Multiple sequence alignment - TraesCS7A01G220700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G220700 chr7A 100.000 6430 0 0 1 6430 189301717 189308146 0.000000e+00 11875.0
1 TraesCS7A01G220700 chr7A 88.806 268 30 0 5751 6018 646560180 646560447 4.810000e-86 329.0
2 TraesCS7A01G220700 chr7A 84.615 156 22 1 6275 6430 634327383 634327536 3.100000e-33 154.0
3 TraesCS7A01G220700 chr7A 81.982 111 15 4 3238 3346 316015379 316015486 8.880000e-14 89.8
4 TraesCS7A01G220700 chr7D 95.735 3798 102 22 1866 5643 182345427 182341670 0.000000e+00 6061.0
5 TraesCS7A01G220700 chr7D 89.052 1434 84 37 1 1373 182347114 182345693 0.000000e+00 1711.0
6 TraesCS7A01G220700 chr7D 96.032 252 7 3 6028 6278 363668303 363668552 2.160000e-109 407.0
7 TraesCS7A01G220700 chr7D 76.039 914 111 48 1674 2548 182344815 182345659 6.090000e-100 375.0
8 TraesCS7A01G220700 chr7D 87.857 140 15 1 6278 6417 179526607 179526470 5.160000e-36 163.0
9 TraesCS7A01G220700 chr7B 96.558 3196 73 20 2525 5716 150821668 150818506 0.000000e+00 5258.0
10 TraesCS7A01G220700 chr7B 94.349 584 23 6 1 576 150836104 150835523 0.000000e+00 887.0
11 TraesCS7A01G220700 chr7B 96.502 486 13 1 1995 2476 150822152 150821667 0.000000e+00 800.0
12 TraesCS7A01G220700 chr7B 82.475 816 58 33 683 1447 150823746 150822965 2.530000e-178 636.0
13 TraesCS7A01G220700 chr7B 94.071 253 13 2 6028 6278 598296155 598296407 3.640000e-102 383.0
14 TraesCS7A01G220700 chr7B 92.424 132 3 1 1866 1997 150822538 150822414 1.420000e-41 182.0
15 TraesCS7A01G220700 chr7B 91.262 103 5 2 595 695 150835405 150835305 3.130000e-28 137.0
16 TraesCS7A01G220700 chr7B 81.373 102 14 4 3238 3337 253694143 253694241 1.920000e-10 78.7
17 TraesCS7A01G220700 chr2D 93.822 259 13 3 6028 6283 14087570 14087312 2.810000e-103 387.0
18 TraesCS7A01G220700 chr2D 93.725 255 15 1 6028 6281 37526865 37526611 1.310000e-101 381.0
19 TraesCS7A01G220700 chr2D 93.651 252 14 2 6028 6278 256956313 256956563 6.090000e-100 375.0
20 TraesCS7A01G220700 chr5A 94.118 255 11 4 6028 6278 34841913 34842167 1.010000e-102 385.0
21 TraesCS7A01G220700 chr5A 86.275 153 19 1 6278 6430 531896644 531896494 1.430000e-36 165.0
22 TraesCS7A01G220700 chr6A 94.071 253 13 2 6028 6278 138271285 138271033 3.640000e-102 383.0
23 TraesCS7A01G220700 chr6A 85.621 153 20 1 6278 6430 158307290 158307140 6.670000e-35 159.0
24 TraesCS7A01G220700 chr6A 91.089 101 8 1 1442 1541 54489005 54489105 1.120000e-27 135.0
25 TraesCS7A01G220700 chr2B 93.676 253 14 2 6028 6278 166592125 166592377 1.690000e-100 377.0
26 TraesCS7A01G220700 chr2B 93.676 253 13 3 6029 6278 206287170 206286918 6.090000e-100 375.0
27 TraesCS7A01G220700 chr2B 89.575 259 27 0 5759 6017 728559809 728559551 4.810000e-86 329.0
28 TraesCS7A01G220700 chr2B 92.632 95 6 1 1448 1541 690727137 690727231 1.120000e-27 135.0
29 TraesCS7A01G220700 chr2B 91.667 96 7 1 1447 1541 690727354 690727259 1.450000e-26 132.0
30 TraesCS7A01G220700 chr2B 92.857 42 3 0 5711 5752 528787873 528787914 1.940000e-05 62.1
31 TraesCS7A01G220700 chrUn 90.076 262 26 0 5756 6017 57543265 57543526 2.220000e-89 340.0
32 TraesCS7A01G220700 chr5D 90.114 263 24 2 5757 6018 500160231 500159970 2.220000e-89 340.0
33 TraesCS7A01G220700 chr5D 88.550 262 28 2 5757 6018 238188985 238188726 3.740000e-82 316.0
34 TraesCS7A01G220700 chr5D 82.955 88 12 2 3237 3323 498660634 498660549 6.910000e-10 76.8
35 TraesCS7A01G220700 chr1D 87.197 289 34 2 5740 6027 397751318 397751032 6.220000e-85 326.0
36 TraesCS7A01G220700 chr1D 100.000 29 0 0 5725 5753 287614350 287614378 3.000000e-03 54.7
37 TraesCS7A01G220700 chr4A 88.593 263 29 1 5755 6017 611226885 611227146 1.040000e-82 318.0
38 TraesCS7A01G220700 chr4B 88.213 263 31 0 5757 6019 387491869 387492131 1.350000e-81 315.0
39 TraesCS7A01G220700 chr4B 91.000 100 8 1 1443 1541 242704829 242704730 4.040000e-27 134.0
40 TraesCS7A01G220700 chr4B 91.579 95 7 1 1448 1541 234357186 234357280 5.230000e-26 130.0
41 TraesCS7A01G220700 chr4B 90.625 96 8 1 1447 1541 242704607 242704702 6.770000e-25 126.0
42 TraesCS7A01G220700 chr3D 87.732 269 33 0 5750 6018 369414430 369414162 1.350000e-81 315.0
43 TraesCS7A01G220700 chr3D 85.034 147 20 1 6284 6430 451894597 451894453 1.440000e-31 148.0
44 TraesCS7A01G220700 chr6D 84.906 265 36 3 5757 6017 69266913 69267177 1.370000e-66 265.0
45 TraesCS7A01G220700 chr5B 87.417 151 17 1 6280 6430 657394848 657394700 8.570000e-39 172.0
46 TraesCS7A01G220700 chr5B 78.261 253 29 16 2224 2468 408395944 408396178 8.690000e-29 139.0
47 TraesCS7A01G220700 chr5B 91.579 95 7 1 1448 1541 482941824 482941918 5.230000e-26 130.0
48 TraesCS7A01G220700 chr5B 91.579 95 5 3 1449 1541 476151633 476151540 1.880000e-25 128.0
49 TraesCS7A01G220700 chr3A 86.275 153 19 1 6278 6430 43016352 43016202 1.430000e-36 165.0
50 TraesCS7A01G220700 chr3A 86.275 153 19 1 6278 6430 43639600 43639450 1.430000e-36 165.0
51 TraesCS7A01G220700 chr3B 84.967 153 21 1 6278 6430 723447549 723447399 3.100000e-33 154.0
52 TraesCS7A01G220700 chr6B 90.625 96 8 1 1447 1541 50833550 50833455 6.770000e-25 126.0
53 TraesCS7A01G220700 chr4D 95.349 43 0 1 5717 5757 497539896 497539854 4.160000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G220700 chr7A 189301717 189308146 6429 False 11875 11875 100.00000 1 6430 1 chr7A.!!$F1 6429
1 TraesCS7A01G220700 chr7D 182341670 182347114 5444 True 3886 6061 92.39350 1 5643 2 chr7D.!!$R2 5642
2 TraesCS7A01G220700 chr7D 182344815 182345659 844 False 375 375 76.03900 1674 2548 1 chr7D.!!$F1 874
3 TraesCS7A01G220700 chr7B 150818506 150823746 5240 True 1719 5258 91.98975 683 5716 4 chr7B.!!$R1 5033
4 TraesCS7A01G220700 chr7B 150835305 150836104 799 True 512 887 92.80550 1 695 2 chr7B.!!$R2 694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
336 343 0.306533 GCCAGCGTTTGTCGAAAGAA 59.693 50.000 0.00 0.0 45.01 2.52 F
1219 1387 0.317020 GAGAAAGTGTGCGTGTTGCC 60.317 55.000 0.00 0.0 45.60 4.52 F
1559 1730 0.106868 CTGGGCCTGAAGATGATGCA 60.107 55.000 4.53 0.0 0.00 3.96 F
2216 2819 0.109964 CATGCCGGTACCAACAAACG 60.110 55.000 13.54 0.0 0.00 3.60 F
2975 3595 1.302949 GGTATTCCTGCCACTGCCA 59.697 57.895 0.00 0.0 36.33 4.92 F
3137 3757 1.884579 ACATGCTGCTGAAACTTGGAG 59.115 47.619 0.00 0.0 0.00 3.86 F
3950 4578 2.614057 GGATTGGTTGCTTATCAGGTCG 59.386 50.000 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1385 1556 0.035739 GGGAGGTAACCGAACTGCAA 59.964 55.000 0.00 0.00 37.17 4.08 R
2767 3387 0.034574 ATGTGTGTGTGTGTGGTGGT 60.035 50.000 0.00 0.00 0.00 4.16 R
2768 3388 1.102154 AATGTGTGTGTGTGTGGTGG 58.898 50.000 0.00 0.00 0.00 4.61 R
3984 4612 3.736759 GGTTCAAGTGAGTCGAAAGAGAC 59.263 47.826 0.00 0.00 43.49 3.36 R
4667 5298 2.289072 GCTTCTTTCCCTTTCCTTTGGC 60.289 50.000 0.00 0.00 0.00 4.52 R
4919 5550 3.241530 AGAACCAGCAGCGGTCCA 61.242 61.111 9.04 0.00 38.76 4.02 R
5432 6063 2.894763 ATGTTTGCACAGCACAACAT 57.105 40.000 18.09 18.09 40.99 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
129 130 1.191489 TGGACATCAGGAGGTGCGAA 61.191 55.000 1.41 0.00 36.22 4.70
226 230 8.454894 TGATCATTCACGTAAGATAGATAGCTC 58.545 37.037 0.00 0.00 43.62 4.09
237 241 9.373603 GTAAGATAGATAGCTCTAATCTGTCGA 57.626 37.037 13.12 5.98 37.52 4.20
283 287 1.300971 GAACATGGAGCGCTGCTTGA 61.301 55.000 38.72 19.29 39.88 3.02
336 343 0.306533 GCCAGCGTTTGTCGAAAGAA 59.693 50.000 0.00 0.00 45.01 2.52
337 344 1.920272 GCCAGCGTTTGTCGAAAGAAC 60.920 52.381 0.00 0.00 45.01 3.01
359 366 3.801594 CGAAACCCCAGAATTTGTTGTTG 59.198 43.478 0.00 0.00 0.00 3.33
372 379 7.986889 AGAATTTGTTGTTGGCATTTTTAGACT 59.013 29.630 0.00 0.00 0.00 3.24
414 423 3.897141 AGCTTTACTACAGGCTCTTCC 57.103 47.619 0.00 0.00 0.00 3.46
470 479 3.308401 GGAAATAATTGATGGGGTGCCT 58.692 45.455 0.00 0.00 0.00 4.75
476 485 2.439156 GATGGGGTGCCTGTCTGC 60.439 66.667 0.00 0.00 0.00 4.26
582 592 1.228124 CCGCAGTTCTGAAACCCCA 60.228 57.895 3.84 0.00 35.92 4.96
583 593 1.237285 CCGCAGTTCTGAAACCCCAG 61.237 60.000 3.84 0.00 35.92 4.45
592 602 3.146066 TCTGAAACCCCAGAATTGAACG 58.854 45.455 0.00 0.00 39.96 3.95
646 756 5.491070 TCTATCTTCACAACATGGACCAAG 58.509 41.667 0.00 0.00 0.00 3.61
654 764 3.136443 ACAACATGGACCAAGAAGAGACA 59.864 43.478 3.17 0.00 0.00 3.41
680 790 3.818961 AGACAATCTTGTTGATGCGTG 57.181 42.857 0.00 0.00 42.43 5.34
691 801 1.236616 TGATGCGTGTGGCTCCAAAG 61.237 55.000 0.00 0.00 44.05 2.77
696 806 1.827789 GTGTGGCTCCAAAGTGGCA 60.828 57.895 0.00 0.00 37.47 4.92
703 813 0.588252 CTCCAAAGTGGCACAAGTCG 59.412 55.000 21.41 2.93 44.16 4.18
762 877 1.152777 TGCAGGGAAACAGGTGTGG 60.153 57.895 0.00 0.00 0.00 4.17
783 908 1.223487 GCCATGGCCCTTCGAGTAA 59.777 57.895 27.24 0.00 34.56 2.24
922 1047 3.829026 CCTTTTCCTTCTCCTTCCCTTTG 59.171 47.826 0.00 0.00 0.00 2.77
968 1100 3.368190 CTCGTCAGGCTCAGGGCAG 62.368 68.421 0.00 0.00 44.01 4.85
980 1112 2.156098 AGGGCAGGAGGAAGCAACA 61.156 57.895 0.00 0.00 0.00 3.33
1051 1195 0.883814 CTGGAGCCTCGCATCATTCC 60.884 60.000 0.00 0.00 0.00 3.01
1056 1200 1.153107 CCTCGCATCATTCCTGCCA 60.153 57.895 0.00 0.00 36.24 4.92
1100 1244 1.002502 GCTCCGCCAAAGGTAACCT 60.003 57.895 0.00 0.00 33.87 3.50
1101 1245 1.305930 GCTCCGCCAAAGGTAACCTG 61.306 60.000 0.00 0.00 32.13 4.00
1120 1270 3.237741 CATCCCCGCCTCTCCCTC 61.238 72.222 0.00 0.00 0.00 4.30
1121 1271 4.924187 ATCCCCGCCTCTCCCTCG 62.924 72.222 0.00 0.00 0.00 4.63
1131 1281 2.190578 CTCCCTCGACCCCAATGC 59.809 66.667 0.00 0.00 0.00 3.56
1133 1283 4.856801 CCCTCGACCCCAATGCCG 62.857 72.222 0.00 0.00 0.00 5.69
1137 1287 3.781307 CGACCCCAATGCCGGAGA 61.781 66.667 5.05 0.00 0.00 3.71
1139 1289 3.699134 GACCCCAATGCCGGAGACC 62.699 68.421 5.05 0.00 0.00 3.85
1144 1294 1.069765 CAATGCCGGAGACCGCTAT 59.930 57.895 5.05 0.00 46.86 2.97
1145 1295 0.532862 CAATGCCGGAGACCGCTATT 60.533 55.000 5.05 4.84 46.86 1.73
1179 1347 5.104374 GCATGGAGTATTTTGTGTTCATGG 58.896 41.667 0.00 0.00 33.50 3.66
1188 1356 1.064003 TGTGTTCATGGTACCCAGCT 58.936 50.000 10.07 0.00 36.75 4.24
1190 1358 2.084546 GTGTTCATGGTACCCAGCTTC 58.915 52.381 10.07 0.00 36.75 3.86
1192 1360 2.308570 TGTTCATGGTACCCAGCTTCAT 59.691 45.455 10.07 0.00 36.75 2.57
1217 1385 1.595489 GCTGAGAAAGTGTGCGTGTTG 60.595 52.381 0.00 0.00 0.00 3.33
1219 1387 0.317020 GAGAAAGTGTGCGTGTTGCC 60.317 55.000 0.00 0.00 45.60 4.52
1367 1538 5.458015 CGACTTACTTTCCCCACATTTTTC 58.542 41.667 0.00 0.00 0.00 2.29
1373 1544 3.951775 TTCCCCACATTTTTCATTCGG 57.048 42.857 0.00 0.00 0.00 4.30
1374 1545 2.175202 TCCCCACATTTTTCATTCGGG 58.825 47.619 0.00 0.00 0.00 5.14
1421 1592 1.565288 TCCCTGCATCATGATGAACCA 59.435 47.619 34.65 22.61 41.20 3.67
1426 1597 3.358118 TGCATCATGATGAACCATGTGT 58.642 40.909 34.65 0.00 43.22 3.72
1432 1603 6.306643 TCATGATGAACCATGTGTAAGGTA 57.693 37.500 0.00 0.00 43.22 3.08
1436 1607 5.247337 TGATGAACCATGTGTAAGGTAGTGA 59.753 40.000 0.00 0.00 37.07 3.41
1439 1610 6.539173 TGAACCATGTGTAAGGTAGTGAAAT 58.461 36.000 0.00 0.00 37.07 2.17
1440 1611 7.681679 TGAACCATGTGTAAGGTAGTGAAATA 58.318 34.615 0.00 0.00 37.07 1.40
1443 1614 8.331730 ACCATGTGTAAGGTAGTGAAATAAAC 57.668 34.615 0.00 0.00 36.07 2.01
1444 1615 8.161425 ACCATGTGTAAGGTAGTGAAATAAACT 58.839 33.333 0.00 0.00 36.07 2.66
1445 1616 8.450964 CCATGTGTAAGGTAGTGAAATAAACTG 58.549 37.037 0.00 0.00 0.00 3.16
1446 1617 9.214957 CATGTGTAAGGTAGTGAAATAAACTGA 57.785 33.333 0.00 0.00 0.00 3.41
1447 1618 8.827177 TGTGTAAGGTAGTGAAATAAACTGAG 57.173 34.615 0.00 0.00 0.00 3.35
1448 1619 7.876068 TGTGTAAGGTAGTGAAATAAACTGAGG 59.124 37.037 0.00 0.00 0.00 3.86
1449 1620 6.877322 TGTAAGGTAGTGAAATAAACTGAGGC 59.123 38.462 0.00 0.00 0.00 4.70
1450 1621 4.844884 AGGTAGTGAAATAAACTGAGGCC 58.155 43.478 0.00 0.00 0.00 5.19
1451 1622 3.945921 GGTAGTGAAATAAACTGAGGCCC 59.054 47.826 0.00 0.00 0.00 5.80
1452 1623 3.806949 AGTGAAATAAACTGAGGCCCA 57.193 42.857 0.00 0.00 0.00 5.36
1462 1633 1.251251 CTGAGGCCCAGTTCTTTTGG 58.749 55.000 11.85 0.00 38.10 3.28
1463 1634 0.827507 TGAGGCCCAGTTCTTTTGGC 60.828 55.000 0.00 0.00 43.26 4.52
1465 1636 2.650778 GCCCAGTTCTTTTGGCCG 59.349 61.111 0.00 0.00 37.94 6.13
1466 1637 1.901464 GCCCAGTTCTTTTGGCCGA 60.901 57.895 0.00 0.00 37.94 5.54
1467 1638 1.250840 GCCCAGTTCTTTTGGCCGAT 61.251 55.000 0.00 0.00 37.94 4.18
1468 1639 1.256812 CCCAGTTCTTTTGGCCGATT 58.743 50.000 0.00 0.00 34.26 3.34
1469 1640 1.202348 CCCAGTTCTTTTGGCCGATTC 59.798 52.381 0.00 0.00 34.26 2.52
1470 1641 2.162681 CCAGTTCTTTTGGCCGATTCT 58.837 47.619 0.00 0.00 0.00 2.40
1471 1642 2.162408 CCAGTTCTTTTGGCCGATTCTC 59.838 50.000 0.00 0.00 0.00 2.87
1472 1643 2.162408 CAGTTCTTTTGGCCGATTCTCC 59.838 50.000 0.00 0.00 0.00 3.71
1473 1644 1.472878 GTTCTTTTGGCCGATTCTCCC 59.527 52.381 0.00 0.00 0.00 4.30
1474 1645 0.695924 TCTTTTGGCCGATTCTCCCA 59.304 50.000 0.00 0.00 0.00 4.37
1475 1646 1.098050 CTTTTGGCCGATTCTCCCAG 58.902 55.000 0.00 0.00 0.00 4.45
1476 1647 0.695924 TTTTGGCCGATTCTCCCAGA 59.304 50.000 0.00 0.00 0.00 3.86
1477 1648 0.253044 TTTGGCCGATTCTCCCAGAG 59.747 55.000 0.00 0.00 0.00 3.35
1478 1649 0.909610 TTGGCCGATTCTCCCAGAGT 60.910 55.000 0.00 0.00 0.00 3.24
1479 1650 1.330655 TGGCCGATTCTCCCAGAGTC 61.331 60.000 0.00 0.00 0.00 3.36
1480 1651 1.045911 GGCCGATTCTCCCAGAGTCT 61.046 60.000 0.00 0.00 29.80 3.24
1481 1652 0.827368 GCCGATTCTCCCAGAGTCTT 59.173 55.000 0.00 0.00 29.80 3.01
1482 1653 1.472376 GCCGATTCTCCCAGAGTCTTG 60.472 57.143 0.00 0.00 29.80 3.02
1483 1654 2.103373 CCGATTCTCCCAGAGTCTTGA 58.897 52.381 0.00 0.00 29.80 3.02
1484 1655 2.100584 CCGATTCTCCCAGAGTCTTGAG 59.899 54.545 9.33 9.33 29.80 3.02
1485 1656 3.020274 CGATTCTCCCAGAGTCTTGAGA 58.980 50.000 12.96 12.96 29.80 3.27
1486 1657 3.445450 CGATTCTCCCAGAGTCTTGAGAA 59.555 47.826 24.07 24.07 45.08 2.87
1488 1659 5.612725 ATTCTCCCAGAGTCTTGAGAATC 57.387 43.478 25.56 0.43 46.36 2.52
1489 1660 3.020274 TCTCCCAGAGTCTTGAGAATCG 58.980 50.000 14.13 0.00 43.22 3.34
1490 1661 3.020274 CTCCCAGAGTCTTGAGAATCGA 58.980 50.000 9.86 0.00 43.22 3.59
1491 1662 2.755655 TCCCAGAGTCTTGAGAATCGAC 59.244 50.000 3.16 0.00 43.22 4.20
1492 1663 2.159170 CCCAGAGTCTTGAGAATCGACC 60.159 54.545 3.16 0.00 43.22 4.79
1493 1664 2.159170 CCAGAGTCTTGAGAATCGACCC 60.159 54.545 3.16 0.00 43.22 4.46
1494 1665 2.757868 CAGAGTCTTGAGAATCGACCCT 59.242 50.000 3.16 0.00 43.22 4.34
1495 1666 3.194542 CAGAGTCTTGAGAATCGACCCTT 59.805 47.826 3.16 0.00 43.22 3.95
1496 1667 3.445805 AGAGTCTTGAGAATCGACCCTTC 59.554 47.826 3.16 0.00 43.22 3.46
1497 1668 3.165875 AGTCTTGAGAATCGACCCTTCA 58.834 45.455 0.00 0.00 38.61 3.02
1498 1669 3.772025 AGTCTTGAGAATCGACCCTTCAT 59.228 43.478 0.00 0.00 38.61 2.57
1499 1670 4.116238 GTCTTGAGAATCGACCCTTCATC 58.884 47.826 0.00 0.00 38.61 2.92
1500 1671 3.133003 TCTTGAGAATCGACCCTTCATCC 59.867 47.826 0.00 0.00 38.61 3.51
1501 1672 2.466846 TGAGAATCGACCCTTCATCCA 58.533 47.619 0.00 0.00 38.61 3.41
1502 1673 2.432146 TGAGAATCGACCCTTCATCCAG 59.568 50.000 0.00 0.00 38.61 3.86
1503 1674 1.139853 AGAATCGACCCTTCATCCAGC 59.860 52.381 0.00 0.00 0.00 4.85
1504 1675 1.139853 GAATCGACCCTTCATCCAGCT 59.860 52.381 0.00 0.00 0.00 4.24
1505 1676 1.207791 ATCGACCCTTCATCCAGCTT 58.792 50.000 0.00 0.00 0.00 3.74
1506 1677 0.984230 TCGACCCTTCATCCAGCTTT 59.016 50.000 0.00 0.00 0.00 3.51
1507 1678 1.351017 TCGACCCTTCATCCAGCTTTT 59.649 47.619 0.00 0.00 0.00 2.27
1508 1679 1.740025 CGACCCTTCATCCAGCTTTTC 59.260 52.381 0.00 0.00 0.00 2.29
1509 1680 2.095461 GACCCTTCATCCAGCTTTTCC 58.905 52.381 0.00 0.00 0.00 3.13
1510 1681 1.713078 ACCCTTCATCCAGCTTTTCCT 59.287 47.619 0.00 0.00 0.00 3.36
1511 1682 2.919602 ACCCTTCATCCAGCTTTTCCTA 59.080 45.455 0.00 0.00 0.00 2.94
1512 1683 3.054065 ACCCTTCATCCAGCTTTTCCTAG 60.054 47.826 0.00 0.00 0.00 3.02
1513 1684 3.200825 CCCTTCATCCAGCTTTTCCTAGA 59.799 47.826 0.00 0.00 0.00 2.43
1514 1685 4.324563 CCCTTCATCCAGCTTTTCCTAGAA 60.325 45.833 0.00 0.00 0.00 2.10
1515 1686 5.444176 CCTTCATCCAGCTTTTCCTAGAAT 58.556 41.667 0.00 0.00 0.00 2.40
1516 1687 5.530543 CCTTCATCCAGCTTTTCCTAGAATC 59.469 44.000 0.00 0.00 0.00 2.52
1517 1688 5.965033 TCATCCAGCTTTTCCTAGAATCT 57.035 39.130 0.00 0.00 0.00 2.40
1518 1689 6.319048 TCATCCAGCTTTTCCTAGAATCTT 57.681 37.500 0.00 0.00 0.00 2.40
1519 1690 6.118170 TCATCCAGCTTTTCCTAGAATCTTG 58.882 40.000 0.00 0.00 0.00 3.02
1520 1691 5.505181 TCCAGCTTTTCCTAGAATCTTGT 57.495 39.130 0.00 0.00 0.00 3.16
1521 1692 6.620877 TCCAGCTTTTCCTAGAATCTTGTA 57.379 37.500 0.00 0.00 0.00 2.41
1522 1693 6.407202 TCCAGCTTTTCCTAGAATCTTGTAC 58.593 40.000 0.00 0.00 0.00 2.90
1523 1694 5.586643 CCAGCTTTTCCTAGAATCTTGTACC 59.413 44.000 0.00 0.00 0.00 3.34
1524 1695 5.586643 CAGCTTTTCCTAGAATCTTGTACCC 59.413 44.000 0.00 0.00 0.00 3.69
1525 1696 5.250774 AGCTTTTCCTAGAATCTTGTACCCA 59.749 40.000 0.00 0.00 0.00 4.51
1526 1697 6.069381 AGCTTTTCCTAGAATCTTGTACCCAT 60.069 38.462 0.00 0.00 0.00 4.00
1527 1698 7.127339 AGCTTTTCCTAGAATCTTGTACCCATA 59.873 37.037 0.00 0.00 0.00 2.74
1528 1699 7.939588 GCTTTTCCTAGAATCTTGTACCCATAT 59.060 37.037 0.00 0.00 0.00 1.78
1529 1700 9.853177 CTTTTCCTAGAATCTTGTACCCATATT 57.147 33.333 0.00 0.00 0.00 1.28
1559 1730 0.106868 CTGGGCCTGAAGATGATGCA 60.107 55.000 4.53 0.00 0.00 3.96
1616 1787 4.046462 CGTTTTTCTCTAGACAACGTGGA 58.954 43.478 0.00 0.00 36.75 4.02
1617 1788 4.085210 CGTTTTTCTCTAGACAACGTGGAC 60.085 45.833 0.00 0.00 36.75 4.02
1633 1852 3.139077 GTGGACCGCCTAATTAATCCAG 58.861 50.000 0.00 0.00 36.92 3.86
1644 1863 7.454260 CCTAATTAATCCAGGCCATTAGTTC 57.546 40.000 5.01 0.00 0.00 3.01
1661 1880 2.044650 CCTGGAGCACATGGGTGG 60.045 66.667 0.00 0.00 45.38 4.61
1665 1884 3.661648 GAGCACATGGGTGGGGGT 61.662 66.667 0.00 0.00 45.38 4.95
1666 1885 3.944250 GAGCACATGGGTGGGGGTG 62.944 68.421 0.00 0.00 45.38 4.61
1667 1886 4.299796 GCACATGGGTGGGGGTGT 62.300 66.667 0.00 0.00 45.38 4.16
1668 1887 2.283101 CACATGGGTGGGGGTGTG 60.283 66.667 0.00 0.00 41.45 3.82
1680 1996 2.202395 GGGTGTGGTGCATGTGCTT 61.202 57.895 6.55 0.00 42.66 3.91
1682 1998 1.081906 GTGTGGTGCATGTGCTTCG 60.082 57.895 6.55 0.00 42.66 3.79
1704 2020 2.830923 AGTGTGTCTTCATCCTCCTCTG 59.169 50.000 0.00 0.00 0.00 3.35
1728 2048 5.072464 GCCCTCCTAAGATTTATGTCTCCTT 59.928 44.000 0.00 0.00 0.00 3.36
1746 2066 5.179368 TCTCCTTAAGTGCTCATCGTTTTTG 59.821 40.000 0.97 0.00 0.00 2.44
1747 2067 4.819630 TCCTTAAGTGCTCATCGTTTTTGT 59.180 37.500 0.97 0.00 0.00 2.83
1774 2094 3.624777 CCCTTCAATGCTTGTACAGGAT 58.375 45.455 9.51 1.50 34.29 3.24
1786 2106 3.220110 TGTACAGGATATCCGTGGAGAC 58.780 50.000 21.88 15.10 42.08 3.36
1814 2134 1.022735 GGAGATCGAAGGCGTACTCA 58.977 55.000 0.00 0.00 39.93 3.41
1815 2135 1.609555 GGAGATCGAAGGCGTACTCAT 59.390 52.381 0.00 0.00 39.93 2.90
1846 2166 2.845659 TCCCAATGGAGCTCCTTCTTA 58.154 47.619 32.28 13.40 35.03 2.10
1847 2167 2.774234 TCCCAATGGAGCTCCTTCTTAG 59.226 50.000 32.28 16.82 35.03 2.18
1848 2168 2.507471 CCCAATGGAGCTCCTTCTTAGT 59.493 50.000 32.28 9.32 36.82 2.24
1849 2169 3.432890 CCCAATGGAGCTCCTTCTTAGTC 60.433 52.174 32.28 4.07 36.82 2.59
1850 2170 3.452474 CAATGGAGCTCCTTCTTAGTCG 58.548 50.000 32.28 8.66 36.82 4.18
1851 2171 2.509166 TGGAGCTCCTTCTTAGTCGA 57.491 50.000 32.28 6.14 36.82 4.20
1852 2172 2.093106 TGGAGCTCCTTCTTAGTCGAC 58.907 52.381 32.28 7.70 36.82 4.20
1853 2173 1.406180 GGAGCTCCTTCTTAGTCGACC 59.594 57.143 26.25 0.00 0.00 4.79
1854 2174 1.064357 GAGCTCCTTCTTAGTCGACCG 59.936 57.143 13.01 0.99 0.00 4.79
1855 2175 0.525882 GCTCCTTCTTAGTCGACCGC 60.526 60.000 13.01 0.00 0.00 5.68
1856 2176 0.248134 CTCCTTCTTAGTCGACCGCG 60.248 60.000 13.01 0.00 39.35 6.46
1857 2177 1.226603 CCTTCTTAGTCGACCGCGG 60.227 63.158 26.86 26.86 38.28 6.46
1861 2181 4.424566 TTAGTCGACCGCGGCCAC 62.425 66.667 28.58 19.28 44.82 5.01
1910 2234 2.089201 CTCAACTCCATCATGCTGCAA 58.911 47.619 6.36 0.00 0.00 4.08
1911 2235 2.688446 CTCAACTCCATCATGCTGCAAT 59.312 45.455 6.36 0.00 0.00 3.56
2079 2675 2.540101 CGCAATTCTAGGAAAGTAGCCG 59.460 50.000 0.00 0.00 0.00 5.52
2172 2768 2.507407 ATGCGGTTGTTGTTCCCTAT 57.493 45.000 0.00 0.00 0.00 2.57
2216 2819 0.109964 CATGCCGGTACCAACAAACG 60.110 55.000 13.54 0.00 0.00 3.60
2328 2931 1.340405 TGGAAGAAGGAGCTCCATTGC 60.340 52.381 33.90 26.90 38.89 3.56
2680 3300 3.480133 GGCACCCAGGCGGTCTAT 61.480 66.667 0.00 0.00 43.58 1.98
2712 3332 4.261801 AGAAAACCGTTACATGCTGCTAT 58.738 39.130 0.00 0.00 0.00 2.97
2744 3364 5.437289 TGCCACTACATCTTCAGTTTTTG 57.563 39.130 0.00 0.00 0.00 2.44
2755 3375 4.583907 TCTTCAGTTTTTGTCATCATGCCA 59.416 37.500 0.00 0.00 0.00 4.92
2756 3376 4.241590 TCAGTTTTTGTCATCATGCCAC 57.758 40.909 0.00 0.00 0.00 5.01
2758 3378 2.299867 AGTTTTTGTCATCATGCCACCC 59.700 45.455 0.00 0.00 0.00 4.61
2776 3396 4.596585 CCCCCACCACCACCACAC 62.597 72.222 0.00 0.00 0.00 3.82
2777 3397 3.814906 CCCCACCACCACCACACA 61.815 66.667 0.00 0.00 0.00 3.72
2778 3398 2.518349 CCCACCACCACCACACAC 60.518 66.667 0.00 0.00 0.00 3.82
2779 3399 2.273776 CCACCACCACCACACACA 59.726 61.111 0.00 0.00 0.00 3.72
2780 3400 2.118404 CCACCACCACCACACACAC 61.118 63.158 0.00 0.00 0.00 3.82
2781 3401 1.377856 CACCACCACCACACACACA 60.378 57.895 0.00 0.00 0.00 3.72
2975 3595 1.302949 GGTATTCCTGCCACTGCCA 59.697 57.895 0.00 0.00 36.33 4.92
3137 3757 1.884579 ACATGCTGCTGAAACTTGGAG 59.115 47.619 0.00 0.00 0.00 3.86
3305 3932 9.525826 TTTTATTGGTTAAATTCATGGCCAAAT 57.474 25.926 10.96 2.35 39.11 2.32
3306 3933 9.525826 TTTATTGGTTAAATTCATGGCCAAATT 57.474 25.926 10.96 9.87 39.11 1.82
3589 4216 4.690748 TGTCGTCAAAATGGAGAATCAGAC 59.309 41.667 0.00 0.00 36.25 3.51
3950 4578 2.614057 GGATTGGTTGCTTATCAGGTCG 59.386 50.000 0.00 0.00 0.00 4.79
4197 4825 7.009999 CGATTATGGCTTCATATGCTAGAAGTC 59.990 40.741 0.00 0.00 44.53 3.01
4489 5120 6.248433 AGACCCATTCAAGTACATGAACATT 58.752 36.000 15.23 0.00 41.78 2.71
4491 5122 7.233348 AGACCCATTCAAGTACATGAACATTTT 59.767 33.333 15.23 0.00 41.78 1.82
4919 5550 0.687354 AGGTGTTCGACTGGATGCTT 59.313 50.000 0.00 0.00 0.00 3.91
5036 5667 1.467342 GAAAAACCGTCGGATTGGGAG 59.533 52.381 20.51 0.00 0.00 4.30
5432 6063 2.353704 GGACGTTGACATGGTCTGATGA 60.354 50.000 0.00 0.00 33.15 2.92
5587 6220 7.734942 TCAGATTGCCCTGTTTCTTTTTATTT 58.265 30.769 0.00 0.00 35.71 1.40
5685 6318 6.034898 GCGAGGTTTGTTTCATTTTGATATGG 59.965 38.462 0.00 0.00 0.00 2.74
5699 6332 3.176411 TGATATGGGCTCCCTATGTCTG 58.824 50.000 6.50 0.00 36.94 3.51
5702 6335 1.668826 TGGGCTCCCTATGTCTGTTT 58.331 50.000 6.50 0.00 36.94 2.83
5770 6403 7.937700 TCATAAGAATTACTCCCTCCATTCT 57.062 36.000 0.00 0.00 37.54 2.40
5771 6404 8.337118 TCATAAGAATTACTCCCTCCATTCTT 57.663 34.615 10.09 10.09 44.46 2.52
5772 6405 8.781951 TCATAAGAATTACTCCCTCCATTCTTT 58.218 33.333 10.41 0.00 41.23 2.52
5773 6406 9.413734 CATAAGAATTACTCCCTCCATTCTTTT 57.586 33.333 10.41 2.10 41.23 2.27
5782 6415 8.582891 ACTCCCTCCATTCTTTTATATAAGGT 57.417 34.615 3.49 0.00 0.00 3.50
5783 6416 8.440771 ACTCCCTCCATTCTTTTATATAAGGTG 58.559 37.037 3.49 3.68 0.00 4.00
5784 6417 8.344939 TCCCTCCATTCTTTTATATAAGGTGT 57.655 34.615 3.49 0.00 0.00 4.16
5785 6418 9.455144 TCCCTCCATTCTTTTATATAAGGTGTA 57.545 33.333 3.49 0.00 0.00 2.90
5819 6452 9.659830 ATTTAAAAGTCAAACGAGTACATGTTC 57.340 29.630 2.30 0.00 0.00 3.18
5820 6453 4.966850 AAGTCAAACGAGTACATGTTCG 57.033 40.909 16.40 16.40 42.26 3.95
5821 6454 4.233123 AGTCAAACGAGTACATGTTCGA 57.767 40.909 23.06 1.62 39.93 3.71
5822 6455 4.806330 AGTCAAACGAGTACATGTTCGAT 58.194 39.130 23.06 11.20 39.93 3.59
5823 6456 4.857588 AGTCAAACGAGTACATGTTCGATC 59.142 41.667 23.06 7.80 39.93 3.69
5824 6457 4.619760 GTCAAACGAGTACATGTTCGATCA 59.380 41.667 23.06 0.00 39.93 2.92
5825 6458 5.118050 GTCAAACGAGTACATGTTCGATCAA 59.882 40.000 23.06 6.41 39.93 2.57
5826 6459 5.344933 TCAAACGAGTACATGTTCGATCAAG 59.655 40.000 23.06 10.16 39.93 3.02
5827 6460 4.436242 ACGAGTACATGTTCGATCAAGT 57.564 40.909 23.06 9.12 39.93 3.16
5828 6461 4.806330 ACGAGTACATGTTCGATCAAGTT 58.194 39.130 23.06 0.00 39.93 2.66
5829 6462 5.227908 ACGAGTACATGTTCGATCAAGTTT 58.772 37.500 23.06 0.00 39.93 2.66
5830 6463 5.694910 ACGAGTACATGTTCGATCAAGTTTT 59.305 36.000 23.06 0.00 39.93 2.43
5831 6464 6.202188 ACGAGTACATGTTCGATCAAGTTTTT 59.798 34.615 23.06 0.00 39.93 1.94
5832 6465 7.383029 ACGAGTACATGTTCGATCAAGTTTTTA 59.617 33.333 23.06 0.00 39.93 1.52
5833 6466 7.893236 CGAGTACATGTTCGATCAAGTTTTTAG 59.107 37.037 13.47 0.00 39.06 1.85
5834 6467 8.827177 AGTACATGTTCGATCAAGTTTTTAGA 57.173 30.769 2.30 0.00 0.00 2.10
5835 6468 9.268268 AGTACATGTTCGATCAAGTTTTTAGAA 57.732 29.630 2.30 0.00 0.00 2.10
5836 6469 9.872757 GTACATGTTCGATCAAGTTTTTAGAAA 57.127 29.630 2.30 0.00 0.00 2.52
5838 6471 9.796120 ACATGTTCGATCAAGTTTTTAGAAAAA 57.204 25.926 0.00 0.00 35.67 1.94
5928 6561 9.764363 TTTATCTACTAGGTATTGCAGATGTTG 57.236 33.333 0.00 0.00 0.00 3.33
5929 6562 6.791867 TCTACTAGGTATTGCAGATGTTGT 57.208 37.500 0.00 0.00 0.00 3.32
5930 6563 7.182817 TCTACTAGGTATTGCAGATGTTGTT 57.817 36.000 0.00 0.00 0.00 2.83
5931 6564 8.301252 TCTACTAGGTATTGCAGATGTTGTTA 57.699 34.615 0.00 0.00 0.00 2.41
5932 6565 8.924303 TCTACTAGGTATTGCAGATGTTGTTAT 58.076 33.333 0.00 0.00 0.00 1.89
5933 6566 9.547753 CTACTAGGTATTGCAGATGTTGTTATT 57.452 33.333 0.00 0.00 0.00 1.40
5934 6567 8.807948 ACTAGGTATTGCAGATGTTGTTATTT 57.192 30.769 0.00 0.00 0.00 1.40
5935 6568 9.243105 ACTAGGTATTGCAGATGTTGTTATTTT 57.757 29.630 0.00 0.00 0.00 1.82
5970 6603 9.829507 ACATTGGTCAAACTTTAAAATGATTGA 57.170 25.926 0.00 0.00 0.00 2.57
5973 6606 9.883142 TTGGTCAAACTTTAAAATGATTGACTT 57.117 25.926 20.22 0.00 41.40 3.01
5974 6607 9.311916 TGGTCAAACTTTAAAATGATTGACTTG 57.688 29.630 20.22 1.48 41.40 3.16
5975 6608 8.275632 GGTCAAACTTTAAAATGATTGACTTGC 58.724 33.333 20.22 8.65 41.40 4.01
5976 6609 8.816144 GTCAAACTTTAAAATGATTGACTTGCA 58.184 29.630 16.65 0.00 39.99 4.08
5977 6610 9.545105 TCAAACTTTAAAATGATTGACTTGCAT 57.455 25.926 0.00 0.00 0.00 3.96
5978 6611 9.588774 CAAACTTTAAAATGATTGACTTGCATG 57.411 29.630 0.00 0.00 0.00 4.06
5979 6612 9.545105 AAACTTTAAAATGATTGACTTGCATGA 57.455 25.926 6.60 0.00 0.00 3.07
5980 6613 9.545105 AACTTTAAAATGATTGACTTGCATGAA 57.455 25.926 6.60 0.00 0.00 2.57
5981 6614 9.545105 ACTTTAAAATGATTGACTTGCATGAAA 57.455 25.926 6.60 0.00 0.00 2.69
5984 6617 6.790285 AAATGATTGACTTGCATGAAAACC 57.210 33.333 6.60 0.00 0.00 3.27
5985 6618 4.933505 TGATTGACTTGCATGAAAACCA 57.066 36.364 6.60 0.00 0.00 3.67
5986 6619 5.273674 TGATTGACTTGCATGAAAACCAA 57.726 34.783 6.60 0.00 0.00 3.67
5987 6620 5.856156 TGATTGACTTGCATGAAAACCAAT 58.144 33.333 6.60 10.96 0.00 3.16
5988 6621 6.990798 TGATTGACTTGCATGAAAACCAATA 58.009 32.000 6.60 1.82 0.00 1.90
5989 6622 6.867816 TGATTGACTTGCATGAAAACCAATAC 59.132 34.615 6.60 7.42 0.00 1.89
5990 6623 5.781210 TGACTTGCATGAAAACCAATACA 57.219 34.783 6.60 0.00 0.00 2.29
5991 6624 5.527951 TGACTTGCATGAAAACCAATACAC 58.472 37.500 6.60 0.00 0.00 2.90
5992 6625 4.881920 ACTTGCATGAAAACCAATACACC 58.118 39.130 6.60 0.00 0.00 4.16
5993 6626 4.588528 ACTTGCATGAAAACCAATACACCT 59.411 37.500 6.60 0.00 0.00 4.00
5994 6627 5.070313 ACTTGCATGAAAACCAATACACCTT 59.930 36.000 6.60 0.00 0.00 3.50
5995 6628 6.266558 ACTTGCATGAAAACCAATACACCTTA 59.733 34.615 6.60 0.00 0.00 2.69
5996 6629 6.849085 TGCATGAAAACCAATACACCTTAT 57.151 33.333 0.00 0.00 0.00 1.73
5997 6630 7.946381 TGCATGAAAACCAATACACCTTATA 57.054 32.000 0.00 0.00 0.00 0.98
5998 6631 8.532186 TGCATGAAAACCAATACACCTTATAT 57.468 30.769 0.00 0.00 0.00 0.86
5999 6632 8.976353 TGCATGAAAACCAATACACCTTATATT 58.024 29.630 0.00 0.00 0.00 1.28
6000 6633 9.463443 GCATGAAAACCAATACACCTTATATTC 57.537 33.333 0.00 0.00 0.00 1.75
6003 6636 9.184523 TGAAAACCAATACACCTTATATTCTGG 57.815 33.333 0.00 0.00 0.00 3.86
6004 6637 9.403583 GAAAACCAATACACCTTATATTCTGGA 57.596 33.333 0.00 0.00 0.00 3.86
6005 6638 9.762381 AAAACCAATACACCTTATATTCTGGAA 57.238 29.630 0.00 0.00 0.00 3.53
6006 6639 8.747538 AACCAATACACCTTATATTCTGGAAC 57.252 34.615 0.00 0.00 0.00 3.62
6007 6640 7.867921 ACCAATACACCTTATATTCTGGAACA 58.132 34.615 0.00 0.00 0.00 3.18
6027 6660 8.904834 TGGAACAGAGAGAGTATAATACAAGAC 58.095 37.037 0.00 0.00 0.00 3.01
6028 6661 8.354426 GGAACAGAGAGAGTATAATACAAGACC 58.646 40.741 0.00 0.00 0.00 3.85
6029 6662 7.499321 ACAGAGAGAGTATAATACAAGACCG 57.501 40.000 0.00 0.00 0.00 4.79
6030 6663 7.055378 ACAGAGAGAGTATAATACAAGACCGT 58.945 38.462 0.00 0.00 0.00 4.83
6031 6664 7.556996 ACAGAGAGAGTATAATACAAGACCGTT 59.443 37.037 0.00 0.00 0.00 4.44
6032 6665 8.407064 CAGAGAGAGTATAATACAAGACCGTTT 58.593 37.037 0.00 0.00 0.00 3.60
6033 6666 8.623030 AGAGAGAGTATAATACAAGACCGTTTC 58.377 37.037 0.00 0.00 0.00 2.78
6034 6667 8.522542 AGAGAGTATAATACAAGACCGTTTCT 57.477 34.615 0.00 0.00 35.32 2.52
6035 6668 8.968969 AGAGAGTATAATACAAGACCGTTTCTT 58.031 33.333 0.00 0.00 46.29 2.52
6036 6669 9.583765 GAGAGTATAATACAAGACCGTTTCTTT 57.416 33.333 0.00 0.00 42.37 2.52
6037 6670 9.939802 AGAGTATAATACAAGACCGTTTCTTTT 57.060 29.630 0.00 0.00 42.37 2.27
6042 6675 6.937436 ATACAAGACCGTTTCTTTTTGTCT 57.063 33.333 0.00 0.00 42.37 3.41
6043 6676 4.981794 ACAAGACCGTTTCTTTTTGTCTG 58.018 39.130 0.00 0.00 42.37 3.51
6044 6677 3.692791 AGACCGTTTCTTTTTGTCTGC 57.307 42.857 0.00 0.00 35.12 4.26
6045 6678 3.013921 AGACCGTTTCTTTTTGTCTGCA 58.986 40.909 0.00 0.00 35.12 4.41
6046 6679 3.632145 AGACCGTTTCTTTTTGTCTGCAT 59.368 39.130 0.00 0.00 35.12 3.96
6047 6680 4.819630 AGACCGTTTCTTTTTGTCTGCATA 59.180 37.500 0.00 0.00 35.12 3.14
6048 6681 5.473504 AGACCGTTTCTTTTTGTCTGCATAT 59.526 36.000 0.00 0.00 35.12 1.78
6049 6682 6.653320 AGACCGTTTCTTTTTGTCTGCATATA 59.347 34.615 0.00 0.00 35.12 0.86
6050 6683 7.174253 AGACCGTTTCTTTTTGTCTGCATATAA 59.826 33.333 0.00 0.00 35.12 0.98
6051 6684 7.305474 ACCGTTTCTTTTTGTCTGCATATAAG 58.695 34.615 0.00 0.00 0.00 1.73
6052 6685 7.174253 ACCGTTTCTTTTTGTCTGCATATAAGA 59.826 33.333 0.00 0.00 0.00 2.10
6053 6686 8.184192 CCGTTTCTTTTTGTCTGCATATAAGAT 58.816 33.333 0.00 0.00 0.00 2.40
6054 6687 9.559958 CGTTTCTTTTTGTCTGCATATAAGATT 57.440 29.630 0.00 0.00 0.00 2.40
6064 6697 9.399797 TGTCTGCATATAAGATTTGATCAAAGT 57.600 29.630 24.17 14.86 33.32 2.66
6065 6698 9.875675 GTCTGCATATAAGATTTGATCAAAGTC 57.124 33.333 24.17 19.70 33.32 3.01
6066 6699 9.617523 TCTGCATATAAGATTTGATCAAAGTCA 57.382 29.630 24.17 11.02 33.32 3.41
6076 6709 9.874205 AGATTTGATCAAAGTCAAACTTTTTGA 57.126 25.926 24.17 0.00 45.38 2.69
6079 6712 9.487790 TTTGATCAAAGTCAAACTTTTTGAACT 57.512 25.926 16.91 1.61 45.38 3.01
6080 6713 9.487790 TTGATCAAAGTCAAACTTTTTGAACTT 57.512 25.926 5.45 6.74 45.38 2.66
6081 6714 9.487790 TGATCAAAGTCAAACTTTTTGAACTTT 57.512 25.926 15.68 15.68 45.38 2.66
6082 6715 9.745323 GATCAAAGTCAAACTTTTTGAACTTTG 57.255 29.630 26.50 26.50 45.38 2.77
6083 6716 8.879342 TCAAAGTCAAACTTTTTGAACTTTGA 57.121 26.923 28.32 28.32 45.38 2.69
6084 6717 8.760569 TCAAAGTCAAACTTTTTGAACTTTGAC 58.239 29.630 28.32 20.20 45.38 3.18
6252 6885 9.076596 GTTTGACTTTGACCAAATCTAATATGC 57.923 33.333 0.00 0.00 35.14 3.14
6253 6886 7.936496 TGACTTTGACCAAATCTAATATGCA 57.064 32.000 0.00 0.00 0.00 3.96
6254 6887 7.988737 TGACTTTGACCAAATCTAATATGCAG 58.011 34.615 0.00 0.00 0.00 4.41
6255 6888 7.828717 TGACTTTGACCAAATCTAATATGCAGA 59.171 33.333 0.00 0.00 0.00 4.26
6256 6889 7.989826 ACTTTGACCAAATCTAATATGCAGAC 58.010 34.615 0.00 0.00 0.00 3.51
6257 6890 7.831193 ACTTTGACCAAATCTAATATGCAGACT 59.169 33.333 0.00 0.00 0.00 3.24
6258 6891 9.330063 CTTTGACCAAATCTAATATGCAGACTA 57.670 33.333 0.00 0.00 0.00 2.59
6259 6892 9.679661 TTTGACCAAATCTAATATGCAGACTAA 57.320 29.630 0.00 0.00 0.00 2.24
6260 6893 9.679661 TTGACCAAATCTAATATGCAGACTAAA 57.320 29.630 0.00 0.00 0.00 1.85
6261 6894 9.679661 TGACCAAATCTAATATGCAGACTAAAA 57.320 29.630 0.00 0.00 0.00 1.52
6269 6902 8.879759 TCTAATATGCAGACTAAAAAGAAACGG 58.120 33.333 0.00 0.00 0.00 4.44
6270 6903 7.681939 AATATGCAGACTAAAAAGAAACGGA 57.318 32.000 0.00 0.00 0.00 4.69
6271 6904 5.613358 ATGCAGACTAAAAAGAAACGGAG 57.387 39.130 0.00 0.00 0.00 4.63
6272 6905 3.813166 TGCAGACTAAAAAGAAACGGAGG 59.187 43.478 0.00 0.00 0.00 4.30
6273 6906 3.188667 GCAGACTAAAAAGAAACGGAGGG 59.811 47.826 0.00 0.00 0.00 4.30
6274 6907 4.638304 CAGACTAAAAAGAAACGGAGGGA 58.362 43.478 0.00 0.00 0.00 4.20
6275 6908 4.691216 CAGACTAAAAAGAAACGGAGGGAG 59.309 45.833 0.00 0.00 0.00 4.30
6276 6909 4.347292 AGACTAAAAAGAAACGGAGGGAGT 59.653 41.667 0.00 0.00 0.00 3.85
6277 6910 5.541484 AGACTAAAAAGAAACGGAGGGAGTA 59.459 40.000 0.00 0.00 0.00 2.59
6278 6911 5.791666 ACTAAAAAGAAACGGAGGGAGTAG 58.208 41.667 0.00 0.00 0.00 2.57
6279 6912 4.968971 AAAAAGAAACGGAGGGAGTAGA 57.031 40.909 0.00 0.00 0.00 2.59
6280 6913 4.968971 AAAAGAAACGGAGGGAGTAGAA 57.031 40.909 0.00 0.00 0.00 2.10
6281 6914 3.957591 AAGAAACGGAGGGAGTAGAAC 57.042 47.619 0.00 0.00 0.00 3.01
6282 6915 2.885616 AGAAACGGAGGGAGTAGAACA 58.114 47.619 0.00 0.00 0.00 3.18
6283 6916 2.561858 AGAAACGGAGGGAGTAGAACAC 59.438 50.000 0.00 0.00 0.00 3.32
6284 6917 2.305858 AACGGAGGGAGTAGAACACT 57.694 50.000 0.00 0.00 41.47 3.55
6285 6918 3.446442 AACGGAGGGAGTAGAACACTA 57.554 47.619 0.00 0.00 37.72 2.74
6286 6919 3.666345 ACGGAGGGAGTAGAACACTAT 57.334 47.619 0.00 0.00 37.72 2.12
6287 6920 3.553904 ACGGAGGGAGTAGAACACTATC 58.446 50.000 0.00 0.00 37.72 2.08
6288 6921 2.885894 CGGAGGGAGTAGAACACTATCC 59.114 54.545 0.00 0.00 37.72 2.59
6289 6922 3.435313 CGGAGGGAGTAGAACACTATCCT 60.435 52.174 0.00 0.00 41.27 3.24
6290 6923 4.548669 GGAGGGAGTAGAACACTATCCTT 58.451 47.826 0.00 0.00 39.67 3.36
6291 6924 4.963628 GGAGGGAGTAGAACACTATCCTTT 59.036 45.833 0.00 0.00 39.67 3.11
6292 6925 5.163395 GGAGGGAGTAGAACACTATCCTTTG 60.163 48.000 0.00 0.00 39.67 2.77
6293 6926 4.162509 AGGGAGTAGAACACTATCCTTTGC 59.837 45.833 0.00 0.00 37.60 3.68
6294 6927 4.081087 GGGAGTAGAACACTATCCTTTGCA 60.081 45.833 0.00 0.00 37.72 4.08
6295 6928 4.870991 GGAGTAGAACACTATCCTTTGCAC 59.129 45.833 0.00 0.00 37.72 4.57
6296 6929 5.479306 GAGTAGAACACTATCCTTTGCACA 58.521 41.667 0.00 0.00 37.72 4.57
6297 6930 5.865085 AGTAGAACACTATCCTTTGCACAA 58.135 37.500 0.00 0.00 34.98 3.33
6298 6931 6.296026 AGTAGAACACTATCCTTTGCACAAA 58.704 36.000 0.00 0.00 34.98 2.83
6299 6932 5.695851 AGAACACTATCCTTTGCACAAAG 57.304 39.130 14.79 14.79 45.47 2.77
6300 6933 7.689313 AGTAGAACACTATCCTTTGCACAAAGA 60.689 37.037 21.70 10.20 42.03 2.52
6309 6942 1.634702 TTGCACAAAGAAACAACGGC 58.365 45.000 0.00 0.00 0.00 5.68
6310 6943 0.179124 TGCACAAAGAAACAACGGCC 60.179 50.000 0.00 0.00 0.00 6.13
6311 6944 0.179124 GCACAAAGAAACAACGGCCA 60.179 50.000 2.24 0.00 0.00 5.36
6312 6945 1.737363 GCACAAAGAAACAACGGCCAA 60.737 47.619 2.24 0.00 0.00 4.52
6313 6946 2.192624 CACAAAGAAACAACGGCCAAG 58.807 47.619 2.24 0.00 0.00 3.61
6314 6947 2.096248 ACAAAGAAACAACGGCCAAGA 58.904 42.857 2.24 0.00 0.00 3.02
6315 6948 2.494073 ACAAAGAAACAACGGCCAAGAA 59.506 40.909 2.24 0.00 0.00 2.52
6316 6949 3.115554 CAAAGAAACAACGGCCAAGAAG 58.884 45.455 2.24 0.00 0.00 2.85
6317 6950 2.052782 AGAAACAACGGCCAAGAAGT 57.947 45.000 2.24 0.00 0.00 3.01
6318 6951 3.202829 AGAAACAACGGCCAAGAAGTA 57.797 42.857 2.24 0.00 0.00 2.24
6319 6952 3.547746 AGAAACAACGGCCAAGAAGTAA 58.452 40.909 2.24 0.00 0.00 2.24
6320 6953 3.949113 AGAAACAACGGCCAAGAAGTAAA 59.051 39.130 2.24 0.00 0.00 2.01
6321 6954 4.399934 AGAAACAACGGCCAAGAAGTAAAA 59.600 37.500 2.24 0.00 0.00 1.52
6322 6955 4.929819 AACAACGGCCAAGAAGTAAAAT 57.070 36.364 2.24 0.00 0.00 1.82
6323 6956 4.929819 ACAACGGCCAAGAAGTAAAATT 57.070 36.364 2.24 0.00 0.00 1.82
6324 6957 6.394025 AACAACGGCCAAGAAGTAAAATTA 57.606 33.333 2.24 0.00 0.00 1.40
6325 6958 5.765176 ACAACGGCCAAGAAGTAAAATTAC 58.235 37.500 2.24 0.00 0.00 1.89
6326 6959 5.299782 ACAACGGCCAAGAAGTAAAATTACA 59.700 36.000 2.24 0.00 36.12 2.41
6327 6960 6.183360 ACAACGGCCAAGAAGTAAAATTACAA 60.183 34.615 2.24 0.00 36.12 2.41
6328 6961 6.394025 ACGGCCAAGAAGTAAAATTACAAA 57.606 33.333 2.24 0.00 36.12 2.83
6329 6962 6.210796 ACGGCCAAGAAGTAAAATTACAAAC 58.789 36.000 2.24 0.00 36.12 2.93
6330 6963 6.183360 ACGGCCAAGAAGTAAAATTACAAACA 60.183 34.615 2.24 0.00 36.12 2.83
6331 6964 6.697892 CGGCCAAGAAGTAAAATTACAAACAA 59.302 34.615 2.24 0.00 36.12 2.83
6332 6965 7.096230 CGGCCAAGAAGTAAAATTACAAACAAG 60.096 37.037 2.24 0.00 36.12 3.16
6333 6966 7.923878 GGCCAAGAAGTAAAATTACAAACAAGA 59.076 33.333 0.00 0.00 36.12 3.02
6334 6967 8.752254 GCCAAGAAGTAAAATTACAAACAAGAC 58.248 33.333 6.13 0.00 36.12 3.01
6335 6968 9.244799 CCAAGAAGTAAAATTACAAACAAGACC 57.755 33.333 6.13 0.00 36.12 3.85
6336 6969 9.796120 CAAGAAGTAAAATTACAAACAAGACCA 57.204 29.630 6.13 0.00 36.12 4.02
6369 7002 2.875080 GAACTTGATTCCAACGTCCG 57.125 50.000 0.00 0.00 0.00 4.79
6370 7003 2.140717 GAACTTGATTCCAACGTCCGT 58.859 47.619 0.00 0.00 0.00 4.69
6371 7004 1.792006 ACTTGATTCCAACGTCCGTC 58.208 50.000 0.00 0.00 0.00 4.79
6372 7005 1.069513 ACTTGATTCCAACGTCCGTCA 59.930 47.619 0.00 0.00 0.00 4.35
6373 7006 1.459592 CTTGATTCCAACGTCCGTCAC 59.540 52.381 0.00 0.00 0.00 3.67
6374 7007 0.320073 TGATTCCAACGTCCGTCACC 60.320 55.000 0.00 0.00 0.00 4.02
6375 7008 0.037605 GATTCCAACGTCCGTCACCT 60.038 55.000 0.00 0.00 0.00 4.00
6376 7009 0.320421 ATTCCAACGTCCGTCACCTG 60.320 55.000 0.00 0.00 0.00 4.00
6377 7010 2.981977 TTCCAACGTCCGTCACCTGC 62.982 60.000 0.00 0.00 0.00 4.85
6378 7011 3.041940 CAACGTCCGTCACCTGCC 61.042 66.667 0.00 0.00 0.00 4.85
6379 7012 3.231736 AACGTCCGTCACCTGCCT 61.232 61.111 0.00 0.00 0.00 4.75
6380 7013 3.222354 AACGTCCGTCACCTGCCTC 62.222 63.158 0.00 0.00 0.00 4.70
6381 7014 3.374402 CGTCCGTCACCTGCCTCT 61.374 66.667 0.00 0.00 0.00 3.69
6382 7015 2.262915 GTCCGTCACCTGCCTCTG 59.737 66.667 0.00 0.00 0.00 3.35
6383 7016 2.997315 TCCGTCACCTGCCTCTGG 60.997 66.667 0.00 0.00 0.00 3.86
6394 7027 2.033141 CCTCTGGCACCACCACAG 59.967 66.667 0.00 0.00 46.36 3.66
6395 7028 2.519622 CCTCTGGCACCACCACAGA 61.520 63.158 0.00 0.00 46.36 3.41
6396 7029 1.451504 CTCTGGCACCACCACAGAA 59.548 57.895 0.00 0.00 46.36 3.02
6397 7030 0.604780 CTCTGGCACCACCACAGAAG 60.605 60.000 0.00 0.00 46.36 2.85
6398 7031 2.203337 TGGCACCACCACAGAAGC 60.203 61.111 0.00 0.00 46.36 3.86
6399 7032 2.985847 GGCACCACCACAGAAGCC 60.986 66.667 0.00 0.00 38.86 4.35
6400 7033 2.203337 GCACCACCACAGAAGCCA 60.203 61.111 0.00 0.00 0.00 4.75
6401 7034 2.555547 GCACCACCACAGAAGCCAC 61.556 63.158 0.00 0.00 0.00 5.01
6402 7035 1.152984 CACCACCACAGAAGCCACA 60.153 57.895 0.00 0.00 0.00 4.17
6403 7036 1.149174 ACCACCACAGAAGCCACAG 59.851 57.895 0.00 0.00 0.00 3.66
6404 7037 1.344953 ACCACCACAGAAGCCACAGA 61.345 55.000 0.00 0.00 0.00 3.41
6405 7038 0.179020 CCACCACAGAAGCCACAGAA 60.179 55.000 0.00 0.00 0.00 3.02
6406 7039 1.233019 CACCACAGAAGCCACAGAAG 58.767 55.000 0.00 0.00 0.00 2.85
6407 7040 0.109342 ACCACAGAAGCCACAGAAGG 59.891 55.000 0.00 0.00 0.00 3.46
6408 7041 0.397941 CCACAGAAGCCACAGAAGGA 59.602 55.000 0.00 0.00 0.00 3.36
6409 7042 1.202806 CCACAGAAGCCACAGAAGGAA 60.203 52.381 0.00 0.00 0.00 3.36
6410 7043 2.575532 CACAGAAGCCACAGAAGGAAA 58.424 47.619 0.00 0.00 0.00 3.13
6411 7044 2.951642 CACAGAAGCCACAGAAGGAAAA 59.048 45.455 0.00 0.00 0.00 2.29
6412 7045 3.381272 CACAGAAGCCACAGAAGGAAAAA 59.619 43.478 0.00 0.00 0.00 1.94
6429 7062 3.433306 AAAAATGACGGATCACCTCCA 57.567 42.857 0.00 0.00 45.24 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
226 230 1.300233 GCCGCCCTCGACAGATTAG 60.300 63.158 0.00 0.00 38.10 1.73
253 257 0.178767 TCCATGTTCAGATGGCCTCG 59.821 55.000 3.32 0.00 42.52 4.63
283 287 0.395312 CTGGAAACCGGTACACAGGT 59.605 55.000 8.00 0.00 46.34 4.00
319 326 1.256895 TCGTTCTTTCGACAAACGCTG 59.743 47.619 16.90 0.00 43.95 5.18
336 343 3.028130 ACAACAAATTCTGGGGTTTCGT 58.972 40.909 0.00 0.00 0.00 3.85
337 344 3.726291 ACAACAAATTCTGGGGTTTCG 57.274 42.857 0.00 0.00 0.00 3.46
414 423 1.048601 AGGTATAGCATGTGACGGGG 58.951 55.000 4.48 0.00 0.00 5.73
470 479 2.237143 CAGGAAATAGGGACAGCAGACA 59.763 50.000 0.00 0.00 0.00 3.41
476 485 3.611766 AACGTCAGGAAATAGGGACAG 57.388 47.619 0.00 0.00 0.00 3.51
565 575 0.250295 TCTGGGGTTTCAGAACTGCG 60.250 55.000 0.00 0.00 40.43 5.18
582 592 7.259290 AGTCAAACAATACACGTTCAATTCT 57.741 32.000 0.00 0.00 0.00 2.40
583 593 7.908193 AAGTCAAACAATACACGTTCAATTC 57.092 32.000 0.00 0.00 0.00 2.17
585 595 7.431084 GTCAAAGTCAAACAATACACGTTCAAT 59.569 33.333 0.00 0.00 0.00 2.57
586 596 6.743627 GTCAAAGTCAAACAATACACGTTCAA 59.256 34.615 0.00 0.00 0.00 2.69
588 598 5.679792 GGTCAAAGTCAAACAATACACGTTC 59.320 40.000 0.00 0.00 0.00 3.95
589 599 5.355910 AGGTCAAAGTCAAACAATACACGTT 59.644 36.000 0.00 0.00 0.00 3.99
591 601 5.418310 AGGTCAAAGTCAAACAATACACG 57.582 39.130 0.00 0.00 0.00 4.49
592 602 8.324163 AGATAGGTCAAAGTCAAACAATACAC 57.676 34.615 0.00 0.00 0.00 2.90
646 756 6.484977 ACAAGATTGTCTTCCTTTGTCTCTTC 59.515 38.462 0.00 0.00 36.50 2.87
654 764 5.563475 CGCATCAACAAGATTGTCTTCCTTT 60.563 40.000 0.00 0.00 41.31 3.11
680 790 1.391157 TTGTGCCACTTTGGAGCCAC 61.391 55.000 0.00 0.00 40.96 5.01
691 801 2.094762 ATTCCTACGACTTGTGCCAC 57.905 50.000 0.00 0.00 0.00 5.01
696 806 3.999046 ACGGAAAATTCCTACGACTTGT 58.001 40.909 10.31 0.00 45.33 3.16
703 813 2.846693 CGCACAACGGAAAATTCCTAC 58.153 47.619 10.31 0.00 45.33 3.18
762 877 4.467084 TCGAAGGGCCATGGCGAC 62.467 66.667 29.90 24.14 43.06 5.19
783 908 1.214373 CCAGCGCACGCACAATTTTT 61.214 50.000 18.24 0.00 44.88 1.94
855 980 4.500116 GTGAGAGTCCCGAGCGGC 62.500 72.222 2.79 0.00 0.00 6.53
888 1013 1.019805 GGAAAAGGAAGACGCCGGAG 61.020 60.000 5.05 3.72 0.00 4.63
922 1047 2.224402 ACAGAGAGCTTGAAACCCAGAC 60.224 50.000 0.00 0.00 0.00 3.51
968 1100 1.527433 GCCAACCTGTTGCTTCCTCC 61.527 60.000 4.48 0.00 39.16 4.30
1043 1187 2.947652 ACGAAGAATGGCAGGAATGATG 59.052 45.455 0.00 0.00 0.00 3.07
1044 1188 3.209410 GACGAAGAATGGCAGGAATGAT 58.791 45.455 0.00 0.00 0.00 2.45
1051 1195 0.539051 AGGAGGACGAAGAATGGCAG 59.461 55.000 0.00 0.00 0.00 4.85
1056 1200 0.827368 GCAGGAGGAGGACGAAGAAT 59.173 55.000 0.00 0.00 0.00 2.40
1120 1270 3.781307 TCTCCGGCATTGGGGTCG 61.781 66.667 0.00 0.00 35.23 4.79
1121 1271 2.124695 GTCTCCGGCATTGGGGTC 60.125 66.667 0.00 0.00 0.00 4.46
1122 1272 3.728373 GGTCTCCGGCATTGGGGT 61.728 66.667 0.00 0.00 0.00 4.95
1160 1324 6.190954 GGTACCATGAACACAAAATACTCC 57.809 41.667 7.15 0.00 0.00 3.85
1179 1347 1.133976 AGCCATCATGAAGCTGGGTAC 60.134 52.381 19.63 3.07 42.08 3.34
1188 1356 3.754850 CACACTTTCTCAGCCATCATGAA 59.245 43.478 0.00 0.00 0.00 2.57
1190 1358 2.159421 GCACACTTTCTCAGCCATCATG 60.159 50.000 0.00 0.00 0.00 3.07
1192 1360 1.527034 GCACACTTTCTCAGCCATCA 58.473 50.000 0.00 0.00 0.00 3.07
1217 1385 1.610522 TCAGAAGAGCTGCAAAAAGGC 59.389 47.619 1.02 0.00 44.52 4.35
1219 1387 3.425892 CCGATCAGAAGAGCTGCAAAAAG 60.426 47.826 1.02 0.00 44.52 2.27
1250 1421 4.174129 GGAAAACGATGGCCGCGG 62.174 66.667 24.05 24.05 43.32 6.46
1308 1479 1.135257 CAGCAGTAGGTCCAGACGAAG 60.135 57.143 0.00 0.00 0.00 3.79
1385 1556 0.035739 GGGAGGTAACCGAACTGCAA 59.964 55.000 0.00 0.00 37.17 4.08
1386 1557 0.834687 AGGGAGGTAACCGAACTGCA 60.835 55.000 0.00 0.00 37.17 4.41
1387 1558 0.391263 CAGGGAGGTAACCGAACTGC 60.391 60.000 0.00 0.00 37.17 4.40
1388 1559 0.391263 GCAGGGAGGTAACCGAACTG 60.391 60.000 0.00 0.00 37.17 3.16
1389 1560 0.834687 TGCAGGGAGGTAACCGAACT 60.835 55.000 0.00 0.00 37.17 3.01
1390 1561 0.252197 ATGCAGGGAGGTAACCGAAC 59.748 55.000 0.00 0.00 37.17 3.95
1391 1562 0.539986 GATGCAGGGAGGTAACCGAA 59.460 55.000 0.00 0.00 37.17 4.30
1392 1563 0.616395 TGATGCAGGGAGGTAACCGA 60.616 55.000 0.00 0.00 37.17 4.69
1393 1564 0.469917 ATGATGCAGGGAGGTAACCG 59.530 55.000 0.00 0.00 37.17 4.44
1394 1565 1.490490 TCATGATGCAGGGAGGTAACC 59.510 52.381 0.00 0.00 37.17 2.85
1421 1592 9.436957 CTCAGTTTATTTCACTACCTTACACAT 57.563 33.333 0.00 0.00 0.00 3.21
1426 1597 6.412214 GGCCTCAGTTTATTTCACTACCTTA 58.588 40.000 0.00 0.00 0.00 2.69
1432 1603 3.690460 CTGGGCCTCAGTTTATTTCACT 58.310 45.455 4.53 0.00 38.64 3.41
1444 1615 0.827507 GCCAAAAGAACTGGGCCTCA 60.828 55.000 4.53 0.00 40.55 3.86
1445 1616 1.967535 GCCAAAAGAACTGGGCCTC 59.032 57.895 4.53 0.00 40.55 4.70
1446 1617 4.198087 GCCAAAAGAACTGGGCCT 57.802 55.556 4.53 0.00 40.55 5.19
1449 1620 1.202348 GAATCGGCCAAAAGAACTGGG 59.798 52.381 2.24 0.00 34.25 4.45
1450 1621 2.162408 GAGAATCGGCCAAAAGAACTGG 59.838 50.000 2.24 0.00 36.99 4.00
1451 1622 2.162408 GGAGAATCGGCCAAAAGAACTG 59.838 50.000 2.24 0.00 34.37 3.16
1452 1623 2.437413 GGAGAATCGGCCAAAAGAACT 58.563 47.619 2.24 0.00 34.37 3.01
1453 1624 1.472878 GGGAGAATCGGCCAAAAGAAC 59.527 52.381 2.24 0.00 34.37 3.01
1454 1625 1.074727 TGGGAGAATCGGCCAAAAGAA 59.925 47.619 2.24 0.00 34.37 2.52
1455 1626 0.695924 TGGGAGAATCGGCCAAAAGA 59.304 50.000 2.24 0.00 34.37 2.52
1456 1627 1.098050 CTGGGAGAATCGGCCAAAAG 58.902 55.000 2.24 0.00 34.37 2.27
1457 1628 0.695924 TCTGGGAGAATCGGCCAAAA 59.304 50.000 2.24 0.00 34.37 2.44
1458 1629 0.253044 CTCTGGGAGAATCGGCCAAA 59.747 55.000 2.24 0.00 34.37 3.28
1459 1630 0.909610 ACTCTGGGAGAATCGGCCAA 60.910 55.000 2.24 0.00 34.37 4.52
1460 1631 1.306141 ACTCTGGGAGAATCGGCCA 60.306 57.895 2.24 0.00 34.37 5.36
1461 1632 1.045911 AGACTCTGGGAGAATCGGCC 61.046 60.000 0.00 0.00 34.37 6.13
1462 1633 0.827368 AAGACTCTGGGAGAATCGGC 59.173 55.000 1.31 0.00 34.37 5.54
1463 1634 2.100584 CTCAAGACTCTGGGAGAATCGG 59.899 54.545 1.31 0.00 34.37 4.18
1464 1635 3.020274 TCTCAAGACTCTGGGAGAATCG 58.980 50.000 7.81 0.00 33.73 3.34
1467 1638 3.445450 CGATTCTCAAGACTCTGGGAGAA 59.555 47.826 18.68 18.68 46.74 2.87
1468 1639 3.020274 CGATTCTCAAGACTCTGGGAGA 58.980 50.000 6.60 6.60 34.77 3.71
1469 1640 3.020274 TCGATTCTCAAGACTCTGGGAG 58.980 50.000 2.79 2.79 35.52 4.30
1470 1641 2.755655 GTCGATTCTCAAGACTCTGGGA 59.244 50.000 0.00 0.00 32.58 4.37
1471 1642 2.159170 GGTCGATTCTCAAGACTCTGGG 60.159 54.545 0.00 0.00 35.42 4.45
1472 1643 2.159170 GGGTCGATTCTCAAGACTCTGG 60.159 54.545 0.00 0.00 32.91 3.86
1473 1644 2.757868 AGGGTCGATTCTCAAGACTCTG 59.242 50.000 0.00 0.00 43.39 3.35
1474 1645 3.094484 AGGGTCGATTCTCAAGACTCT 57.906 47.619 0.00 0.00 40.56 3.24
1475 1646 3.193691 TGAAGGGTCGATTCTCAAGACTC 59.806 47.826 0.00 0.00 35.72 3.36
1476 1647 3.165875 TGAAGGGTCGATTCTCAAGACT 58.834 45.455 0.00 0.00 35.42 3.24
1477 1648 3.594603 TGAAGGGTCGATTCTCAAGAC 57.405 47.619 0.00 0.00 0.00 3.01
1478 1649 3.133003 GGATGAAGGGTCGATTCTCAAGA 59.867 47.826 0.00 0.00 0.00 3.02
1479 1650 3.118629 TGGATGAAGGGTCGATTCTCAAG 60.119 47.826 0.00 0.00 0.00 3.02
1480 1651 2.837591 TGGATGAAGGGTCGATTCTCAA 59.162 45.455 0.00 0.00 0.00 3.02
1481 1652 2.432146 CTGGATGAAGGGTCGATTCTCA 59.568 50.000 0.00 0.00 0.00 3.27
1482 1653 2.804933 GCTGGATGAAGGGTCGATTCTC 60.805 54.545 0.00 0.00 0.00 2.87
1483 1654 1.139853 GCTGGATGAAGGGTCGATTCT 59.860 52.381 0.00 0.00 0.00 2.40
1484 1655 1.139853 AGCTGGATGAAGGGTCGATTC 59.860 52.381 0.00 0.00 0.00 2.52
1485 1656 1.207791 AGCTGGATGAAGGGTCGATT 58.792 50.000 0.00 0.00 0.00 3.34
1486 1657 1.207791 AAGCTGGATGAAGGGTCGAT 58.792 50.000 0.00 0.00 0.00 3.59
1487 1658 0.984230 AAAGCTGGATGAAGGGTCGA 59.016 50.000 0.00 0.00 0.00 4.20
1488 1659 1.740025 GAAAAGCTGGATGAAGGGTCG 59.260 52.381 0.00 0.00 0.00 4.79
1489 1660 2.095461 GGAAAAGCTGGATGAAGGGTC 58.905 52.381 0.00 0.00 0.00 4.46
1490 1661 1.713078 AGGAAAAGCTGGATGAAGGGT 59.287 47.619 0.00 0.00 0.00 4.34
1491 1662 2.521547 AGGAAAAGCTGGATGAAGGG 57.478 50.000 0.00 0.00 0.00 3.95
1492 1663 4.494091 TCTAGGAAAAGCTGGATGAAGG 57.506 45.455 0.00 0.00 0.00 3.46
1493 1664 6.355747 AGATTCTAGGAAAAGCTGGATGAAG 58.644 40.000 0.00 0.00 0.00 3.02
1494 1665 6.319048 AGATTCTAGGAAAAGCTGGATGAA 57.681 37.500 0.00 0.00 0.00 2.57
1495 1666 5.965033 AGATTCTAGGAAAAGCTGGATGA 57.035 39.130 0.00 0.00 0.00 2.92
1496 1667 5.884792 ACAAGATTCTAGGAAAAGCTGGATG 59.115 40.000 0.00 0.00 0.00 3.51
1497 1668 6.072199 ACAAGATTCTAGGAAAAGCTGGAT 57.928 37.500 0.00 0.00 0.00 3.41
1498 1669 5.505181 ACAAGATTCTAGGAAAAGCTGGA 57.495 39.130 0.00 0.00 0.00 3.86
1499 1670 5.586643 GGTACAAGATTCTAGGAAAAGCTGG 59.413 44.000 0.00 0.00 0.00 4.85
1500 1671 5.586643 GGGTACAAGATTCTAGGAAAAGCTG 59.413 44.000 0.00 0.00 0.00 4.24
1501 1672 5.250774 TGGGTACAAGATTCTAGGAAAAGCT 59.749 40.000 0.00 0.00 0.00 3.74
1502 1673 5.497474 TGGGTACAAGATTCTAGGAAAAGC 58.503 41.667 0.00 0.00 0.00 3.51
1503 1674 9.853177 AATATGGGTACAAGATTCTAGGAAAAG 57.147 33.333 0.00 0.00 0.00 2.27
1530 1701 4.735369 TCTTCAGGCCCAGATTGTAAAAA 58.265 39.130 0.00 0.00 0.00 1.94
1531 1702 4.380843 TCTTCAGGCCCAGATTGTAAAA 57.619 40.909 0.00 0.00 0.00 1.52
1532 1703 4.018506 TCATCTTCAGGCCCAGATTGTAAA 60.019 41.667 0.00 0.00 0.00 2.01
1533 1704 3.523157 TCATCTTCAGGCCCAGATTGTAA 59.477 43.478 0.00 0.00 0.00 2.41
1534 1705 3.114606 TCATCTTCAGGCCCAGATTGTA 58.885 45.455 0.00 0.00 0.00 2.41
1535 1706 1.918262 TCATCTTCAGGCCCAGATTGT 59.082 47.619 0.00 0.00 0.00 2.71
1536 1707 2.723322 TCATCTTCAGGCCCAGATTG 57.277 50.000 0.00 0.00 0.00 2.67
1537 1708 2.752154 GCATCATCTTCAGGCCCAGATT 60.752 50.000 0.00 0.00 0.00 2.40
1538 1709 1.202903 GCATCATCTTCAGGCCCAGAT 60.203 52.381 0.00 0.74 0.00 2.90
1539 1710 0.182061 GCATCATCTTCAGGCCCAGA 59.818 55.000 0.00 0.00 0.00 3.86
1540 1711 0.106868 TGCATCATCTTCAGGCCCAG 60.107 55.000 0.00 0.00 0.00 4.45
1541 1712 0.106868 CTGCATCATCTTCAGGCCCA 60.107 55.000 0.00 0.00 0.00 5.36
1542 1713 0.106819 ACTGCATCATCTTCAGGCCC 60.107 55.000 0.00 0.00 32.42 5.80
1543 1714 1.022735 CACTGCATCATCTTCAGGCC 58.977 55.000 0.00 0.00 32.42 5.19
1544 1715 1.022735 CCACTGCATCATCTTCAGGC 58.977 55.000 0.00 0.00 32.42 4.85
1545 1716 1.022735 GCCACTGCATCATCTTCAGG 58.977 55.000 0.00 0.00 37.47 3.86
1559 1730 0.250467 CTACACCACAGCTTGCCACT 60.250 55.000 0.00 0.00 0.00 4.00
1568 1739 0.956902 TGCATGCTGCTACACCACAG 60.957 55.000 20.33 0.00 45.31 3.66
1592 1763 4.505191 CCACGTTGTCTAGAGAAAAACGAA 59.495 41.667 24.91 0.00 43.34 3.85
1608 1779 2.012937 TAATTAGGCGGTCCACGTTG 57.987 50.000 0.00 0.00 46.52 4.10
1616 1787 2.271944 GCCTGGATTAATTAGGCGGT 57.728 50.000 21.63 0.00 46.47 5.68
1633 1852 0.255890 TGCTCCAGGAACTAATGGCC 59.744 55.000 0.00 0.00 36.02 5.36
1644 1863 2.044650 CCACCCATGTGCTCCAGG 60.045 66.667 0.00 0.00 41.35 4.45
1661 1880 3.683937 GCACATGCACCACACCCC 61.684 66.667 0.00 0.00 41.59 4.95
1665 1884 1.227793 TCGAAGCACATGCACCACA 60.228 52.632 6.64 0.00 45.16 4.17
1666 1885 1.230635 ACTCGAAGCACATGCACCAC 61.231 55.000 6.64 0.00 45.16 4.16
1667 1886 1.071299 ACTCGAAGCACATGCACCA 59.929 52.632 6.64 0.00 45.16 4.17
1668 1887 1.230635 ACACTCGAAGCACATGCACC 61.231 55.000 6.64 0.00 45.16 5.01
1672 1988 1.788258 AGACACACTCGAAGCACATG 58.212 50.000 0.00 0.00 0.00 3.21
1680 1996 1.819288 GGAGGATGAAGACACACTCGA 59.181 52.381 0.00 0.00 34.84 4.04
1682 1998 3.096092 AGAGGAGGATGAAGACACACTC 58.904 50.000 0.00 0.00 33.93 3.51
1704 2020 4.595350 AGGAGACATAAATCTTAGGAGGGC 59.405 45.833 0.00 0.00 0.00 5.19
1728 2048 4.385825 AGGACAAAAACGATGAGCACTTA 58.614 39.130 0.00 0.00 0.00 2.24
1746 2066 2.222227 AAGCATTGAAGGGGAAGGAC 57.778 50.000 0.00 0.00 0.00 3.85
1791 2111 3.905678 CGCCTTCGATCTCCCGCT 61.906 66.667 0.00 0.00 38.10 5.52
1854 2174 4.373116 TGTCCTCTTCGTGGCCGC 62.373 66.667 6.11 6.11 0.00 6.53
1855 2175 2.432628 GTGTCCTCTTCGTGGCCG 60.433 66.667 0.00 0.00 0.00 6.13
1856 2176 2.047179 GGTGTCCTCTTCGTGGCC 60.047 66.667 0.00 0.00 0.00 5.36
1857 2177 2.227089 ATCGGTGTCCTCTTCGTGGC 62.227 60.000 0.00 0.00 0.00 5.01
1861 2181 1.350193 CACAATCGGTGTCCTCTTCG 58.650 55.000 0.00 0.00 42.75 3.79
1920 2244 1.767681 GATGAGAGGATTCCAGCACCT 59.232 52.381 5.29 0.00 36.68 4.00
2079 2675 1.761822 GGGGGTGCCCTATAGCTTC 59.238 63.158 7.26 0.00 44.66 3.86
2172 2768 6.710744 GGAGGATCTGTTCAAGTTAAAAGTGA 59.289 38.462 0.00 0.00 33.73 3.41
2328 2931 1.374343 TACTCGCCAGTACCTGCTCG 61.374 60.000 3.10 0.00 33.62 5.03
2348 2951 2.745884 CGTGGGCGATCAAAGGCA 60.746 61.111 0.00 0.00 41.33 4.75
2530 3148 0.528249 GCAGCCACACACCAAAACAG 60.528 55.000 0.00 0.00 0.00 3.16
2764 3384 1.377987 GTGTGTGTGTGGTGGTGGT 60.378 57.895 0.00 0.00 0.00 4.16
2765 3385 1.377856 TGTGTGTGTGTGGTGGTGG 60.378 57.895 0.00 0.00 0.00 4.61
2766 3386 0.957888 TGTGTGTGTGTGTGGTGGTG 60.958 55.000 0.00 0.00 0.00 4.17
2767 3387 0.034574 ATGTGTGTGTGTGTGGTGGT 60.035 50.000 0.00 0.00 0.00 4.16
2768 3388 1.102154 AATGTGTGTGTGTGTGGTGG 58.898 50.000 0.00 0.00 0.00 4.61
2769 3389 2.937469 AAATGTGTGTGTGTGTGGTG 57.063 45.000 0.00 0.00 0.00 4.17
2770 3390 3.509575 AGAAAAATGTGTGTGTGTGTGGT 59.490 39.130 0.00 0.00 0.00 4.16
2771 3391 4.104776 GAGAAAAATGTGTGTGTGTGTGG 58.895 43.478 0.00 0.00 0.00 4.17
2772 3392 4.985413 AGAGAAAAATGTGTGTGTGTGTG 58.015 39.130 0.00 0.00 0.00 3.82
2773 3393 5.643379 AAGAGAAAAATGTGTGTGTGTGT 57.357 34.783 0.00 0.00 0.00 3.72
2774 3394 8.533965 CATTAAAGAGAAAAATGTGTGTGTGTG 58.466 33.333 0.00 0.00 0.00 3.82
2775 3395 7.222611 GCATTAAAGAGAAAAATGTGTGTGTGT 59.777 33.333 0.00 0.00 33.96 3.72
2776 3396 7.306749 GGCATTAAAGAGAAAAATGTGTGTGTG 60.307 37.037 0.00 0.00 33.96 3.82
2777 3397 6.701400 GGCATTAAAGAGAAAAATGTGTGTGT 59.299 34.615 0.00 0.00 33.96 3.72
2778 3398 6.925165 AGGCATTAAAGAGAAAAATGTGTGTG 59.075 34.615 0.00 0.00 33.96 3.82
2779 3399 6.925165 CAGGCATTAAAGAGAAAAATGTGTGT 59.075 34.615 0.00 0.00 33.96 3.72
2780 3400 6.128742 GCAGGCATTAAAGAGAAAAATGTGTG 60.129 38.462 0.00 0.00 33.96 3.82
2781 3401 5.928264 GCAGGCATTAAAGAGAAAAATGTGT 59.072 36.000 0.00 0.00 33.96 3.72
2975 3595 1.103398 GCACCGGCAATAGGAGCAAT 61.103 55.000 0.00 0.00 43.37 3.56
3137 3757 5.627780 CCAGAAAACTTAACCAAATACGCAC 59.372 40.000 0.00 0.00 0.00 5.34
3305 3932 7.074502 GCACACACACTTTTCAAAATTCAAAA 58.925 30.769 0.00 0.00 0.00 2.44
3306 3933 6.348050 GGCACACACACTTTTCAAAATTCAAA 60.348 34.615 0.00 0.00 0.00 2.69
3589 4216 4.780815 TCAAGGTGAGTGCATAATTAGGG 58.219 43.478 0.00 0.00 0.00 3.53
3984 4612 3.736759 GGTTCAAGTGAGTCGAAAGAGAC 59.263 47.826 0.00 0.00 43.49 3.36
4197 4825 7.849804 AGGTCATGCAAATAAGTACTAACAG 57.150 36.000 0.00 0.00 0.00 3.16
4489 5120 7.477494 TCGTATAGATCATTGAAGACGACAAA 58.523 34.615 3.33 0.00 33.54 2.83
4491 5122 6.613755 TCGTATAGATCATTGAAGACGACA 57.386 37.500 3.33 0.00 33.54 4.35
4667 5298 2.289072 GCTTCTTTCCCTTTCCTTTGGC 60.289 50.000 0.00 0.00 0.00 4.52
4756 5387 5.131784 TCATGCATACATATGAGCAAACCA 58.868 37.500 19.99 5.79 40.76 3.67
4919 5550 3.241530 AGAACCAGCAGCGGTCCA 61.242 61.111 9.04 0.00 38.76 4.02
5432 6063 2.894763 ATGTTTGCACAGCACAACAT 57.105 40.000 18.09 18.09 40.99 2.71
5561 6194 4.861102 AAAAGAAACAGGGCAATCTGAG 57.139 40.909 7.75 0.00 38.11 3.35
5571 6204 6.074356 CCGCAGACAAAATAAAAAGAAACAGG 60.074 38.462 0.00 0.00 0.00 4.00
5587 6220 4.323477 CCCCGAACCCGCAGACAA 62.323 66.667 0.00 0.00 0.00 3.18
5744 6377 9.621239 AGAATGGAGGGAGTAATTCTTATGATA 57.379 33.333 0.00 0.00 36.24 2.15
5745 6378 8.517323 AGAATGGAGGGAGTAATTCTTATGAT 57.483 34.615 0.00 0.00 36.24 2.45
5746 6379 7.937700 AGAATGGAGGGAGTAATTCTTATGA 57.062 36.000 0.00 0.00 36.24 2.15
5747 6380 8.986929 AAAGAATGGAGGGAGTAATTCTTATG 57.013 34.615 9.26 0.00 44.55 1.90
5756 6389 9.684702 ACCTTATATAAAAGAATGGAGGGAGTA 57.315 33.333 0.00 0.00 0.00 2.59
5757 6390 8.440771 CACCTTATATAAAAGAATGGAGGGAGT 58.559 37.037 0.00 0.00 0.00 3.85
5758 6391 8.440771 ACACCTTATATAAAAGAATGGAGGGAG 58.559 37.037 0.00 0.00 0.00 4.30
5759 6392 8.344939 ACACCTTATATAAAAGAATGGAGGGA 57.655 34.615 0.00 0.00 0.00 4.20
5793 6426 9.659830 GAACATGTACTCGTTTGACTTTTAAAT 57.340 29.630 0.00 0.00 0.00 1.40
5794 6427 7.847078 CGAACATGTACTCGTTTGACTTTTAAA 59.153 33.333 11.03 0.00 0.00 1.52
5795 6428 7.222417 TCGAACATGTACTCGTTTGACTTTTAA 59.778 33.333 17.09 0.00 36.46 1.52
5796 6429 6.696583 TCGAACATGTACTCGTTTGACTTTTA 59.303 34.615 17.09 0.00 36.46 1.52
5797 6430 5.521010 TCGAACATGTACTCGTTTGACTTTT 59.479 36.000 17.09 0.00 36.46 2.27
5798 6431 5.045215 TCGAACATGTACTCGTTTGACTTT 58.955 37.500 17.09 0.00 36.46 2.66
5799 6432 4.613944 TCGAACATGTACTCGTTTGACTT 58.386 39.130 17.09 0.00 36.46 3.01
5800 6433 4.233123 TCGAACATGTACTCGTTTGACT 57.767 40.909 17.09 0.00 36.46 3.41
5801 6434 4.619760 TGATCGAACATGTACTCGTTTGAC 59.380 41.667 17.09 11.83 38.13 3.18
5802 6435 4.800784 TGATCGAACATGTACTCGTTTGA 58.199 39.130 17.09 15.78 39.30 2.69
5803 6436 5.118664 ACTTGATCGAACATGTACTCGTTTG 59.881 40.000 17.09 8.24 36.46 2.93
5804 6437 5.227908 ACTTGATCGAACATGTACTCGTTT 58.772 37.500 17.09 8.32 36.46 3.60
5805 6438 4.806330 ACTTGATCGAACATGTACTCGTT 58.194 39.130 17.09 10.63 36.46 3.85
5806 6439 4.436242 ACTTGATCGAACATGTACTCGT 57.564 40.909 17.09 7.13 36.46 4.18
5807 6440 5.763444 AAACTTGATCGAACATGTACTCG 57.237 39.130 13.40 12.69 36.39 4.18
5808 6441 8.922676 TCTAAAAACTTGATCGAACATGTACTC 58.077 33.333 13.40 0.00 0.00 2.59
5809 6442 8.827177 TCTAAAAACTTGATCGAACATGTACT 57.173 30.769 13.40 3.34 0.00 2.73
5810 6443 9.872757 TTTCTAAAAACTTGATCGAACATGTAC 57.127 29.630 13.40 0.00 0.00 2.90
5812 6445 9.796120 TTTTTCTAAAAACTTGATCGAACATGT 57.204 25.926 8.19 8.19 33.29 3.21
5902 6535 9.764363 CAACATCTGCAATACCTAGTAGATAAA 57.236 33.333 0.00 0.00 35.44 1.40
5903 6536 8.924303 ACAACATCTGCAATACCTAGTAGATAA 58.076 33.333 0.00 0.00 35.44 1.75
5904 6537 8.478775 ACAACATCTGCAATACCTAGTAGATA 57.521 34.615 0.00 0.00 35.44 1.98
5905 6538 7.366847 ACAACATCTGCAATACCTAGTAGAT 57.633 36.000 0.00 0.00 37.63 1.98
5906 6539 6.791867 ACAACATCTGCAATACCTAGTAGA 57.208 37.500 0.00 0.00 0.00 2.59
5907 6540 9.547753 AATAACAACATCTGCAATACCTAGTAG 57.452 33.333 0.00 0.00 0.00 2.57
5908 6541 9.899661 AAATAACAACATCTGCAATACCTAGTA 57.100 29.630 0.00 0.00 0.00 1.82
5909 6542 8.807948 AAATAACAACATCTGCAATACCTAGT 57.192 30.769 0.00 0.00 0.00 2.57
5944 6577 9.829507 TCAATCATTTTAAAGTTTGACCAATGT 57.170 25.926 0.00 0.00 0.00 2.71
5947 6580 9.883142 AAGTCAATCATTTTAAAGTTTGACCAA 57.117 25.926 17.73 0.00 41.74 3.67
5948 6581 9.311916 CAAGTCAATCATTTTAAAGTTTGACCA 57.688 29.630 17.73 0.00 41.74 4.02
5949 6582 8.275632 GCAAGTCAATCATTTTAAAGTTTGACC 58.724 33.333 17.73 6.20 41.74 4.02
5950 6583 8.816144 TGCAAGTCAATCATTTTAAAGTTTGAC 58.184 29.630 15.30 15.30 41.40 3.18
5951 6584 8.939201 TGCAAGTCAATCATTTTAAAGTTTGA 57.061 26.923 0.00 0.00 0.00 2.69
5952 6585 9.588774 CATGCAAGTCAATCATTTTAAAGTTTG 57.411 29.630 0.00 0.00 0.00 2.93
5953 6586 9.545105 TCATGCAAGTCAATCATTTTAAAGTTT 57.455 25.926 0.00 0.00 0.00 2.66
5954 6587 9.545105 TTCATGCAAGTCAATCATTTTAAAGTT 57.455 25.926 0.00 0.00 0.00 2.66
5955 6588 9.545105 TTTCATGCAAGTCAATCATTTTAAAGT 57.455 25.926 0.00 0.00 0.00 2.66
5958 6591 8.772705 GGTTTTCATGCAAGTCAATCATTTTAA 58.227 29.630 0.00 0.00 0.00 1.52
5959 6592 7.930325 TGGTTTTCATGCAAGTCAATCATTTTA 59.070 29.630 0.00 0.00 0.00 1.52
5960 6593 6.766944 TGGTTTTCATGCAAGTCAATCATTTT 59.233 30.769 0.00 0.00 0.00 1.82
5961 6594 6.289834 TGGTTTTCATGCAAGTCAATCATTT 58.710 32.000 0.00 0.00 0.00 2.32
5962 6595 5.856156 TGGTTTTCATGCAAGTCAATCATT 58.144 33.333 0.00 0.00 0.00 2.57
5963 6596 5.471556 TGGTTTTCATGCAAGTCAATCAT 57.528 34.783 0.00 0.00 0.00 2.45
5964 6597 4.933505 TGGTTTTCATGCAAGTCAATCA 57.066 36.364 0.00 0.00 0.00 2.57
5965 6598 6.867816 TGTATTGGTTTTCATGCAAGTCAATC 59.132 34.615 9.74 5.43 0.00 2.67
5966 6599 6.646240 GTGTATTGGTTTTCATGCAAGTCAAT 59.354 34.615 0.00 10.72 0.00 2.57
5967 6600 5.982516 GTGTATTGGTTTTCATGCAAGTCAA 59.017 36.000 0.00 0.00 0.00 3.18
5968 6601 5.508825 GGTGTATTGGTTTTCATGCAAGTCA 60.509 40.000 0.00 0.00 0.00 3.41
5969 6602 4.923281 GGTGTATTGGTTTTCATGCAAGTC 59.077 41.667 0.00 0.00 0.00 3.01
5970 6603 4.588528 AGGTGTATTGGTTTTCATGCAAGT 59.411 37.500 0.00 0.00 0.00 3.16
5971 6604 5.138125 AGGTGTATTGGTTTTCATGCAAG 57.862 39.130 0.00 0.00 0.00 4.01
5972 6605 5.543507 AAGGTGTATTGGTTTTCATGCAA 57.456 34.783 0.00 0.00 0.00 4.08
5973 6606 6.849085 ATAAGGTGTATTGGTTTTCATGCA 57.151 33.333 0.00 0.00 0.00 3.96
5974 6607 9.463443 GAATATAAGGTGTATTGGTTTTCATGC 57.537 33.333 0.00 0.00 0.00 4.06
5977 6610 9.184523 CCAGAATATAAGGTGTATTGGTTTTCA 57.815 33.333 0.00 0.00 0.00 2.69
5978 6611 9.403583 TCCAGAATATAAGGTGTATTGGTTTTC 57.596 33.333 0.00 0.00 0.00 2.29
5979 6612 9.762381 TTCCAGAATATAAGGTGTATTGGTTTT 57.238 29.630 0.00 0.00 0.00 2.43
5980 6613 9.185680 GTTCCAGAATATAAGGTGTATTGGTTT 57.814 33.333 0.00 0.00 0.00 3.27
5981 6614 8.333235 TGTTCCAGAATATAAGGTGTATTGGTT 58.667 33.333 0.00 0.00 0.00 3.67
5982 6615 7.867921 TGTTCCAGAATATAAGGTGTATTGGT 58.132 34.615 0.00 0.00 0.00 3.67
5983 6616 8.210946 TCTGTTCCAGAATATAAGGTGTATTGG 58.789 37.037 0.00 0.00 37.57 3.16
5984 6617 9.265901 CTCTGTTCCAGAATATAAGGTGTATTG 57.734 37.037 0.00 0.00 40.18 1.90
5985 6618 9.213777 TCTCTGTTCCAGAATATAAGGTGTATT 57.786 33.333 0.00 0.00 40.18 1.89
5986 6619 8.783660 TCTCTGTTCCAGAATATAAGGTGTAT 57.216 34.615 0.00 0.00 40.18 2.29
5987 6620 8.059461 TCTCTCTGTTCCAGAATATAAGGTGTA 58.941 37.037 0.00 0.00 40.18 2.90
5988 6621 6.897966 TCTCTCTGTTCCAGAATATAAGGTGT 59.102 38.462 0.00 0.00 40.18 4.16
5989 6622 7.069331 ACTCTCTCTGTTCCAGAATATAAGGTG 59.931 40.741 0.00 0.00 40.18 4.00
5990 6623 7.129425 ACTCTCTCTGTTCCAGAATATAAGGT 58.871 38.462 0.00 0.00 40.18 3.50
5991 6624 7.595819 ACTCTCTCTGTTCCAGAATATAAGG 57.404 40.000 0.00 0.00 40.18 2.69
5997 6630 9.647918 TGTATTATACTCTCTCTGTTCCAGAAT 57.352 33.333 3.92 0.00 40.18 2.40
5998 6631 9.475620 TTGTATTATACTCTCTCTGTTCCAGAA 57.524 33.333 3.92 0.00 40.18 3.02
5999 6632 9.126151 CTTGTATTATACTCTCTCTGTTCCAGA 57.874 37.037 3.92 0.00 38.25 3.86
6000 6633 9.126151 TCTTGTATTATACTCTCTCTGTTCCAG 57.874 37.037 3.92 0.00 0.00 3.86
6001 6634 8.904834 GTCTTGTATTATACTCTCTCTGTTCCA 58.095 37.037 3.92 0.00 0.00 3.53
6002 6635 8.354426 GGTCTTGTATTATACTCTCTCTGTTCC 58.646 40.741 3.92 0.00 0.00 3.62
6003 6636 8.071368 CGGTCTTGTATTATACTCTCTCTGTTC 58.929 40.741 3.92 0.00 0.00 3.18
6004 6637 7.556996 ACGGTCTTGTATTATACTCTCTCTGTT 59.443 37.037 3.92 0.00 0.00 3.16
6005 6638 7.055378 ACGGTCTTGTATTATACTCTCTCTGT 58.945 38.462 3.92 0.48 0.00 3.41
6006 6639 7.499321 ACGGTCTTGTATTATACTCTCTCTG 57.501 40.000 3.92 0.00 0.00 3.35
6007 6640 8.522542 AAACGGTCTTGTATTATACTCTCTCT 57.477 34.615 3.92 0.00 0.00 3.10
6008 6641 8.623030 AGAAACGGTCTTGTATTATACTCTCTC 58.377 37.037 3.92 0.00 29.66 3.20
6009 6642 8.522542 AGAAACGGTCTTGTATTATACTCTCT 57.477 34.615 3.92 0.00 29.66 3.10
6010 6643 9.583765 AAAGAAACGGTCTTGTATTATACTCTC 57.416 33.333 3.92 0.00 46.36 3.20
6011 6644 9.939802 AAAAGAAACGGTCTTGTATTATACTCT 57.060 29.630 3.92 0.00 46.36 3.24
6016 6649 9.063615 AGACAAAAAGAAACGGTCTTGTATTAT 57.936 29.630 4.58 0.00 46.36 1.28
6017 6650 8.339714 CAGACAAAAAGAAACGGTCTTGTATTA 58.660 33.333 4.58 0.00 46.36 0.98
6018 6651 7.193595 CAGACAAAAAGAAACGGTCTTGTATT 58.806 34.615 4.58 0.00 46.36 1.89
6019 6652 6.725246 CAGACAAAAAGAAACGGTCTTGTAT 58.275 36.000 4.58 0.00 46.36 2.29
6020 6653 5.448089 GCAGACAAAAAGAAACGGTCTTGTA 60.448 40.000 4.58 0.00 46.36 2.41
6021 6654 4.674362 GCAGACAAAAAGAAACGGTCTTGT 60.674 41.667 4.58 0.18 46.36 3.16
6022 6655 3.791353 GCAGACAAAAAGAAACGGTCTTG 59.209 43.478 4.58 0.00 46.36 3.02
6024 6657 3.013921 TGCAGACAAAAAGAAACGGTCT 58.986 40.909 0.00 0.00 39.27 3.85
6025 6658 3.414549 TGCAGACAAAAAGAAACGGTC 57.585 42.857 0.00 0.00 0.00 4.79
6026 6659 5.705609 ATATGCAGACAAAAAGAAACGGT 57.294 34.783 0.00 0.00 0.00 4.83
6027 6660 7.526608 TCTTATATGCAGACAAAAAGAAACGG 58.473 34.615 0.00 0.00 0.00 4.44
6028 6661 9.559958 AATCTTATATGCAGACAAAAAGAAACG 57.440 29.630 0.00 0.00 30.46 3.60
6038 6671 9.399797 ACTTTGATCAAATCTTATATGCAGACA 57.600 29.630 20.76 0.00 0.00 3.41
6039 6672 9.875675 GACTTTGATCAAATCTTATATGCAGAC 57.124 33.333 20.76 2.27 0.00 3.51
6040 6673 9.617523 TGACTTTGATCAAATCTTATATGCAGA 57.382 29.630 20.76 0.00 0.00 4.26
6050 6683 9.874205 TCAAAAAGTTTGACTTTGATCAAATCT 57.126 25.926 20.76 9.49 46.78 2.40
6053 6686 9.487790 AGTTCAAAAAGTTTGACTTTGATCAAA 57.512 25.926 19.45 19.45 46.78 2.69
6054 6687 9.487790 AAGTTCAAAAAGTTTGACTTTGATCAA 57.512 25.926 3.38 3.38 46.78 2.57
6055 6688 9.487790 AAAGTTCAAAAAGTTTGACTTTGATCA 57.512 25.926 19.15 0.00 46.78 2.92
6226 6859 9.076596 GCATATTAGATTTGGTCAAAGTCAAAC 57.923 33.333 2.55 0.00 35.97 2.93
6227 6860 8.801299 TGCATATTAGATTTGGTCAAAGTCAAA 58.199 29.630 2.55 0.00 37.29 2.69
6228 6861 8.347004 TGCATATTAGATTTGGTCAAAGTCAA 57.653 30.769 2.55 0.00 33.32 3.18
6229 6862 7.828717 TCTGCATATTAGATTTGGTCAAAGTCA 59.171 33.333 2.55 0.00 33.32 3.41
6230 6863 8.125448 GTCTGCATATTAGATTTGGTCAAAGTC 58.875 37.037 2.55 1.51 33.32 3.01
6231 6864 7.831193 AGTCTGCATATTAGATTTGGTCAAAGT 59.169 33.333 2.55 0.00 33.32 2.66
6232 6865 8.218338 AGTCTGCATATTAGATTTGGTCAAAG 57.782 34.615 2.55 0.00 33.32 2.77
6233 6866 9.679661 TTAGTCTGCATATTAGATTTGGTCAAA 57.320 29.630 0.00 0.00 34.46 2.69
6234 6867 9.679661 TTTAGTCTGCATATTAGATTTGGTCAA 57.320 29.630 0.00 0.00 0.00 3.18
6235 6868 9.679661 TTTTAGTCTGCATATTAGATTTGGTCA 57.320 29.630 0.00 0.00 0.00 4.02
6243 6876 8.879759 CCGTTTCTTTTTAGTCTGCATATTAGA 58.120 33.333 0.00 0.00 0.00 2.10
6244 6877 8.879759 TCCGTTTCTTTTTAGTCTGCATATTAG 58.120 33.333 0.00 0.00 0.00 1.73
6245 6878 8.780846 TCCGTTTCTTTTTAGTCTGCATATTA 57.219 30.769 0.00 0.00 0.00 0.98
6246 6879 7.148239 CCTCCGTTTCTTTTTAGTCTGCATATT 60.148 37.037 0.00 0.00 0.00 1.28
6247 6880 6.316390 CCTCCGTTTCTTTTTAGTCTGCATAT 59.684 38.462 0.00 0.00 0.00 1.78
6248 6881 5.642063 CCTCCGTTTCTTTTTAGTCTGCATA 59.358 40.000 0.00 0.00 0.00 3.14
6249 6882 4.455877 CCTCCGTTTCTTTTTAGTCTGCAT 59.544 41.667 0.00 0.00 0.00 3.96
6250 6883 3.813166 CCTCCGTTTCTTTTTAGTCTGCA 59.187 43.478 0.00 0.00 0.00 4.41
6251 6884 3.188667 CCCTCCGTTTCTTTTTAGTCTGC 59.811 47.826 0.00 0.00 0.00 4.26
6252 6885 4.638304 TCCCTCCGTTTCTTTTTAGTCTG 58.362 43.478 0.00 0.00 0.00 3.51
6253 6886 4.347292 ACTCCCTCCGTTTCTTTTTAGTCT 59.653 41.667 0.00 0.00 0.00 3.24
6254 6887 4.639334 ACTCCCTCCGTTTCTTTTTAGTC 58.361 43.478 0.00 0.00 0.00 2.59
6255 6888 4.701651 ACTCCCTCCGTTTCTTTTTAGT 57.298 40.909 0.00 0.00 0.00 2.24
6256 6889 6.034161 TCTACTCCCTCCGTTTCTTTTTAG 57.966 41.667 0.00 0.00 0.00 1.85
6257 6890 6.183360 TGTTCTACTCCCTCCGTTTCTTTTTA 60.183 38.462 0.00 0.00 0.00 1.52
6258 6891 4.968971 TCTACTCCCTCCGTTTCTTTTT 57.031 40.909 0.00 0.00 0.00 1.94
6259 6892 4.102054 TGTTCTACTCCCTCCGTTTCTTTT 59.898 41.667 0.00 0.00 0.00 2.27
6260 6893 3.644738 TGTTCTACTCCCTCCGTTTCTTT 59.355 43.478 0.00 0.00 0.00 2.52
6261 6894 3.006644 GTGTTCTACTCCCTCCGTTTCTT 59.993 47.826 0.00 0.00 0.00 2.52
6262 6895 2.561858 GTGTTCTACTCCCTCCGTTTCT 59.438 50.000 0.00 0.00 0.00 2.52
6263 6896 2.561858 AGTGTTCTACTCCCTCCGTTTC 59.438 50.000 0.00 0.00 33.17 2.78
6264 6897 2.606378 AGTGTTCTACTCCCTCCGTTT 58.394 47.619 0.00 0.00 33.17 3.60
6265 6898 2.305858 AGTGTTCTACTCCCTCCGTT 57.694 50.000 0.00 0.00 33.17 4.44
6266 6899 3.553904 GATAGTGTTCTACTCCCTCCGT 58.446 50.000 0.00 0.00 40.89 4.69
6267 6900 2.885894 GGATAGTGTTCTACTCCCTCCG 59.114 54.545 0.00 0.00 40.89 4.63
6268 6901 4.187506 AGGATAGTGTTCTACTCCCTCC 57.812 50.000 0.00 0.00 37.80 4.30
6269 6902 5.682730 GCAAAGGATAGTGTTCTACTCCCTC 60.683 48.000 0.00 0.00 39.96 4.30
6270 6903 4.162509 GCAAAGGATAGTGTTCTACTCCCT 59.837 45.833 0.00 0.00 41.56 4.20
6271 6904 4.081087 TGCAAAGGATAGTGTTCTACTCCC 60.081 45.833 0.00 0.00 40.89 4.30
6272 6905 4.870991 GTGCAAAGGATAGTGTTCTACTCC 59.129 45.833 0.00 0.00 40.89 3.85
6273 6906 5.479306 TGTGCAAAGGATAGTGTTCTACTC 58.521 41.667 0.00 0.00 40.89 2.59
6274 6907 5.483685 TGTGCAAAGGATAGTGTTCTACT 57.516 39.130 0.00 0.00 43.56 2.57
6275 6908 6.426937 TCTTTGTGCAAAGGATAGTGTTCTAC 59.573 38.462 20.39 0.00 45.80 2.59
6276 6909 6.530120 TCTTTGTGCAAAGGATAGTGTTCTA 58.470 36.000 20.39 0.00 45.80 2.10
6277 6910 5.376625 TCTTTGTGCAAAGGATAGTGTTCT 58.623 37.500 20.39 0.00 45.80 3.01
6278 6911 5.689383 TCTTTGTGCAAAGGATAGTGTTC 57.311 39.130 20.39 0.00 45.80 3.18
6279 6912 6.127479 TGTTTCTTTGTGCAAAGGATAGTGTT 60.127 34.615 20.39 0.00 45.80 3.32
6280 6913 5.359576 TGTTTCTTTGTGCAAAGGATAGTGT 59.640 36.000 20.39 0.00 45.80 3.55
6281 6914 5.830912 TGTTTCTTTGTGCAAAGGATAGTG 58.169 37.500 20.39 0.00 45.80 2.74
6282 6915 6.273071 GTTGTTTCTTTGTGCAAAGGATAGT 58.727 36.000 20.39 0.00 45.80 2.12
6283 6916 5.399301 CGTTGTTTCTTTGTGCAAAGGATAG 59.601 40.000 20.39 0.54 45.80 2.08
6284 6917 5.277825 CGTTGTTTCTTTGTGCAAAGGATA 58.722 37.500 20.39 8.72 45.80 2.59
6285 6918 4.111916 CGTTGTTTCTTTGTGCAAAGGAT 58.888 39.130 20.39 0.00 45.80 3.24
6286 6919 3.506810 CGTTGTTTCTTTGTGCAAAGGA 58.493 40.909 20.39 12.19 45.80 3.36
6287 6920 2.602660 CCGTTGTTTCTTTGTGCAAAGG 59.397 45.455 20.39 6.41 45.80 3.11
6288 6921 2.029124 GCCGTTGTTTCTTTGTGCAAAG 59.971 45.455 16.16 16.16 46.82 2.77
6289 6922 1.996191 GCCGTTGTTTCTTTGTGCAAA 59.004 42.857 0.00 0.00 0.00 3.68
6290 6923 1.634702 GCCGTTGTTTCTTTGTGCAA 58.365 45.000 0.00 0.00 0.00 4.08
6291 6924 0.179124 GGCCGTTGTTTCTTTGTGCA 60.179 50.000 0.00 0.00 0.00 4.57
6292 6925 0.179124 TGGCCGTTGTTTCTTTGTGC 60.179 50.000 0.00 0.00 0.00 4.57
6293 6926 2.159310 TCTTGGCCGTTGTTTCTTTGTG 60.159 45.455 0.00 0.00 0.00 3.33
6294 6927 2.096248 TCTTGGCCGTTGTTTCTTTGT 58.904 42.857 0.00 0.00 0.00 2.83
6295 6928 2.861462 TCTTGGCCGTTGTTTCTTTG 57.139 45.000 0.00 0.00 0.00 2.77
6296 6929 2.758423 ACTTCTTGGCCGTTGTTTCTTT 59.242 40.909 0.00 0.00 0.00 2.52
6297 6930 2.375146 ACTTCTTGGCCGTTGTTTCTT 58.625 42.857 0.00 0.00 0.00 2.52
6298 6931 2.052782 ACTTCTTGGCCGTTGTTTCT 57.947 45.000 0.00 0.00 0.00 2.52
6299 6932 3.974871 TTACTTCTTGGCCGTTGTTTC 57.025 42.857 0.00 0.00 0.00 2.78
6300 6933 4.722361 TTTTACTTCTTGGCCGTTGTTT 57.278 36.364 0.00 0.00 0.00 2.83
6301 6934 4.929819 ATTTTACTTCTTGGCCGTTGTT 57.070 36.364 0.00 0.00 0.00 2.83
6302 6935 4.929819 AATTTTACTTCTTGGCCGTTGT 57.070 36.364 0.00 0.00 0.00 3.32
6303 6936 5.764131 TGTAATTTTACTTCTTGGCCGTTG 58.236 37.500 0.00 0.00 34.77 4.10
6304 6937 6.394025 TTGTAATTTTACTTCTTGGCCGTT 57.606 33.333 0.00 0.00 34.77 4.44
6305 6938 6.183360 TGTTTGTAATTTTACTTCTTGGCCGT 60.183 34.615 0.00 0.00 34.77 5.68
6306 6939 6.210078 TGTTTGTAATTTTACTTCTTGGCCG 58.790 36.000 0.00 0.00 34.77 6.13
6307 6940 7.923878 TCTTGTTTGTAATTTTACTTCTTGGCC 59.076 33.333 0.00 0.00 34.77 5.36
6308 6941 8.752254 GTCTTGTTTGTAATTTTACTTCTTGGC 58.248 33.333 2.45 0.00 34.77 4.52
6309 6942 9.244799 GGTCTTGTTTGTAATTTTACTTCTTGG 57.755 33.333 2.45 0.00 34.77 3.61
6310 6943 9.796120 TGGTCTTGTTTGTAATTTTACTTCTTG 57.204 29.630 2.45 0.00 34.77 3.02
6350 6983 2.140717 ACGGACGTTGGAATCAAGTTC 58.859 47.619 0.00 0.00 32.92 3.01
6351 6984 2.140717 GACGGACGTTGGAATCAAGTT 58.859 47.619 0.00 0.00 32.92 2.66
6352 6985 1.069513 TGACGGACGTTGGAATCAAGT 59.930 47.619 0.00 0.00 32.92 3.16
6353 6986 1.459592 GTGACGGACGTTGGAATCAAG 59.540 52.381 0.00 0.00 32.92 3.02
6354 6987 1.504359 GTGACGGACGTTGGAATCAA 58.496 50.000 0.00 0.00 0.00 2.57
6355 6988 0.320073 GGTGACGGACGTTGGAATCA 60.320 55.000 0.00 0.00 0.00 2.57
6356 6989 0.037605 AGGTGACGGACGTTGGAATC 60.038 55.000 0.00 0.00 0.00 2.52
6357 6990 0.320421 CAGGTGACGGACGTTGGAAT 60.320 55.000 0.00 0.00 0.00 3.01
6358 6991 1.068417 CAGGTGACGGACGTTGGAA 59.932 57.895 0.00 0.00 0.00 3.53
6359 6992 2.732016 CAGGTGACGGACGTTGGA 59.268 61.111 0.00 0.00 0.00 3.53
6360 6993 3.041940 GCAGGTGACGGACGTTGG 61.042 66.667 0.00 0.00 0.00 3.77
6361 6994 3.041940 GGCAGGTGACGGACGTTG 61.042 66.667 0.00 0.00 0.00 4.10
6362 6995 3.222354 GAGGCAGGTGACGGACGTT 62.222 63.158 0.00 0.00 39.28 3.99
6363 6996 3.681835 GAGGCAGGTGACGGACGT 61.682 66.667 0.00 0.00 39.28 4.34
6364 6997 3.374402 AGAGGCAGGTGACGGACG 61.374 66.667 0.00 0.00 39.28 4.79
6365 6998 2.262915 CAGAGGCAGGTGACGGAC 59.737 66.667 0.00 0.00 0.00 4.79
6366 6999 2.997315 CCAGAGGCAGGTGACGGA 60.997 66.667 0.00 0.00 0.00 4.69
6381 7014 2.203337 GCTTCTGTGGTGGTGCCA 60.203 61.111 0.00 0.00 46.95 4.92
6382 7015 2.985847 GGCTTCTGTGGTGGTGCC 60.986 66.667 0.00 0.00 37.90 5.01
6383 7016 2.203337 TGGCTTCTGTGGTGGTGC 60.203 61.111 0.00 0.00 0.00 5.01
6384 7017 1.152984 TGTGGCTTCTGTGGTGGTG 60.153 57.895 0.00 0.00 0.00 4.17
6385 7018 1.149174 CTGTGGCTTCTGTGGTGGT 59.851 57.895 0.00 0.00 0.00 4.16
6386 7019 0.179020 TTCTGTGGCTTCTGTGGTGG 60.179 55.000 0.00 0.00 0.00 4.61
6387 7020 1.233019 CTTCTGTGGCTTCTGTGGTG 58.767 55.000 0.00 0.00 0.00 4.17
6388 7021 0.109342 CCTTCTGTGGCTTCTGTGGT 59.891 55.000 0.00 0.00 0.00 4.16
6389 7022 0.397941 TCCTTCTGTGGCTTCTGTGG 59.602 55.000 0.00 0.00 0.00 4.17
6390 7023 2.260844 TTCCTTCTGTGGCTTCTGTG 57.739 50.000 0.00 0.00 0.00 3.66
6391 7024 3.297134 TTTTCCTTCTGTGGCTTCTGT 57.703 42.857 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.