.00 45.61 2.24
3095 3674 2.713877 GGTTCCATAACCGGCACTAAA 58.286 47.619 0.00 0.00 45.61 1.85
3096 3675 2.681344 GGTTCCATAACCGGCACTAAAG 59.319 50.000 0.00 0.00 45.61 1.85
3097 3676 3.340928 GTTCCATAACCGGCACTAAAGT 58.659 45.455 0.00 0.00 0.00 2.66
3098 3677 4.506758 GTTCCATAACCGGCACTAAAGTA 58.493 43.478 0.00 0.00 0.00 2.24
3099 3678 5.121105 GTTCCATAACCGGCACTAAAGTAT 58.879 41.667 0.00 0.00 0.00 2.12
3100 3679 4.699637 TCCATAACCGGCACTAAAGTATG 58.300 43.478 0.00 0.00 0.00 2.39
3101 3680 3.813166 CCATAACCGGCACTAAAGTATGG 59.187 47.826 0.00 2.73 0.00 2.74
3102 3681 4.448210 CATAACCGGCACTAAAGTATGGT 58.552 43.478 0.00 0.00 0.00 3.55
3103 3682 2.685850 ACCGGCACTAAAGTATGGTC 57.314 50.000 0.00 0.00 0.00 4.02
3104 3683 1.903860 ACCGGCACTAAAGTATGGTCA 59.096 47.619 0.00 0.00 0.00 4.02
3105 3684 2.277084 CCGGCACTAAAGTATGGTCAC 58.723 52.381 0.00 0.00 0.00 3.67
3106 3685 2.093658 CCGGCACTAAAGTATGGTCACT 60.094 50.000 0.00 0.00 0.00 3.41
3107 3686 3.131577 CCGGCACTAAAGTATGGTCACTA 59.868 47.826 0.00 0.00 0.00 2.74
3108 3687 4.382254 CCGGCACTAAAGTATGGTCACTAA 60.382 45.833 0.00 0.00 0.00 2.24
3109 3688 5.172934 CGGCACTAAAGTATGGTCACTAAA 58.827 41.667 0.00 0.00 0.00 1.85
3110 3689 5.291128 CGGCACTAAAGTATGGTCACTAAAG 59.709 44.000 0.00 0.00 0.00 1.85
3111 3690 5.064834 GGCACTAAAGTATGGTCACTAAAGC 59.935 44.000 0.00 0.00 0.00 3.51
3112 3691 5.064834 GCACTAAAGTATGGTCACTAAAGCC 59.935 44.000 0.00 0.00 0.00 4.35
3113 3692 5.585047 CACTAAAGTATGGTCACTAAAGCCC 59.415 44.000 0.00 0.00 0.00 5.19
3114 3693 3.646736 AAGTATGGTCACTAAAGCCCC 57.353 47.619 0.00 0.00 0.00 5.80
3115 3694 1.844497 AGTATGGTCACTAAAGCCCCC 59.156 52.381 0.00 0.00 0.00 5.40
3132 3711 1.278537 CCCCCTTTAGTACCGGTTCA 58.721 55.000 15.04 0.00 0.00 3.18
3133 3712 1.208776 CCCCCTTTAGTACCGGTTCAG 59.791 57.143 15.04 0.52 0.00 3.02
3134 3713 1.406477 CCCCTTTAGTACCGGTTCAGC 60.406 57.143 15.04 0.59 0.00 4.26
3135 3714 1.276989 CCCTTTAGTACCGGTTCAGCA 59.723 52.381 15.04 0.00 0.00 4.41
3136 3715 2.344025 CCTTTAGTACCGGTTCAGCAC 58.656 52.381 15.04 3.84 0.00 4.40
3137 3716 1.990563 CTTTAGTACCGGTTCAGCACG 59.009 52.381 15.04 0.00 0.00 5.34
3138 3717 1.246649 TTAGTACCGGTTCAGCACGA 58.753 50.000 15.04 0.00 0.00 4.35
3139 3718 1.246649 TAGTACCGGTTCAGCACGAA 58.753 50.000 15.04 0.00 0.00 3.85
3152 3731 3.967734 CACGAACCGGTGCTAAATG 57.032 52.632 8.52 0.00 0.00 2.32
3153 3732 0.446222 CACGAACCGGTGCTAAATGG 59.554 55.000 8.52 0.00 0.00 3.16
3154 3733 1.303091 ACGAACCGGTGCTAAATGGC 61.303 55.000 8.52 0.00 0.00 4.40
3155 3734 1.302383 CGAACCGGTGCTAAATGGCA 61.302 55.000 8.52 0.00 40.15 4.92
3156 3735 0.885196 GAACCGGTGCTAAATGGCAA 59.115 50.000 8.52 0.00 44.18 4.52
3157 3736 0.601057 AACCGGTGCTAAATGGCAAC 59.399 50.000 8.52 0.00 45.46 4.17
3158 3737 1.248101 ACCGGTGCTAAATGGCAACC 61.248 55.000 6.12 0.00 46.10 3.77
3159 3738 1.247419 CCGGTGCTAAATGGCAACCA 61.247 55.000 0.96 0.00 46.10 3.67
3160 3739 0.109319 CGGTGCTAAATGGCAACCAC 60.109 55.000 0.96 2.13 46.10 4.16
3161 3740 0.109319 GGTGCTAAATGGCAACCACG 60.109 55.000 0.00 0.00 43.41 4.94
3162 3741 0.596082 GTGCTAAATGGCAACCACGT 59.404 50.000 0.00 0.00 44.18 4.49
3163 3742 0.595588 TGCTAAATGGCAACCACGTG 59.404 50.000 9.08 9.08 39.43 4.49
3164 3743 0.109319 GCTAAATGGCAACCACGTGG 60.109 55.000 32.83 32.83 35.80 4.94
3165 3744 0.109319 CTAAATGGCAACCACGTGGC 60.109 55.000 34.26 19.99 44.09 5.01
3170 3749 4.012895 GCAACCACGTGGCACGAG 62.013 66.667 42.65 34.61 46.05 4.18
3171 3750 4.012895 CAACCACGTGGCACGAGC 62.013 66.667 42.65 4.67 46.05 5.03
3182 3761 4.760047 CACGAGCCAACTCCGGGG 62.760 72.222 0.00 0.00 40.03 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.851214 AGGAGCGGGAGGAGGAGC 62.851 72.222 0.00 0.00 0.00 4.70
386 408 2.049433 AGGACGACGACGCCTTTG 60.049 61.111 14.79 0.00 40.82 2.77
387 409 2.257676 GAGGACGACGACGCCTTT 59.742 61.111 19.48 4.18 42.53 3.11
388 410 4.099170 CGAGGACGACGACGCCTT 62.099 66.667 19.48 1.45 42.53 4.35
458 489 2.683933 CCCGTGCTAGACCCCTGT 60.684 66.667 0.00 0.00 0.00 4.00
480 511 0.541998 TCCTTCTCCTCCTTCACGCA 60.542 55.000 0.00 0.00 0.00 5.24
527 558 2.970324 GCGAAGTTGGTGCCGTCA 60.970 61.111 0.00 0.00 0.00 4.35
535 566 1.294659 GCTGACAGAGGCGAAGTTGG 61.295 60.000 6.65 0.00 0.00 3.77
537 568 4.683432 GCTGACAGAGGCGAAGTT 57.317 55.556 6.65 0.00 0.00 2.66
637 672 6.463360 AGGACAAATATTTTGGCGAAACAAT 58.537 32.000 1.09 0.00 0.00 2.71
638 673 5.848406 AGGACAAATATTTTGGCGAAACAA 58.152 33.333 1.09 0.00 0.00 2.83
639 674 5.461032 AGGACAAATATTTTGGCGAAACA 57.539 34.783 1.09 0.00 0.00 2.83
640 675 7.044314 CGAATAGGACAAATATTTTGGCGAAAC 60.044 37.037 1.09 0.00 0.00 2.78
641 676 6.970043 CGAATAGGACAAATATTTTGGCGAAA 59.030 34.615 1.66 1.66 0.00 3.46
644 679 4.675114 GCGAATAGGACAAATATTTTGGCG 59.325 41.667 0.00 0.00 0.00 5.69
645 680 4.982295 GGCGAATAGGACAAATATTTTGGC 59.018 41.667 0.00 1.32 0.00 4.52
646 681 6.142818 TGGCGAATAGGACAAATATTTTGG 57.857 37.500 0.00 0.00 0.00 3.28
691 726 5.220322 CGCGCCTGTTTTAAACTTTCTTTTT 60.220 36.000 9.33 0.00 0.00 1.94
693 728 3.794564 CGCGCCTGTTTTAAACTTTCTTT 59.205 39.130 9.33 0.00 0.00 2.52
696 731 2.717519 GTCGCGCCTGTTTTAAACTTTC 59.282 45.455 0.00 0.00 0.00 2.62
699 734 0.589708 GGTCGCGCCTGTTTTAAACT 59.410 50.000 0.00 0.00 0.00 2.66
700 735 0.723459 CGGTCGCGCCTGTTTTAAAC 60.723 55.000 15.78 0.20 34.25 2.01
719 762 2.345760 TTCCCAGCCGACGTCCTAC 61.346 63.158 10.58 0.00 0.00 3.18
721 764 3.692406 GTTCCCAGCCGACGTCCT 61.692 66.667 10.58 0.00 0.00 3.85
760 804 3.202706 GAGGGCGAATTGGCGGTC 61.203 66.667 6.35 1.94 46.04 4.79
776 820 3.164576 CGAAAAGTCGCCGCATGA 58.835 55.556 0.00 0.00 41.08 3.07
787 831 5.004922 AGAACATCTCTAGCCTCGAAAAG 57.995 43.478 0.00 0.00 30.22 2.27
796 840 6.140110 GTCTCGTCATTAGAACATCTCTAGC 58.860 44.000 0.00 0.00 37.93 3.42
797 841 7.225734 TCTGTCTCGTCATTAGAACATCTCTAG 59.774 40.741 0.00 0.00 37.93 2.43
798 842 7.048512 TCTGTCTCGTCATTAGAACATCTCTA 58.951 38.462 0.00 0.00 35.41 2.43
799 843 5.883115 TCTGTCTCGTCATTAGAACATCTCT 59.117 40.000 0.00 0.00 38.28 3.10
800 844 6.125327 TCTGTCTCGTCATTAGAACATCTC 57.875 41.667 0.00 0.00 0.00 2.75
801 845 5.449862 GCTCTGTCTCGTCATTAGAACATCT 60.450 44.000 0.00 0.00 0.00 2.90
802 846 4.737765 GCTCTGTCTCGTCATTAGAACATC 59.262 45.833 0.00 0.00 0.00 3.06
803 847 4.400884 AGCTCTGTCTCGTCATTAGAACAT 59.599 41.667 0.00 0.00 0.00 2.71
804 848 3.759086 AGCTCTGTCTCGTCATTAGAACA 59.241 43.478 0.00 0.00 0.00 3.18
805 849 4.101942 CAGCTCTGTCTCGTCATTAGAAC 58.898 47.826 0.00 0.00 0.00 3.01
806 850 3.759086 ACAGCTCTGTCTCGTCATTAGAA 59.241 43.478 0.00 0.00 40.24 2.10
807 851 3.348119 ACAGCTCTGTCTCGTCATTAGA 58.652 45.455 0.00 0.00 40.24 2.10
808 852 3.773860 ACAGCTCTGTCTCGTCATTAG 57.226 47.619 0.00 0.00 40.24 1.73
809 853 3.367395 CCAACAGCTCTGTCTCGTCATTA 60.367 47.826 2.68 0.00 44.13 1.90
810 854 2.611473 CCAACAGCTCTGTCTCGTCATT 60.611 50.000 2.68 0.00 44.13 2.57
811 855 1.067283 CCAACAGCTCTGTCTCGTCAT 60.067 52.381 2.68 0.00 44.13 3.06
812 856 0.315251 CCAACAGCTCTGTCTCGTCA 59.685 55.000 2.68 0.00 44.13 4.35
822 866 1.452833 GGCCATCCTCCAACAGCTC 60.453 63.158 0.00 0.00 0.00 4.09
896 940 1.828979 TGATTACAAAAGGGACGCCC 58.171 50.000 6.80 6.80 45.90 6.13
902 946 8.507249 CAGTAGAAGACTTTGATTACAAAAGGG 58.493 37.037 0.00 0.00 43.92 3.95
905 949 8.974060 ACCAGTAGAAGACTTTGATTACAAAA 57.026 30.769 0.00 0.00 43.92 2.44
918 962 3.870633 AACGGATGACCAGTAGAAGAC 57.129 47.619 0.00 0.00 35.59 3.01
927 971 6.230472 CAGGATGATAATAAACGGATGACCA 58.770 40.000 0.00 0.00 39.69 4.02
942 994 4.513442 GCCCGTATTTATGCAGGATGATA 58.487 43.478 0.00 0.00 39.69 2.15
946 998 1.808411 CGCCCGTATTTATGCAGGAT 58.192 50.000 0.00 0.00 0.00 3.24
947 999 0.882927 GCGCCCGTATTTATGCAGGA 60.883 55.000 0.00 0.00 0.00 3.86
948 1000 1.163420 TGCGCCCGTATTTATGCAGG 61.163 55.000 4.18 0.00 0.00 4.85
950 1002 1.767127 CGTGCGCCCGTATTTATGCA 61.767 55.000 4.18 0.00 0.00 3.96
972 1033 1.996191 CTCGTTTTGCTCCTGCTACTC 59.004 52.381 0.00 0.00 40.48 2.59
975 1036 2.143122 CAACTCGTTTTGCTCCTGCTA 58.857 47.619 0.00 0.00 40.48 3.49
976 1037 0.947244 CAACTCGTTTTGCTCCTGCT 59.053 50.000 0.00 0.00 40.48 4.24
977 1038 3.461843 CAACTCGTTTTGCTCCTGC 57.538 52.632 0.00 0.00 40.20 4.85
1004 1077 0.997196 GAAGAACCATACGGACGCAC 59.003 55.000 0.00 0.00 35.59 5.34
1020 1093 1.760268 GCGATGCCAGCGAGAAGAAG 61.760 60.000 6.51 0.00 0.00 2.85
1056 1129 2.126071 CGGACACTGACGGCGAAT 60.126 61.111 16.62 0.00 0.00 3.34
1063 1136 2.574399 GAGGAGGCGGACACTGAC 59.426 66.667 0.00 0.00 0.00 3.51
1385 1483 3.251004 CGACAGGACATGATCGATCAGTA 59.749 47.826 30.11 10.18 40.64 2.74
1424 1523 4.101448 GCCTCGTCCCCTGCATGT 62.101 66.667 0.00 0.00 0.00 3.21
1765 2002 2.125912 GCACGTCGATGCCTGAGT 60.126 61.111 4.06 0.00 39.86 3.41
1830 2091 1.006391 CGGCACAACGACGATAATGTC 60.006 52.381 0.00 0.00 35.47 3.06
1832 2093 0.996462 ACGGCACAACGACGATAATG 59.004 50.000 0.00 0.00 37.61 1.90
1838 2099 2.657296 AGACACGGCACAACGACG 60.657 61.111 0.00 0.00 37.61 5.12
1839 2100 2.928361 CAGACACGGCACAACGAC 59.072 61.111 0.00 0.00 37.61 4.34
1841 2117 3.227372 CTGCAGACACGGCACAACG 62.227 63.158 8.42 0.00 36.11 4.10
2070 2645 0.321671 GCCCTCTGCCGCAGATTATA 59.678 55.000 23.14 0.89 39.92 0.98
2148 2723 0.179029 CCAACACCAACCTCGTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
2174 2749 1.205417 TCCGAACCACCTTAATCCGAC 59.795 52.381 0.00 0.00 0.00 4.79
2245 2820 1.454201 TTTGCGTGACCAACTGTTGA 58.546 45.000 21.49 0.00 0.00 3.18
2313 2891 9.657419 ATTTTAAAAAGATGCATTACTTCCCTG 57.343 29.630 4.44 0.00 0.00 4.45
2376 2954 6.658816 TGCACTTGAACTTGTTATATGGACAT 59.341 34.615 0.00 0.00 0.00 3.06
2424 3002 1.000163 TGGCGTGTTTGTGTTGTTGTT 60.000 42.857 0.00 0.00 0.00 2.83
2487 3065 0.931005 GGATCGGAATGCTTCGTGTC 59.069 55.000 0.00 0.00 0.00 3.67
2498 3076 5.995565 TCTAGAAAACTTCAGGATCGGAA 57.004 39.130 0.00 0.00 0.00 4.30
2510 3088 8.870075 AGATGGCAACTTTATTCTAGAAAACT 57.130 30.769 9.71 0.00 37.61 2.66
2511 3089 8.730680 TGAGATGGCAACTTTATTCTAGAAAAC 58.269 33.333 9.71 0.00 37.61 2.43
2551 3130 3.641437 TTTTCGGATGGCAAGTTTCAG 57.359 42.857 0.00 0.00 0.00 3.02
2575 3154 2.221169 TCAGTTGTCAAGCATGTCCAC 58.779 47.619 0.00 0.00 0.00 4.02
2576 3155 2.636647 TCAGTTGTCAAGCATGTCCA 57.363 45.000 0.00 0.00 0.00 4.02
2578 3157 4.558538 AACTTCAGTTGTCAAGCATGTC 57.441 40.909 0.00 0.00 36.80 3.06
2594 3173 2.099062 CGCGAGCATGGCAACTTC 59.901 61.111 0.00 0.00 41.24 3.01
2600 3179 1.358725 TTTAGTGACGCGAGCATGGC 61.359 55.000 15.93 0.00 36.02 4.40
2605 3184 0.179248 GCAAGTTTAGTGACGCGAGC 60.179 55.000 15.93 4.68 0.00 5.03
2631 3210 3.466836 GGACACATGACAACTCTGAACA 58.533 45.455 0.00 0.00 0.00 3.18
2636 3215 1.873903 GCACGGACACATGACAACTCT 60.874 52.381 0.00 0.00 0.00 3.24
2669 3248 4.264217 GGGGGTCCTCCTTCATTCTAAAAA 60.264 45.833 0.00 0.00 35.33 1.94
2670 3249 3.268595 GGGGGTCCTCCTTCATTCTAAAA 59.731 47.826 0.00 0.00 35.33 1.52
2671 3250 2.850568 GGGGGTCCTCCTTCATTCTAAA 59.149 50.000 0.00 0.00 35.33 1.85
2672 3251 2.488836 GGGGGTCCTCCTTCATTCTAA 58.511 52.381 0.00 0.00 35.33 2.10
2673 3252 1.691482 CGGGGGTCCTCCTTCATTCTA 60.691 57.143 6.13 0.00 35.33 2.10
2674 3253 0.983378 CGGGGGTCCTCCTTCATTCT 60.983 60.000 6.13 0.00 35.33 2.40
2675 3254 1.527370 CGGGGGTCCTCCTTCATTC 59.473 63.158 6.13 0.00 35.33 2.67
2676 3255 2.001269 CCGGGGGTCCTCCTTCATT 61.001 63.158 6.13 0.00 35.33 2.57
2677 3256 2.366972 CCGGGGGTCCTCCTTCAT 60.367 66.667 6.13 0.00 35.33 2.57
2685 3264 4.791069 TACAGAGGCCGGGGGTCC 62.791 72.222 2.18 0.00 0.00 4.46
2686 3265 2.446036 ATACAGAGGCCGGGGGTC 60.446 66.667 2.18 0.00 0.00 4.46
2687 3266 2.446036 GATACAGAGGCCGGGGGT 60.446 66.667 2.18 0.00 0.00 4.95
2688 3267 2.122813 AGATACAGAGGCCGGGGG 60.123 66.667 2.18 0.00 0.00 5.40
2689 3268 2.511452 CCAGATACAGAGGCCGGGG 61.511 68.421 2.18 0.00 0.00 5.73
2690 3269 1.457643 TCCAGATACAGAGGCCGGG 60.458 63.158 2.18 0.00 0.00 5.73
2691 3270 1.742768 GTCCAGATACAGAGGCCGG 59.257 63.158 0.00 0.00 0.00 6.13
2692 3271 1.101635 TCGTCCAGATACAGAGGCCG 61.102 60.000 0.00 0.00 0.00 6.13
2693 3272 1.000283 CATCGTCCAGATACAGAGGCC 60.000 57.143 0.00 0.00 37.52 5.19
2694 3273 1.604185 GCATCGTCCAGATACAGAGGC 60.604 57.143 0.00 0.00 37.52 4.70
2695 3274 1.683385 TGCATCGTCCAGATACAGAGG 59.317 52.381 0.00 0.00 37.52 3.69
2696 3275 3.315418 CATGCATCGTCCAGATACAGAG 58.685 50.000 0.00 0.00 36.18 3.35
2697 3276 2.546584 GCATGCATCGTCCAGATACAGA 60.547 50.000 14.21 0.00 36.18 3.41
2698 3277 1.797046 GCATGCATCGTCCAGATACAG 59.203 52.381 14.21 0.00 36.18 2.74
2699 3278 1.138661 TGCATGCATCGTCCAGATACA 59.861 47.619 18.46 0.00 37.52 2.29
2700 3279 1.797046 CTGCATGCATCGTCCAGATAC 59.203 52.381 22.97 0.00 37.52 2.24
2701 3280 1.875157 GCTGCATGCATCGTCCAGATA 60.875 52.381 22.97 0.00 42.31 1.98
2702 3281 1.164662 GCTGCATGCATCGTCCAGAT 61.165 55.000 22.97 0.00 42.31 2.90
2703 3282 1.816679 GCTGCATGCATCGTCCAGA 60.817 57.895 22.97 0.00 42.31 3.86
2704 3283 2.713770 GCTGCATGCATCGTCCAG 59.286 61.111 22.97 8.76 42.31 3.86
2705 3284 2.825387 GGCTGCATGCATCGTCCA 60.825 61.111 22.97 0.00 45.15 4.02
2706 3285 2.825387 TGGCTGCATGCATCGTCC 60.825 61.111 22.97 19.03 45.15 4.79
2707 3286 1.651240 AAGTGGCTGCATGCATCGTC 61.651 55.000 22.97 13.00 45.15 4.20
2708 3287 1.246056 AAAGTGGCTGCATGCATCGT 61.246 50.000 22.97 7.77 45.15 3.73
2709 3288 0.734309 TAAAGTGGCTGCATGCATCG 59.266 50.000 22.97 12.00 45.15 3.84
2710 3289 3.447918 AATAAAGTGGCTGCATGCATC 57.552 42.857 22.97 17.75 45.15 3.91
2711 3290 5.540400 ATTAATAAAGTGGCTGCATGCAT 57.460 34.783 22.97 6.91 45.15 3.96
2712 3291 5.341872 AATTAATAAAGTGGCTGCATGCA 57.658 34.783 21.29 21.29 45.15 3.96
2713 3292 7.652909 TGAATAATTAATAAAGTGGCTGCATGC 59.347 33.333 11.82 11.82 41.94 4.06
2714 3293 8.971321 GTGAATAATTAATAAAGTGGCTGCATG 58.029 33.333 0.50 0.00 0.00 4.06
2715 3294 8.694540 TGTGAATAATTAATAAAGTGGCTGCAT 58.305 29.630 0.50 0.00 0.00 3.96
2716 3295 7.973388 GTGTGAATAATTAATAAAGTGGCTGCA 59.027 33.333 0.50 0.00 0.00 4.41
2717 3296 7.973388 TGTGTGAATAATTAATAAAGTGGCTGC 59.027 33.333 0.00 0.00 0.00 5.25
2718 3297 9.853555 TTGTGTGAATAATTAATAAAGTGGCTG 57.146 29.630 0.00 0.00 0.00 4.85
2737 3316 9.562408 TGTATGACTTTATAAGGTTTTGTGTGA 57.438 29.630 1.33 0.00 0.00 3.58
2753 3332 9.946165 GCTTTAGTTTTACTGTTGTATGACTTT 57.054 29.630 0.00 0.00 31.35 2.66
2754 3333 8.565416 GGCTTTAGTTTTACTGTTGTATGACTT 58.435 33.333 0.00 0.00 31.35 3.01
2755 3334 7.717875 TGGCTTTAGTTTTACTGTTGTATGACT 59.282 33.333 0.00 0.00 32.62 3.41
2756 3335 7.801783 GTGGCTTTAGTTTTACTGTTGTATGAC 59.198 37.037 0.00 0.00 0.00 3.06
2757 3336 7.040961 GGTGGCTTTAGTTTTACTGTTGTATGA 60.041 37.037 0.00 0.00 0.00 2.15
2758 3337 7.081976 GGTGGCTTTAGTTTTACTGTTGTATG 58.918 38.462 0.00 0.00 0.00 2.39
2759 3338 6.072893 CGGTGGCTTTAGTTTTACTGTTGTAT 60.073 38.462 0.00 0.00 0.00 2.29
2760 3339 5.236911 CGGTGGCTTTAGTTTTACTGTTGTA 59.763 40.000 0.00 0.00 0.00 2.41
2761 3340 4.035909 CGGTGGCTTTAGTTTTACTGTTGT 59.964 41.667 0.00 0.00 0.00 3.32
2762 3341 4.035909 ACGGTGGCTTTAGTTTTACTGTTG 59.964 41.667 0.00 0.00 0.00 3.33
2763 3342 4.201657 ACGGTGGCTTTAGTTTTACTGTT 58.798 39.130 0.00 0.00 0.00 3.16
2764 3343 3.811497 GACGGTGGCTTTAGTTTTACTGT 59.189 43.478 0.00 0.00 0.00 3.55
2765 3344 3.187842 GGACGGTGGCTTTAGTTTTACTG 59.812 47.826 0.00 0.00 0.00 2.74
2766 3345 3.181452 TGGACGGTGGCTTTAGTTTTACT 60.181 43.478 0.00 0.00 0.00 2.24
2767 3346 3.140623 TGGACGGTGGCTTTAGTTTTAC 58.859 45.455 0.00 0.00 0.00 2.01
2768 3347 3.404899 CTGGACGGTGGCTTTAGTTTTA 58.595 45.455 0.00 0.00 0.00 1.52
2769 3348 2.227194 CTGGACGGTGGCTTTAGTTTT 58.773 47.619 0.00 0.00 0.00 2.43
2770 3349 1.544759 CCTGGACGGTGGCTTTAGTTT 60.545 52.381 0.00 0.00 0.00 2.66
2771 3350 0.036306 CCTGGACGGTGGCTTTAGTT 59.964 55.000 0.00 0.00 0.00 2.24
2772 3351 1.677552 CCTGGACGGTGGCTTTAGT 59.322 57.895 0.00 0.00 0.00 2.24
2773 3352 1.745489 GCCTGGACGGTGGCTTTAG 60.745 63.158 0.00 0.00 45.26 1.85
2774 3353 2.349755 GCCTGGACGGTGGCTTTA 59.650 61.111 0.00 0.00 45.26 1.85
2779 3358 2.034066 ATGTTGCCTGGACGGTGG 59.966 61.111 0.00 0.00 34.25 4.61
2780 3359 1.003355 AGATGTTGCCTGGACGGTG 60.003 57.895 0.00 0.00 34.25 4.94
2781 3360 1.003355 CAGATGTTGCCTGGACGGT 60.003 57.895 0.00 0.00 34.25 4.83
2782 3361 1.003355 ACAGATGTTGCCTGGACGG 60.003 57.895 0.00 0.00 36.03 4.79
2783 3362 1.354337 CGACAGATGTTGCCTGGACG 61.354 60.000 0.00 0.00 36.03 4.79
2784 3363 2.460330 CGACAGATGTTGCCTGGAC 58.540 57.895 0.00 0.00 36.03 4.02
2791 3370 2.949451 AGGAGTAGCGACAGATGTTG 57.051 50.000 0.00 0.00 0.00 3.33
2792 3371 4.465886 AGATAGGAGTAGCGACAGATGTT 58.534 43.478 0.00 0.00 0.00 2.71
2793 3372 4.093472 AGATAGGAGTAGCGACAGATGT 57.907 45.455 0.00 0.00 0.00 3.06
2794 3373 5.242434 AGTAGATAGGAGTAGCGACAGATG 58.758 45.833 0.00 0.00 0.00 2.90
2795 3374 5.492855 AGTAGATAGGAGTAGCGACAGAT 57.507 43.478 0.00 0.00 0.00 2.90
2796 3375 4.959560 AGTAGATAGGAGTAGCGACAGA 57.040 45.455 0.00 0.00 0.00 3.41
2797 3376 5.057819 TCAAGTAGATAGGAGTAGCGACAG 58.942 45.833 0.00 0.00 0.00 3.51
2798 3377 5.032327 TCAAGTAGATAGGAGTAGCGACA 57.968 43.478 0.00 0.00 0.00 4.35
2799 3378 5.470777 ACATCAAGTAGATAGGAGTAGCGAC 59.529 44.000 0.00 0.00 34.43 5.19
2800 3379 5.622180 ACATCAAGTAGATAGGAGTAGCGA 58.378 41.667 0.00 0.00 34.43 4.93
2801 3380 5.950758 ACATCAAGTAGATAGGAGTAGCG 57.049 43.478 0.00 0.00 34.43 4.26
2814 3393 6.077993 ACTATCAGCATCCCTACATCAAGTA 58.922 40.000 0.00 0.00 0.00 2.24
2815 3394 4.904251 ACTATCAGCATCCCTACATCAAGT 59.096 41.667 0.00 0.00 0.00 3.16
2816 3395 5.245751 AGACTATCAGCATCCCTACATCAAG 59.754 44.000 0.00 0.00 0.00 3.02
2817 3396 5.011431 CAGACTATCAGCATCCCTACATCAA 59.989 44.000 0.00 0.00 0.00 2.57
2818 3397 4.525874 CAGACTATCAGCATCCCTACATCA 59.474 45.833 0.00 0.00 0.00 3.07
2819 3398 4.081752 CCAGACTATCAGCATCCCTACATC 60.082 50.000 0.00 0.00 0.00 3.06
2820 3399 3.837146 CCAGACTATCAGCATCCCTACAT 59.163 47.826 0.00 0.00 0.00 2.29
2821 3400 3.234353 CCAGACTATCAGCATCCCTACA 58.766 50.000 0.00 0.00 0.00 2.74
2822 3401 2.564947 CCCAGACTATCAGCATCCCTAC 59.435 54.545 0.00 0.00 0.00 3.18
2823 3402 2.894731 CCCAGACTATCAGCATCCCTA 58.105 52.381 0.00 0.00 0.00 3.53
2824 3403 1.727062 CCCAGACTATCAGCATCCCT 58.273 55.000 0.00 0.00 0.00 4.20
2825 3404 0.036022 GCCCAGACTATCAGCATCCC 59.964 60.000 0.00 0.00 0.00 3.85
2826 3405 1.055040 AGCCCAGACTATCAGCATCC 58.945 55.000 0.00 0.00 0.00 3.51
2827 3406 4.550076 ATTAGCCCAGACTATCAGCATC 57.450 45.455 0.00 0.00 0.00 3.91
2828 3407 4.081198 GCTATTAGCCCAGACTATCAGCAT 60.081 45.833 4.21 0.00 34.48 3.79
2829 3408 3.259374 GCTATTAGCCCAGACTATCAGCA 59.741 47.826 4.21 0.00 34.48 4.41
2830 3409 3.259374 TGCTATTAGCCCAGACTATCAGC 59.741 47.826 13.01 0.00 41.51 4.26
2831 3410 5.474578 TTGCTATTAGCCCAGACTATCAG 57.525 43.478 13.01 0.00 41.51 2.90
2832 3411 5.130311 TGTTTGCTATTAGCCCAGACTATCA 59.870 40.000 13.01 0.00 41.51 2.15
2833 3412 5.611374 TGTTTGCTATTAGCCCAGACTATC 58.389 41.667 13.01 0.00 41.51 2.08
2834 3413 5.366768 TCTGTTTGCTATTAGCCCAGACTAT 59.633 40.000 18.36 0.00 41.51 2.12
2835 3414 4.714802 TCTGTTTGCTATTAGCCCAGACTA 59.285 41.667 18.36 5.11 41.51 2.59
2836 3415 3.519510 TCTGTTTGCTATTAGCCCAGACT 59.480 43.478 18.36 0.00 41.51 3.24
2837 3416 3.623510 GTCTGTTTGCTATTAGCCCAGAC 59.376 47.826 26.77 26.77 44.80 3.51
2838 3417 3.370527 GGTCTGTTTGCTATTAGCCCAGA 60.371 47.826 18.36 18.36 41.51 3.86
2839 3418 2.945668 GGTCTGTTTGCTATTAGCCCAG 59.054 50.000 13.01 14.55 41.51 4.45
2840 3419 2.576191 AGGTCTGTTTGCTATTAGCCCA 59.424 45.455 13.01 6.45 41.51 5.36
2841 3420 3.206964 GAGGTCTGTTTGCTATTAGCCC 58.793 50.000 13.01 5.18 41.51 5.19
2842 3421 2.866762 CGAGGTCTGTTTGCTATTAGCC 59.133 50.000 13.01 0.00 41.51 3.93
2843 3422 2.285488 GCGAGGTCTGTTTGCTATTAGC 59.715 50.000 8.80 8.80 42.82 3.09
2844 3423 3.521560 TGCGAGGTCTGTTTGCTATTAG 58.478 45.455 0.00 0.00 0.00 1.73
2845 3424 3.521560 CTGCGAGGTCTGTTTGCTATTA 58.478 45.455 0.00 0.00 0.00 0.98
2846 3425 2.350522 CTGCGAGGTCTGTTTGCTATT 58.649 47.619 0.00 0.00 0.00 1.73
2847 3426 2.009042 GCTGCGAGGTCTGTTTGCTAT 61.009 52.381 0.00 0.00 0.00 2.97
2848 3427 0.670546 GCTGCGAGGTCTGTTTGCTA 60.671 55.000 0.00 0.00 0.00 3.49
2849 3428 1.963338 GCTGCGAGGTCTGTTTGCT 60.963 57.895 0.00 0.00 0.00 3.91
2850 3429 2.558313 GCTGCGAGGTCTGTTTGC 59.442 61.111 0.00 0.00 0.00 3.68
2851 3430 1.572085 CTGGCTGCGAGGTCTGTTTG 61.572 60.000 3.49 0.00 0.00 2.93
2852 3431 1.302033 CTGGCTGCGAGGTCTGTTT 60.302 57.895 3.49 0.00 0.00 2.83
2853 3432 2.210013 TCTGGCTGCGAGGTCTGTT 61.210 57.895 11.81 0.00 0.00 3.16
2854 3433 2.601666 TCTGGCTGCGAGGTCTGT 60.602 61.111 11.81 0.00 0.00 3.41
2855 3434 2.125753 GTCTGGCTGCGAGGTCTG 60.126 66.667 11.81 0.00 0.00 3.51
2856 3435 2.500815 TAGGTCTGGCTGCGAGGTCT 62.501 60.000 11.81 11.25 0.00 3.85
2857 3436 1.605058 TTAGGTCTGGCTGCGAGGTC 61.605 60.000 11.81 5.68 0.00 3.85
2858 3437 1.609501 TTAGGTCTGGCTGCGAGGT 60.610 57.895 11.81 0.22 0.00 3.85
2859 3438 1.153549 GTTAGGTCTGGCTGCGAGG 60.154 63.158 11.81 0.00 0.00 4.63
2860 3439 0.176680 ATGTTAGGTCTGGCTGCGAG 59.823 55.000 5.20 5.20 0.00 5.03
2861 3440 0.175760 GATGTTAGGTCTGGCTGCGA 59.824 55.000 0.00 0.00 0.00 5.10
2862 3441 0.176680 AGATGTTAGGTCTGGCTGCG 59.823 55.000 0.00 0.00 0.00 5.18
2863 3442 3.133003 TCTTAGATGTTAGGTCTGGCTGC 59.867 47.826 0.00 0.00 0.00 5.25
2864 3443 4.688021 GTCTTAGATGTTAGGTCTGGCTG 58.312 47.826 0.00 0.00 0.00 4.85
2865 3444 3.381908 CGTCTTAGATGTTAGGTCTGGCT 59.618 47.826 0.00 0.00 0.00 4.75
2866 3445 3.130693 ACGTCTTAGATGTTAGGTCTGGC 59.869 47.826 0.56 0.00 0.00 4.85
2867 3446 4.398358 TCACGTCTTAGATGTTAGGTCTGG 59.602 45.833 4.08 0.00 28.28 3.86
2868 3447 5.449314 CCTCACGTCTTAGATGTTAGGTCTG 60.449 48.000 20.89 3.82 37.85 3.51
2869 3448 4.641094 CCTCACGTCTTAGATGTTAGGTCT 59.359 45.833 20.89 0.00 37.85 3.85
2870 3449 4.398673 ACCTCACGTCTTAGATGTTAGGTC 59.601 45.833 26.22 0.00 46.81 3.85
2871 3450 4.342359 ACCTCACGTCTTAGATGTTAGGT 58.658 43.478 26.22 26.22 45.67 3.08
2872 3451 4.202030 GGACCTCACGTCTTAGATGTTAGG 60.202 50.000 25.16 25.16 44.21 2.69
2873 3452 4.202030 GGGACCTCACGTCTTAGATGTTAG 60.202 50.000 4.08 6.58 41.64 2.34
2874 3453 3.698040 GGGACCTCACGTCTTAGATGTTA 59.302 47.826 4.08 0.00 41.64 2.41
2875 3454 2.496470 GGGACCTCACGTCTTAGATGTT 59.504 50.000 4.08 0.00 41.64 2.71
2876 3455 2.100989 GGGACCTCACGTCTTAGATGT 58.899 52.381 0.56 0.56 41.64 3.06
2877 3456 2.100197 TGGGACCTCACGTCTTAGATG 58.900 52.381 0.00 0.00 41.64 2.90
2878 3457 2.496470 GTTGGGACCTCACGTCTTAGAT 59.504 50.000 0.00 0.00 41.64 1.98
2879 3458 1.891150 GTTGGGACCTCACGTCTTAGA 59.109 52.381 0.00 0.00 41.64 2.10
2880 3459 1.067071 GGTTGGGACCTCACGTCTTAG 60.067 57.143 0.00 0.00 42.99 2.18
2881 3460 0.971386 GGTTGGGACCTCACGTCTTA 59.029 55.000 0.00 0.00 42.99 2.10
2882 3461 1.052124 TGGTTGGGACCTCACGTCTT 61.052 55.000 0.00 0.00 46.66 3.01
2883 3462 1.458777 TGGTTGGGACCTCACGTCT 60.459 57.895 0.00 0.00 46.66 4.18
2884 3463 1.004918 CTGGTTGGGACCTCACGTC 60.005 63.158 0.00 0.00 46.66 4.34
2885 3464 2.516888 CCTGGTTGGGACCTCACGT 61.517 63.158 0.00 0.00 46.66 4.49
2886 3465 2.214216 TCCTGGTTGGGACCTCACG 61.214 63.158 0.00 0.00 46.66 4.35
2887 3466 3.900888 TCCTGGTTGGGACCTCAC 58.099 61.111 0.00 0.00 46.66 3.51
2893 3472 2.879233 GCAGACGTCCTGGTTGGGA 61.879 63.158 13.01 0.00 43.13 4.37
2894 3473 2.358737 GCAGACGTCCTGGTTGGG 60.359 66.667 13.01 0.00 43.13 4.12
2895 3474 2.358737 GGCAGACGTCCTGGTTGG 60.359 66.667 13.01 0.00 43.13 3.77
2896 3475 2.738521 CGGCAGACGTCCTGGTTG 60.739 66.667 13.01 4.52 43.13 3.77
2897 3476 2.915659 TCGGCAGACGTCCTGGTT 60.916 61.111 13.01 0.00 43.13 3.67
2898 3477 2.759641 TACTCGGCAGACGTCCTGGT 62.760 60.000 13.01 5.77 43.13 4.00
2899 3478 1.384989 ATACTCGGCAGACGTCCTGG 61.385 60.000 13.01 3.34 43.13 4.45
2900 3479 0.248661 CATACTCGGCAGACGTCCTG 60.249 60.000 13.01 11.01 45.67 3.86
2901 3480 0.393944 TCATACTCGGCAGACGTCCT 60.394 55.000 13.01 0.00 44.69 3.85
2902 3481 0.029567 CTCATACTCGGCAGACGTCC 59.970 60.000 13.01 0.00 44.69 4.79
2903 3482 0.029567 CCTCATACTCGGCAGACGTC 59.970 60.000 7.70 7.70 44.69 4.34
2904 3483 2.005960 GCCTCATACTCGGCAGACGT 62.006 60.000 0.00 0.00 45.59 4.34
2905 3484 1.299468 GCCTCATACTCGGCAGACG 60.299 63.158 0.00 0.00 45.59 4.18
2906 3485 4.740235 GCCTCATACTCGGCAGAC 57.260 61.111 0.00 0.00 45.59 3.51
2910 3489 2.109181 GGGTGCCTCATACTCGGC 59.891 66.667 0.00 0.00 46.46 5.54
2911 3490 1.144057 GTGGGTGCCTCATACTCGG 59.856 63.158 0.00 0.00 0.00 4.63
2912 3491 1.144057 GGTGGGTGCCTCATACTCG 59.856 63.158 0.00 0.00 0.00 4.18
2913 3492 0.179000 CTGGTGGGTGCCTCATACTC 59.821 60.000 0.00 0.00 0.00 2.59
2914 3493 0.547712 ACTGGTGGGTGCCTCATACT 60.548 55.000 0.00 0.00 0.00 2.12
2915 3494 0.107654 GACTGGTGGGTGCCTCATAC 60.108 60.000 0.00 0.00 0.00 2.39
2916 3495 1.271840 GGACTGGTGGGTGCCTCATA 61.272 60.000 0.00 0.00 0.00 2.15
2917 3496 2.606587 GGACTGGTGGGTGCCTCAT 61.607 63.158 0.00 0.00 0.00 2.90
2918 3497 3.249189 GGACTGGTGGGTGCCTCA 61.249 66.667 0.00 0.00 0.00 3.86
2919 3498 4.394712 CGGACTGGTGGGTGCCTC 62.395 72.222 0.00 0.00 0.00 4.70
2928 3507 1.673808 GAGGAATACGCCGGACTGGT 61.674 60.000 5.05 0.00 41.21 4.00
2929 3508 1.067582 GAGGAATACGCCGGACTGG 59.932 63.158 5.05 0.00 42.50 4.00
2930 3509 0.174845 TTGAGGAATACGCCGGACTG 59.825 55.000 5.05 0.00 0.00 3.51
2931 3510 0.175073 GTTGAGGAATACGCCGGACT 59.825 55.000 5.05 0.00 0.00 3.85
2932 3511 0.175073 AGTTGAGGAATACGCCGGAC 59.825 55.000 5.05 0.00 0.00 4.79
2933 3512 1.679680 CTAGTTGAGGAATACGCCGGA 59.320 52.381 5.05 0.00 0.00 5.14
2934 3513 2.135664 CTAGTTGAGGAATACGCCGG 57.864 55.000 0.00 0.00 0.00 6.13
2945 3524 1.153549 GGCAGGCGTCCTAGTTGAG 60.154 63.158 0.00 0.00 29.64 3.02
2946 3525 2.978824 GGCAGGCGTCCTAGTTGA 59.021 61.111 0.00 0.00 29.64 3.18
2947 3526 2.509336 CGGCAGGCGTCCTAGTTG 60.509 66.667 8.53 0.00 29.64 3.16
2948 3527 3.771160 CCGGCAGGCGTCCTAGTT 61.771 66.667 16.17 0.00 29.64 2.24
2951 3530 3.744003 ATACCCGGCAGGCGTCCTA 62.744 63.158 16.17 1.63 40.58 2.94
2953 3532 4.910585 CATACCCGGCAGGCGTCC 62.911 72.222 16.17 0.00 40.58 4.79
2954 3533 3.792053 CTCATACCCGGCAGGCGTC 62.792 68.421 16.17 0.00 40.58 5.19
2955 3534 3.849951 CTCATACCCGGCAGGCGT 61.850 66.667 16.17 0.00 40.58 5.68
2956 3535 4.609018 CCTCATACCCGGCAGGCG 62.609 72.222 9.96 9.96 40.58 5.52
2957 3536 4.937431 GCCTCATACCCGGCAGGC 62.937 72.222 0.00 3.18 45.59 4.85
2980 3559 2.283388 ATTGGTGGCAGGTGGCTG 60.283 61.111 5.03 0.00 44.01 4.85
2981 3560 2.036256 GATTGGTGGCAGGTGGCT 59.964 61.111 5.03 0.00 44.01 4.75
2982 3561 3.070576 GGATTGGTGGCAGGTGGC 61.071 66.667 0.00 0.00 43.74 5.01
2983 3562 1.000739 ATGGATTGGTGGCAGGTGG 59.999 57.895 0.00 0.00 0.00 4.61
2984 3563 0.033796 AGATGGATTGGTGGCAGGTG 60.034 55.000 0.00 0.00 0.00 4.00
2985 3564 0.706433 AAGATGGATTGGTGGCAGGT 59.294 50.000 0.00 0.00 0.00 4.00
2986 3565 1.341285 TGAAGATGGATTGGTGGCAGG 60.341 52.381 0.00 0.00 0.00 4.85
2987 3566 2.133281 TGAAGATGGATTGGTGGCAG 57.867 50.000 0.00 0.00 0.00 4.85
2988 3567 2.601240 TTGAAGATGGATTGGTGGCA 57.399 45.000 0.00 0.00 0.00 4.92
2989 3568 2.762327 ACATTGAAGATGGATTGGTGGC 59.238 45.455 0.00 0.00 0.00 5.01
2990 3569 4.221262 ACAACATTGAAGATGGATTGGTGG 59.779 41.667 0.00 0.00 0.00 4.61
2991 3570 5.395682 ACAACATTGAAGATGGATTGGTG 57.604 39.130 0.00 0.00 0.00 4.17
2992 3571 6.151648 CAGTACAACATTGAAGATGGATTGGT 59.848 38.462 0.00 0.00 0.00 3.67
2993 3572 6.558009 CAGTACAACATTGAAGATGGATTGG 58.442 40.000 0.00 0.00 0.00 3.16
2994 3573 6.032094 GCAGTACAACATTGAAGATGGATTG 58.968 40.000 0.00 0.00 0.00 2.67
2995 3574 5.948162 AGCAGTACAACATTGAAGATGGATT 59.052 36.000 0.00 0.00 0.00 3.01
2996 3575 5.356190 CAGCAGTACAACATTGAAGATGGAT 59.644 40.000 0.00 0.00 0.00 3.41
2997 3576 4.696877 CAGCAGTACAACATTGAAGATGGA 59.303 41.667 0.00 0.00 0.00 3.41
2998 3577 4.673580 GCAGCAGTACAACATTGAAGATGG 60.674 45.833 0.00 0.00 0.00 3.51
2999 3578 4.083164 TGCAGCAGTACAACATTGAAGATG 60.083 41.667 0.00 0.00 0.00 2.90
3000 3579 4.074259 TGCAGCAGTACAACATTGAAGAT 58.926 39.130 0.00 0.00 0.00 2.40
3001 3580 3.475575 TGCAGCAGTACAACATTGAAGA 58.524 40.909 0.00 0.00 0.00 2.87
3002 3581 3.902261 TGCAGCAGTACAACATTGAAG 57.098 42.857 0.00 0.00 0.00 3.02
3003 3582 3.819902 TGATGCAGCAGTACAACATTGAA 59.180 39.130 0.00 0.00 0.00 2.69
3004 3583 3.189080 GTGATGCAGCAGTACAACATTGA 59.811 43.478 4.06 0.00 0.00 2.57
3005 3584 3.189910 AGTGATGCAGCAGTACAACATTG 59.810 43.478 11.32 0.00 0.00 2.82
3006 3585 3.415212 AGTGATGCAGCAGTACAACATT 58.585 40.909 11.32 0.00 0.00 2.71
3007 3586 3.063510 AGTGATGCAGCAGTACAACAT 57.936 42.857 11.32 0.00 0.00 2.71
3008 3587 2.549064 AGTGATGCAGCAGTACAACA 57.451 45.000 11.32 0.00 0.00 3.33
3009 3588 3.369147 CACTAGTGATGCAGCAGTACAAC 59.631 47.826 18.45 0.00 0.00 3.32
3010 3589 3.588955 CACTAGTGATGCAGCAGTACAA 58.411 45.455 18.45 0.00 0.00 2.41
3011 3590 2.675032 GCACTAGTGATGCAGCAGTACA 60.675 50.000 27.08 0.00 42.88 2.90
3012 3591 1.929836 GCACTAGTGATGCAGCAGTAC 59.070 52.381 27.08 2.97 42.88 2.73
3013 3592 2.299993 GCACTAGTGATGCAGCAGTA 57.700 50.000 27.08 18.00 42.88 2.74
3014 3593 3.149899 GCACTAGTGATGCAGCAGT 57.850 52.632 27.08 17.63 42.88 4.40
3020 3599 1.002366 CGGTTCTGCACTAGTGATGC 58.998 55.000 27.08 11.93 43.68 3.91
3021 3600 1.645034 CCGGTTCTGCACTAGTGATG 58.355 55.000 27.08 16.72 0.00 3.07
3022 3601 0.537188 CCCGGTTCTGCACTAGTGAT 59.463 55.000 27.08 0.00 0.00 3.06
3023 3602 1.972198 CCCGGTTCTGCACTAGTGA 59.028 57.895 27.08 10.55 0.00 3.41
3024 3603 1.741770 GCCCGGTTCTGCACTAGTG 60.742 63.158 18.93 18.93 0.00 2.74
3025 3604 1.764571 TTGCCCGGTTCTGCACTAGT 61.765 55.000 0.00 0.00 37.18 2.57
3026 3605 0.392998 ATTGCCCGGTTCTGCACTAG 60.393 55.000 0.00 0.00 37.18 2.57
3027 3606 0.906066 TATTGCCCGGTTCTGCACTA 59.094 50.000 0.00 0.00 37.18 2.74
3028 3607 0.392998 CTATTGCCCGGTTCTGCACT 60.393 55.000 0.00 0.00 37.18 4.40
3029 3608 1.993369 GCTATTGCCCGGTTCTGCAC 61.993 60.000 0.00 0.00 37.18 4.57
3030 3609 1.748879 GCTATTGCCCGGTTCTGCA 60.749 57.895 0.00 0.00 35.27 4.41
3031 3610 1.748879 TGCTATTGCCCGGTTCTGC 60.749 57.895 0.00 0.00 38.71 4.26
3032 3611 1.376609 GGTGCTATTGCCCGGTTCTG 61.377 60.000 0.00 0.00 38.71 3.02
3033 3612 1.077716 GGTGCTATTGCCCGGTTCT 60.078 57.895 0.00 0.00 38.71 3.01
3034 3613 2.469516 CGGTGCTATTGCCCGGTTC 61.470 63.158 16.86 0.00 43.94 3.62
3035 3614 2.437716 CGGTGCTATTGCCCGGTT 60.438 61.111 16.86 0.00 43.94 4.44
3038 3617 2.437716 AACCGGTGCTATTGCCCG 60.438 61.111 8.52 17.41 45.75 6.13
3039 3618 2.469516 CGAACCGGTGCTATTGCCC 61.470 63.158 8.52 0.00 38.71 5.36
3040 3619 0.460635 TACGAACCGGTGCTATTGCC 60.461 55.000 8.52 0.00 38.71 4.52
3041 3620 1.326548 CTTACGAACCGGTGCTATTGC 59.673 52.381 8.52 0.00 40.20 3.56
3042 3621 1.931172 CCTTACGAACCGGTGCTATTG 59.069 52.381 8.52 0.00 0.00 1.90
3043 3622 1.551883 ACCTTACGAACCGGTGCTATT 59.448 47.619 8.52 0.00 0.00 1.73
3044 3623 1.135721 GACCTTACGAACCGGTGCTAT 59.864 52.381 8.52 0.00 0.00 2.97
3045 3624 0.527565 GACCTTACGAACCGGTGCTA 59.472 55.000 8.52 0.00 0.00 3.49
3046 3625 1.291272 GACCTTACGAACCGGTGCT 59.709 57.895 8.52 0.00 0.00 4.40
3047 3626 1.739196 GGACCTTACGAACCGGTGC 60.739 63.158 8.52 4.53 32.05 5.01
3048 3627 0.319405 AAGGACCTTACGAACCGGTG 59.681 55.000 8.52 0.00 0.00 4.94
3049 3628 1.051008 AAAGGACCTTACGAACCGGT 58.949 50.000 7.30 0.00 0.00 5.28
3050 3629 2.232208 ACTAAAGGACCTTACGAACCGG 59.768 50.000 7.30 0.00 0.00 5.28
3051 3630 3.248266 CACTAAAGGACCTTACGAACCG 58.752 50.000 7.30 0.00 0.00 4.44
3052 3631 2.998670 GCACTAAAGGACCTTACGAACC 59.001 50.000 7.30 0.00 0.00 3.62
3053 3632 2.998670 GGCACTAAAGGACCTTACGAAC 59.001 50.000 7.30 0.00 0.00 3.95
3054 3633 2.353011 CGGCACTAAAGGACCTTACGAA 60.353 50.000 7.30 0.00 0.00 3.85
3055 3634 1.203052 CGGCACTAAAGGACCTTACGA 59.797 52.381 7.30 0.00 0.00 3.43
3056 3635 1.636988 CGGCACTAAAGGACCTTACG 58.363 55.000 7.30 4.18 0.00 3.18
3057 3636 1.277273 ACCGGCACTAAAGGACCTTAC 59.723 52.381 7.30 0.00 0.00 2.34
3058 3637 1.648116 ACCGGCACTAAAGGACCTTA 58.352 50.000 7.30 0.00 0.00 2.69
3059 3638 0.769247 AACCGGCACTAAAGGACCTT 59.231 50.000 0.00 0.00 0.00 3.50
3060 3639 0.323957 GAACCGGCACTAAAGGACCT 59.676 55.000 0.00 0.00 0.00 3.85
3061 3640 0.675837 GGAACCGGCACTAAAGGACC 60.676 60.000 0.00 0.00 0.00 4.46
3062 3641 0.035739 TGGAACCGGCACTAAAGGAC 59.964 55.000 0.00 0.00 0.00 3.85
3063 3642 0.988832 ATGGAACCGGCACTAAAGGA 59.011 50.000 0.00 0.00 0.00 3.36
3064 3643 2.681344 GTTATGGAACCGGCACTAAAGG 59.319 50.000 0.00 0.00 0.00 3.11
3065 3644 2.681344 GGTTATGGAACCGGCACTAAAG 59.319 50.000 0.00 0.00 45.73 1.85
3066 3645 2.713877 GGTTATGGAACCGGCACTAAA 58.286 47.619 0.00 0.00 45.73 1.85
3067 3646 2.406596 GGTTATGGAACCGGCACTAA 57.593 50.000 0.00 0.00 45.73 2.24
3076 3655 3.340928 ACTTTAGTGCCGGTTATGGAAC 58.659 45.455 1.90 0.00 37.90 3.62
3077 3656 3.706600 ACTTTAGTGCCGGTTATGGAA 57.293 42.857 1.90 0.00 0.00 3.53
3078 3657 4.443739 CCATACTTTAGTGCCGGTTATGGA 60.444 45.833 1.90 0.00 35.26 3.41
3079 3658 3.813166 CCATACTTTAGTGCCGGTTATGG 59.187 47.826 1.90 3.60 0.00 2.74
3080 3659 4.448210 ACCATACTTTAGTGCCGGTTATG 58.552 43.478 1.90 0.00 0.00 1.90
3081 3660 4.162698 TGACCATACTTTAGTGCCGGTTAT 59.837 41.667 1.90 0.00 0.00 1.89
3082 3661 3.514706 TGACCATACTTTAGTGCCGGTTA 59.485 43.478 1.90 0.00 0.00 2.85
3083 3662 2.303600 TGACCATACTTTAGTGCCGGTT 59.696 45.455 1.90 0.00 0.00 4.44
3084 3663 1.903860 TGACCATACTTTAGTGCCGGT 59.096 47.619 1.90 0.00 0.00 5.28
3085 3664 2.093658 AGTGACCATACTTTAGTGCCGG 60.094 50.000 0.00 0.00 0.00 6.13
3086 3665 3.247006 AGTGACCATACTTTAGTGCCG 57.753 47.619 0.00 0.00 0.00 5.69
3087 3666 5.064834 GCTTTAGTGACCATACTTTAGTGCC 59.935 44.000 0.00 0.00 32.19 5.01
3088 3667 5.064834 GGCTTTAGTGACCATACTTTAGTGC 59.935 44.000 0.00 0.00 32.19 4.40
3089 3668 5.585047 GGGCTTTAGTGACCATACTTTAGTG 59.415 44.000 0.00 0.00 32.19 2.74
3090 3669 5.338953 GGGGCTTTAGTGACCATACTTTAGT 60.339 44.000 0.00 0.00 32.19 2.24
3091 3670 5.123936 GGGGCTTTAGTGACCATACTTTAG 58.876 45.833 0.00 0.00 32.19 1.85
3092 3671 4.080186 GGGGGCTTTAGTGACCATACTTTA 60.080 45.833 0.00 0.00 32.19 1.85
3093 3672 3.308904 GGGGGCTTTAGTGACCATACTTT 60.309 47.826 0.00 0.00 32.19 2.66
3094 3673 2.241430 GGGGGCTTTAGTGACCATACTT 59.759 50.000 0.00 0.00 32.19 2.24
3095 3674 1.844497 GGGGGCTTTAGTGACCATACT 59.156 52.381 0.00 0.00 34.71 2.12
3096 3675 2.343484 GGGGGCTTTAGTGACCATAC 57.657 55.000 0.00 0.00 0.00 2.39
3113 3692 1.208776 CTGAACCGGTACTAAAGGGGG 59.791 57.143 8.00 0.00 0.00 5.40
3114 3693 1.406477 GCTGAACCGGTACTAAAGGGG 60.406 57.143 8.00 0.00 0.00 4.79
3115 3694 1.276989 TGCTGAACCGGTACTAAAGGG 59.723 52.381 8.00 0.00 0.00 3.95
3116 3695 2.344025 GTGCTGAACCGGTACTAAAGG 58.656 52.381 8.00 0.00 0.00 3.11
3117 3696 1.990563 CGTGCTGAACCGGTACTAAAG 59.009 52.381 8.00 2.29 0.00 1.85
3118 3697 1.612950 TCGTGCTGAACCGGTACTAAA 59.387 47.619 8.00 0.00 0.00 1.85
3119 3698 1.246649 TCGTGCTGAACCGGTACTAA 58.753 50.000 8.00 0.00 0.00 2.24
3120 3699 1.246649 TTCGTGCTGAACCGGTACTA 58.753 50.000 8.00 0.00 0.00 1.82
3121 3700 2.043625 TTCGTGCTGAACCGGTACT 58.956 52.632 8.00 0.00 0.00 2.73
3122 3701 4.659480 TTCGTGCTGAACCGGTAC 57.341 55.556 8.00 0.00 0.00 3.34
3134 3713 0.446222 CCATTTAGCACCGGTTCGTG 59.554 55.000 2.97 0.00 36.80 4.35
3135 3714 1.303091 GCCATTTAGCACCGGTTCGT 61.303 55.000 2.97 0.00 0.00 3.85
3136 3715 1.302383 TGCCATTTAGCACCGGTTCG 61.302 55.000 2.97 0.00 38.00 3.95
3137 3716 0.885196 TTGCCATTTAGCACCGGTTC 59.115 50.000 2.97 0.00 43.97 3.62
3138 3717 0.601057 GTTGCCATTTAGCACCGGTT 59.399 50.000 2.97 0.00 43.97 4.44
3139 3718 1.248101 GGTTGCCATTTAGCACCGGT 61.248 55.000 0.00 0.00 43.97 5.28
3140 3719 1.247419 TGGTTGCCATTTAGCACCGG 61.247 55.000 0.00 0.00 43.97 5.28
3141 3720 0.109319 GTGGTTGCCATTTAGCACCG 60.109 55.000 0.00 0.00 43.97 4.94
3142 3721 0.109319 CGTGGTTGCCATTTAGCACC 60.109 55.000 0.00 0.00 43.97 5.01
3143 3722 0.596082 ACGTGGTTGCCATTTAGCAC 59.404 50.000 0.00 0.00 43.97 4.40
3144 3723 0.595588 CACGTGGTTGCCATTTAGCA 59.404 50.000 7.95 0.00 42.17 3.49
3145 3724 0.109319 CCACGTGGTTGCCATTTAGC 60.109 55.000 26.95 0.00 35.28 3.09
3146 3725 0.109319 GCCACGTGGTTGCCATTTAG 60.109 55.000 33.92 6.07 35.28 1.85
3147 3726 0.823769 TGCCACGTGGTTGCCATTTA 60.824 50.000 33.92 8.23 35.28 1.40
3148 3727 2.130426 TGCCACGTGGTTGCCATTT 61.130 52.632 33.92 0.00 35.28 2.32
3149 3728 2.520500 TGCCACGTGGTTGCCATT 60.521 55.556 33.92 0.00 35.28 3.16
3150 3729 3.294493 GTGCCACGTGGTTGCCAT 61.294 61.111 33.92 0.00 35.28 4.40
3153 3732 4.012895 CTCGTGCCACGTGGTTGC 62.013 66.667 33.92 20.95 43.14 4.17
3154 3733 4.012895 GCTCGTGCCACGTGGTTG 62.013 66.667 33.92 23.28 43.14 3.77
3165 3744 4.760047 CCCCGGAGTTGGCTCGTG 62.760 72.222 0.73 0.00 42.53 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.