Multiple sequence alignment - TraesCS7A01G218900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G218900 chr7A 100.000 3170 0 0 1 3170 186098212 186095043 0.000000e+00 5854.0
1 TraesCS7A01G218900 chr7A 89.272 1566 105 38 908 2452 185975455 185976978 0.000000e+00 1903.0
2 TraesCS7A01G218900 chr7A 95.930 172 7 0 601 772 185975224 185975395 2.410000e-71 279.0
3 TraesCS7A01G218900 chr7D 94.541 2473 97 20 1 2465 184499382 184501824 0.000000e+00 3784.0
4 TraesCS7A01G218900 chr7D 89.208 2298 168 41 1 2269 184524848 184522602 0.000000e+00 2796.0
5 TraesCS7A01G218900 chr7D 79.615 260 21 11 2274 2504 184522632 184522376 1.180000e-34 158.0
6 TraesCS7A01G218900 chr7D 95.312 64 3 0 2468 2531 184505003 184505066 5.590000e-18 102.0
7 TraesCS7A01G218900 chr7B 89.065 2277 167 39 22 2269 153744610 153742387 0.000000e+00 2750.0
8 TraesCS7A01G218900 chr7B 88.786 1721 84 42 901 2534 153581853 153583551 0.000000e+00 2008.0
9 TraesCS7A01G218900 chr7B 92.643 802 43 9 1 797 153581051 153581841 0.000000e+00 1140.0
10 TraesCS7A01G218900 chr7B 74.701 1253 238 50 936 2155 133707833 133706627 4.750000e-133 484.0
11 TraesCS7A01G218900 chr6D 74.483 1258 248 49 952 2168 114224865 114226090 7.960000e-131 477.0
12 TraesCS7A01G218900 chr6A 74.252 1270 239 62 952 2168 142773005 142774239 1.340000e-123 453.0
13 TraesCS7A01G218900 chr6B 75.177 705 136 27 1485 2168 203894878 203895564 2.390000e-76 296.0
14 TraesCS7A01G218900 chr6B 83.951 81 7 4 822 901 9218454 9218379 4.390000e-09 73.1
15 TraesCS7A01G218900 chrUn 73.481 675 126 34 941 1590 91795825 91795179 4.140000e-49 206.0
16 TraesCS7A01G218900 chr4D 95.745 47 2 0 1938 1984 273914604 273914650 3.390000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G218900 chr7A 186095043 186098212 3169 True 5854 5854 100.0000 1 3170 1 chr7A.!!$R1 3169
1 TraesCS7A01G218900 chr7A 185975224 185976978 1754 False 1091 1903 92.6010 601 2452 2 chr7A.!!$F1 1851
2 TraesCS7A01G218900 chr7D 184499382 184505066 5684 False 1943 3784 94.9265 1 2531 2 chr7D.!!$F1 2530
3 TraesCS7A01G218900 chr7D 184522376 184524848 2472 True 1477 2796 84.4115 1 2504 2 chr7D.!!$R1 2503
4 TraesCS7A01G218900 chr7B 153742387 153744610 2223 True 2750 2750 89.0650 22 2269 1 chr7B.!!$R2 2247
5 TraesCS7A01G218900 chr7B 153581051 153583551 2500 False 1574 2008 90.7145 1 2534 2 chr7B.!!$F1 2533
6 TraesCS7A01G218900 chr7B 133706627 133707833 1206 True 484 484 74.7010 936 2155 1 chr7B.!!$R1 1219
7 TraesCS7A01G218900 chr6D 114224865 114226090 1225 False 477 477 74.4830 952 2168 1 chr6D.!!$F1 1216
8 TraesCS7A01G218900 chr6A 142773005 142774239 1234 False 453 453 74.2520 952 2168 1 chr6A.!!$F1 1216
9 TraesCS7A01G218900 chr6B 203894878 203895564 686 False 296 296 75.1770 1485 2168 1 chr6B.!!$F1 683
10 TraesCS7A01G218900 chrUn 91795179 91795825 646 True 206 206 73.4810 941 1590 1 chrUn.!!$R1 649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
492 521 0.179111 CGTACGTCATGTGCTCCCAT 60.179 55.0 7.22 0.0 0.0 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2299 2484 0.671781 GACAGCATCACCGCAGACTT 60.672 55.0 0.0 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.194116 ACGCAAAGGAGCAAAATGATGAT 59.806 39.130 0.00 0.00 0.00 2.45
33 34 3.550275 CGCAAAGGAGCAAAATGATGATG 59.450 43.478 0.00 0.00 0.00 3.07
34 35 4.501071 GCAAAGGAGCAAAATGATGATGT 58.499 39.130 0.00 0.00 0.00 3.06
38 39 6.446781 AAGGAGCAAAATGATGATGTAGTG 57.553 37.500 0.00 0.00 0.00 2.74
83 84 4.214758 GCAAGGTAACAACGTCCTATGTTT 59.785 41.667 8.51 0.00 40.14 2.83
126 132 4.884164 ACTAGCAATGAAGGTAAGCCAATC 59.116 41.667 0.00 0.00 37.19 2.67
160 175 3.498774 AACAAGACCTTCTGTGCAGAT 57.501 42.857 2.47 0.00 37.29 2.90
161 176 3.498774 ACAAGACCTTCTGTGCAGATT 57.501 42.857 2.47 0.00 37.29 2.40
162 177 3.825328 ACAAGACCTTCTGTGCAGATTT 58.175 40.909 2.47 0.00 37.29 2.17
163 178 4.210331 ACAAGACCTTCTGTGCAGATTTT 58.790 39.130 2.47 0.00 37.29 1.82
164 179 4.646492 ACAAGACCTTCTGTGCAGATTTTT 59.354 37.500 2.47 0.00 37.29 1.94
196 212 1.952263 GCAACTGGCACTGAAGGTC 59.048 57.895 0.00 0.00 43.97 3.85
257 273 1.401905 GCTAGCCGTGCAATTTTAGCT 59.598 47.619 2.29 0.00 32.79 3.32
259 275 3.673323 GCTAGCCGTGCAATTTTAGCTTT 60.673 43.478 2.29 0.00 32.79 3.51
320 338 0.440758 TGCACACGCTGTTTATACGC 59.559 50.000 0.00 0.00 39.64 4.42
463 492 4.232221 CTGCTAAACAAGAACAATGCTGG 58.768 43.478 0.00 0.00 0.00 4.85
489 518 1.132199 CGACGTACGTCATGTGCTCC 61.132 60.000 38.60 16.60 44.77 4.70
490 519 0.801067 GACGTACGTCATGTGCTCCC 60.801 60.000 36.60 11.61 44.02 4.30
491 520 1.214325 CGTACGTCATGTGCTCCCA 59.786 57.895 7.22 0.00 0.00 4.37
492 521 0.179111 CGTACGTCATGTGCTCCCAT 60.179 55.000 7.22 0.00 0.00 4.00
493 522 1.066454 CGTACGTCATGTGCTCCCATA 59.934 52.381 7.22 0.00 0.00 2.74
534 563 2.045438 CCGCCAGGTACCATGCAA 60.045 61.111 21.27 0.00 0.00 4.08
535 564 2.114670 CCGCCAGGTACCATGCAAG 61.115 63.158 21.27 10.94 0.00 4.01
536 565 2.764314 CGCCAGGTACCATGCAAGC 61.764 63.158 21.27 10.82 0.00 4.01
537 566 1.678635 GCCAGGTACCATGCAAGCA 60.679 57.895 15.94 0.00 0.00 3.91
593 622 6.640499 AGCTACACGTTACGAGATACTAGTAG 59.360 42.308 13.03 10.31 0.00 2.57
842 881 8.143835 GCTAAGTTGTTGAAATATATTGCCCAT 58.856 33.333 0.00 0.00 0.00 4.00
843 882 9.683069 CTAAGTTGTTGAAATATATTGCCCATC 57.317 33.333 0.00 0.00 0.00 3.51
844 883 7.902920 AGTTGTTGAAATATATTGCCCATCT 57.097 32.000 0.00 0.00 0.00 2.90
845 884 7.945134 AGTTGTTGAAATATATTGCCCATCTC 58.055 34.615 0.00 0.00 0.00 2.75
850 893 5.553162 TGAAATATATTGCCCATCTCCCTCT 59.447 40.000 0.00 0.00 0.00 3.69
854 897 0.341258 TTGCCCATCTCCCTCTCTCT 59.659 55.000 0.00 0.00 0.00 3.10
857 900 2.180973 TGCCCATCTCCCTCTCTCTATT 59.819 50.000 0.00 0.00 0.00 1.73
871 914 7.284944 CCCTCTCTCTATTAGTTCGGACTTTTA 59.715 40.741 0.00 0.00 37.33 1.52
885 928 7.223260 TCGGACTTTTAGATGAGTTAACTGA 57.777 36.000 14.14 4.68 0.00 3.41
1626 1751 1.990614 GGGCTTCCTCTCCTTCGGT 60.991 63.158 0.00 0.00 0.00 4.69
1707 1841 1.386533 CTCGCCGGAACCTCTACTTA 58.613 55.000 5.05 0.00 0.00 2.24
1926 2060 0.895530 ACGACTTCACCGACATGGAT 59.104 50.000 0.00 0.00 42.00 3.41
2209 2346 0.926155 CAGCACGTACTAGCATGCAG 59.074 55.000 21.98 16.92 40.63 4.41
2212 2379 0.460109 CACGTACTAGCATGCAGGCA 60.460 55.000 26.87 10.59 35.83 4.75
2213 2380 0.465705 ACGTACTAGCATGCAGGCAT 59.534 50.000 26.87 12.89 37.08 4.40
2254 2421 6.308371 TGAAGGTTGGTTCTTCGAAAATAC 57.692 37.500 0.00 0.00 42.43 1.89
2299 2484 8.744652 TGGTTCTTCAAAAATAAGACTCACAAA 58.255 29.630 0.00 0.00 32.81 2.83
2314 2504 0.593128 ACAAAAGTCTGCGGTGATGC 59.407 50.000 0.00 0.00 0.00 3.91
2318 2508 0.671781 AAGTCTGCGGTGATGCTGTC 60.672 55.000 0.00 0.00 35.55 3.51
2359 2557 2.739885 AGCTAGCTGATGGATAAGCG 57.260 50.000 18.57 0.00 44.34 4.68
2378 2576 2.867429 CGGCAGCTGGATAAGTTTTTG 58.133 47.619 17.12 0.00 0.00 2.44
2522 5922 7.703197 TGTTCGTTCCAAAAGGAAATTAAGTTC 59.297 33.333 7.11 7.11 40.03 3.01
2534 5934 7.836842 AGGAAATTAAGTTCAACACAAACTGT 58.163 30.769 16.69 0.00 37.06 3.55
2542 5942 2.804167 CACAAACTGTGCCCGCAA 59.196 55.556 0.00 0.00 41.89 4.85
2543 5943 1.140589 CACAAACTGTGCCCGCAAA 59.859 52.632 0.00 0.00 41.89 3.68
2544 5944 0.459237 CACAAACTGTGCCCGCAAAA 60.459 50.000 0.00 0.00 41.89 2.44
2545 5945 0.247736 ACAAACTGTGCCCGCAAAAA 59.752 45.000 0.00 0.00 0.00 1.94
2572 5972 9.850628 AAAAAGTTTAACACTAACTGAAAGGAC 57.149 29.630 0.00 0.00 33.35 3.85
2573 5973 7.563888 AAGTTTAACACTAACTGAAAGGACC 57.436 36.000 0.00 0.00 33.35 4.46
2574 5974 5.756833 AGTTTAACACTAACTGAAAGGACCG 59.243 40.000 0.00 0.00 32.78 4.79
2575 5975 3.832615 AACACTAACTGAAAGGACCGT 57.167 42.857 0.00 0.00 39.30 4.83
2576 5976 3.107642 ACACTAACTGAAAGGACCGTG 57.892 47.619 0.00 0.00 39.30 4.94
2577 5977 2.696707 ACACTAACTGAAAGGACCGTGA 59.303 45.455 0.00 0.00 39.30 4.35
2578 5978 3.133362 ACACTAACTGAAAGGACCGTGAA 59.867 43.478 0.00 0.00 39.30 3.18
2579 5979 4.124238 CACTAACTGAAAGGACCGTGAAA 58.876 43.478 0.00 0.00 39.30 2.69
2580 5980 4.573201 CACTAACTGAAAGGACCGTGAAAA 59.427 41.667 0.00 0.00 39.30 2.29
2581 5981 5.065474 CACTAACTGAAAGGACCGTGAAAAA 59.935 40.000 0.00 0.00 39.30 1.94
2602 6002 4.773323 AAAGATGCTTGTTTGCTAGACC 57.227 40.909 0.00 0.00 0.00 3.85
2603 6003 2.350522 AGATGCTTGTTTGCTAGACCG 58.649 47.619 0.00 0.00 0.00 4.79
2604 6004 0.804989 ATGCTTGTTTGCTAGACCGC 59.195 50.000 0.00 0.00 0.00 5.68
2605 6005 1.234615 TGCTTGTTTGCTAGACCGCC 61.235 55.000 0.00 0.00 0.00 6.13
2606 6006 0.955919 GCTTGTTTGCTAGACCGCCT 60.956 55.000 0.00 0.00 0.00 5.52
2607 6007 1.523758 CTTGTTTGCTAGACCGCCTT 58.476 50.000 0.00 0.00 0.00 4.35
2608 6008 1.880027 CTTGTTTGCTAGACCGCCTTT 59.120 47.619 0.00 0.00 0.00 3.11
2609 6009 1.975660 TGTTTGCTAGACCGCCTTTT 58.024 45.000 0.00 0.00 0.00 2.27
2610 6010 2.303175 TGTTTGCTAGACCGCCTTTTT 58.697 42.857 0.00 0.00 0.00 1.94
2611 6011 3.478509 TGTTTGCTAGACCGCCTTTTTA 58.521 40.909 0.00 0.00 0.00 1.52
2612 6012 3.251487 TGTTTGCTAGACCGCCTTTTTAC 59.749 43.478 0.00 0.00 0.00 2.01
2613 6013 2.103537 TGCTAGACCGCCTTTTTACC 57.896 50.000 0.00 0.00 0.00 2.85
2614 6014 1.348366 TGCTAGACCGCCTTTTTACCA 59.652 47.619 0.00 0.00 0.00 3.25
2615 6015 2.224572 TGCTAGACCGCCTTTTTACCAA 60.225 45.455 0.00 0.00 0.00 3.67
2616 6016 2.815503 GCTAGACCGCCTTTTTACCAAA 59.184 45.455 0.00 0.00 0.00 3.28
2617 6017 3.253921 GCTAGACCGCCTTTTTACCAAAA 59.746 43.478 0.00 0.00 0.00 2.44
2618 6018 4.261698 GCTAGACCGCCTTTTTACCAAAAA 60.262 41.667 0.00 0.00 37.99 1.94
2619 6019 4.948341 AGACCGCCTTTTTACCAAAAAT 57.052 36.364 0.00 0.00 39.43 1.82
2620 6020 4.627058 AGACCGCCTTTTTACCAAAAATG 58.373 39.130 0.00 0.00 39.43 2.32
2621 6021 4.342665 AGACCGCCTTTTTACCAAAAATGA 59.657 37.500 4.30 0.00 39.43 2.57
2622 6022 5.011635 AGACCGCCTTTTTACCAAAAATGAT 59.988 36.000 4.30 0.00 39.43 2.45
2623 6023 5.234752 ACCGCCTTTTTACCAAAAATGATC 58.765 37.500 4.30 0.00 39.43 2.92
2624 6024 4.629634 CCGCCTTTTTACCAAAAATGATCC 59.370 41.667 0.00 0.00 39.43 3.36
2625 6025 5.233988 CGCCTTTTTACCAAAAATGATCCA 58.766 37.500 0.00 0.00 39.43 3.41
2626 6026 5.348451 CGCCTTTTTACCAAAAATGATCCAG 59.652 40.000 0.00 0.00 39.43 3.86
2627 6027 6.463360 GCCTTTTTACCAAAAATGATCCAGA 58.537 36.000 0.00 0.00 39.43 3.86
2628 6028 7.105588 GCCTTTTTACCAAAAATGATCCAGAT 58.894 34.615 0.00 0.00 39.43 2.90
2629 6029 7.278646 GCCTTTTTACCAAAAATGATCCAGATC 59.721 37.037 0.47 0.47 39.43 2.75
2630 6030 7.489113 CCTTTTTACCAAAAATGATCCAGATCG 59.511 37.037 3.33 0.00 39.43 3.69
2631 6031 6.449635 TTTACCAAAAATGATCCAGATCGG 57.550 37.500 3.33 0.31 40.63 4.18
2632 6032 3.968265 ACCAAAAATGATCCAGATCGGT 58.032 40.909 3.33 0.88 40.63 4.69
2633 6033 4.344104 ACCAAAAATGATCCAGATCGGTT 58.656 39.130 3.33 0.00 40.63 4.44
2634 6034 5.505780 ACCAAAAATGATCCAGATCGGTTA 58.494 37.500 3.33 0.00 40.63 2.85
2635 6035 5.357032 ACCAAAAATGATCCAGATCGGTTAC 59.643 40.000 3.33 0.00 40.63 2.50
2636 6036 5.356751 CCAAAAATGATCCAGATCGGTTACA 59.643 40.000 3.33 4.11 40.63 2.41
2637 6037 6.127758 CCAAAAATGATCCAGATCGGTTACAA 60.128 38.462 3.33 0.00 40.63 2.41
2638 6038 6.683974 AAAATGATCCAGATCGGTTACAAG 57.316 37.500 3.33 0.00 40.63 3.16
2639 6039 5.614324 AATGATCCAGATCGGTTACAAGA 57.386 39.130 3.33 0.00 40.63 3.02
2640 6040 4.655762 TGATCCAGATCGGTTACAAGAG 57.344 45.455 3.33 0.00 40.63 2.85
2641 6041 4.023980 TGATCCAGATCGGTTACAAGAGT 58.976 43.478 3.33 0.00 40.63 3.24
2642 6042 4.466370 TGATCCAGATCGGTTACAAGAGTT 59.534 41.667 3.33 0.00 40.63 3.01
2643 6043 4.451629 TCCAGATCGGTTACAAGAGTTC 57.548 45.455 3.97 0.00 35.57 3.01
2644 6044 3.830178 TCCAGATCGGTTACAAGAGTTCA 59.170 43.478 3.97 0.00 35.57 3.18
2645 6045 3.927142 CCAGATCGGTTACAAGAGTTCAC 59.073 47.826 0.00 0.00 0.00 3.18
2646 6046 4.322049 CCAGATCGGTTACAAGAGTTCACT 60.322 45.833 0.00 0.00 0.00 3.41
2647 6047 5.105877 CCAGATCGGTTACAAGAGTTCACTA 60.106 44.000 0.00 0.00 0.00 2.74
2648 6048 6.387465 CAGATCGGTTACAAGAGTTCACTAA 58.613 40.000 0.00 0.00 0.00 2.24
2649 6049 6.866770 CAGATCGGTTACAAGAGTTCACTAAA 59.133 38.462 0.00 0.00 0.00 1.85
2650 6050 6.867293 AGATCGGTTACAAGAGTTCACTAAAC 59.133 38.462 0.00 0.00 38.21 2.01
2651 6051 5.291971 TCGGTTACAAGAGTTCACTAAACC 58.708 41.667 0.00 0.00 38.76 3.27
2652 6052 5.051816 CGGTTACAAGAGTTCACTAAACCA 58.948 41.667 0.00 0.00 38.76 3.67
2653 6053 5.050567 CGGTTACAAGAGTTCACTAAACCAC 60.051 44.000 0.00 0.00 38.76 4.16
2654 6054 5.237996 GGTTACAAGAGTTCACTAAACCACC 59.762 44.000 0.00 0.00 38.76 4.61
2655 6055 4.497291 ACAAGAGTTCACTAAACCACCA 57.503 40.909 0.00 0.00 38.76 4.17
2656 6056 4.196971 ACAAGAGTTCACTAAACCACCAC 58.803 43.478 0.00 0.00 38.76 4.16
2657 6057 3.487120 AGAGTTCACTAAACCACCACC 57.513 47.619 0.00 0.00 38.76 4.61
2658 6058 2.140717 GAGTTCACTAAACCACCACCG 58.859 52.381 0.00 0.00 38.76 4.94
2659 6059 1.487558 AGTTCACTAAACCACCACCGT 59.512 47.619 0.00 0.00 38.76 4.83
2660 6060 1.869132 GTTCACTAAACCACCACCGTC 59.131 52.381 0.00 0.00 31.20 4.79
2661 6061 0.032403 TCACTAAACCACCACCGTCG 59.968 55.000 0.00 0.00 0.00 5.12
2662 6062 1.301165 ACTAAACCACCACCGTCGC 60.301 57.895 0.00 0.00 0.00 5.19
2663 6063 1.301087 CTAAACCACCACCGTCGCA 60.301 57.895 0.00 0.00 0.00 5.10
2664 6064 0.881159 CTAAACCACCACCGTCGCAA 60.881 55.000 0.00 0.00 0.00 4.85
2665 6065 0.881159 TAAACCACCACCGTCGCAAG 60.881 55.000 0.00 0.00 0.00 4.01
2679 6079 4.681421 CAAGAGCGAGACCTTGCA 57.319 55.556 11.46 0.00 42.40 4.08
2680 6080 3.149899 CAAGAGCGAGACCTTGCAT 57.850 52.632 11.46 0.00 42.40 3.96
2681 6081 2.299993 CAAGAGCGAGACCTTGCATA 57.700 50.000 11.46 0.00 42.40 3.14
2682 6082 1.929836 CAAGAGCGAGACCTTGCATAC 59.070 52.381 11.46 3.32 42.40 2.39
2683 6083 1.479709 AGAGCGAGACCTTGCATACT 58.520 50.000 11.46 5.27 42.40 2.12
2684 6084 1.135915 AGAGCGAGACCTTGCATACTG 59.864 52.381 11.46 0.00 42.40 2.74
2685 6085 1.135139 GAGCGAGACCTTGCATACTGA 59.865 52.381 11.46 0.00 42.40 3.41
2686 6086 1.135915 AGCGAGACCTTGCATACTGAG 59.864 52.381 11.46 0.00 42.40 3.35
2687 6087 1.135139 GCGAGACCTTGCATACTGAGA 59.865 52.381 4.44 0.00 39.74 3.27
2688 6088 2.417379 GCGAGACCTTGCATACTGAGAA 60.417 50.000 4.44 0.00 39.74 2.87
2689 6089 3.849911 CGAGACCTTGCATACTGAGAAA 58.150 45.455 0.00 0.00 0.00 2.52
2690 6090 4.245660 CGAGACCTTGCATACTGAGAAAA 58.754 43.478 0.00 0.00 0.00 2.29
2691 6091 4.092091 CGAGACCTTGCATACTGAGAAAAC 59.908 45.833 0.00 0.00 0.00 2.43
2692 6092 4.973168 AGACCTTGCATACTGAGAAAACA 58.027 39.130 0.00 0.00 0.00 2.83
2693 6093 4.757149 AGACCTTGCATACTGAGAAAACAC 59.243 41.667 0.00 0.00 0.00 3.32
2694 6094 4.460263 ACCTTGCATACTGAGAAAACACA 58.540 39.130 0.00 0.00 0.00 3.72
2695 6095 5.072741 ACCTTGCATACTGAGAAAACACAT 58.927 37.500 0.00 0.00 0.00 3.21
2696 6096 5.536161 ACCTTGCATACTGAGAAAACACATT 59.464 36.000 0.00 0.00 0.00 2.71
2697 6097 6.040842 ACCTTGCATACTGAGAAAACACATTT 59.959 34.615 0.00 0.00 0.00 2.32
2698 6098 6.364165 CCTTGCATACTGAGAAAACACATTTG 59.636 38.462 0.00 0.00 0.00 2.32
2699 6099 5.771469 TGCATACTGAGAAAACACATTTGG 58.229 37.500 0.00 0.00 0.00 3.28
2700 6100 4.622740 GCATACTGAGAAAACACATTTGGC 59.377 41.667 0.00 0.00 0.00 4.52
2701 6101 3.354089 ACTGAGAAAACACATTTGGCG 57.646 42.857 0.00 0.00 0.00 5.69
2702 6102 2.053627 CTGAGAAAACACATTTGGCGC 58.946 47.619 0.00 0.00 0.00 6.53
2703 6103 1.269517 TGAGAAAACACATTTGGCGCC 60.270 47.619 22.73 22.73 0.00 6.53
2704 6104 1.000274 GAGAAAACACATTTGGCGCCT 60.000 47.619 29.70 3.84 0.00 5.52
2705 6105 1.412343 AGAAAACACATTTGGCGCCTT 59.588 42.857 29.70 10.06 0.00 4.35
2706 6106 2.158971 AGAAAACACATTTGGCGCCTTT 60.159 40.909 29.70 16.84 0.00 3.11
2707 6107 2.323968 AAACACATTTGGCGCCTTTT 57.676 40.000 29.70 9.03 0.00 2.27
2708 6108 3.460857 AAACACATTTGGCGCCTTTTA 57.539 38.095 29.70 10.46 0.00 1.52
2709 6109 2.432206 ACACATTTGGCGCCTTTTAC 57.568 45.000 29.70 0.00 0.00 2.01
2710 6110 1.683917 ACACATTTGGCGCCTTTTACA 59.316 42.857 29.70 1.94 0.00 2.41
2711 6111 2.288152 ACACATTTGGCGCCTTTTACAG 60.288 45.455 29.70 14.29 0.00 2.74
2712 6112 1.336795 ACATTTGGCGCCTTTTACAGC 60.337 47.619 29.70 0.00 0.00 4.40
2713 6113 0.965439 ATTTGGCGCCTTTTACAGCA 59.035 45.000 29.70 0.00 0.00 4.41
2714 6114 0.747255 TTTGGCGCCTTTTACAGCAA 59.253 45.000 29.70 7.02 0.00 3.91
2715 6115 0.965439 TTGGCGCCTTTTACAGCAAT 59.035 45.000 29.70 0.00 0.00 3.56
2716 6116 0.243365 TGGCGCCTTTTACAGCAATG 59.757 50.000 29.70 0.00 0.00 2.82
2717 6117 0.243636 GGCGCCTTTTACAGCAATGT 59.756 50.000 22.15 0.00 0.00 2.71
2718 6118 1.470890 GGCGCCTTTTACAGCAATGTA 59.529 47.619 22.15 0.00 0.00 2.29
2719 6119 2.099098 GGCGCCTTTTACAGCAATGTAT 59.901 45.455 22.15 0.00 0.00 2.29
2720 6120 3.314080 GGCGCCTTTTACAGCAATGTATA 59.686 43.478 22.15 0.00 0.00 1.47
2721 6121 4.023193 GGCGCCTTTTACAGCAATGTATAT 60.023 41.667 22.15 0.00 0.00 0.86
2722 6122 4.911610 GCGCCTTTTACAGCAATGTATATG 59.088 41.667 0.00 0.00 0.00 1.78
2723 6123 4.911610 CGCCTTTTACAGCAATGTATATGC 59.088 41.667 0.00 0.00 44.15 3.14
2735 6135 7.832503 GCAATGTATATGCTTGTTTTCCTTT 57.167 32.000 0.00 0.00 40.64 3.11
2736 6136 7.898946 GCAATGTATATGCTTGTTTTCCTTTC 58.101 34.615 0.00 0.00 40.64 2.62
2737 6137 7.010460 GCAATGTATATGCTTGTTTTCCTTTCC 59.990 37.037 0.00 0.00 40.64 3.13
2738 6138 7.961326 ATGTATATGCTTGTTTTCCTTTCCT 57.039 32.000 0.00 0.00 0.00 3.36
2739 6139 9.474313 AATGTATATGCTTGTTTTCCTTTCCTA 57.526 29.630 0.00 0.00 0.00 2.94
2740 6140 8.871629 TGTATATGCTTGTTTTCCTTTCCTAA 57.128 30.769 0.00 0.00 0.00 2.69
2741 6141 9.303116 TGTATATGCTTGTTTTCCTTTCCTAAA 57.697 29.630 0.00 0.00 0.00 1.85
2786 6186 7.667043 TTTTTAGTTTATGTGCTCATCTCGT 57.333 32.000 4.19 0.00 35.70 4.18
2787 6187 7.667043 TTTTAGTTTATGTGCTCATCTCGTT 57.333 32.000 4.19 0.00 35.70 3.85
2788 6188 7.667043 TTTAGTTTATGTGCTCATCTCGTTT 57.333 32.000 4.19 0.00 35.70 3.60
2789 6189 7.667043 TTAGTTTATGTGCTCATCTCGTTTT 57.333 32.000 4.19 0.00 35.70 2.43
2790 6190 6.560253 AGTTTATGTGCTCATCTCGTTTTT 57.440 33.333 4.19 0.00 35.70 1.94
2816 6216 9.809096 TTTTAGAAGCAATGTGTTTGTTTATCA 57.191 25.926 0.00 0.00 38.67 2.15
2817 6217 8.795786 TTAGAAGCAATGTGTTTGTTTATCAC 57.204 30.769 0.00 0.00 38.67 3.06
2818 6218 7.042797 AGAAGCAATGTGTTTGTTTATCACT 57.957 32.000 0.00 0.00 38.67 3.41
2819 6219 7.491682 AGAAGCAATGTGTTTGTTTATCACTT 58.508 30.769 0.00 0.00 38.67 3.16
2820 6220 7.981225 AGAAGCAATGTGTTTGTTTATCACTTT 59.019 29.630 0.00 0.00 38.67 2.66
2821 6221 8.491331 AAGCAATGTGTTTGTTTATCACTTTT 57.509 26.923 0.00 0.00 37.04 2.27
2822 6222 8.491331 AGCAATGTGTTTGTTTATCACTTTTT 57.509 26.923 0.00 0.00 37.65 1.94
2852 6252 9.019764 AGTTTCAATGTGTTCGTTTATCTTTTG 57.980 29.630 0.00 0.00 0.00 2.44
2853 6253 8.803799 GTTTCAATGTGTTCGTTTATCTTTTGT 58.196 29.630 0.00 0.00 0.00 2.83
2854 6254 8.918961 TTCAATGTGTTCGTTTATCTTTTGTT 57.081 26.923 0.00 0.00 0.00 2.83
2855 6255 8.918961 TCAATGTGTTCGTTTATCTTTTGTTT 57.081 26.923 0.00 0.00 0.00 2.83
2856 6256 9.360093 TCAATGTGTTCGTTTATCTTTTGTTTT 57.640 25.926 0.00 0.00 0.00 2.43
2857 6257 9.965748 CAATGTGTTCGTTTATCTTTTGTTTTT 57.034 25.926 0.00 0.00 0.00 1.94
2879 6279 8.918961 TTTTTGAGAACGATGTGTTTGTTTAT 57.081 26.923 0.00 0.00 42.09 1.40
2880 6280 8.555166 TTTTGAGAACGATGTGTTTGTTTATC 57.445 30.769 0.00 0.00 42.09 1.75
2881 6281 7.490962 TTGAGAACGATGTGTTTGTTTATCT 57.509 32.000 0.00 0.00 42.09 1.98
2882 6282 8.596271 TTGAGAACGATGTGTTTGTTTATCTA 57.404 30.769 0.00 0.00 42.09 1.98
2883 6283 8.596271 TGAGAACGATGTGTTTGTTTATCTAA 57.404 30.769 0.00 0.00 42.09 2.10
2884 6284 8.492748 TGAGAACGATGTGTTTGTTTATCTAAC 58.507 33.333 0.00 0.00 42.09 2.34
2885 6285 8.373048 AGAACGATGTGTTTGTTTATCTAACA 57.627 30.769 0.00 0.00 44.81 2.41
2886 6286 8.495949 AGAACGATGTGTTTGTTTATCTAACAG 58.504 33.333 0.00 0.00 46.81 3.16
2887 6287 7.129109 ACGATGTGTTTGTTTATCTAACAGG 57.871 36.000 0.00 0.00 46.81 4.00
2888 6288 6.708949 ACGATGTGTTTGTTTATCTAACAGGT 59.291 34.615 0.00 0.00 46.81 4.00
2889 6289 7.874016 ACGATGTGTTTGTTTATCTAACAGGTA 59.126 33.333 0.00 0.00 46.81 3.08
2890 6290 8.714179 CGATGTGTTTGTTTATCTAACAGGTAA 58.286 33.333 0.00 0.00 46.81 2.85
2903 6303 7.739498 TCTAACAGGTAAATGTTGTTCTTCC 57.261 36.000 2.48 0.00 43.14 3.46
2904 6304 7.514721 TCTAACAGGTAAATGTTGTTCTTCCT 58.485 34.615 2.48 0.00 43.14 3.36
2905 6305 6.635030 AACAGGTAAATGTTGTTCTTCCTC 57.365 37.500 0.00 0.00 41.76 3.71
2906 6306 4.755123 ACAGGTAAATGTTGTTCTTCCTCG 59.245 41.667 0.00 0.00 0.00 4.63
2907 6307 4.994852 CAGGTAAATGTTGTTCTTCCTCGA 59.005 41.667 0.00 0.00 0.00 4.04
2908 6308 5.468746 CAGGTAAATGTTGTTCTTCCTCGAA 59.531 40.000 0.00 0.00 0.00 3.71
2909 6309 6.017440 CAGGTAAATGTTGTTCTTCCTCGAAA 60.017 38.462 0.00 0.00 0.00 3.46
2910 6310 6.544564 AGGTAAATGTTGTTCTTCCTCGAAAA 59.455 34.615 0.00 0.00 0.00 2.29
2911 6311 7.067737 AGGTAAATGTTGTTCTTCCTCGAAAAA 59.932 33.333 0.00 0.00 0.00 1.94
2941 6341 6.859017 GGTAACTGTTGTTTTGAAAGAAGGA 58.141 36.000 2.69 0.00 37.59 3.36
2942 6342 7.317390 GGTAACTGTTGTTTTGAAAGAAGGAA 58.683 34.615 2.69 0.00 37.59 3.36
2943 6343 7.815549 GGTAACTGTTGTTTTGAAAGAAGGAAA 59.184 33.333 2.69 0.00 37.59 3.13
2944 6344 9.198837 GTAACTGTTGTTTTGAAAGAAGGAAAA 57.801 29.630 2.69 0.00 37.59 2.29
2945 6345 8.669946 AACTGTTGTTTTGAAAGAAGGAAAAA 57.330 26.923 0.00 0.00 31.37 1.94
2946 6346 8.083462 ACTGTTGTTTTGAAAGAAGGAAAAAC 57.917 30.769 0.00 0.00 40.98 2.43
2947 6347 7.931407 ACTGTTGTTTTGAAAGAAGGAAAAACT 59.069 29.630 10.22 0.00 41.11 2.66
2948 6348 8.082334 TGTTGTTTTGAAAGAAGGAAAAACTG 57.918 30.769 10.22 0.00 41.11 3.16
2949 6349 7.928706 TGTTGTTTTGAAAGAAGGAAAAACTGA 59.071 29.630 10.22 0.00 41.11 3.41
2950 6350 7.883229 TGTTTTGAAAGAAGGAAAAACTGAC 57.117 32.000 10.22 0.00 41.11 3.51
2951 6351 6.584563 TGTTTTGAAAGAAGGAAAAACTGACG 59.415 34.615 10.22 0.00 41.11 4.35
2952 6352 4.287238 TGAAAGAAGGAAAAACTGACGC 57.713 40.909 0.00 0.00 0.00 5.19
2953 6353 3.945285 TGAAAGAAGGAAAAACTGACGCT 59.055 39.130 0.00 0.00 0.00 5.07
2954 6354 4.035208 TGAAAGAAGGAAAAACTGACGCTC 59.965 41.667 0.00 0.00 0.00 5.03
2955 6355 3.477210 AGAAGGAAAAACTGACGCTCT 57.523 42.857 0.00 0.00 0.00 4.09
2956 6356 4.602340 AGAAGGAAAAACTGACGCTCTA 57.398 40.909 0.00 0.00 0.00 2.43
2957 6357 4.957296 AGAAGGAAAAACTGACGCTCTAA 58.043 39.130 0.00 0.00 0.00 2.10
2958 6358 5.552178 AGAAGGAAAAACTGACGCTCTAAT 58.448 37.500 0.00 0.00 0.00 1.73
2959 6359 5.639931 AGAAGGAAAAACTGACGCTCTAATC 59.360 40.000 0.00 0.00 0.00 1.75
2960 6360 4.254492 AGGAAAAACTGACGCTCTAATCC 58.746 43.478 0.00 0.00 0.00 3.01
2961 6361 4.000988 GGAAAAACTGACGCTCTAATCCA 58.999 43.478 0.00 0.00 0.00 3.41
2962 6362 4.093556 GGAAAAACTGACGCTCTAATCCAG 59.906 45.833 0.00 0.00 0.00 3.86
2963 6363 3.963428 AAACTGACGCTCTAATCCAGT 57.037 42.857 0.00 0.00 39.49 4.00
2964 6364 3.512033 AACTGACGCTCTAATCCAGTC 57.488 47.619 0.00 0.00 37.12 3.51
2965 6365 1.751924 ACTGACGCTCTAATCCAGTCC 59.248 52.381 0.00 0.00 33.27 3.85
2966 6366 2.028130 CTGACGCTCTAATCCAGTCCT 58.972 52.381 0.00 0.00 0.00 3.85
2967 6367 2.025155 TGACGCTCTAATCCAGTCCTC 58.975 52.381 0.00 0.00 0.00 3.71
2968 6368 2.303175 GACGCTCTAATCCAGTCCTCT 58.697 52.381 0.00 0.00 0.00 3.69
2969 6369 2.028130 ACGCTCTAATCCAGTCCTCTG 58.972 52.381 0.00 0.00 41.01 3.35
2970 6370 1.269517 CGCTCTAATCCAGTCCTCTGC 60.270 57.143 0.00 0.00 40.09 4.26
2971 6371 2.038659 GCTCTAATCCAGTCCTCTGCT 58.961 52.381 0.00 0.00 40.09 4.24
2972 6372 2.224018 GCTCTAATCCAGTCCTCTGCTG 60.224 54.545 0.00 0.00 40.09 4.41
2973 6373 1.759445 TCTAATCCAGTCCTCTGCTGC 59.241 52.381 0.00 0.00 40.09 5.25
2974 6374 0.461548 TAATCCAGTCCTCTGCTGCG 59.538 55.000 0.00 0.00 40.09 5.18
2975 6375 2.866085 AATCCAGTCCTCTGCTGCGC 62.866 60.000 0.00 0.00 40.09 6.09
2976 6376 4.079850 CCAGTCCTCTGCTGCGCT 62.080 66.667 9.73 0.00 40.09 5.92
2977 6377 2.714991 CCAGTCCTCTGCTGCGCTA 61.715 63.158 9.73 0.00 40.09 4.26
2978 6378 1.216444 CAGTCCTCTGCTGCGCTAA 59.784 57.895 9.73 0.00 34.79 3.09
2979 6379 0.390340 CAGTCCTCTGCTGCGCTAAA 60.390 55.000 9.73 0.00 34.79 1.85
2980 6380 0.539051 AGTCCTCTGCTGCGCTAAAT 59.461 50.000 9.73 0.00 0.00 1.40
2981 6381 1.757118 AGTCCTCTGCTGCGCTAAATA 59.243 47.619 9.73 0.00 0.00 1.40
2982 6382 2.168521 AGTCCTCTGCTGCGCTAAATAA 59.831 45.455 9.73 0.00 0.00 1.40
2983 6383 2.285488 GTCCTCTGCTGCGCTAAATAAC 59.715 50.000 9.73 0.00 0.00 1.89
2984 6384 2.093711 TCCTCTGCTGCGCTAAATAACA 60.094 45.455 9.73 0.00 0.00 2.41
2985 6385 2.286294 CCTCTGCTGCGCTAAATAACAG 59.714 50.000 9.73 5.78 0.00 3.16
2986 6386 2.279741 TCTGCTGCGCTAAATAACAGG 58.720 47.619 9.73 0.00 0.00 4.00
2987 6387 2.093711 TCTGCTGCGCTAAATAACAGGA 60.094 45.455 9.73 0.00 0.00 3.86
2988 6388 2.279741 TGCTGCGCTAAATAACAGGAG 58.720 47.619 9.73 0.00 0.00 3.69
2989 6389 2.093711 TGCTGCGCTAAATAACAGGAGA 60.094 45.455 9.73 0.00 0.00 3.71
2990 6390 2.936498 GCTGCGCTAAATAACAGGAGAA 59.064 45.455 9.73 0.00 0.00 2.87
2991 6391 3.242446 GCTGCGCTAAATAACAGGAGAAC 60.242 47.826 9.73 0.00 0.00 3.01
2992 6392 4.184629 CTGCGCTAAATAACAGGAGAACT 58.815 43.478 9.73 0.00 0.00 3.01
2993 6393 4.181578 TGCGCTAAATAACAGGAGAACTC 58.818 43.478 9.73 0.00 0.00 3.01
3002 6402 3.965660 GGAGAACTCCCCCGCATA 58.034 61.111 9.50 0.00 43.94 3.14
3003 6403 2.218066 GGAGAACTCCCCCGCATAA 58.782 57.895 9.50 0.00 43.94 1.90
3004 6404 0.544697 GGAGAACTCCCCCGCATAAA 59.455 55.000 9.50 0.00 43.94 1.40
3005 6405 1.064979 GGAGAACTCCCCCGCATAAAA 60.065 52.381 9.50 0.00 43.94 1.52
3006 6406 2.619590 GGAGAACTCCCCCGCATAAAAA 60.620 50.000 9.50 0.00 43.94 1.94
3068 6468 8.926715 TTTTTGAGTAAAAAGGAAAGAAGCTC 57.073 30.769 0.00 0.00 39.99 4.09
3069 6469 7.881775 TTTGAGTAAAAAGGAAAGAAGCTCT 57.118 32.000 0.00 0.00 0.00 4.09
3070 6470 6.867662 TGAGTAAAAAGGAAAGAAGCTCTG 57.132 37.500 0.00 0.00 0.00 3.35
3071 6471 6.591935 TGAGTAAAAAGGAAAGAAGCTCTGA 58.408 36.000 0.00 0.00 0.00 3.27
3072 6472 7.227156 TGAGTAAAAAGGAAAGAAGCTCTGAT 58.773 34.615 0.00 0.00 0.00 2.90
3073 6473 7.389053 TGAGTAAAAAGGAAAGAAGCTCTGATC 59.611 37.037 0.00 0.00 0.00 2.92
3074 6474 5.973899 AAAAAGGAAAGAAGCTCTGATCC 57.026 39.130 0.00 0.00 34.98 3.36
3075 6475 4.647564 AAAGGAAAGAAGCTCTGATCCA 57.352 40.909 10.19 0.00 36.37 3.41
3076 6476 3.910568 AGGAAAGAAGCTCTGATCCAG 57.089 47.619 10.19 0.00 36.37 3.86
3077 6477 3.180507 AGGAAAGAAGCTCTGATCCAGT 58.819 45.455 10.19 0.00 36.37 4.00
3078 6478 3.197549 AGGAAAGAAGCTCTGATCCAGTC 59.802 47.826 10.19 0.00 36.37 3.51
3079 6479 3.530535 GAAAGAAGCTCTGATCCAGTCC 58.469 50.000 0.00 0.00 32.61 3.85
3080 6480 2.548464 AGAAGCTCTGATCCAGTCCT 57.452 50.000 0.00 0.00 32.61 3.85
3081 6481 2.387757 AGAAGCTCTGATCCAGTCCTC 58.612 52.381 0.00 0.00 32.61 3.71
3082 6482 2.024080 AGAAGCTCTGATCCAGTCCTCT 60.024 50.000 0.00 0.00 32.61 3.69
3083 6483 3.204158 AGAAGCTCTGATCCAGTCCTCTA 59.796 47.826 0.00 0.00 32.61 2.43
3084 6484 2.944129 AGCTCTGATCCAGTCCTCTAC 58.056 52.381 0.00 0.00 32.61 2.59
3085 6485 2.513738 AGCTCTGATCCAGTCCTCTACT 59.486 50.000 0.00 0.00 39.81 2.57
3086 6486 3.719479 AGCTCTGATCCAGTCCTCTACTA 59.281 47.826 0.00 0.00 35.76 1.82
3087 6487 3.818773 GCTCTGATCCAGTCCTCTACTAC 59.181 52.174 0.00 0.00 35.76 2.73
3088 6488 4.394729 CTCTGATCCAGTCCTCTACTACC 58.605 52.174 0.00 0.00 35.76 3.18
3089 6489 4.048600 TCTGATCCAGTCCTCTACTACCT 58.951 47.826 0.00 0.00 35.76 3.08
3090 6490 5.225227 TCTGATCCAGTCCTCTACTACCTA 58.775 45.833 0.00 0.00 35.76 3.08
3091 6491 5.852807 TCTGATCCAGTCCTCTACTACCTAT 59.147 44.000 0.00 0.00 35.76 2.57
3092 6492 7.023744 TCTGATCCAGTCCTCTACTACCTATA 58.976 42.308 0.00 0.00 35.76 1.31
3093 6493 7.685052 TCTGATCCAGTCCTCTACTACCTATAT 59.315 40.741 0.00 0.00 35.76 0.86
3094 6494 8.233349 TGATCCAGTCCTCTACTACCTATATT 57.767 38.462 0.00 0.00 35.76 1.28
3095 6495 8.110271 TGATCCAGTCCTCTACTACCTATATTG 58.890 40.741 0.00 0.00 35.76 1.90
3096 6496 6.791371 TCCAGTCCTCTACTACCTATATTGG 58.209 44.000 1.22 1.22 35.76 3.16
3097 6497 5.952947 CCAGTCCTCTACTACCTATATTGGG 59.047 48.000 8.13 0.85 35.76 4.12
3098 6498 5.419471 CAGTCCTCTACTACCTATATTGGGC 59.581 48.000 8.13 0.00 35.76 5.36
3099 6499 4.710865 GTCCTCTACTACCTATATTGGGCC 59.289 50.000 8.13 0.00 0.00 5.80
3100 6500 4.358918 TCCTCTACTACCTATATTGGGCCA 59.641 45.833 0.00 0.00 0.00 5.36
3101 6501 4.712337 CCTCTACTACCTATATTGGGCCAG 59.288 50.000 6.23 0.00 0.00 4.85
3102 6502 4.684724 TCTACTACCTATATTGGGCCAGG 58.315 47.826 6.23 6.79 0.00 4.45
3103 6503 1.985895 ACTACCTATATTGGGCCAGGC 59.014 52.381 6.23 1.26 0.00 4.85
3114 6514 1.228276 GGCCAGGCCCAGTATAAGC 60.228 63.158 21.62 0.00 44.06 3.09
3115 6515 1.598130 GCCAGGCCCAGTATAAGCG 60.598 63.158 0.00 0.00 0.00 4.68
3116 6516 1.071471 CCAGGCCCAGTATAAGCGG 59.929 63.158 0.00 0.00 0.00 5.52
3117 6517 1.598130 CAGGCCCAGTATAAGCGGC 60.598 63.158 0.00 0.00 40.85 6.53
3118 6518 2.070039 AGGCCCAGTATAAGCGGCA 61.070 57.895 0.00 0.00 43.50 5.69
3119 6519 1.153046 GGCCCAGTATAAGCGGCAA 60.153 57.895 1.45 0.00 43.50 4.52
3120 6520 0.750182 GGCCCAGTATAAGCGGCAAA 60.750 55.000 1.45 0.00 43.50 3.68
3121 6521 1.099689 GCCCAGTATAAGCGGCAAAA 58.900 50.000 1.45 0.00 41.25 2.44
3122 6522 1.474879 GCCCAGTATAAGCGGCAAAAA 59.525 47.619 1.45 0.00 41.25 1.94
3123 6523 2.479560 GCCCAGTATAAGCGGCAAAAAG 60.480 50.000 1.45 0.00 41.25 2.27
3124 6524 2.099098 CCCAGTATAAGCGGCAAAAAGG 59.901 50.000 1.45 0.00 0.00 3.11
3125 6525 3.013921 CCAGTATAAGCGGCAAAAAGGA 58.986 45.455 1.45 0.00 0.00 3.36
3126 6526 3.632145 CCAGTATAAGCGGCAAAAAGGAT 59.368 43.478 1.45 0.00 0.00 3.24
3127 6527 4.097892 CCAGTATAAGCGGCAAAAAGGATT 59.902 41.667 1.45 0.00 0.00 3.01
3128 6528 5.273944 CAGTATAAGCGGCAAAAAGGATTC 58.726 41.667 1.45 0.00 0.00 2.52
3129 6529 2.911819 TAAGCGGCAAAAAGGATTCG 57.088 45.000 1.45 0.00 0.00 3.34
3130 6530 0.388520 AAGCGGCAAAAAGGATTCGC 60.389 50.000 1.45 0.00 42.91 4.70
3131 6531 1.080839 GCGGCAAAAAGGATTCGCA 60.081 52.632 0.00 0.00 42.27 5.10
3132 6532 0.665972 GCGGCAAAAAGGATTCGCAA 60.666 50.000 0.00 0.00 42.27 4.85
3133 6533 1.059942 CGGCAAAAAGGATTCGCAAC 58.940 50.000 0.00 0.00 0.00 4.17
3134 6534 1.601663 CGGCAAAAAGGATTCGCAACA 60.602 47.619 0.00 0.00 0.00 3.33
3135 6535 2.061028 GGCAAAAAGGATTCGCAACAG 58.939 47.619 0.00 0.00 0.00 3.16
3136 6536 2.545742 GGCAAAAAGGATTCGCAACAGT 60.546 45.455 0.00 0.00 0.00 3.55
3137 6537 3.305064 GGCAAAAAGGATTCGCAACAGTA 60.305 43.478 0.00 0.00 0.00 2.74
3138 6538 3.914364 GCAAAAAGGATTCGCAACAGTAG 59.086 43.478 0.00 0.00 0.00 2.57
3139 6539 4.320202 GCAAAAAGGATTCGCAACAGTAGA 60.320 41.667 0.00 0.00 0.00 2.59
3140 6540 5.147162 CAAAAAGGATTCGCAACAGTAGAC 58.853 41.667 0.00 0.00 0.00 2.59
3141 6541 2.674796 AGGATTCGCAACAGTAGACC 57.325 50.000 0.00 0.00 0.00 3.85
3142 6542 1.899814 AGGATTCGCAACAGTAGACCA 59.100 47.619 0.00 0.00 0.00 4.02
3143 6543 2.301870 AGGATTCGCAACAGTAGACCAA 59.698 45.455 0.00 0.00 0.00 3.67
3144 6544 2.673368 GGATTCGCAACAGTAGACCAAG 59.327 50.000 0.00 0.00 0.00 3.61
3145 6545 1.508632 TTCGCAACAGTAGACCAAGC 58.491 50.000 0.00 0.00 0.00 4.01
3146 6546 0.391228 TCGCAACAGTAGACCAAGCA 59.609 50.000 0.00 0.00 0.00 3.91
3147 6547 0.792640 CGCAACAGTAGACCAAGCAG 59.207 55.000 0.00 0.00 0.00 4.24
3148 6548 1.605457 CGCAACAGTAGACCAAGCAGA 60.605 52.381 0.00 0.00 0.00 4.26
3149 6549 2.072298 GCAACAGTAGACCAAGCAGAG 58.928 52.381 0.00 0.00 0.00 3.35
3150 6550 2.072298 CAACAGTAGACCAAGCAGAGC 58.928 52.381 0.00 0.00 0.00 4.09
3151 6551 0.610687 ACAGTAGACCAAGCAGAGCC 59.389 55.000 0.00 0.00 0.00 4.70
3152 6552 0.610174 CAGTAGACCAAGCAGAGCCA 59.390 55.000 0.00 0.00 0.00 4.75
3153 6553 0.901124 AGTAGACCAAGCAGAGCCAG 59.099 55.000 0.00 0.00 0.00 4.85
3154 6554 0.742635 GTAGACCAAGCAGAGCCAGC 60.743 60.000 0.00 0.00 0.00 4.85
3155 6555 1.194121 TAGACCAAGCAGAGCCAGCA 61.194 55.000 0.00 0.00 0.00 4.41
3156 6556 1.601759 GACCAAGCAGAGCCAGCAA 60.602 57.895 0.00 0.00 0.00 3.91
3157 6557 1.584380 GACCAAGCAGAGCCAGCAAG 61.584 60.000 0.00 0.00 0.00 4.01
3158 6558 2.567049 CAAGCAGAGCCAGCAAGC 59.433 61.111 0.00 0.00 0.00 4.01
3160 6560 1.972223 AAGCAGAGCCAGCAAGCTG 60.972 57.895 14.91 14.91 45.15 4.24
3161 6561 4.117661 GCAGAGCCAGCAAGCTGC 62.118 66.667 16.33 11.61 45.15 5.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.074405 AGGTGTCTCGGTACCACTACA 59.926 52.381 13.54 9.29 39.46 2.74
33 34 1.471684 CAGGTGTCTCGGTACCACTAC 59.528 57.143 13.54 6.63 39.46 2.73
34 35 1.615116 CCAGGTGTCTCGGTACCACTA 60.615 57.143 13.54 0.00 39.46 2.74
38 39 2.577593 GCCAGGTGTCTCGGTACC 59.422 66.667 0.16 0.16 37.23 3.34
126 132 3.191371 GGTCTTGTTTACCTTGCATCCTG 59.809 47.826 0.00 0.00 33.97 3.86
164 179 4.081420 TGCCAGTTGCTAAAGTTGGAAAAA 60.081 37.500 0.00 0.00 42.00 1.94
165 180 3.449018 TGCCAGTTGCTAAAGTTGGAAAA 59.551 39.130 0.00 0.00 42.00 2.29
166 181 3.027412 TGCCAGTTGCTAAAGTTGGAAA 58.973 40.909 0.00 0.00 42.00 3.13
167 182 2.360801 GTGCCAGTTGCTAAAGTTGGAA 59.639 45.455 0.00 0.00 42.00 3.53
177 193 0.536006 GACCTTCAGTGCCAGTTGCT 60.536 55.000 0.00 0.00 42.00 3.91
257 273 2.669113 CGTCCGTGATTCCGACAGTAAA 60.669 50.000 0.00 0.00 0.00 2.01
259 275 0.448990 CGTCCGTGATTCCGACAGTA 59.551 55.000 0.00 0.00 0.00 2.74
490 519 6.013898 AGCCTGCCTATATATAGCCATGTATG 60.014 42.308 13.49 0.00 0.00 2.39
491 520 6.087456 AGCCTGCCTATATATAGCCATGTAT 58.913 40.000 13.49 0.00 0.00 2.29
492 521 5.467738 AGCCTGCCTATATATAGCCATGTA 58.532 41.667 13.49 0.46 0.00 2.29
493 522 4.302067 AGCCTGCCTATATATAGCCATGT 58.698 43.478 13.49 0.00 0.00 3.21
536 565 2.983592 GAAGCCGGGTGGTGGTTG 60.984 66.667 7.07 0.00 37.67 3.77
537 566 4.280019 GGAAGCCGGGTGGTGGTT 62.280 66.667 7.07 0.00 37.67 3.67
564 593 4.533225 ATCTCGTAACGTGTAGCTAGTG 57.467 45.455 0.00 0.00 0.00 2.74
619 648 0.664761 GCAAGCACAAGAGCAGACAA 59.335 50.000 0.00 0.00 36.85 3.18
842 881 4.659368 TCCGAACTAATAGAGAGAGGGAGA 59.341 45.833 0.00 0.00 0.00 3.71
843 882 4.758165 GTCCGAACTAATAGAGAGAGGGAG 59.242 50.000 0.00 0.00 0.00 4.30
844 883 4.412858 AGTCCGAACTAATAGAGAGAGGGA 59.587 45.833 0.00 0.00 32.59 4.20
845 884 4.721132 AGTCCGAACTAATAGAGAGAGGG 58.279 47.826 0.00 0.00 32.59 4.30
850 893 9.404848 TCATCTAAAAGTCCGAACTAATAGAGA 57.595 33.333 0.00 0.13 36.78 3.10
857 900 8.800332 AGTTAACTCATCTAAAAGTCCGAACTA 58.200 33.333 1.12 0.00 33.48 2.24
871 914 7.609146 TGAATTCATGCTTCAGTTAACTCATCT 59.391 33.333 4.77 0.00 0.00 2.90
885 928 8.059798 AGTTAGCAACTATTGAATTCATGCTT 57.940 30.769 28.85 15.01 42.21 3.91
945 991 2.182791 CTCAGCCGATGCGTCACT 59.817 61.111 6.75 0.00 44.33 3.41
1626 1751 4.853142 AGCTCCGGCCGGATGGTA 62.853 66.667 45.15 24.71 44.24 3.25
2215 2382 5.700722 ACCTTCAATATACTGCATGCATG 57.299 39.130 22.97 22.70 0.00 4.06
2216 2383 5.010314 CCAACCTTCAATATACTGCATGCAT 59.990 40.000 22.97 13.83 0.00 3.96
2217 2384 4.338964 CCAACCTTCAATATACTGCATGCA 59.661 41.667 21.29 21.29 0.00 3.96
2218 2385 4.339247 ACCAACCTTCAATATACTGCATGC 59.661 41.667 11.82 11.82 0.00 4.06
2219 2386 6.319658 AGAACCAACCTTCAATATACTGCATG 59.680 38.462 0.00 0.00 0.00 4.06
2220 2387 6.426587 AGAACCAACCTTCAATATACTGCAT 58.573 36.000 0.00 0.00 0.00 3.96
2221 2388 5.815581 AGAACCAACCTTCAATATACTGCA 58.184 37.500 0.00 0.00 0.00 4.41
2222 2389 6.456988 CGAAGAACCAACCTTCAATATACTGC 60.457 42.308 0.00 0.00 39.86 4.40
2223 2390 6.816640 TCGAAGAACCAACCTTCAATATACTG 59.183 38.462 0.00 0.00 39.86 2.74
2254 2421 2.223688 CCATCTAGACTTGTGAGAGCCG 60.224 54.545 0.00 0.00 0.00 5.52
2299 2484 0.671781 GACAGCATCACCGCAGACTT 60.672 55.000 0.00 0.00 0.00 3.01
2304 2489 2.125952 CTCGACAGCATCACCGCA 60.126 61.111 0.00 0.00 0.00 5.69
2359 2557 3.942130 ACAAAAACTTATCCAGCTGCC 57.058 42.857 8.66 0.00 0.00 4.85
2378 2576 8.328864 GCAGCATAACACTAACTTATACAGAAC 58.671 37.037 0.00 0.00 0.00 3.01
2546 5946 9.850628 GTCCTTTCAGTTAGTGTTAAACTTTTT 57.149 29.630 0.00 0.00 40.56 1.94
2547 5947 8.464404 GGTCCTTTCAGTTAGTGTTAAACTTTT 58.536 33.333 0.00 0.00 40.56 2.27
2548 5948 7.201670 CGGTCCTTTCAGTTAGTGTTAAACTTT 60.202 37.037 0.00 0.00 40.56 2.66
2549 5949 6.259387 CGGTCCTTTCAGTTAGTGTTAAACTT 59.741 38.462 0.00 0.00 40.56 2.66
2550 5950 5.756833 CGGTCCTTTCAGTTAGTGTTAAACT 59.243 40.000 0.00 0.00 43.40 2.66
2551 5951 5.525012 ACGGTCCTTTCAGTTAGTGTTAAAC 59.475 40.000 0.00 0.00 0.00 2.01
2552 5952 5.524646 CACGGTCCTTTCAGTTAGTGTTAAA 59.475 40.000 0.00 0.00 0.00 1.52
2553 5953 5.051816 CACGGTCCTTTCAGTTAGTGTTAA 58.948 41.667 0.00 0.00 0.00 2.01
2554 5954 4.341806 TCACGGTCCTTTCAGTTAGTGTTA 59.658 41.667 0.00 0.00 0.00 2.41
2555 5955 3.133362 TCACGGTCCTTTCAGTTAGTGTT 59.867 43.478 0.00 0.00 0.00 3.32
2556 5956 2.696707 TCACGGTCCTTTCAGTTAGTGT 59.303 45.455 0.00 0.00 0.00 3.55
2557 5957 3.380479 TCACGGTCCTTTCAGTTAGTG 57.620 47.619 0.00 0.00 0.00 2.74
2558 5958 4.411256 TTTCACGGTCCTTTCAGTTAGT 57.589 40.909 0.00 0.00 0.00 2.24
2559 5959 5.744666 TTTTTCACGGTCCTTTCAGTTAG 57.255 39.130 0.00 0.00 0.00 2.34
2579 5979 5.532557 GGTCTAGCAAACAAGCATCTTTTT 58.467 37.500 0.00 0.00 36.85 1.94
2580 5980 4.320494 CGGTCTAGCAAACAAGCATCTTTT 60.320 41.667 0.00 0.00 36.85 2.27
2581 5981 3.189287 CGGTCTAGCAAACAAGCATCTTT 59.811 43.478 0.00 0.00 36.85 2.52
2582 5982 2.744202 CGGTCTAGCAAACAAGCATCTT 59.256 45.455 0.00 0.00 36.85 2.40
2583 5983 2.350522 CGGTCTAGCAAACAAGCATCT 58.649 47.619 0.00 0.00 36.85 2.90
2584 5984 1.202076 GCGGTCTAGCAAACAAGCATC 60.202 52.381 0.00 0.00 36.85 3.91
2585 5985 0.804989 GCGGTCTAGCAAACAAGCAT 59.195 50.000 0.00 0.00 36.85 3.79
2586 5986 1.234615 GGCGGTCTAGCAAACAAGCA 61.235 55.000 0.00 0.00 39.27 3.91
2587 5987 0.955919 AGGCGGTCTAGCAAACAAGC 60.956 55.000 0.00 0.00 39.27 4.01
2588 5988 1.523758 AAGGCGGTCTAGCAAACAAG 58.476 50.000 0.00 0.00 39.27 3.16
2589 5989 1.975660 AAAGGCGGTCTAGCAAACAA 58.024 45.000 0.00 0.00 39.27 2.83
2590 5990 1.975660 AAAAGGCGGTCTAGCAAACA 58.024 45.000 0.00 0.00 39.27 2.83
2591 5991 3.365666 GGTAAAAAGGCGGTCTAGCAAAC 60.366 47.826 0.00 0.00 39.27 2.93
2592 5992 2.815503 GGTAAAAAGGCGGTCTAGCAAA 59.184 45.455 0.00 0.00 39.27 3.68
2593 5993 2.224572 TGGTAAAAAGGCGGTCTAGCAA 60.225 45.455 0.00 0.00 39.27 3.91
2594 5994 1.348366 TGGTAAAAAGGCGGTCTAGCA 59.652 47.619 0.00 0.00 39.27 3.49
2595 5995 2.103537 TGGTAAAAAGGCGGTCTAGC 57.896 50.000 0.00 0.00 0.00 3.42
2596 5996 5.441709 TTTTTGGTAAAAAGGCGGTCTAG 57.558 39.130 0.00 0.00 36.65 2.43
2597 5997 5.535406 TCATTTTTGGTAAAAAGGCGGTCTA 59.465 36.000 6.56 0.00 42.97 2.59
2598 5998 4.342665 TCATTTTTGGTAAAAAGGCGGTCT 59.657 37.500 6.56 0.00 42.97 3.85
2599 5999 4.623002 TCATTTTTGGTAAAAAGGCGGTC 58.377 39.130 6.56 0.00 42.97 4.79
2600 6000 4.674281 TCATTTTTGGTAAAAAGGCGGT 57.326 36.364 6.56 0.00 42.97 5.68
2601 6001 4.629634 GGATCATTTTTGGTAAAAAGGCGG 59.370 41.667 6.56 0.00 42.97 6.13
2602 6002 5.233988 TGGATCATTTTTGGTAAAAAGGCG 58.766 37.500 6.56 0.00 42.97 5.52
2603 6003 6.463360 TCTGGATCATTTTTGGTAAAAAGGC 58.537 36.000 6.56 0.00 42.97 4.35
2604 6004 7.489113 CGATCTGGATCATTTTTGGTAAAAAGG 59.511 37.037 10.62 5.38 41.90 3.11
2605 6005 7.489113 CCGATCTGGATCATTTTTGGTAAAAAG 59.511 37.037 10.62 0.00 41.12 2.27
2606 6006 7.039363 ACCGATCTGGATCATTTTTGGTAAAAA 60.039 33.333 10.05 2.39 41.66 1.94
2607 6007 6.435904 ACCGATCTGGATCATTTTTGGTAAAA 59.564 34.615 10.05 0.00 42.00 1.52
2608 6008 5.949354 ACCGATCTGGATCATTTTTGGTAAA 59.051 36.000 10.05 0.00 42.00 2.01
2609 6009 5.505780 ACCGATCTGGATCATTTTTGGTAA 58.494 37.500 10.05 0.00 42.00 2.85
2610 6010 5.110814 ACCGATCTGGATCATTTTTGGTA 57.889 39.130 10.05 0.00 42.00 3.25
2611 6011 3.968265 ACCGATCTGGATCATTTTTGGT 58.032 40.909 10.05 5.81 42.00 3.67
2612 6012 4.989279 AACCGATCTGGATCATTTTTGG 57.011 40.909 10.05 5.28 42.00 3.28
2613 6013 6.435430 TGTAACCGATCTGGATCATTTTTG 57.565 37.500 10.05 0.00 42.00 2.44
2614 6014 6.884295 TCTTGTAACCGATCTGGATCATTTTT 59.116 34.615 10.05 1.49 42.00 1.94
2615 6015 6.414732 TCTTGTAACCGATCTGGATCATTTT 58.585 36.000 10.05 3.48 42.00 1.82
2616 6016 5.989477 TCTTGTAACCGATCTGGATCATTT 58.011 37.500 10.05 5.50 42.00 2.32
2617 6017 5.129485 ACTCTTGTAACCGATCTGGATCATT 59.871 40.000 10.05 6.80 42.00 2.57
2618 6018 4.651503 ACTCTTGTAACCGATCTGGATCAT 59.348 41.667 10.05 0.17 42.00 2.45
2619 6019 4.023980 ACTCTTGTAACCGATCTGGATCA 58.976 43.478 10.05 4.23 42.00 2.92
2620 6020 4.657436 ACTCTTGTAACCGATCTGGATC 57.343 45.455 10.05 0.83 42.00 3.36
2621 6021 4.466370 TGAACTCTTGTAACCGATCTGGAT 59.534 41.667 10.05 1.86 42.00 3.41
2622 6022 3.830178 TGAACTCTTGTAACCGATCTGGA 59.170 43.478 10.05 0.00 42.00 3.86
2623 6023 3.927142 GTGAACTCTTGTAACCGATCTGG 59.073 47.826 2.55 2.55 46.41 3.86
2624 6024 4.810790 AGTGAACTCTTGTAACCGATCTG 58.189 43.478 0.00 0.00 0.00 2.90
2625 6025 6.585695 TTAGTGAACTCTTGTAACCGATCT 57.414 37.500 0.00 0.00 0.00 2.75
2626 6026 6.090493 GGTTTAGTGAACTCTTGTAACCGATC 59.910 42.308 0.00 0.00 38.35 3.69
2627 6027 5.930569 GGTTTAGTGAACTCTTGTAACCGAT 59.069 40.000 0.00 0.00 38.35 4.18
2628 6028 5.163426 TGGTTTAGTGAACTCTTGTAACCGA 60.163 40.000 0.00 0.00 37.25 4.69
2629 6029 5.050567 GTGGTTTAGTGAACTCTTGTAACCG 60.051 44.000 0.00 0.00 37.25 4.44
2630 6030 5.237996 GGTGGTTTAGTGAACTCTTGTAACC 59.762 44.000 0.00 0.00 38.35 2.85
2631 6031 5.818857 TGGTGGTTTAGTGAACTCTTGTAAC 59.181 40.000 0.00 0.00 38.35 2.50
2632 6032 5.818857 GTGGTGGTTTAGTGAACTCTTGTAA 59.181 40.000 0.00 0.00 38.35 2.41
2633 6033 5.362263 GTGGTGGTTTAGTGAACTCTTGTA 58.638 41.667 0.00 0.00 38.35 2.41
2634 6034 4.196971 GTGGTGGTTTAGTGAACTCTTGT 58.803 43.478 0.00 0.00 38.35 3.16
2635 6035 3.564225 GGTGGTGGTTTAGTGAACTCTTG 59.436 47.826 0.00 0.00 38.35 3.02
2636 6036 3.743269 CGGTGGTGGTTTAGTGAACTCTT 60.743 47.826 0.00 0.00 38.35 2.85
2637 6037 2.224209 CGGTGGTGGTTTAGTGAACTCT 60.224 50.000 0.00 0.00 38.35 3.24
2638 6038 2.140717 CGGTGGTGGTTTAGTGAACTC 58.859 52.381 0.00 0.00 38.35 3.01
2639 6039 1.487558 ACGGTGGTGGTTTAGTGAACT 59.512 47.619 0.00 0.00 38.35 3.01
2640 6040 1.869132 GACGGTGGTGGTTTAGTGAAC 59.131 52.381 0.00 0.00 37.53 3.18
2641 6041 1.538634 CGACGGTGGTGGTTTAGTGAA 60.539 52.381 0.00 0.00 0.00 3.18
2642 6042 0.032403 CGACGGTGGTGGTTTAGTGA 59.968 55.000 0.00 0.00 0.00 3.41
2643 6043 1.562575 GCGACGGTGGTGGTTTAGTG 61.563 60.000 0.00 0.00 0.00 2.74
2644 6044 1.301165 GCGACGGTGGTGGTTTAGT 60.301 57.895 0.00 0.00 0.00 2.24
2645 6045 0.881159 TTGCGACGGTGGTGGTTTAG 60.881 55.000 0.00 0.00 0.00 1.85
2646 6046 0.881159 CTTGCGACGGTGGTGGTTTA 60.881 55.000 0.00 0.00 0.00 2.01
2647 6047 2.124653 TTGCGACGGTGGTGGTTT 60.125 55.556 0.00 0.00 0.00 3.27
2648 6048 2.590575 CTTGCGACGGTGGTGGTT 60.591 61.111 0.00 0.00 0.00 3.67
2649 6049 3.515316 CTCTTGCGACGGTGGTGGT 62.515 63.158 0.00 0.00 0.00 4.16
2650 6050 2.738521 CTCTTGCGACGGTGGTGG 60.739 66.667 0.00 0.00 0.00 4.61
2651 6051 3.414700 GCTCTTGCGACGGTGGTG 61.415 66.667 0.00 0.00 0.00 4.17
2662 6062 1.929836 GTATGCAAGGTCTCGCTCTTG 59.070 52.381 0.00 0.00 42.19 3.02
2663 6063 1.827969 AGTATGCAAGGTCTCGCTCTT 59.172 47.619 0.00 0.00 0.00 2.85
2664 6064 1.135915 CAGTATGCAAGGTCTCGCTCT 59.864 52.381 0.00 0.00 0.00 4.09
2665 6065 1.135139 TCAGTATGCAAGGTCTCGCTC 59.865 52.381 0.00 0.00 34.76 5.03
2666 6066 1.135915 CTCAGTATGCAAGGTCTCGCT 59.864 52.381 0.00 0.00 34.76 4.93
2667 6067 1.135139 TCTCAGTATGCAAGGTCTCGC 59.865 52.381 0.00 0.00 34.76 5.03
2668 6068 3.510388 TTCTCAGTATGCAAGGTCTCG 57.490 47.619 0.00 0.00 34.76 4.04
2669 6069 4.997395 TGTTTTCTCAGTATGCAAGGTCTC 59.003 41.667 0.00 0.00 34.76 3.36
2670 6070 4.757149 GTGTTTTCTCAGTATGCAAGGTCT 59.243 41.667 0.00 0.00 34.76 3.85
2671 6071 4.515191 TGTGTTTTCTCAGTATGCAAGGTC 59.485 41.667 0.00 0.00 34.76 3.85
2672 6072 4.460263 TGTGTTTTCTCAGTATGCAAGGT 58.540 39.130 0.00 0.00 34.76 3.50
2673 6073 5.633830 ATGTGTTTTCTCAGTATGCAAGG 57.366 39.130 0.00 0.00 34.76 3.61
2674 6074 6.364165 CCAAATGTGTTTTCTCAGTATGCAAG 59.636 38.462 0.00 0.00 34.76 4.01
2675 6075 6.215121 CCAAATGTGTTTTCTCAGTATGCAA 58.785 36.000 0.00 0.00 34.76 4.08
2676 6076 5.771469 CCAAATGTGTTTTCTCAGTATGCA 58.229 37.500 0.00 0.00 34.76 3.96
2677 6077 4.622740 GCCAAATGTGTTTTCTCAGTATGC 59.377 41.667 0.00 0.00 34.76 3.14
2678 6078 4.853196 CGCCAAATGTGTTTTCTCAGTATG 59.147 41.667 0.00 0.00 37.54 2.39
2679 6079 4.615912 GCGCCAAATGTGTTTTCTCAGTAT 60.616 41.667 0.00 0.00 0.00 2.12
2680 6080 3.304391 GCGCCAAATGTGTTTTCTCAGTA 60.304 43.478 0.00 0.00 0.00 2.74
2681 6081 2.543653 GCGCCAAATGTGTTTTCTCAGT 60.544 45.455 0.00 0.00 0.00 3.41
2682 6082 2.053627 GCGCCAAATGTGTTTTCTCAG 58.946 47.619 0.00 0.00 0.00 3.35
2683 6083 1.269517 GGCGCCAAATGTGTTTTCTCA 60.270 47.619 24.80 0.00 0.00 3.27
2684 6084 1.000274 AGGCGCCAAATGTGTTTTCTC 60.000 47.619 31.54 0.00 0.00 2.87
2685 6085 1.039856 AGGCGCCAAATGTGTTTTCT 58.960 45.000 31.54 0.00 0.00 2.52
2686 6086 1.864565 AAGGCGCCAAATGTGTTTTC 58.135 45.000 31.54 0.00 0.00 2.29
2687 6087 2.323968 AAAGGCGCCAAATGTGTTTT 57.676 40.000 31.54 14.83 0.00 2.43
2688 6088 2.323968 AAAAGGCGCCAAATGTGTTT 57.676 40.000 31.54 15.63 0.00 2.83
2689 6089 2.101582 TGTAAAAGGCGCCAAATGTGTT 59.898 40.909 31.54 11.51 0.00 3.32
2690 6090 1.683917 TGTAAAAGGCGCCAAATGTGT 59.316 42.857 31.54 1.71 0.00 3.72
2691 6091 2.327568 CTGTAAAAGGCGCCAAATGTG 58.672 47.619 31.54 9.05 0.00 3.21
2692 6092 1.336795 GCTGTAAAAGGCGCCAAATGT 60.337 47.619 31.54 12.18 0.00 2.71
2693 6093 1.336702 TGCTGTAAAAGGCGCCAAATG 60.337 47.619 31.54 12.49 0.00 2.32
2694 6094 0.965439 TGCTGTAAAAGGCGCCAAAT 59.035 45.000 31.54 16.25 0.00 2.32
2695 6095 0.747255 TTGCTGTAAAAGGCGCCAAA 59.253 45.000 31.54 7.67 0.00 3.28
2696 6096 0.965439 ATTGCTGTAAAAGGCGCCAA 59.035 45.000 31.54 11.21 0.00 4.52
2697 6097 0.243365 CATTGCTGTAAAAGGCGCCA 59.757 50.000 31.54 4.11 0.00 5.69
2698 6098 0.243636 ACATTGCTGTAAAAGGCGCC 59.756 50.000 21.89 21.89 32.49 6.53
2699 6099 2.911819 TACATTGCTGTAAAAGGCGC 57.088 45.000 0.00 0.00 34.92 6.53
2700 6100 4.911610 GCATATACATTGCTGTAAAAGGCG 59.088 41.667 0.00 0.00 41.09 5.52
2711 6111 7.010460 GGAAAGGAAAACAAGCATATACATTGC 59.990 37.037 0.00 0.00 40.45 3.56
2712 6112 8.253113 AGGAAAGGAAAACAAGCATATACATTG 58.747 33.333 0.00 0.00 0.00 2.82
2713 6113 8.366359 AGGAAAGGAAAACAAGCATATACATT 57.634 30.769 0.00 0.00 0.00 2.71
2714 6114 7.961326 AGGAAAGGAAAACAAGCATATACAT 57.039 32.000 0.00 0.00 0.00 2.29
2715 6115 8.871629 TTAGGAAAGGAAAACAAGCATATACA 57.128 30.769 0.00 0.00 0.00 2.29
2760 6160 8.730680 ACGAGATGAGCACATAAACTAAAAATT 58.269 29.630 0.00 0.00 36.82 1.82
2761 6161 8.268850 ACGAGATGAGCACATAAACTAAAAAT 57.731 30.769 0.00 0.00 36.82 1.82
2762 6162 7.667043 ACGAGATGAGCACATAAACTAAAAA 57.333 32.000 0.00 0.00 36.82 1.94
2763 6163 7.667043 AACGAGATGAGCACATAAACTAAAA 57.333 32.000 0.00 0.00 36.82 1.52
2764 6164 7.667043 AAACGAGATGAGCACATAAACTAAA 57.333 32.000 0.00 0.00 36.82 1.85
2765 6165 7.667043 AAAACGAGATGAGCACATAAACTAA 57.333 32.000 0.00 0.00 36.82 2.24
2766 6166 7.667043 AAAAACGAGATGAGCACATAAACTA 57.333 32.000 0.00 0.00 36.82 2.24
2767 6167 6.560253 AAAAACGAGATGAGCACATAAACT 57.440 33.333 0.00 0.00 36.82 2.66
2790 6190 9.809096 TGATAAACAAACACATTGCTTCTAAAA 57.191 25.926 0.00 0.00 43.13 1.52
2791 6191 9.243637 GTGATAAACAAACACATTGCTTCTAAA 57.756 29.630 0.00 0.00 43.13 1.85
2792 6192 8.629158 AGTGATAAACAAACACATTGCTTCTAA 58.371 29.630 0.00 0.00 43.13 2.10
2793 6193 8.165239 AGTGATAAACAAACACATTGCTTCTA 57.835 30.769 0.00 0.00 43.13 2.10
2794 6194 7.042797 AGTGATAAACAAACACATTGCTTCT 57.957 32.000 0.00 0.00 43.13 2.85
2795 6195 7.698836 AAGTGATAAACAAACACATTGCTTC 57.301 32.000 0.00 0.00 43.13 3.86
2796 6196 8.491331 AAAAGTGATAAACAAACACATTGCTT 57.509 26.923 0.00 0.00 43.13 3.91
2797 6197 8.491331 AAAAAGTGATAAACAAACACATTGCT 57.509 26.923 0.00 0.00 43.13 3.91
2826 6226 9.019764 CAAAAGATAAACGAACACATTGAAACT 57.980 29.630 0.00 0.00 0.00 2.66
2827 6227 8.803799 ACAAAAGATAAACGAACACATTGAAAC 58.196 29.630 0.00 0.00 0.00 2.78
2828 6228 8.918961 ACAAAAGATAAACGAACACATTGAAA 57.081 26.923 0.00 0.00 0.00 2.69
2829 6229 8.918961 AACAAAAGATAAACGAACACATTGAA 57.081 26.923 0.00 0.00 0.00 2.69
2830 6230 8.918961 AAACAAAAGATAAACGAACACATTGA 57.081 26.923 0.00 0.00 0.00 2.57
2831 6231 9.965748 AAAAACAAAAGATAAACGAACACATTG 57.034 25.926 0.00 0.00 0.00 2.82
2854 6254 8.918961 ATAAACAAACACATCGTTCTCAAAAA 57.081 26.923 0.00 0.00 36.59 1.94
2855 6255 8.402472 AGATAAACAAACACATCGTTCTCAAAA 58.598 29.630 0.00 0.00 36.59 2.44
2856 6256 7.925993 AGATAAACAAACACATCGTTCTCAAA 58.074 30.769 0.00 0.00 36.59 2.69
2857 6257 7.490962 AGATAAACAAACACATCGTTCTCAA 57.509 32.000 0.00 0.00 36.59 3.02
2858 6258 8.492748 GTTAGATAAACAAACACATCGTTCTCA 58.507 33.333 0.00 0.00 36.59 3.27
2859 6259 8.492748 TGTTAGATAAACAAACACATCGTTCTC 58.507 33.333 0.00 0.00 45.11 2.87
2860 6260 8.373048 TGTTAGATAAACAAACACATCGTTCT 57.627 30.769 0.00 0.00 45.11 3.01
2877 6277 9.444600 GGAAGAACAACATTTACCTGTTAGATA 57.555 33.333 0.00 0.00 37.25 1.98
2878 6278 8.164070 AGGAAGAACAACATTTACCTGTTAGAT 58.836 33.333 0.00 0.00 37.25 1.98
2879 6279 7.514721 AGGAAGAACAACATTTACCTGTTAGA 58.485 34.615 0.00 0.00 37.25 2.10
2880 6280 7.360101 CGAGGAAGAACAACATTTACCTGTTAG 60.360 40.741 0.00 0.00 37.25 2.34
2881 6281 6.425721 CGAGGAAGAACAACATTTACCTGTTA 59.574 38.462 0.00 0.00 37.25 2.41
2882 6282 5.238650 CGAGGAAGAACAACATTTACCTGTT 59.761 40.000 0.00 0.00 39.91 3.16
2883 6283 4.755123 CGAGGAAGAACAACATTTACCTGT 59.245 41.667 0.00 0.00 0.00 4.00
2884 6284 4.994852 TCGAGGAAGAACAACATTTACCTG 59.005 41.667 0.00 0.00 0.00 4.00
2885 6285 5.223449 TCGAGGAAGAACAACATTTACCT 57.777 39.130 0.00 0.00 0.00 3.08
2886 6286 5.934935 TTCGAGGAAGAACAACATTTACC 57.065 39.130 0.00 0.00 0.00 2.85
2910 6310 9.203421 CTTTCAAAACAACAGTTACCTCTTTTT 57.797 29.630 0.00 0.00 0.00 1.94
2911 6311 8.581578 TCTTTCAAAACAACAGTTACCTCTTTT 58.418 29.630 0.00 0.00 0.00 2.27
2912 6312 8.117813 TCTTTCAAAACAACAGTTACCTCTTT 57.882 30.769 0.00 0.00 0.00 2.52
2913 6313 7.696992 TCTTTCAAAACAACAGTTACCTCTT 57.303 32.000 0.00 0.00 0.00 2.85
2914 6314 7.148069 CCTTCTTTCAAAACAACAGTTACCTCT 60.148 37.037 0.00 0.00 0.00 3.69
2915 6315 6.972901 CCTTCTTTCAAAACAACAGTTACCTC 59.027 38.462 0.00 0.00 0.00 3.85
2916 6316 6.661805 TCCTTCTTTCAAAACAACAGTTACCT 59.338 34.615 0.00 0.00 0.00 3.08
2917 6317 6.859017 TCCTTCTTTCAAAACAACAGTTACC 58.141 36.000 0.00 0.00 0.00 2.85
2918 6318 8.751302 TTTCCTTCTTTCAAAACAACAGTTAC 57.249 30.769 0.00 0.00 0.00 2.50
2919 6319 9.765795 TTTTTCCTTCTTTCAAAACAACAGTTA 57.234 25.926 0.00 0.00 0.00 2.24
2920 6320 8.556194 GTTTTTCCTTCTTTCAAAACAACAGTT 58.444 29.630 0.00 0.00 38.46 3.16
2921 6321 7.931407 AGTTTTTCCTTCTTTCAAAACAACAGT 59.069 29.630 8.59 0.00 40.21 3.55
2922 6322 8.223100 CAGTTTTTCCTTCTTTCAAAACAACAG 58.777 33.333 8.59 0.00 40.21 3.16
2923 6323 7.928706 TCAGTTTTTCCTTCTTTCAAAACAACA 59.071 29.630 8.59 0.00 40.21 3.33
2924 6324 8.221100 GTCAGTTTTTCCTTCTTTCAAAACAAC 58.779 33.333 8.59 3.74 40.21 3.32
2925 6325 7.115663 CGTCAGTTTTTCCTTCTTTCAAAACAA 59.884 33.333 8.59 0.00 40.21 2.83
2926 6326 6.584563 CGTCAGTTTTTCCTTCTTTCAAAACA 59.415 34.615 8.59 0.00 40.21 2.83
2927 6327 6.453791 GCGTCAGTTTTTCCTTCTTTCAAAAC 60.454 38.462 0.00 0.00 38.74 2.43
2928 6328 5.575218 GCGTCAGTTTTTCCTTCTTTCAAAA 59.425 36.000 0.00 0.00 0.00 2.44
2929 6329 5.099575 GCGTCAGTTTTTCCTTCTTTCAAA 58.900 37.500 0.00 0.00 0.00 2.69
2930 6330 4.398044 AGCGTCAGTTTTTCCTTCTTTCAA 59.602 37.500 0.00 0.00 0.00 2.69
2931 6331 3.945285 AGCGTCAGTTTTTCCTTCTTTCA 59.055 39.130 0.00 0.00 0.00 2.69
2932 6332 4.273724 AGAGCGTCAGTTTTTCCTTCTTTC 59.726 41.667 0.00 0.00 0.00 2.62
2933 6333 4.200092 AGAGCGTCAGTTTTTCCTTCTTT 58.800 39.130 0.00 0.00 0.00 2.52
2934 6334 3.809905 AGAGCGTCAGTTTTTCCTTCTT 58.190 40.909 0.00 0.00 0.00 2.52
2935 6335 3.477210 AGAGCGTCAGTTTTTCCTTCT 57.523 42.857 0.00 0.00 0.00 2.85
2936 6336 5.163844 GGATTAGAGCGTCAGTTTTTCCTTC 60.164 44.000 0.00 0.00 0.00 3.46
2937 6337 4.695928 GGATTAGAGCGTCAGTTTTTCCTT 59.304 41.667 0.00 0.00 0.00 3.36
2938 6338 4.254492 GGATTAGAGCGTCAGTTTTTCCT 58.746 43.478 0.00 0.00 0.00 3.36
2939 6339 4.000988 TGGATTAGAGCGTCAGTTTTTCC 58.999 43.478 0.00 0.00 0.00 3.13
2940 6340 4.691216 ACTGGATTAGAGCGTCAGTTTTTC 59.309 41.667 0.00 0.00 35.44 2.29
2941 6341 4.642429 ACTGGATTAGAGCGTCAGTTTTT 58.358 39.130 0.00 0.00 35.44 1.94
2942 6342 4.246458 GACTGGATTAGAGCGTCAGTTTT 58.754 43.478 0.00 0.00 38.60 2.43
2943 6343 3.368531 GGACTGGATTAGAGCGTCAGTTT 60.369 47.826 0.00 0.00 38.60 2.66
2944 6344 2.166664 GGACTGGATTAGAGCGTCAGTT 59.833 50.000 0.00 0.00 38.60 3.16
2945 6345 1.751924 GGACTGGATTAGAGCGTCAGT 59.248 52.381 0.00 0.00 40.82 3.41
2946 6346 2.028130 AGGACTGGATTAGAGCGTCAG 58.972 52.381 0.00 0.00 0.00 3.51
2947 6347 2.025155 GAGGACTGGATTAGAGCGTCA 58.975 52.381 0.00 0.00 0.00 4.35
2948 6348 2.034053 CAGAGGACTGGATTAGAGCGTC 59.966 54.545 0.00 0.00 40.14 5.19
2949 6349 2.028130 CAGAGGACTGGATTAGAGCGT 58.972 52.381 0.00 0.00 40.14 5.07
2950 6350 1.269517 GCAGAGGACTGGATTAGAGCG 60.270 57.143 0.00 0.00 43.62 5.03
2951 6351 2.038659 AGCAGAGGACTGGATTAGAGC 58.961 52.381 0.00 0.00 43.62 4.09
2952 6352 2.224018 GCAGCAGAGGACTGGATTAGAG 60.224 54.545 0.00 0.00 43.62 2.43
2953 6353 1.759445 GCAGCAGAGGACTGGATTAGA 59.241 52.381 0.00 0.00 43.62 2.10
2954 6354 1.537776 CGCAGCAGAGGACTGGATTAG 60.538 57.143 0.00 0.00 43.62 1.73
2955 6355 0.461548 CGCAGCAGAGGACTGGATTA 59.538 55.000 0.00 0.00 43.62 1.75
2956 6356 1.220206 CGCAGCAGAGGACTGGATT 59.780 57.895 0.00 0.00 43.62 3.01
2957 6357 2.898738 CGCAGCAGAGGACTGGAT 59.101 61.111 0.00 0.00 43.62 3.41
2970 6370 4.184629 AGTTCTCCTGTTATTTAGCGCAG 58.815 43.478 11.47 0.00 0.00 5.18
2971 6371 4.181578 GAGTTCTCCTGTTATTTAGCGCA 58.818 43.478 11.47 0.00 0.00 6.09
2972 6372 3.556365 GGAGTTCTCCTGTTATTTAGCGC 59.444 47.826 11.20 0.00 0.00 5.92
2973 6373 4.120589 GGGAGTTCTCCTGTTATTTAGCG 58.879 47.826 16.95 0.00 0.00 4.26
2974 6374 4.452825 GGGGAGTTCTCCTGTTATTTAGC 58.547 47.826 16.95 0.00 0.00 3.09
2975 6375 4.443034 CGGGGGAGTTCTCCTGTTATTTAG 60.443 50.000 16.95 0.00 0.00 1.85
2976 6376 3.453353 CGGGGGAGTTCTCCTGTTATTTA 59.547 47.826 16.95 0.00 0.00 1.40
2977 6377 2.238898 CGGGGGAGTTCTCCTGTTATTT 59.761 50.000 16.95 0.00 0.00 1.40
2978 6378 1.838077 CGGGGGAGTTCTCCTGTTATT 59.162 52.381 16.95 0.00 0.00 1.40
2979 6379 1.497161 CGGGGGAGTTCTCCTGTTAT 58.503 55.000 16.95 0.00 0.00 1.89
2980 6380 1.262640 GCGGGGGAGTTCTCCTGTTA 61.263 60.000 16.95 0.00 0.00 2.41
2981 6381 2.593956 GCGGGGGAGTTCTCCTGTT 61.594 63.158 16.95 0.00 0.00 3.16
2982 6382 3.003763 GCGGGGGAGTTCTCCTGT 61.004 66.667 16.95 0.00 0.00 4.00
2983 6383 1.048724 TATGCGGGGGAGTTCTCCTG 61.049 60.000 16.95 8.25 0.00 3.86
2984 6384 0.326238 TTATGCGGGGGAGTTCTCCT 60.326 55.000 16.95 0.89 0.00 3.69
2985 6385 0.544697 TTTATGCGGGGGAGTTCTCC 59.455 55.000 10.13 10.13 0.00 3.71
2986 6386 2.413310 TTTTATGCGGGGGAGTTCTC 57.587 50.000 0.00 0.00 0.00 2.87
2987 6387 2.891191 TTTTTATGCGGGGGAGTTCT 57.109 45.000 0.00 0.00 0.00 3.01
3043 6443 8.749354 AGAGCTTCTTTCCTTTTTACTCAAAAA 58.251 29.630 0.00 0.00 40.47 1.94
3044 6444 8.190784 CAGAGCTTCTTTCCTTTTTACTCAAAA 58.809 33.333 0.00 0.00 33.12 2.44
3045 6445 7.556275 TCAGAGCTTCTTTCCTTTTTACTCAAA 59.444 33.333 0.00 0.00 0.00 2.69
3046 6446 7.054124 TCAGAGCTTCTTTCCTTTTTACTCAA 58.946 34.615 0.00 0.00 0.00 3.02
3047 6447 6.591935 TCAGAGCTTCTTTCCTTTTTACTCA 58.408 36.000 0.00 0.00 0.00 3.41
3048 6448 7.148323 GGATCAGAGCTTCTTTCCTTTTTACTC 60.148 40.741 0.00 0.00 0.00 2.59
3049 6449 6.657117 GGATCAGAGCTTCTTTCCTTTTTACT 59.343 38.462 0.00 0.00 0.00 2.24
3050 6450 6.431234 TGGATCAGAGCTTCTTTCCTTTTTAC 59.569 38.462 0.00 0.00 31.00 2.01
3051 6451 6.542821 TGGATCAGAGCTTCTTTCCTTTTTA 58.457 36.000 0.00 0.00 31.00 1.52
3052 6452 5.388654 TGGATCAGAGCTTCTTTCCTTTTT 58.611 37.500 0.00 0.00 31.00 1.94
3053 6453 4.990526 TGGATCAGAGCTTCTTTCCTTTT 58.009 39.130 0.00 0.00 31.00 2.27
3054 6454 4.042684 ACTGGATCAGAGCTTCTTTCCTTT 59.957 41.667 1.59 0.00 35.18 3.11
3055 6455 3.586618 ACTGGATCAGAGCTTCTTTCCTT 59.413 43.478 1.59 0.00 35.18 3.36
3056 6456 3.180507 ACTGGATCAGAGCTTCTTTCCT 58.819 45.455 1.59 0.00 35.18 3.36
3057 6457 3.530535 GACTGGATCAGAGCTTCTTTCC 58.469 50.000 1.59 0.00 35.18 3.13
3058 6458 3.197549 AGGACTGGATCAGAGCTTCTTTC 59.802 47.826 1.59 0.00 35.18 2.62
3059 6459 3.180507 AGGACTGGATCAGAGCTTCTTT 58.819 45.455 1.59 0.00 35.18 2.52
3060 6460 2.765699 GAGGACTGGATCAGAGCTTCTT 59.234 50.000 1.59 0.00 35.18 2.52
3061 6461 2.024080 AGAGGACTGGATCAGAGCTTCT 60.024 50.000 1.59 2.57 35.18 2.85
3062 6462 2.387757 AGAGGACTGGATCAGAGCTTC 58.612 52.381 1.59 0.52 35.18 3.86
3063 6463 2.548464 AGAGGACTGGATCAGAGCTT 57.452 50.000 1.59 0.00 35.18 3.74
3064 6464 2.513738 AGTAGAGGACTGGATCAGAGCT 59.486 50.000 1.59 0.00 36.87 4.09
3065 6465 2.944129 AGTAGAGGACTGGATCAGAGC 58.056 52.381 1.59 0.00 36.87 4.09
3066 6466 4.104102 AGGTAGTAGAGGACTGGATCAGAG 59.896 50.000 1.59 0.00 39.39 3.35
3067 6467 4.048600 AGGTAGTAGAGGACTGGATCAGA 58.951 47.826 1.59 0.00 39.39 3.27
3068 6468 4.447138 AGGTAGTAGAGGACTGGATCAG 57.553 50.000 0.00 0.00 39.39 2.90
3069 6469 7.832473 ATATAGGTAGTAGAGGACTGGATCA 57.168 40.000 0.00 0.00 39.39 2.92
3070 6470 7.558444 CCAATATAGGTAGTAGAGGACTGGATC 59.442 44.444 0.00 0.00 39.39 3.36
3071 6471 7.415086 CCAATATAGGTAGTAGAGGACTGGAT 58.585 42.308 0.00 0.00 39.39 3.41
3072 6472 6.240497 CCCAATATAGGTAGTAGAGGACTGGA 60.240 46.154 0.00 0.00 39.39 3.86
3073 6473 5.952947 CCCAATATAGGTAGTAGAGGACTGG 59.047 48.000 0.00 0.00 39.39 4.00
3074 6474 5.419471 GCCCAATATAGGTAGTAGAGGACTG 59.581 48.000 0.00 0.00 39.39 3.51
3075 6475 5.518725 GGCCCAATATAGGTAGTAGAGGACT 60.519 48.000 0.00 0.00 42.69 3.85
3076 6476 4.710865 GGCCCAATATAGGTAGTAGAGGAC 59.289 50.000 0.00 0.00 0.00 3.85
3077 6477 4.358918 TGGCCCAATATAGGTAGTAGAGGA 59.641 45.833 0.00 0.00 0.00 3.71
3078 6478 4.684724 TGGCCCAATATAGGTAGTAGAGG 58.315 47.826 0.00 0.00 0.00 3.69
3079 6479 4.712337 CCTGGCCCAATATAGGTAGTAGAG 59.288 50.000 0.00 0.00 0.00 2.43
3080 6480 4.684724 CCTGGCCCAATATAGGTAGTAGA 58.315 47.826 0.00 0.00 0.00 2.59
3081 6481 3.197983 GCCTGGCCCAATATAGGTAGTAG 59.802 52.174 7.66 0.00 32.85 2.57
3082 6482 3.178865 GCCTGGCCCAATATAGGTAGTA 58.821 50.000 7.66 0.00 32.85 1.82
3083 6483 1.985895 GCCTGGCCCAATATAGGTAGT 59.014 52.381 7.66 0.00 32.85 2.73
3084 6484 1.282157 GGCCTGGCCCAATATAGGTAG 59.718 57.143 27.77 0.00 44.06 3.18
3085 6485 1.368374 GGCCTGGCCCAATATAGGTA 58.632 55.000 27.77 0.00 44.06 3.08
3086 6486 2.164393 GGCCTGGCCCAATATAGGT 58.836 57.895 27.77 0.00 44.06 3.08
3097 6497 1.598130 CGCTTATACTGGGCCTGGC 60.598 63.158 11.05 11.05 0.00 4.85
3098 6498 1.071471 CCGCTTATACTGGGCCTGG 59.929 63.158 15.36 5.47 0.00 4.45
3099 6499 1.598130 GCCGCTTATACTGGGCCTG 60.598 63.158 9.11 9.11 39.67 4.85
3100 6500 1.632018 TTGCCGCTTATACTGGGCCT 61.632 55.000 4.53 0.00 44.96 5.19
3101 6501 0.750182 TTTGCCGCTTATACTGGGCC 60.750 55.000 0.00 0.00 44.96 5.80
3102 6502 1.099689 TTTTGCCGCTTATACTGGGC 58.900 50.000 0.00 0.00 45.76 5.36
3103 6503 2.099098 CCTTTTTGCCGCTTATACTGGG 59.901 50.000 0.00 0.00 0.00 4.45
3104 6504 3.013921 TCCTTTTTGCCGCTTATACTGG 58.986 45.455 0.00 0.00 0.00 4.00
3105 6505 4.900635 ATCCTTTTTGCCGCTTATACTG 57.099 40.909 0.00 0.00 0.00 2.74
3106 6506 4.035208 CGAATCCTTTTTGCCGCTTATACT 59.965 41.667 0.00 0.00 0.00 2.12
3107 6507 4.279659 CGAATCCTTTTTGCCGCTTATAC 58.720 43.478 0.00 0.00 0.00 1.47
3108 6508 3.242936 GCGAATCCTTTTTGCCGCTTATA 60.243 43.478 0.00 0.00 39.57 0.98
3109 6509 2.479560 GCGAATCCTTTTTGCCGCTTAT 60.480 45.455 0.00 0.00 39.57 1.73
3110 6510 1.135517 GCGAATCCTTTTTGCCGCTTA 60.136 47.619 0.00 0.00 39.57 3.09
3111 6511 0.388520 GCGAATCCTTTTTGCCGCTT 60.389 50.000 0.00 0.00 39.57 4.68
3112 6512 1.212751 GCGAATCCTTTTTGCCGCT 59.787 52.632 0.00 0.00 39.57 5.52
3113 6513 0.665972 TTGCGAATCCTTTTTGCCGC 60.666 50.000 0.00 0.00 42.52 6.53
3114 6514 1.059942 GTTGCGAATCCTTTTTGCCG 58.940 50.000 0.00 0.00 0.00 5.69
3115 6515 2.061028 CTGTTGCGAATCCTTTTTGCC 58.939 47.619 0.00 0.00 0.00 4.52
3116 6516 2.742774 ACTGTTGCGAATCCTTTTTGC 58.257 42.857 0.00 0.00 0.00 3.68
3117 6517 5.147162 GTCTACTGTTGCGAATCCTTTTTG 58.853 41.667 0.00 0.00 0.00 2.44
3118 6518 4.215613 GGTCTACTGTTGCGAATCCTTTTT 59.784 41.667 0.00 0.00 0.00 1.94
3119 6519 3.751698 GGTCTACTGTTGCGAATCCTTTT 59.248 43.478 0.00 0.00 0.00 2.27
3120 6520 3.244422 TGGTCTACTGTTGCGAATCCTTT 60.244 43.478 0.00 0.00 0.00 3.11
3121 6521 2.301870 TGGTCTACTGTTGCGAATCCTT 59.698 45.455 0.00 0.00 0.00 3.36
3122 6522 1.899814 TGGTCTACTGTTGCGAATCCT 59.100 47.619 0.00 0.00 0.00 3.24
3123 6523 2.380084 TGGTCTACTGTTGCGAATCC 57.620 50.000 0.00 0.00 0.00 3.01
3124 6524 2.094417 GCTTGGTCTACTGTTGCGAATC 59.906 50.000 0.00 0.00 0.00 2.52
3125 6525 2.076863 GCTTGGTCTACTGTTGCGAAT 58.923 47.619 0.00 0.00 0.00 3.34
3126 6526 1.202592 TGCTTGGTCTACTGTTGCGAA 60.203 47.619 0.00 0.00 0.00 4.70
3127 6527 0.391228 TGCTTGGTCTACTGTTGCGA 59.609 50.000 0.00 0.00 0.00 5.10
3128 6528 0.792640 CTGCTTGGTCTACTGTTGCG 59.207 55.000 0.00 0.00 0.00 4.85
3129 6529 2.072298 CTCTGCTTGGTCTACTGTTGC 58.928 52.381 0.00 0.00 0.00 4.17
3130 6530 2.072298 GCTCTGCTTGGTCTACTGTTG 58.928 52.381 0.00 0.00 0.00 3.33
3131 6531 1.002544 GGCTCTGCTTGGTCTACTGTT 59.997 52.381 0.00 0.00 0.00 3.16
3132 6532 0.610687 GGCTCTGCTTGGTCTACTGT 59.389 55.000 0.00 0.00 0.00 3.55
3133 6533 0.610174 TGGCTCTGCTTGGTCTACTG 59.390 55.000 0.00 0.00 0.00 2.74
3134 6534 0.901124 CTGGCTCTGCTTGGTCTACT 59.099 55.000 0.00 0.00 0.00 2.57
3135 6535 0.742635 GCTGGCTCTGCTTGGTCTAC 60.743 60.000 0.00 0.00 0.00 2.59
3136 6536 1.194121 TGCTGGCTCTGCTTGGTCTA 61.194 55.000 5.84 0.00 0.00 2.59
3137 6537 2.060567 TTGCTGGCTCTGCTTGGTCT 62.061 55.000 5.84 0.00 0.00 3.85
3138 6538 1.584380 CTTGCTGGCTCTGCTTGGTC 61.584 60.000 5.84 0.00 0.00 4.02
3139 6539 1.602888 CTTGCTGGCTCTGCTTGGT 60.603 57.895 5.84 0.00 0.00 3.67
3140 6540 2.991076 GCTTGCTGGCTCTGCTTGG 61.991 63.158 5.84 0.00 0.00 3.61
3141 6541 1.972223 AGCTTGCTGGCTCTGCTTG 60.972 57.895 0.00 1.33 38.24 4.01
3142 6542 1.972223 CAGCTTGCTGGCTCTGCTT 60.972 57.895 14.25 0.00 41.00 3.91
3143 6543 2.360100 CAGCTTGCTGGCTCTGCT 60.360 61.111 14.25 0.00 41.00 4.24
3144 6544 4.117661 GCAGCTTGCTGGCTCTGC 62.118 66.667 21.98 14.68 43.95 4.26
3145 6545 2.671963 TGCAGCTTGCTGGCTCTG 60.672 61.111 21.98 0.00 45.31 3.35
3146 6546 1.834856 TAGTGCAGCTTGCTGGCTCT 61.835 55.000 21.98 19.52 45.31 4.09
3147 6547 0.957395 TTAGTGCAGCTTGCTGGCTC 60.957 55.000 21.98 14.76 45.31 4.70
3148 6548 1.073722 TTAGTGCAGCTTGCTGGCT 59.926 52.632 21.98 7.85 45.31 4.75
3149 6549 1.211190 GTTAGTGCAGCTTGCTGGC 59.789 57.895 21.98 14.97 45.31 4.85
3150 6550 1.242076 AAGTTAGTGCAGCTTGCTGG 58.758 50.000 21.98 6.28 45.31 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.