Multiple sequence alignment - TraesCS7A01G217000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G217000 chr7A 100.000 2336 0 0 1 2336 183649597 183651932 0.000000e+00 4314.0
1 TraesCS7A01G217000 chr7A 95.282 1293 58 3 73 1362 42531881 42533173 0.000000e+00 2047.0
2 TraesCS7A01G217000 chr7A 92.157 357 25 2 1009 1362 40133086 40132730 3.470000e-138 501.0
3 TraesCS7A01G217000 chr7A 92.857 56 4 0 1996 2051 666152320 666152375 5.350000e-12 82.4
4 TraesCS7A01G217000 chr7A 100.000 42 0 0 2035 2076 183711444 183711485 6.920000e-11 78.7
5 TraesCS7A01G217000 chr7A 100.000 32 0 0 2005 2036 42500779 42500748 2.510000e-05 60.2
6 TraesCS7A01G217000 chr3D 95.039 1290 57 6 77 1362 535911177 535909891 0.000000e+00 2021.0
7 TraesCS7A01G217000 chr2B 91.898 1296 82 12 74 1362 723313378 723312099 0.000000e+00 1790.0
8 TraesCS7A01G217000 chr2D 92.924 1173 59 6 195 1362 324906269 324907422 0.000000e+00 1685.0
9 TraesCS7A01G217000 chr2D 96.032 126 5 0 74 199 324890123 324890248 3.040000e-49 206.0
10 TraesCS7A01G217000 chr2A 88.829 1289 125 9 77 1362 74270786 74269514 0.000000e+00 1565.0
11 TraesCS7A01G217000 chr1A 87.521 1170 126 9 194 1353 558942532 558941373 0.000000e+00 1334.0
12 TraesCS7A01G217000 chr1A 94.521 73 2 2 130 201 558942721 558942650 6.820000e-21 111.0
13 TraesCS7A01G217000 chr6A 94.737 798 40 2 207 1002 75990198 75989401 0.000000e+00 1240.0
14 TraesCS7A01G217000 chr6A 91.803 366 27 3 1000 1362 75952062 75951697 7.450000e-140 507.0
15 TraesCS7A01G217000 chr1B 88.399 1043 101 11 326 1353 643457033 643455996 0.000000e+00 1238.0
16 TraesCS7A01G217000 chr6B 92.182 857 61 5 513 1363 135355071 135355927 0.000000e+00 1206.0
17 TraesCS7A01G217000 chr6B 91.813 342 25 3 127 468 135354742 135355080 7.550000e-130 473.0
18 TraesCS7A01G217000 chr3A 89.091 605 60 5 762 1362 333215136 333214534 0.000000e+00 747.0
19 TraesCS7A01G217000 chr3A 92.683 41 3 0 1996 2036 594490424 594490384 2.510000e-05 60.2
20 TraesCS7A01G217000 chr3A 100.000 32 0 0 2000 2031 644918406 644918437 2.510000e-05 60.2
21 TraesCS7A01G217000 chr1D 92.090 354 28 0 323 676 466973322 466972969 1.250000e-137 499.0
22 TraesCS7A01G217000 chr1D 97.143 35 0 1 2002 2036 476441673 476441640 9.020000e-05 58.4
23 TraesCS7A01G217000 chr7D 89.329 328 30 3 1039 1362 191490670 191490996 7.770000e-110 407.0
24 TraesCS7A01G217000 chr7D 91.593 226 17 2 1405 1629 179120017 179120241 6.270000e-81 311.0
25 TraesCS7A01G217000 chr7D 98.529 68 0 1 2035 2101 179182191 179182258 4.080000e-23 119.0
26 TraesCS7A01G217000 chr7D 94.340 53 1 2 2161 2213 179182931 179182981 1.920000e-11 80.5
27 TraesCS7A01G217000 chr7D 100.000 30 0 0 14 43 193204070 193204041 3.240000e-04 56.5
28 TraesCS7A01G217000 chr7B 86.351 359 20 5 1996 2327 145049381 145049737 4.740000e-97 364.0
29 TraesCS7A01G217000 chr7B 92.276 246 7 2 1742 1987 145049108 145049341 2.880000e-89 339.0
30 TraesCS7A01G217000 chr7B 100.000 67 0 0 2035 2101 145370820 145370886 8.760000e-25 124.0
31 TraesCS7A01G217000 chr7B 94.872 39 2 0 2000 2038 137526360 137526322 6.970000e-06 62.1
32 TraesCS7A01G217000 chr7B 100.000 30 0 0 14 43 156632327 156632298 3.240000e-04 56.5
33 TraesCS7A01G217000 chr5A 91.489 47 3 1 1992 2038 24432000 24432045 1.940000e-06 63.9
34 TraesCS7A01G217000 chr4A 97.059 34 1 0 2003 2036 683870354 683870321 9.020000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G217000 chr7A 183649597 183651932 2335 False 4314.0 4314 100.0000 1 2336 1 chr7A.!!$F2 2335
1 TraesCS7A01G217000 chr7A 42531881 42533173 1292 False 2047.0 2047 95.2820 73 1362 1 chr7A.!!$F1 1289
2 TraesCS7A01G217000 chr3D 535909891 535911177 1286 True 2021.0 2021 95.0390 77 1362 1 chr3D.!!$R1 1285
3 TraesCS7A01G217000 chr2B 723312099 723313378 1279 True 1790.0 1790 91.8980 74 1362 1 chr2B.!!$R1 1288
4 TraesCS7A01G217000 chr2D 324906269 324907422 1153 False 1685.0 1685 92.9240 195 1362 1 chr2D.!!$F2 1167
5 TraesCS7A01G217000 chr2A 74269514 74270786 1272 True 1565.0 1565 88.8290 77 1362 1 chr2A.!!$R1 1285
6 TraesCS7A01G217000 chr1A 558941373 558942721 1348 True 722.5 1334 91.0210 130 1353 2 chr1A.!!$R1 1223
7 TraesCS7A01G217000 chr6A 75989401 75990198 797 True 1240.0 1240 94.7370 207 1002 1 chr6A.!!$R2 795
8 TraesCS7A01G217000 chr1B 643455996 643457033 1037 True 1238.0 1238 88.3990 326 1353 1 chr1B.!!$R1 1027
9 TraesCS7A01G217000 chr6B 135354742 135355927 1185 False 839.5 1206 91.9975 127 1363 2 chr6B.!!$F1 1236
10 TraesCS7A01G217000 chr3A 333214534 333215136 602 True 747.0 747 89.0910 762 1362 1 chr3A.!!$R1 600
11 TraesCS7A01G217000 chr7B 145049108 145049737 629 False 351.5 364 89.3135 1742 2327 2 chr7B.!!$F2 585

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
242 368 0.314935 CGGCAGATTTTGTGGCTTGT 59.685 50.0 0.0 0.0 38.31 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1521 1674 0.036765 GTCATCGTGTACCCTTGGCA 60.037 55.0 0.0 0.0 0.0 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.982516 TGATGCCTCTACTCAGGTTAGT 58.017 45.455 0.00 0.00 35.72 2.24
22 23 5.125367 TGATGCCTCTACTCAGGTTAGTA 57.875 43.478 0.00 0.00 35.72 1.82
23 24 5.706447 TGATGCCTCTACTCAGGTTAGTAT 58.294 41.667 0.00 0.00 35.72 2.12
24 25 5.536538 TGATGCCTCTACTCAGGTTAGTATG 59.463 44.000 0.00 0.00 35.72 2.39
25 26 5.125367 TGCCTCTACTCAGGTTAGTATGA 57.875 43.478 0.00 0.00 35.72 2.15
26 27 5.706447 TGCCTCTACTCAGGTTAGTATGAT 58.294 41.667 0.00 0.00 35.72 2.45
27 28 6.849151 TGCCTCTACTCAGGTTAGTATGATA 58.151 40.000 0.00 0.00 35.72 2.15
28 29 6.943146 TGCCTCTACTCAGGTTAGTATGATAG 59.057 42.308 0.00 0.00 35.72 2.08
29 30 6.376018 GCCTCTACTCAGGTTAGTATGATAGG 59.624 46.154 0.00 0.00 35.72 2.57
30 31 7.691213 CCTCTACTCAGGTTAGTATGATAGGA 58.309 42.308 0.00 0.00 31.70 2.94
31 32 7.827236 CCTCTACTCAGGTTAGTATGATAGGAG 59.173 44.444 0.00 0.00 31.70 3.69
32 33 8.507582 TCTACTCAGGTTAGTATGATAGGAGA 57.492 38.462 0.00 0.00 31.70 3.71
33 34 8.598916 TCTACTCAGGTTAGTATGATAGGAGAG 58.401 40.741 0.00 0.00 31.70 3.20
34 35 7.395525 ACTCAGGTTAGTATGATAGGAGAGA 57.604 40.000 0.00 0.00 0.00 3.10
35 36 7.228590 ACTCAGGTTAGTATGATAGGAGAGAC 58.771 42.308 0.00 0.00 0.00 3.36
36 37 6.544650 TCAGGTTAGTATGATAGGAGAGACC 58.455 44.000 0.00 0.00 39.35 3.85
37 38 6.102762 TCAGGTTAGTATGATAGGAGAGACCA 59.897 42.308 0.00 0.00 42.04 4.02
38 39 6.778069 CAGGTTAGTATGATAGGAGAGACCAA 59.222 42.308 0.00 0.00 42.04 3.67
39 40 7.453126 CAGGTTAGTATGATAGGAGAGACCAAT 59.547 40.741 0.00 0.00 42.04 3.16
40 41 8.679725 AGGTTAGTATGATAGGAGAGACCAATA 58.320 37.037 0.00 0.00 42.04 1.90
41 42 9.310449 GGTTAGTATGATAGGAGAGACCAATAA 57.690 37.037 0.00 0.00 42.04 1.40
46 47 8.979574 GTATGATAGGAGAGACCAATAAAAACG 58.020 37.037 0.00 0.00 42.04 3.60
47 48 6.942976 TGATAGGAGAGACCAATAAAAACGT 58.057 36.000 0.00 0.00 42.04 3.99
48 49 8.070034 TGATAGGAGAGACCAATAAAAACGTA 57.930 34.615 0.00 0.00 42.04 3.57
49 50 7.977853 TGATAGGAGAGACCAATAAAAACGTAC 59.022 37.037 0.00 0.00 42.04 3.67
50 51 6.105397 AGGAGAGACCAATAAAAACGTACA 57.895 37.500 0.00 0.00 42.04 2.90
51 52 6.527423 AGGAGAGACCAATAAAAACGTACAA 58.473 36.000 0.00 0.00 42.04 2.41
52 53 6.426025 AGGAGAGACCAATAAAAACGTACAAC 59.574 38.462 0.00 0.00 42.04 3.32
53 54 6.426025 GGAGAGACCAATAAAAACGTACAACT 59.574 38.462 0.00 0.00 38.79 3.16
54 55 7.599998 GGAGAGACCAATAAAAACGTACAACTA 59.400 37.037 0.00 0.00 38.79 2.24
55 56 8.302965 AGAGACCAATAAAAACGTACAACTAC 57.697 34.615 0.00 0.00 0.00 2.73
56 57 8.146412 AGAGACCAATAAAAACGTACAACTACT 58.854 33.333 0.00 0.00 0.00 2.57
57 58 8.302965 AGACCAATAAAAACGTACAACTACTC 57.697 34.615 0.00 0.00 0.00 2.59
58 59 7.927629 AGACCAATAAAAACGTACAACTACTCA 59.072 33.333 0.00 0.00 0.00 3.41
59 60 8.436046 ACCAATAAAAACGTACAACTACTCAA 57.564 30.769 0.00 0.00 0.00 3.02
60 61 8.553696 ACCAATAAAAACGTACAACTACTCAAG 58.446 33.333 0.00 0.00 0.00 3.02
61 62 8.767085 CCAATAAAAACGTACAACTACTCAAGA 58.233 33.333 0.00 0.00 0.00 3.02
64 65 9.701098 ATAAAAACGTACAACTACTCAAGATGA 57.299 29.630 0.00 0.00 32.52 2.92
65 66 7.404139 AAAACGTACAACTACTCAAGATGAC 57.596 36.000 0.00 0.00 32.52 3.06
66 67 4.720090 ACGTACAACTACTCAAGATGACG 58.280 43.478 0.00 0.00 37.45 4.35
67 68 4.214971 ACGTACAACTACTCAAGATGACGT 59.785 41.667 0.00 0.00 38.55 4.34
68 69 4.787083 CGTACAACTACTCAAGATGACGTC 59.213 45.833 9.11 9.11 32.38 4.34
69 70 4.848562 ACAACTACTCAAGATGACGTCA 57.151 40.909 22.48 22.48 32.52 4.35
70 71 5.196341 ACAACTACTCAAGATGACGTCAA 57.804 39.130 24.13 4.31 32.52 3.18
71 72 5.597806 ACAACTACTCAAGATGACGTCAAA 58.402 37.500 24.13 0.00 32.52 2.69
175 176 5.925509 ACTAGTTGAGTAGACTTTTTGGCA 58.074 37.500 0.00 0.00 36.27 4.92
223 349 8.470657 TCTATCCTGCTACCATCATATGATAC 57.529 38.462 17.77 6.43 32.63 2.24
242 368 0.314935 CGGCAGATTTTGTGGCTTGT 59.685 50.000 0.00 0.00 38.31 3.16
284 410 1.838112 TCTCGGTTAGGTCGGCTTAA 58.162 50.000 0.00 0.00 0.00 1.85
354 483 4.689345 GTCCTAGTGCGGCGAATATAAATT 59.311 41.667 12.98 0.00 0.00 1.82
380 509 6.872585 ATATGGGATGTTGTGTGGAAATTT 57.127 33.333 0.00 0.00 0.00 1.82
508 639 1.300971 GCATGCGAGTTGCCTGAGAA 61.301 55.000 11.48 0.00 45.60 2.87
551 683 5.705441 CCAATGTTAGAAAGCAAGACAGGTA 59.295 40.000 0.00 0.00 0.00 3.08
585 717 3.562176 GGGGTTGGAAGATGTCATTGAGT 60.562 47.826 0.00 0.00 0.00 3.41
854 990 2.390225 AGGATTCTATGGACTCGCCT 57.610 50.000 0.00 0.00 37.63 5.52
1046 1196 1.425066 TGGTCTGAATCTTGCCCAGTT 59.575 47.619 0.00 0.00 0.00 3.16
1127 1277 5.046376 TGCAAGATGATGGTACTTTCTCAGA 60.046 40.000 0.00 0.00 0.00 3.27
1136 1286 4.202461 TGGTACTTTCTCAGAATTGGCTGT 60.202 41.667 0.00 0.00 37.20 4.40
1171 1321 3.622612 CGATTGTTATCACATGGCTCACA 59.377 43.478 0.00 0.00 31.06 3.58
1228 1379 5.880332 AGAGAAGGAAATTTTGTAGCGCATA 59.120 36.000 11.47 0.00 0.00 3.14
1243 1394 1.663695 GCATAAACTGGCGAGGCTTA 58.336 50.000 0.00 0.00 0.00 3.09
1387 1540 4.593157 TGAATCGAAAAACGTTCAACAGG 58.407 39.130 0.00 0.00 43.13 4.00
1388 1541 4.333095 TGAATCGAAAAACGTTCAACAGGA 59.667 37.500 0.00 0.00 43.13 3.86
1389 1542 4.886247 ATCGAAAAACGTTCAACAGGAA 57.114 36.364 0.00 0.00 43.13 3.36
1390 1543 4.886247 TCGAAAAACGTTCAACAGGAAT 57.114 36.364 0.00 0.00 43.13 3.01
1391 1544 4.593157 TCGAAAAACGTTCAACAGGAATG 58.407 39.130 0.00 0.00 46.05 2.67
1392 1545 3.728718 CGAAAAACGTTCAACAGGAATGG 59.271 43.478 0.00 0.00 45.10 3.16
1393 1546 2.793278 AAACGTTCAACAGGAATGGC 57.207 45.000 0.00 0.00 45.10 4.40
1394 1547 0.958822 AACGTTCAACAGGAATGGCC 59.041 50.000 0.00 0.00 45.10 5.36
1395 1548 0.893727 ACGTTCAACAGGAATGGCCC 60.894 55.000 0.00 0.00 45.10 5.80
1396 1549 1.883021 GTTCAACAGGAATGGCCCG 59.117 57.895 0.00 0.00 37.93 6.13
1397 1550 0.608035 GTTCAACAGGAATGGCCCGA 60.608 55.000 0.00 0.00 37.93 5.14
1398 1551 0.608035 TTCAACAGGAATGGCCCGAC 60.608 55.000 0.00 0.00 37.37 4.79
1399 1552 1.002134 CAACAGGAATGGCCCGACT 60.002 57.895 0.00 0.00 37.37 4.18
1400 1553 1.026718 CAACAGGAATGGCCCGACTC 61.027 60.000 0.00 0.00 37.37 3.36
1401 1554 1.201429 AACAGGAATGGCCCGACTCT 61.201 55.000 0.00 0.00 37.37 3.24
1402 1555 1.144936 CAGGAATGGCCCGACTCTC 59.855 63.158 0.00 0.00 37.37 3.20
1403 1556 1.002274 AGGAATGGCCCGACTCTCT 59.998 57.895 0.00 0.00 37.37 3.10
1404 1557 1.144936 GGAATGGCCCGACTCTCTG 59.855 63.158 0.00 0.00 0.00 3.35
1405 1558 1.144936 GAATGGCCCGACTCTCTGG 59.855 63.158 0.00 0.00 0.00 3.86
1406 1559 1.613630 AATGGCCCGACTCTCTGGT 60.614 57.895 0.00 0.00 0.00 4.00
1407 1560 1.201429 AATGGCCCGACTCTCTGGTT 61.201 55.000 0.00 0.00 0.00 3.67
1408 1561 1.617947 ATGGCCCGACTCTCTGGTTC 61.618 60.000 0.00 0.00 0.00 3.62
1409 1562 2.283529 GGCCCGACTCTCTGGTTCA 61.284 63.158 0.00 0.00 0.00 3.18
1410 1563 1.671742 GCCCGACTCTCTGGTTCAA 59.328 57.895 0.00 0.00 0.00 2.69
1411 1564 0.670854 GCCCGACTCTCTGGTTCAAC 60.671 60.000 0.00 0.00 0.00 3.18
1412 1565 0.679505 CCCGACTCTCTGGTTCAACA 59.320 55.000 0.00 0.00 0.00 3.33
1413 1566 1.605712 CCCGACTCTCTGGTTCAACAC 60.606 57.143 0.00 0.00 0.00 3.32
1414 1567 1.341531 CCGACTCTCTGGTTCAACACT 59.658 52.381 0.00 0.00 0.00 3.55
1415 1568 2.608261 CCGACTCTCTGGTTCAACACTC 60.608 54.545 0.00 0.00 0.00 3.51
1416 1569 2.667137 GACTCTCTGGTTCAACACTCG 58.333 52.381 0.00 0.00 0.00 4.18
1417 1570 2.032620 ACTCTCTGGTTCAACACTCGT 58.967 47.619 0.00 0.00 0.00 4.18
1418 1571 2.223829 ACTCTCTGGTTCAACACTCGTG 60.224 50.000 0.00 0.00 0.00 4.35
1419 1572 1.068588 TCTCTGGTTCAACACTCGTGG 59.931 52.381 1.77 0.00 34.19 4.94
1420 1573 0.828022 TCTGGTTCAACACTCGTGGT 59.172 50.000 1.77 0.00 34.19 4.16
1430 1583 3.423344 ACTCGTGGTGACTCTGAGT 57.577 52.632 10.66 10.66 34.94 3.41
1431 1584 1.693627 ACTCGTGGTGACTCTGAGTT 58.306 50.000 12.27 0.00 35.66 3.01
1432 1585 2.860009 ACTCGTGGTGACTCTGAGTTA 58.140 47.619 12.27 4.80 35.66 2.24
1433 1586 2.814919 ACTCGTGGTGACTCTGAGTTAG 59.185 50.000 12.27 4.33 35.66 2.34
1434 1587 2.160205 TCGTGGTGACTCTGAGTTAGG 58.840 52.381 12.27 5.46 0.00 2.69
1435 1588 1.887198 CGTGGTGACTCTGAGTTAGGT 59.113 52.381 12.27 0.00 0.00 3.08
1436 1589 2.095161 CGTGGTGACTCTGAGTTAGGTC 60.095 54.545 12.27 0.00 0.00 3.85
1437 1590 2.891580 GTGGTGACTCTGAGTTAGGTCA 59.108 50.000 12.27 2.15 35.56 4.02
1438 1591 3.057174 GTGGTGACTCTGAGTTAGGTCAG 60.057 52.174 12.27 0.00 44.71 3.51
1447 1600 5.947228 CTGAGTTAGGTCAGAATTTTGCA 57.053 39.130 0.00 0.00 46.02 4.08
1448 1601 5.689383 TGAGTTAGGTCAGAATTTTGCAC 57.311 39.130 0.00 0.00 0.00 4.57
1449 1602 5.376625 TGAGTTAGGTCAGAATTTTGCACT 58.623 37.500 0.00 0.00 0.00 4.40
1450 1603 5.827797 TGAGTTAGGTCAGAATTTTGCACTT 59.172 36.000 0.00 0.00 0.00 3.16
1451 1604 6.321181 TGAGTTAGGTCAGAATTTTGCACTTT 59.679 34.615 0.00 0.00 0.00 2.66
1452 1605 6.507023 AGTTAGGTCAGAATTTTGCACTTTG 58.493 36.000 0.00 0.00 0.00 2.77
1453 1606 4.326504 AGGTCAGAATTTTGCACTTTGG 57.673 40.909 0.00 0.00 0.00 3.28
1454 1607 3.070015 AGGTCAGAATTTTGCACTTTGGG 59.930 43.478 0.00 0.00 0.00 4.12
1455 1608 2.802247 GTCAGAATTTTGCACTTTGGGC 59.198 45.455 0.00 0.00 0.00 5.36
1456 1609 1.794116 CAGAATTTTGCACTTTGGGCG 59.206 47.619 0.00 0.00 0.00 6.13
1457 1610 1.686052 AGAATTTTGCACTTTGGGCGA 59.314 42.857 0.00 0.00 0.00 5.54
1458 1611 2.061028 GAATTTTGCACTTTGGGCGAG 58.939 47.619 0.00 0.00 0.00 5.03
1459 1612 1.327303 ATTTTGCACTTTGGGCGAGA 58.673 45.000 0.00 0.00 0.00 4.04
1460 1613 1.107114 TTTTGCACTTTGGGCGAGAA 58.893 45.000 0.00 0.00 0.00 2.87
1461 1614 1.327303 TTTGCACTTTGGGCGAGAAT 58.673 45.000 0.00 0.00 0.00 2.40
1462 1615 1.327303 TTGCACTTTGGGCGAGAATT 58.673 45.000 0.00 0.00 0.00 2.17
1463 1616 0.597568 TGCACTTTGGGCGAGAATTG 59.402 50.000 0.00 0.00 0.00 2.32
1464 1617 0.109132 GCACTTTGGGCGAGAATTGG 60.109 55.000 0.00 0.00 0.00 3.16
1465 1618 1.533625 CACTTTGGGCGAGAATTGGA 58.466 50.000 0.00 0.00 0.00 3.53
1466 1619 1.470098 CACTTTGGGCGAGAATTGGAG 59.530 52.381 0.00 0.00 0.00 3.86
1467 1620 1.098050 CTTTGGGCGAGAATTGGAGG 58.902 55.000 0.00 0.00 0.00 4.30
1468 1621 0.404040 TTTGGGCGAGAATTGGAGGT 59.596 50.000 0.00 0.00 0.00 3.85
1469 1622 0.322456 TTGGGCGAGAATTGGAGGTG 60.322 55.000 0.00 0.00 0.00 4.00
1470 1623 1.299976 GGGCGAGAATTGGAGGTGT 59.700 57.895 0.00 0.00 0.00 4.16
1471 1624 0.744771 GGGCGAGAATTGGAGGTGTC 60.745 60.000 0.00 0.00 0.00 3.67
1472 1625 0.250513 GGCGAGAATTGGAGGTGTCT 59.749 55.000 0.00 0.00 0.00 3.41
1473 1626 1.339151 GGCGAGAATTGGAGGTGTCTT 60.339 52.381 0.00 0.00 0.00 3.01
1474 1627 1.734465 GCGAGAATTGGAGGTGTCTTG 59.266 52.381 0.00 0.00 0.00 3.02
1475 1628 1.734465 CGAGAATTGGAGGTGTCTTGC 59.266 52.381 0.00 0.00 0.00 4.01
1476 1629 2.613977 CGAGAATTGGAGGTGTCTTGCT 60.614 50.000 0.00 0.00 0.00 3.91
1477 1630 3.416156 GAGAATTGGAGGTGTCTTGCTT 58.584 45.455 0.00 0.00 0.00 3.91
1478 1631 4.579869 GAGAATTGGAGGTGTCTTGCTTA 58.420 43.478 0.00 0.00 0.00 3.09
1479 1632 4.327680 AGAATTGGAGGTGTCTTGCTTAC 58.672 43.478 0.00 0.00 0.00 2.34
1480 1633 2.163818 TTGGAGGTGTCTTGCTTACG 57.836 50.000 0.00 0.00 0.00 3.18
1481 1634 0.320421 TGGAGGTGTCTTGCTTACGC 60.320 55.000 0.00 0.00 0.00 4.42
1482 1635 1.352156 GGAGGTGTCTTGCTTACGCG 61.352 60.000 3.53 3.53 39.65 6.01
1483 1636 1.956620 GAGGTGTCTTGCTTACGCGC 61.957 60.000 5.73 0.00 39.65 6.86
1484 1637 2.027625 GGTGTCTTGCTTACGCGCT 61.028 57.895 5.73 0.00 39.65 5.92
1485 1638 1.416434 GTGTCTTGCTTACGCGCTC 59.584 57.895 5.73 0.00 39.65 5.03
1486 1639 1.736645 TGTCTTGCTTACGCGCTCC 60.737 57.895 5.73 0.00 39.65 4.70
1487 1640 2.125673 TCTTGCTTACGCGCTCCC 60.126 61.111 5.73 0.00 39.65 4.30
1488 1641 2.434185 CTTGCTTACGCGCTCCCA 60.434 61.111 5.73 0.00 39.65 4.37
1489 1642 2.434185 TTGCTTACGCGCTCCCAG 60.434 61.111 5.73 0.00 39.65 4.45
1491 1644 4.821589 GCTTACGCGCTCCCAGCT 62.822 66.667 5.73 0.00 39.60 4.24
1492 1645 2.583593 CTTACGCGCTCCCAGCTC 60.584 66.667 5.73 0.00 39.60 4.09
1493 1646 4.143333 TTACGCGCTCCCAGCTCC 62.143 66.667 5.73 0.00 39.60 4.70
1506 1659 2.049063 GCTCCAGCGACGTGTCTT 60.049 61.111 0.00 0.00 0.00 3.01
1507 1660 2.375766 GCTCCAGCGACGTGTCTTG 61.376 63.158 0.00 0.00 0.00 3.02
1508 1661 2.355837 TCCAGCGACGTGTCTTGC 60.356 61.111 0.00 0.00 0.00 4.01
1509 1662 2.661537 CCAGCGACGTGTCTTGCA 60.662 61.111 0.00 0.00 0.00 4.08
1510 1663 2.029288 CCAGCGACGTGTCTTGCAT 61.029 57.895 0.00 0.00 0.00 3.96
1511 1664 0.735978 CCAGCGACGTGTCTTGCATA 60.736 55.000 0.00 0.00 0.00 3.14
1512 1665 1.280982 CAGCGACGTGTCTTGCATAT 58.719 50.000 0.00 0.00 0.00 1.78
1513 1666 1.660607 CAGCGACGTGTCTTGCATATT 59.339 47.619 0.00 0.00 0.00 1.28
1514 1667 1.660607 AGCGACGTGTCTTGCATATTG 59.339 47.619 0.00 0.00 0.00 1.90
1515 1668 1.852077 GCGACGTGTCTTGCATATTGC 60.852 52.381 0.00 0.00 45.29 3.56
1524 1677 4.826600 GCATATTGCGTCGATGCC 57.173 55.556 26.06 9.41 40.08 4.40
1525 1678 1.941072 GCATATTGCGTCGATGCCA 59.059 52.632 26.06 16.62 40.08 4.92
1526 1679 0.307453 GCATATTGCGTCGATGCCAA 59.693 50.000 26.06 19.27 40.08 4.52
1527 1680 1.661178 GCATATTGCGTCGATGCCAAG 60.661 52.381 26.06 12.62 40.08 3.61
1528 1681 1.069703 CATATTGCGTCGATGCCAAGG 60.070 52.381 26.06 9.83 0.00 3.61
1529 1682 0.813610 TATTGCGTCGATGCCAAGGG 60.814 55.000 26.06 0.00 0.00 3.95
1530 1683 2.819984 ATTGCGTCGATGCCAAGGGT 62.820 55.000 26.06 3.70 0.00 4.34
1531 1684 2.173758 TTGCGTCGATGCCAAGGGTA 62.174 55.000 26.06 3.17 0.00 3.69
1532 1685 2.171725 GCGTCGATGCCAAGGGTAC 61.172 63.158 19.11 0.00 0.00 3.34
1533 1686 1.216977 CGTCGATGCCAAGGGTACA 59.783 57.895 0.00 0.00 0.00 2.90
1534 1687 1.082117 CGTCGATGCCAAGGGTACAC 61.082 60.000 0.00 0.00 0.00 2.90
1535 1688 1.082117 GTCGATGCCAAGGGTACACG 61.082 60.000 0.00 0.00 0.00 4.49
1536 1689 1.216977 CGATGCCAAGGGTACACGA 59.783 57.895 0.00 0.00 0.00 4.35
1537 1690 0.179084 CGATGCCAAGGGTACACGAT 60.179 55.000 0.00 0.00 0.00 3.73
1538 1691 1.299541 GATGCCAAGGGTACACGATG 58.700 55.000 0.00 0.00 0.00 3.84
1539 1692 0.908910 ATGCCAAGGGTACACGATGA 59.091 50.000 5.63 0.00 0.00 2.92
1540 1693 0.036765 TGCCAAGGGTACACGATGAC 60.037 55.000 5.63 0.00 0.00 3.06
1541 1694 1.082117 GCCAAGGGTACACGATGACG 61.082 60.000 5.63 0.00 45.75 4.35
1551 1704 2.386491 CGATGACGTGTTCGCGTG 59.614 61.111 15.81 0.00 45.79 5.34
1552 1705 2.093983 GATGACGTGTTCGCGTGC 59.906 61.111 15.81 8.33 45.79 5.34
1553 1706 2.653967 GATGACGTGTTCGCGTGCA 61.654 57.895 15.81 12.94 45.79 4.57
1554 1707 2.153219 GATGACGTGTTCGCGTGCAA 62.153 55.000 15.81 2.63 45.79 4.08
1555 1708 2.423039 GACGTGTTCGCGTGCAAC 60.423 61.111 15.81 3.80 45.79 4.17
1556 1709 2.867091 GACGTGTTCGCGTGCAACT 61.867 57.895 15.81 0.00 45.79 3.16
1557 1710 2.323105 CGTGTTCGCGTGCAACTT 59.677 55.556 5.77 0.00 31.75 2.66
1558 1711 1.297304 CGTGTTCGCGTGCAACTTT 60.297 52.632 5.77 0.00 31.75 2.66
1559 1712 1.520133 CGTGTTCGCGTGCAACTTTG 61.520 55.000 5.77 0.00 31.75 2.77
1560 1713 0.247894 GTGTTCGCGTGCAACTTTGA 60.248 50.000 5.77 0.00 31.75 2.69
1561 1714 0.660488 TGTTCGCGTGCAACTTTGAT 59.340 45.000 5.77 0.00 31.75 2.57
1562 1715 1.064803 TGTTCGCGTGCAACTTTGATT 59.935 42.857 5.77 0.00 31.75 2.57
1563 1716 1.708680 GTTCGCGTGCAACTTTGATTC 59.291 47.619 5.77 0.00 31.75 2.52
1564 1717 0.940833 TCGCGTGCAACTTTGATTCA 59.059 45.000 5.77 0.00 31.75 2.57
1565 1718 1.069973 TCGCGTGCAACTTTGATTCAG 60.070 47.619 5.77 0.00 31.75 3.02
1566 1719 1.069973 CGCGTGCAACTTTGATTCAGA 60.070 47.619 0.00 0.00 31.75 3.27
1567 1720 2.413239 CGCGTGCAACTTTGATTCAGAT 60.413 45.455 0.00 0.00 31.75 2.90
1568 1721 3.568538 GCGTGCAACTTTGATTCAGATT 58.431 40.909 0.00 0.00 31.75 2.40
1569 1722 3.605486 GCGTGCAACTTTGATTCAGATTC 59.395 43.478 0.00 0.00 31.75 2.52
1570 1723 4.786507 CGTGCAACTTTGATTCAGATTCA 58.213 39.130 0.00 0.00 31.75 2.57
1571 1724 5.214417 CGTGCAACTTTGATTCAGATTCAA 58.786 37.500 3.97 3.97 31.75 2.69
1572 1725 5.116074 CGTGCAACTTTGATTCAGATTCAAC 59.884 40.000 7.16 0.00 33.03 3.18
1573 1726 6.211515 GTGCAACTTTGATTCAGATTCAACT 58.788 36.000 7.16 0.00 33.03 3.16
1574 1727 6.698766 GTGCAACTTTGATTCAGATTCAACTT 59.301 34.615 7.16 0.93 33.03 2.66
1575 1728 7.862372 GTGCAACTTTGATTCAGATTCAACTTA 59.138 33.333 7.16 0.00 33.03 2.24
1576 1729 8.412456 TGCAACTTTGATTCAGATTCAACTTAA 58.588 29.630 7.16 0.00 33.03 1.85
1577 1730 8.694394 GCAACTTTGATTCAGATTCAACTTAAC 58.306 33.333 7.16 0.00 33.03 2.01
1578 1731 9.185192 CAACTTTGATTCAGATTCAACTTAACC 57.815 33.333 7.16 0.00 33.03 2.85
1579 1732 8.697507 ACTTTGATTCAGATTCAACTTAACCT 57.302 30.769 7.16 0.00 33.03 3.50
1580 1733 9.136323 ACTTTGATTCAGATTCAACTTAACCTT 57.864 29.630 7.16 0.00 33.03 3.50
1581 1734 9.971922 CTTTGATTCAGATTCAACTTAACCTTT 57.028 29.630 7.16 0.00 33.03 3.11
1583 1736 9.748708 TTGATTCAGATTCAACTTAACCTTTTG 57.251 29.630 3.97 0.00 0.00 2.44
1585 1738 6.084326 TCAGATTCAACTTAACCTTTTGGC 57.916 37.500 0.00 0.00 45.59 4.52
1586 1739 5.596361 TCAGATTCAACTTAACCTTTTGGCA 59.404 36.000 0.00 0.00 45.59 4.92
1587 1740 6.097554 TCAGATTCAACTTAACCTTTTGGCAA 59.902 34.615 0.00 0.00 45.59 4.52
1588 1741 6.930722 CAGATTCAACTTAACCTTTTGGCAAT 59.069 34.615 0.00 0.00 45.59 3.56
1589 1742 8.087750 CAGATTCAACTTAACCTTTTGGCAATA 58.912 33.333 0.00 0.00 45.59 1.90
1590 1743 8.306761 AGATTCAACTTAACCTTTTGGCAATAG 58.693 33.333 10.32 10.32 45.59 1.73
1591 1744 7.589958 TTCAACTTAACCTTTTGGCAATAGA 57.410 32.000 17.72 0.00 45.59 1.98
1592 1745 7.775053 TCAACTTAACCTTTTGGCAATAGAT 57.225 32.000 17.72 9.46 45.59 1.98
1593 1746 8.189119 TCAACTTAACCTTTTGGCAATAGATT 57.811 30.769 17.72 10.50 45.59 2.40
1594 1747 9.303116 TCAACTTAACCTTTTGGCAATAGATTA 57.697 29.630 17.72 9.51 45.59 1.75
1595 1748 9.573133 CAACTTAACCTTTTGGCAATAGATTAG 57.427 33.333 17.72 11.63 45.59 1.73
1596 1749 8.879427 ACTTAACCTTTTGGCAATAGATTAGT 57.121 30.769 17.72 12.13 45.59 2.24
1597 1750 8.739972 ACTTAACCTTTTGGCAATAGATTAGTG 58.260 33.333 17.72 10.76 45.59 2.74
1617 1770 2.631418 CAAGGCTTGCAGAGTGATTG 57.369 50.000 15.25 0.00 0.00 2.67
1618 1771 1.884579 CAAGGCTTGCAGAGTGATTGT 59.115 47.619 15.25 0.00 0.00 2.71
1619 1772 1.818642 AGGCTTGCAGAGTGATTGTC 58.181 50.000 0.00 0.00 0.00 3.18
1620 1773 0.807496 GGCTTGCAGAGTGATTGTCC 59.193 55.000 0.00 0.00 0.00 4.02
1621 1774 0.807496 GCTTGCAGAGTGATTGTCCC 59.193 55.000 0.00 0.00 0.00 4.46
1622 1775 1.081892 CTTGCAGAGTGATTGTCCCG 58.918 55.000 0.00 0.00 0.00 5.14
1623 1776 0.955428 TTGCAGAGTGATTGTCCCGC 60.955 55.000 0.00 0.00 0.00 6.13
1624 1777 1.078848 GCAGAGTGATTGTCCCGCT 60.079 57.895 0.00 0.00 0.00 5.52
1625 1778 1.364626 GCAGAGTGATTGTCCCGCTG 61.365 60.000 0.00 0.00 0.00 5.18
1626 1779 0.247460 CAGAGTGATTGTCCCGCTGA 59.753 55.000 0.00 0.00 0.00 4.26
1627 1780 1.134580 CAGAGTGATTGTCCCGCTGAT 60.135 52.381 0.00 0.00 0.00 2.90
1628 1781 2.101415 CAGAGTGATTGTCCCGCTGATA 59.899 50.000 0.00 0.00 0.00 2.15
1629 1782 2.363680 AGAGTGATTGTCCCGCTGATAG 59.636 50.000 0.00 0.00 0.00 2.08
1630 1783 2.362397 GAGTGATTGTCCCGCTGATAGA 59.638 50.000 0.00 0.00 0.00 1.98
1631 1784 2.968574 AGTGATTGTCCCGCTGATAGAT 59.031 45.455 0.00 0.00 0.00 1.98
1632 1785 3.062763 GTGATTGTCCCGCTGATAGATG 58.937 50.000 0.00 0.00 0.00 2.90
1633 1786 2.072298 GATTGTCCCGCTGATAGATGC 58.928 52.381 0.00 0.00 0.00 3.91
1634 1787 1.123077 TTGTCCCGCTGATAGATGCT 58.877 50.000 0.00 0.00 0.00 3.79
1635 1788 0.390492 TGTCCCGCTGATAGATGCTG 59.610 55.000 0.00 0.00 0.00 4.41
1636 1789 0.390860 GTCCCGCTGATAGATGCTGT 59.609 55.000 0.00 0.00 0.00 4.40
1637 1790 1.123077 TCCCGCTGATAGATGCTGTT 58.877 50.000 0.00 0.00 0.00 3.16
1638 1791 1.202568 TCCCGCTGATAGATGCTGTTG 60.203 52.381 0.00 0.00 0.00 3.33
1639 1792 1.224075 CCGCTGATAGATGCTGTTGG 58.776 55.000 0.00 0.00 0.00 3.77
1640 1793 1.202568 CCGCTGATAGATGCTGTTGGA 60.203 52.381 0.00 0.00 0.00 3.53
1641 1794 2.549563 CCGCTGATAGATGCTGTTGGAT 60.550 50.000 0.00 0.00 0.00 3.41
1642 1795 2.735663 CGCTGATAGATGCTGTTGGATC 59.264 50.000 0.00 0.00 40.70 3.36
1643 1796 3.736720 GCTGATAGATGCTGTTGGATCA 58.263 45.455 0.00 0.00 42.50 2.92
1644 1797 3.497640 GCTGATAGATGCTGTTGGATCAC 59.502 47.826 0.00 0.00 42.50 3.06
1645 1798 4.700700 CTGATAGATGCTGTTGGATCACA 58.299 43.478 0.00 0.00 42.50 3.58
1646 1799 4.700700 TGATAGATGCTGTTGGATCACAG 58.299 43.478 8.49 8.49 46.15 3.66
1647 1800 4.406649 TGATAGATGCTGTTGGATCACAGA 59.593 41.667 15.47 3.50 46.29 3.41
1648 1801 3.928005 AGATGCTGTTGGATCACAGAT 57.072 42.857 15.47 7.34 46.29 2.90
1649 1802 4.232188 AGATGCTGTTGGATCACAGATT 57.768 40.909 15.47 3.46 46.29 2.40
1650 1803 4.197750 AGATGCTGTTGGATCACAGATTC 58.802 43.478 15.47 10.83 46.29 2.52
1651 1804 3.421919 TGCTGTTGGATCACAGATTCA 57.578 42.857 15.47 3.44 46.29 2.57
1652 1805 3.753815 TGCTGTTGGATCACAGATTCAA 58.246 40.909 15.47 0.00 46.29 2.69
1653 1806 3.503363 TGCTGTTGGATCACAGATTCAAC 59.497 43.478 19.46 19.46 46.29 3.18
1654 1807 3.755378 GCTGTTGGATCACAGATTCAACT 59.245 43.478 24.05 0.00 46.29 3.16
1655 1808 4.217118 GCTGTTGGATCACAGATTCAACTT 59.783 41.667 24.05 0.00 46.29 2.66
1656 1809 5.412594 GCTGTTGGATCACAGATTCAACTTA 59.587 40.000 24.05 10.33 46.29 2.24
1657 1810 6.621596 GCTGTTGGATCACAGATTCAACTTAC 60.622 42.308 24.05 13.89 46.29 2.34
1658 1811 6.533730 TGTTGGATCACAGATTCAACTTACT 58.466 36.000 24.05 0.00 38.64 2.24
1659 1812 6.650807 TGTTGGATCACAGATTCAACTTACTC 59.349 38.462 24.05 5.36 38.64 2.59
1660 1813 5.734720 TGGATCACAGATTCAACTTACTCC 58.265 41.667 0.00 0.00 0.00 3.85
1661 1814 5.485353 TGGATCACAGATTCAACTTACTCCT 59.515 40.000 0.00 0.00 0.00 3.69
1662 1815 5.814705 GGATCACAGATTCAACTTACTCCTG 59.185 44.000 0.00 0.00 0.00 3.86
1663 1816 6.351371 GGATCACAGATTCAACTTACTCCTGA 60.351 42.308 0.00 0.00 0.00 3.86
1664 1817 6.419484 TCACAGATTCAACTTACTCCTGAA 57.581 37.500 0.00 0.00 33.82 3.02
1665 1818 7.009179 TCACAGATTCAACTTACTCCTGAAT 57.991 36.000 0.00 0.00 41.37 2.57
1666 1819 7.453393 TCACAGATTCAACTTACTCCTGAATT 58.547 34.615 0.00 0.00 39.34 2.17
1667 1820 7.939039 TCACAGATTCAACTTACTCCTGAATTT 59.061 33.333 0.00 0.00 39.34 1.82
1668 1821 9.219603 CACAGATTCAACTTACTCCTGAATTTA 57.780 33.333 0.00 0.00 39.34 1.40
1669 1822 9.965902 ACAGATTCAACTTACTCCTGAATTTAT 57.034 29.630 0.00 0.00 39.34 1.40
1697 1850 7.759489 TTGAATCCACTTTAACTGCATTACT 57.241 32.000 0.00 0.00 0.00 2.24
1698 1851 7.377766 TGAATCCACTTTAACTGCATTACTC 57.622 36.000 0.00 0.00 0.00 2.59
1699 1852 6.939730 TGAATCCACTTTAACTGCATTACTCA 59.060 34.615 0.00 0.00 0.00 3.41
1700 1853 7.611467 TGAATCCACTTTAACTGCATTACTCAT 59.389 33.333 0.00 0.00 0.00 2.90
1701 1854 9.109393 GAATCCACTTTAACTGCATTACTCATA 57.891 33.333 0.00 0.00 0.00 2.15
1702 1855 8.668510 ATCCACTTTAACTGCATTACTCATAG 57.331 34.615 0.00 0.00 0.00 2.23
1703 1856 7.847096 TCCACTTTAACTGCATTACTCATAGA 58.153 34.615 0.00 0.00 0.00 1.98
1704 1857 7.981789 TCCACTTTAACTGCATTACTCATAGAG 59.018 37.037 0.00 0.00 35.52 2.43
1705 1858 7.766278 CCACTTTAACTGCATTACTCATAGAGT 59.234 37.037 4.93 4.93 45.54 3.24
1706 1859 9.803315 CACTTTAACTGCATTACTCATAGAGTA 57.197 33.333 2.90 2.90 41.51 2.59
1707 1860 9.804758 ACTTTAACTGCATTACTCATAGAGTAC 57.195 33.333 6.39 0.00 43.65 2.73
1708 1861 9.803315 CTTTAACTGCATTACTCATAGAGTACA 57.197 33.333 6.39 2.04 43.65 2.90
1709 1862 9.582431 TTTAACTGCATTACTCATAGAGTACAC 57.418 33.333 6.39 0.00 43.65 2.90
1710 1863 6.775594 ACTGCATTACTCATAGAGTACACA 57.224 37.500 6.39 5.05 43.65 3.72
1711 1864 7.170393 ACTGCATTACTCATAGAGTACACAA 57.830 36.000 6.39 0.00 43.65 3.33
1712 1865 7.786030 ACTGCATTACTCATAGAGTACACAAT 58.214 34.615 6.39 0.00 43.65 2.71
1713 1866 8.260818 ACTGCATTACTCATAGAGTACACAATT 58.739 33.333 6.39 0.00 43.65 2.32
1714 1867 8.648557 TGCATTACTCATAGAGTACACAATTC 57.351 34.615 6.39 0.00 43.65 2.17
1715 1868 7.710907 TGCATTACTCATAGAGTACACAATTCC 59.289 37.037 6.39 0.00 43.65 3.01
1716 1869 7.928706 GCATTACTCATAGAGTACACAATTCCT 59.071 37.037 6.39 0.00 43.65 3.36
1717 1870 9.254133 CATTACTCATAGAGTACACAATTCCTG 57.746 37.037 6.39 0.00 43.65 3.86
1718 1871 8.589701 TTACTCATAGAGTACACAATTCCTGA 57.410 34.615 6.39 0.00 43.65 3.86
1719 1872 7.482169 ACTCATAGAGTACACAATTCCTGAA 57.518 36.000 0.00 0.00 41.51 3.02
1720 1873 8.083828 ACTCATAGAGTACACAATTCCTGAAT 57.916 34.615 0.00 0.00 41.51 2.57
1721 1874 8.543774 ACTCATAGAGTACACAATTCCTGAATT 58.456 33.333 0.00 0.00 41.51 2.17
1722 1875 9.388506 CTCATAGAGTACACAATTCCTGAATTT 57.611 33.333 2.42 0.00 38.84 1.82
1723 1876 9.383519 TCATAGAGTACACAATTCCTGAATTTC 57.616 33.333 2.42 0.00 38.84 2.17
1724 1877 8.616076 CATAGAGTACACAATTCCTGAATTTCC 58.384 37.037 2.42 0.00 38.84 3.13
1725 1878 5.946377 AGAGTACACAATTCCTGAATTTCCC 59.054 40.000 2.42 0.00 38.84 3.97
1726 1879 5.892348 AGTACACAATTCCTGAATTTCCCT 58.108 37.500 2.42 0.00 38.84 4.20
1727 1880 5.946377 AGTACACAATTCCTGAATTTCCCTC 59.054 40.000 2.42 0.00 38.84 4.30
1728 1881 4.739793 ACACAATTCCTGAATTTCCCTCA 58.260 39.130 2.42 0.00 38.84 3.86
1729 1882 4.524328 ACACAATTCCTGAATTTCCCTCAC 59.476 41.667 2.42 0.00 38.84 3.51
1730 1883 4.082026 CACAATTCCTGAATTTCCCTCACC 60.082 45.833 2.42 0.00 38.84 4.02
1731 1884 2.899303 TTCCTGAATTTCCCTCACCC 57.101 50.000 0.00 0.00 0.00 4.61
1732 1885 2.059756 TCCTGAATTTCCCTCACCCT 57.940 50.000 0.00 0.00 0.00 4.34
1733 1886 2.358258 TCCTGAATTTCCCTCACCCTT 58.642 47.619 0.00 0.00 0.00 3.95
1734 1887 2.308866 TCCTGAATTTCCCTCACCCTTC 59.691 50.000 0.00 0.00 0.00 3.46
1735 1888 2.621668 CCTGAATTTCCCTCACCCTTCC 60.622 54.545 0.00 0.00 0.00 3.46
1736 1889 1.357761 TGAATTTCCCTCACCCTTCCC 59.642 52.381 0.00 0.00 0.00 3.97
1737 1890 1.641192 GAATTTCCCTCACCCTTCCCT 59.359 52.381 0.00 0.00 0.00 4.20
1738 1891 2.680439 ATTTCCCTCACCCTTCCCTA 57.320 50.000 0.00 0.00 0.00 3.53
1739 1892 1.966845 TTTCCCTCACCCTTCCCTAG 58.033 55.000 0.00 0.00 0.00 3.02
1740 1893 0.797579 TTCCCTCACCCTTCCCTAGT 59.202 55.000 0.00 0.00 0.00 2.57
1753 1906 2.679082 TCCCTAGTCATACAAGCTCCC 58.321 52.381 0.00 0.00 0.00 4.30
1811 1964 3.922171 ATCCACCTCAAGCCTTTCTAG 57.078 47.619 0.00 0.00 0.00 2.43
1881 2034 3.719871 TGGAGGGAGTATTAAGTGCTCA 58.280 45.455 0.00 0.00 40.91 4.26
1882 2035 4.101114 TGGAGGGAGTATTAAGTGCTCAA 58.899 43.478 0.00 0.00 40.91 3.02
1883 2036 4.721776 TGGAGGGAGTATTAAGTGCTCAAT 59.278 41.667 0.00 0.00 40.91 2.57
1884 2037 5.191722 TGGAGGGAGTATTAAGTGCTCAATT 59.808 40.000 0.00 0.00 40.91 2.32
1885 2038 5.529060 GGAGGGAGTATTAAGTGCTCAATTG 59.471 44.000 0.00 0.00 40.91 2.32
1886 2039 4.884164 AGGGAGTATTAAGTGCTCAATTGC 59.116 41.667 0.00 0.00 40.91 3.56
1887 2040 4.884164 GGGAGTATTAAGTGCTCAATTGCT 59.116 41.667 0.00 0.00 40.91 3.91
1888 2041 5.008118 GGGAGTATTAAGTGCTCAATTGCTC 59.992 44.000 0.00 0.00 40.91 4.26
1929 2082 3.387699 ACTGCATATTAAATGGGCCCAAC 59.612 43.478 32.58 10.15 0.00 3.77
1930 2083 3.378512 TGCATATTAAATGGGCCCAACA 58.621 40.909 32.58 14.46 0.00 3.33
1931 2084 3.972638 TGCATATTAAATGGGCCCAACAT 59.027 39.130 32.58 20.28 0.00 2.71
1932 2085 4.202336 TGCATATTAAATGGGCCCAACATG 60.202 41.667 32.58 23.55 0.00 3.21
1987 2140 5.745312 AACAGTGGATCAAGACATACTCA 57.255 39.130 0.00 0.00 0.00 3.41
1988 2141 5.336150 ACAGTGGATCAAGACATACTCAG 57.664 43.478 0.00 0.00 0.00 3.35
1989 2142 5.019470 ACAGTGGATCAAGACATACTCAGA 58.981 41.667 0.00 0.00 0.00 3.27
1990 2143 5.126869 ACAGTGGATCAAGACATACTCAGAG 59.873 44.000 0.00 0.00 0.00 3.35
1991 2144 4.648762 AGTGGATCAAGACATACTCAGAGG 59.351 45.833 1.53 0.00 0.00 3.69
1992 2145 3.963374 TGGATCAAGACATACTCAGAGGG 59.037 47.826 1.53 0.00 0.00 4.30
1998 2182 7.150447 TCAAGACATACTCAGAGGGTATAGA 57.850 40.000 1.53 0.00 0.00 1.98
2011 2195 6.207810 CAGAGGGTATAGAGATCTAAACGCTT 59.792 42.308 13.47 5.46 31.39 4.68
2048 2232 4.991056 CGGAGGGAGTATATGACAACAATG 59.009 45.833 0.00 0.00 0.00 2.82
2049 2233 5.453339 CGGAGGGAGTATATGACAACAATGT 60.453 44.000 0.00 0.00 44.25 2.71
2057 2241 8.560355 AGTATATGACAACAATGTTACTTGCA 57.440 30.769 0.00 0.00 40.74 4.08
2089 2273 1.325476 AATGCCCTAAAGCTGCAGGC 61.325 55.000 17.12 10.04 44.13 4.85
2114 2298 4.637977 GGCAAAATTTTGGGTGTCTGAAAA 59.362 37.500 27.60 0.00 38.57 2.29
2115 2299 5.124617 GGCAAAATTTTGGGTGTCTGAAAAA 59.875 36.000 27.60 0.00 38.57 1.94
2212 2421 9.244292 TGTTACCAAATTATGCATTTAGGTGTA 57.756 29.630 3.54 0.00 37.11 2.90
2227 2436 2.371841 AGGTGTATGAACTGCTTCCACA 59.628 45.455 0.00 0.00 0.00 4.17
2231 2440 4.036262 GTGTATGAACTGCTTCCACAACAA 59.964 41.667 0.00 0.00 0.00 2.83
2232 2441 3.715628 ATGAACTGCTTCCACAACAAC 57.284 42.857 0.00 0.00 0.00 3.32
2244 2453 1.204062 CAACAACGGCAGTAGCACG 59.796 57.895 0.00 0.00 44.61 5.34
2245 2454 2.604174 AACAACGGCAGTAGCACGC 61.604 57.895 0.00 0.00 44.61 5.34
2266 2475 3.815401 GCCATGTACACAATACAGATCCC 59.185 47.826 0.00 0.00 0.00 3.85
2295 2504 6.168270 TCCCCTTCCAGTGTTAAATTTTTG 57.832 37.500 0.00 0.00 0.00 2.44
2296 2505 5.071115 TCCCCTTCCAGTGTTAAATTTTTGG 59.929 40.000 0.00 0.00 0.00 3.28
2303 2512 6.100424 TCCAGTGTTAAATTTTTGGGGAACAT 59.900 34.615 0.00 0.00 0.00 2.71
2317 2526 4.788075 TGGGGAACATTTCATCTCCTAAGA 59.212 41.667 0.00 0.00 37.10 2.10
2319 2528 5.339200 GGGGAACATTTCATCTCCTAAGACA 60.339 44.000 0.00 0.00 33.14 3.41
2321 2530 6.094186 GGGAACATTTCATCTCCTAAGACAAC 59.906 42.308 0.00 0.00 33.32 3.32
2322 2531 6.881602 GGAACATTTCATCTCCTAAGACAACT 59.118 38.462 0.00 0.00 33.32 3.16
2325 2534 7.453393 ACATTTCATCTCCTAAGACAACTTCA 58.547 34.615 0.00 0.00 37.53 3.02
2326 2535 7.605691 ACATTTCATCTCCTAAGACAACTTCAG 59.394 37.037 0.00 0.00 37.53 3.02
2327 2536 6.672266 TTCATCTCCTAAGACAACTTCAGT 57.328 37.500 0.00 0.00 37.53 3.41
2328 2537 7.776618 TTCATCTCCTAAGACAACTTCAGTA 57.223 36.000 0.00 0.00 37.53 2.74
2329 2538 7.159322 TCATCTCCTAAGACAACTTCAGTAC 57.841 40.000 0.00 0.00 37.53 2.73
2330 2539 6.719829 TCATCTCCTAAGACAACTTCAGTACA 59.280 38.462 0.00 0.00 37.53 2.90
2331 2540 6.576662 TCTCCTAAGACAACTTCAGTACAG 57.423 41.667 0.00 0.00 37.53 2.74
2332 2541 6.069331 TCTCCTAAGACAACTTCAGTACAGT 58.931 40.000 0.00 0.00 37.53 3.55
2333 2542 6.207025 TCTCCTAAGACAACTTCAGTACAGTC 59.793 42.308 0.00 0.00 37.53 3.51
2334 2543 6.069331 TCCTAAGACAACTTCAGTACAGTCT 58.931 40.000 0.00 0.00 36.80 3.24
2335 2544 7.229308 TCCTAAGACAACTTCAGTACAGTCTA 58.771 38.462 8.99 0.00 35.33 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.982516 ACTAACCTGAGTAGAGGCATCA 58.017 45.455 0.00 0.00 36.46 3.07
1 2 5.770663 TCATACTAACCTGAGTAGAGGCATC 59.229 44.000 0.00 0.00 35.42 3.91
2 3 5.706447 TCATACTAACCTGAGTAGAGGCAT 58.294 41.667 0.00 0.00 35.42 4.40
3 4 5.125367 TCATACTAACCTGAGTAGAGGCA 57.875 43.478 0.00 0.00 35.42 4.75
4 5 6.376018 CCTATCATACTAACCTGAGTAGAGGC 59.624 46.154 0.00 0.00 35.42 4.70
5 6 7.691213 TCCTATCATACTAACCTGAGTAGAGG 58.309 42.308 0.00 0.00 35.42 3.69
6 7 8.598916 TCTCCTATCATACTAACCTGAGTAGAG 58.401 40.741 0.00 0.00 35.42 2.43
7 8 8.507582 TCTCCTATCATACTAACCTGAGTAGA 57.492 38.462 0.00 0.00 35.42 2.59
8 9 8.598916 TCTCTCCTATCATACTAACCTGAGTAG 58.401 40.741 0.00 0.00 35.42 2.57
9 10 8.377034 GTCTCTCCTATCATACTAACCTGAGTA 58.623 40.741 0.00 0.00 36.38 2.59
10 11 7.228590 GTCTCTCCTATCATACTAACCTGAGT 58.771 42.308 0.00 0.00 0.00 3.41
11 12 6.657541 GGTCTCTCCTATCATACTAACCTGAG 59.342 46.154 0.00 0.00 0.00 3.35
12 13 6.102762 TGGTCTCTCCTATCATACTAACCTGA 59.897 42.308 0.00 0.00 37.07 3.86
13 14 6.307776 TGGTCTCTCCTATCATACTAACCTG 58.692 44.000 0.00 0.00 37.07 4.00
14 15 6.532119 TGGTCTCTCCTATCATACTAACCT 57.468 41.667 0.00 0.00 37.07 3.50
15 16 7.784470 ATTGGTCTCTCCTATCATACTAACC 57.216 40.000 0.00 0.00 37.07 2.85
20 21 8.979574 CGTTTTTATTGGTCTCTCCTATCATAC 58.020 37.037 0.00 0.00 37.07 2.39
21 22 8.701895 ACGTTTTTATTGGTCTCTCCTATCATA 58.298 33.333 0.00 0.00 37.07 2.15
22 23 7.565680 ACGTTTTTATTGGTCTCTCCTATCAT 58.434 34.615 0.00 0.00 37.07 2.45
23 24 6.942976 ACGTTTTTATTGGTCTCTCCTATCA 58.057 36.000 0.00 0.00 37.07 2.15
24 25 7.977853 TGTACGTTTTTATTGGTCTCTCCTATC 59.022 37.037 0.00 0.00 37.07 2.08
25 26 7.844009 TGTACGTTTTTATTGGTCTCTCCTAT 58.156 34.615 0.00 0.00 37.07 2.57
26 27 7.230849 TGTACGTTTTTATTGGTCTCTCCTA 57.769 36.000 0.00 0.00 37.07 2.94
27 28 6.105397 TGTACGTTTTTATTGGTCTCTCCT 57.895 37.500 0.00 0.00 37.07 3.69
28 29 6.426025 AGTTGTACGTTTTTATTGGTCTCTCC 59.574 38.462 0.00 0.00 0.00 3.71
29 30 7.417496 AGTTGTACGTTTTTATTGGTCTCTC 57.583 36.000 0.00 0.00 0.00 3.20
30 31 8.146412 AGTAGTTGTACGTTTTTATTGGTCTCT 58.854 33.333 0.00 0.00 33.97 3.10
31 32 8.302965 AGTAGTTGTACGTTTTTATTGGTCTC 57.697 34.615 0.00 0.00 33.97 3.36
32 33 7.927629 TGAGTAGTTGTACGTTTTTATTGGTCT 59.072 33.333 0.00 0.00 33.97 3.85
33 34 8.075593 TGAGTAGTTGTACGTTTTTATTGGTC 57.924 34.615 0.00 0.00 33.97 4.02
34 35 8.436046 TTGAGTAGTTGTACGTTTTTATTGGT 57.564 30.769 0.00 0.00 33.97 3.67
35 36 8.767085 TCTTGAGTAGTTGTACGTTTTTATTGG 58.233 33.333 0.00 0.00 33.97 3.16
38 39 9.701098 TCATCTTGAGTAGTTGTACGTTTTTAT 57.299 29.630 0.00 0.00 33.97 1.40
39 40 8.971321 GTCATCTTGAGTAGTTGTACGTTTTTA 58.029 33.333 0.00 0.00 33.97 1.52
40 41 7.306399 CGTCATCTTGAGTAGTTGTACGTTTTT 60.306 37.037 0.00 0.00 33.97 1.94
41 42 6.143438 CGTCATCTTGAGTAGTTGTACGTTTT 59.857 38.462 0.00 0.00 33.97 2.43
42 43 5.628193 CGTCATCTTGAGTAGTTGTACGTTT 59.372 40.000 0.00 0.00 33.97 3.60
43 44 5.152097 CGTCATCTTGAGTAGTTGTACGTT 58.848 41.667 0.00 0.00 33.97 3.99
44 45 4.214971 ACGTCATCTTGAGTAGTTGTACGT 59.785 41.667 0.00 0.00 36.56 3.57
45 46 4.720090 ACGTCATCTTGAGTAGTTGTACG 58.280 43.478 0.00 0.00 35.55 3.67
46 47 5.696822 TGACGTCATCTTGAGTAGTTGTAC 58.303 41.667 15.76 0.00 0.00 2.90
47 48 5.952526 TGACGTCATCTTGAGTAGTTGTA 57.047 39.130 15.76 0.00 0.00 2.41
48 49 4.848562 TGACGTCATCTTGAGTAGTTGT 57.151 40.909 15.76 0.00 0.00 3.32
49 50 5.107453 GGTTTGACGTCATCTTGAGTAGTTG 60.107 44.000 20.80 0.00 0.00 3.16
50 51 4.989168 GGTTTGACGTCATCTTGAGTAGTT 59.011 41.667 20.80 0.00 0.00 2.24
51 52 4.557205 GGTTTGACGTCATCTTGAGTAGT 58.443 43.478 20.80 0.00 0.00 2.73
52 53 3.608506 CGGTTTGACGTCATCTTGAGTAG 59.391 47.826 20.80 0.83 0.00 2.57
53 54 3.005050 ACGGTTTGACGTCATCTTGAGTA 59.995 43.478 20.80 0.00 45.08 2.59
54 55 2.223971 ACGGTTTGACGTCATCTTGAGT 60.224 45.455 20.80 11.94 45.08 3.41
55 56 2.404215 ACGGTTTGACGTCATCTTGAG 58.596 47.619 20.80 11.31 45.08 3.02
56 57 2.519377 ACGGTTTGACGTCATCTTGA 57.481 45.000 20.80 0.00 45.08 3.02
67 68 2.038033 CCCCTTCTAGTCAACGGTTTGA 59.962 50.000 0.00 0.00 39.55 2.69
68 69 2.423577 CCCCTTCTAGTCAACGGTTTG 58.576 52.381 0.00 0.00 0.00 2.93
69 70 1.271217 GCCCCTTCTAGTCAACGGTTT 60.271 52.381 0.00 0.00 0.00 3.27
70 71 0.323957 GCCCCTTCTAGTCAACGGTT 59.676 55.000 0.00 0.00 0.00 4.44
71 72 0.834687 TGCCCCTTCTAGTCAACGGT 60.835 55.000 0.00 0.00 0.00 4.83
175 176 6.096987 AGAGAGTATACGAAACACATCCACAT 59.903 38.462 0.00 0.00 0.00 3.21
223 349 0.314935 ACAAGCCACAAAATCTGCCG 59.685 50.000 0.00 0.00 0.00 5.69
242 368 6.377146 AGAAAGCTCCAGTTTTTGTCAAGTTA 59.623 34.615 0.00 0.00 0.00 2.24
284 410 4.974645 TTTATCCTTCCAGACCGCATAT 57.025 40.909 0.00 0.00 0.00 1.78
354 483 4.582973 TCCACACAACATCCCATATTGA 57.417 40.909 0.00 0.00 0.00 2.57
508 639 9.723601 AACATTGGAAAAGCATATGTTTAACAT 57.276 25.926 15.22 15.22 42.35 2.71
551 683 0.766288 CCAACCCCAAACCCAACCAT 60.766 55.000 0.00 0.00 0.00 3.55
585 717 3.691118 GCATGATCCACTTTACAAGCTCA 59.309 43.478 0.00 0.00 0.00 4.26
854 990 5.845391 AAGTTTTACAAAGCCAGCACTAA 57.155 34.783 0.00 0.00 0.00 2.24
977 1118 1.490490 GAGCATCCACACAATCCCCTA 59.510 52.381 0.00 0.00 0.00 3.53
1085 1235 1.202211 GCATTGCAGCGATCACATCAA 60.202 47.619 3.15 0.00 0.00 2.57
1127 1277 4.485163 GTCGAAAATAGCAACAGCCAATT 58.515 39.130 0.00 0.00 0.00 2.32
1136 1286 7.148557 TGTGATAACAATCGTCGAAAATAGCAA 60.149 33.333 0.00 0.00 0.00 3.91
1171 1321 6.597672 TGCTCGTAATGGACTTGTGATAAATT 59.402 34.615 0.00 0.00 0.00 1.82
1228 1379 2.176889 TCTAGTAAGCCTCGCCAGTTT 58.823 47.619 0.00 0.00 0.00 2.66
1240 1391 6.301169 ACCAGGTGGAGAAAATCTAGTAAG 57.699 41.667 2.10 0.00 38.94 2.34
1243 1394 5.342866 AGTACCAGGTGGAGAAAATCTAGT 58.657 41.667 0.76 0.00 38.94 2.57
1362 1515 4.962051 GTTGAACGTTTTTCGATTCAACG 58.038 39.130 18.83 18.29 46.28 4.10
1364 1517 5.031578 CCTGTTGAACGTTTTTCGATTCAA 58.968 37.500 0.46 5.70 41.75 2.69
1365 1518 4.333095 TCCTGTTGAACGTTTTTCGATTCA 59.667 37.500 0.46 0.00 42.86 2.57
1366 1519 4.839796 TCCTGTTGAACGTTTTTCGATTC 58.160 39.130 0.46 0.00 42.86 2.52
1367 1520 4.886247 TCCTGTTGAACGTTTTTCGATT 57.114 36.364 0.46 0.00 42.86 3.34
1368 1521 4.886247 TTCCTGTTGAACGTTTTTCGAT 57.114 36.364 0.46 0.00 42.86 3.59
1369 1522 4.496673 CCATTCCTGTTGAACGTTTTTCGA 60.497 41.667 0.46 0.00 43.23 3.71
1370 1523 3.728718 CCATTCCTGTTGAACGTTTTTCG 59.271 43.478 0.46 0.00 46.00 3.46
1371 1524 3.489416 GCCATTCCTGTTGAACGTTTTTC 59.511 43.478 0.46 0.00 35.31 2.29
1372 1525 3.453424 GCCATTCCTGTTGAACGTTTTT 58.547 40.909 0.46 0.00 35.31 1.94
1373 1526 2.223947 GGCCATTCCTGTTGAACGTTTT 60.224 45.455 0.46 0.00 35.31 2.43
1374 1527 1.339929 GGCCATTCCTGTTGAACGTTT 59.660 47.619 0.46 0.00 35.31 3.60
1375 1528 0.958822 GGCCATTCCTGTTGAACGTT 59.041 50.000 0.00 0.00 35.31 3.99
1376 1529 0.893727 GGGCCATTCCTGTTGAACGT 60.894 55.000 4.39 0.00 35.31 3.99
1377 1530 1.883021 GGGCCATTCCTGTTGAACG 59.117 57.895 4.39 0.00 35.31 3.95
1378 1531 0.608035 TCGGGCCATTCCTGTTGAAC 60.608 55.000 4.39 0.00 42.13 3.18
1379 1532 0.608035 GTCGGGCCATTCCTGTTGAA 60.608 55.000 4.39 0.00 42.13 2.69
1380 1533 1.002624 GTCGGGCCATTCCTGTTGA 60.003 57.895 4.39 0.00 42.13 3.18
1381 1534 1.002134 AGTCGGGCCATTCCTGTTG 60.002 57.895 4.39 0.00 42.13 3.33
1382 1535 1.201429 AGAGTCGGGCCATTCCTGTT 61.201 55.000 4.39 0.00 42.13 3.16
1383 1536 1.613630 AGAGTCGGGCCATTCCTGT 60.614 57.895 4.39 0.00 42.13 4.00
1384 1537 1.144936 GAGAGTCGGGCCATTCCTG 59.855 63.158 4.39 0.00 42.90 3.86
1385 1538 1.002274 AGAGAGTCGGGCCATTCCT 59.998 57.895 4.39 0.00 34.39 3.36
1386 1539 1.144936 CAGAGAGTCGGGCCATTCC 59.855 63.158 4.39 0.00 0.00 3.01
1387 1540 1.144936 CCAGAGAGTCGGGCCATTC 59.855 63.158 4.39 0.00 0.00 2.67
1388 1541 1.201429 AACCAGAGAGTCGGGCCATT 61.201 55.000 4.39 0.00 34.97 3.16
1389 1542 1.613630 AACCAGAGAGTCGGGCCAT 60.614 57.895 4.39 0.00 34.97 4.40
1390 1543 2.203788 AACCAGAGAGTCGGGCCA 60.204 61.111 4.39 0.00 34.97 5.36
1391 1544 1.827399 TTGAACCAGAGAGTCGGGCC 61.827 60.000 0.00 0.00 34.97 5.80
1392 1545 0.670854 GTTGAACCAGAGAGTCGGGC 60.671 60.000 0.00 0.00 34.97 6.13
1393 1546 0.679505 TGTTGAACCAGAGAGTCGGG 59.320 55.000 0.00 0.00 37.75 5.14
1394 1547 1.341531 AGTGTTGAACCAGAGAGTCGG 59.658 52.381 0.00 0.00 0.00 4.79
1395 1548 2.667137 GAGTGTTGAACCAGAGAGTCG 58.333 52.381 0.00 0.00 0.00 4.18
1396 1549 2.034812 ACGAGTGTTGAACCAGAGAGTC 59.965 50.000 0.00 0.00 0.00 3.36
1397 1550 2.032620 ACGAGTGTTGAACCAGAGAGT 58.967 47.619 0.00 0.00 0.00 3.24
1398 1551 2.398498 CACGAGTGTTGAACCAGAGAG 58.602 52.381 0.00 0.00 0.00 3.20
1399 1552 1.068588 CCACGAGTGTTGAACCAGAGA 59.931 52.381 2.36 0.00 0.00 3.10
1400 1553 1.202533 ACCACGAGTGTTGAACCAGAG 60.203 52.381 2.36 0.00 0.00 3.35
1401 1554 0.828022 ACCACGAGTGTTGAACCAGA 59.172 50.000 2.36 0.00 0.00 3.86
1402 1555 0.937304 CACCACGAGTGTTGAACCAG 59.063 55.000 2.36 0.00 41.93 4.00
1403 1556 3.073086 CACCACGAGTGTTGAACCA 57.927 52.632 2.36 0.00 41.93 3.67
1412 1565 1.693627 AACTCAGAGTCACCACGAGT 58.306 50.000 2.72 0.00 38.55 4.18
1413 1566 2.162608 CCTAACTCAGAGTCACCACGAG 59.837 54.545 2.72 0.00 0.00 4.18
1414 1567 2.160205 CCTAACTCAGAGTCACCACGA 58.840 52.381 2.72 0.00 0.00 4.35
1415 1568 1.887198 ACCTAACTCAGAGTCACCACG 59.113 52.381 2.72 0.00 0.00 4.94
1416 1569 2.891580 TGACCTAACTCAGAGTCACCAC 59.108 50.000 2.72 0.00 32.69 4.16
1417 1570 3.157881 CTGACCTAACTCAGAGTCACCA 58.842 50.000 2.72 0.00 40.28 4.17
1418 1571 3.422796 TCTGACCTAACTCAGAGTCACC 58.577 50.000 2.72 0.00 41.49 4.02
1419 1572 5.652994 ATTCTGACCTAACTCAGAGTCAC 57.347 43.478 2.72 0.00 45.86 3.67
1420 1573 6.672266 AAATTCTGACCTAACTCAGAGTCA 57.328 37.500 2.72 0.00 45.86 3.41
1421 1574 6.128418 GCAAAATTCTGACCTAACTCAGAGTC 60.128 42.308 2.72 0.00 45.86 3.36
1422 1575 5.703130 GCAAAATTCTGACCTAACTCAGAGT 59.297 40.000 0.00 0.00 45.86 3.24
1423 1576 5.702670 TGCAAAATTCTGACCTAACTCAGAG 59.297 40.000 0.00 0.00 45.86 3.35
1424 1577 5.470098 GTGCAAAATTCTGACCTAACTCAGA 59.530 40.000 0.00 0.00 44.09 3.27
1425 1578 5.471456 AGTGCAAAATTCTGACCTAACTCAG 59.529 40.000 0.00 0.00 39.35 3.35
1426 1579 5.376625 AGTGCAAAATTCTGACCTAACTCA 58.623 37.500 0.00 0.00 0.00 3.41
1427 1580 5.948992 AGTGCAAAATTCTGACCTAACTC 57.051 39.130 0.00 0.00 0.00 3.01
1428 1581 6.461509 CCAAAGTGCAAAATTCTGACCTAACT 60.462 38.462 0.00 0.00 0.00 2.24
1429 1582 5.691754 CCAAAGTGCAAAATTCTGACCTAAC 59.308 40.000 0.00 0.00 0.00 2.34
1430 1583 5.221422 CCCAAAGTGCAAAATTCTGACCTAA 60.221 40.000 0.00 0.00 0.00 2.69
1431 1584 4.280677 CCCAAAGTGCAAAATTCTGACCTA 59.719 41.667 0.00 0.00 0.00 3.08
1432 1585 3.070015 CCCAAAGTGCAAAATTCTGACCT 59.930 43.478 0.00 0.00 0.00 3.85
1433 1586 3.392882 CCCAAAGTGCAAAATTCTGACC 58.607 45.455 0.00 0.00 0.00 4.02
1434 1587 2.802247 GCCCAAAGTGCAAAATTCTGAC 59.198 45.455 0.00 0.00 0.00 3.51
1435 1588 2.545532 CGCCCAAAGTGCAAAATTCTGA 60.546 45.455 0.00 0.00 0.00 3.27
1436 1589 1.794116 CGCCCAAAGTGCAAAATTCTG 59.206 47.619 0.00 0.00 0.00 3.02
1437 1590 1.686052 TCGCCCAAAGTGCAAAATTCT 59.314 42.857 0.00 0.00 0.00 2.40
1438 1591 2.061028 CTCGCCCAAAGTGCAAAATTC 58.939 47.619 0.00 0.00 0.00 2.17
1439 1592 1.686052 TCTCGCCCAAAGTGCAAAATT 59.314 42.857 0.00 0.00 0.00 1.82
1440 1593 1.327303 TCTCGCCCAAAGTGCAAAAT 58.673 45.000 0.00 0.00 0.00 1.82
1441 1594 1.107114 TTCTCGCCCAAAGTGCAAAA 58.893 45.000 0.00 0.00 0.00 2.44
1442 1595 1.327303 ATTCTCGCCCAAAGTGCAAA 58.673 45.000 0.00 0.00 0.00 3.68
1443 1596 1.000385 CAATTCTCGCCCAAAGTGCAA 60.000 47.619 0.00 0.00 0.00 4.08
1444 1597 0.597568 CAATTCTCGCCCAAAGTGCA 59.402 50.000 0.00 0.00 0.00 4.57
1445 1598 0.109132 CCAATTCTCGCCCAAAGTGC 60.109 55.000 0.00 0.00 0.00 4.40
1446 1599 1.470098 CTCCAATTCTCGCCCAAAGTG 59.530 52.381 0.00 0.00 0.00 3.16
1447 1600 1.614317 CCTCCAATTCTCGCCCAAAGT 60.614 52.381 0.00 0.00 0.00 2.66
1448 1601 1.098050 CCTCCAATTCTCGCCCAAAG 58.902 55.000 0.00 0.00 0.00 2.77
1449 1602 0.404040 ACCTCCAATTCTCGCCCAAA 59.596 50.000 0.00 0.00 0.00 3.28
1450 1603 0.322456 CACCTCCAATTCTCGCCCAA 60.322 55.000 0.00 0.00 0.00 4.12
1451 1604 1.299648 CACCTCCAATTCTCGCCCA 59.700 57.895 0.00 0.00 0.00 5.36
1452 1605 0.744771 GACACCTCCAATTCTCGCCC 60.745 60.000 0.00 0.00 0.00 6.13
1453 1606 0.250513 AGACACCTCCAATTCTCGCC 59.749 55.000 0.00 0.00 0.00 5.54
1454 1607 1.734465 CAAGACACCTCCAATTCTCGC 59.266 52.381 0.00 0.00 0.00 5.03
1455 1608 1.734465 GCAAGACACCTCCAATTCTCG 59.266 52.381 0.00 0.00 0.00 4.04
1456 1609 3.064900 AGCAAGACACCTCCAATTCTC 57.935 47.619 0.00 0.00 0.00 2.87
1457 1610 3.515602 AAGCAAGACACCTCCAATTCT 57.484 42.857 0.00 0.00 0.00 2.40
1458 1611 3.125316 CGTAAGCAAGACACCTCCAATTC 59.875 47.826 0.00 0.00 0.00 2.17
1459 1612 3.074412 CGTAAGCAAGACACCTCCAATT 58.926 45.455 0.00 0.00 0.00 2.32
1460 1613 2.699954 CGTAAGCAAGACACCTCCAAT 58.300 47.619 0.00 0.00 0.00 3.16
1461 1614 2.163818 CGTAAGCAAGACACCTCCAA 57.836 50.000 0.00 0.00 0.00 3.53
1462 1615 3.906660 CGTAAGCAAGACACCTCCA 57.093 52.632 0.00 0.00 0.00 3.86
1482 1635 4.828925 GTCGCTGGAGCTGGGAGC 62.829 72.222 0.00 0.00 42.84 4.70
1483 1636 4.504916 CGTCGCTGGAGCTGGGAG 62.505 72.222 0.00 0.00 39.32 4.30
1486 1639 4.363990 ACACGTCGCTGGAGCTGG 62.364 66.667 0.00 0.00 39.32 4.85
1487 1640 2.755542 AAGACACGTCGCTGGAGCTG 62.756 60.000 0.00 0.00 39.32 4.24
1488 1641 2.565645 AAGACACGTCGCTGGAGCT 61.566 57.895 0.00 0.00 39.32 4.09
1489 1642 2.049063 AAGACACGTCGCTGGAGC 60.049 61.111 0.00 0.00 37.78 4.70
1490 1643 2.375766 GCAAGACACGTCGCTGGAG 61.376 63.158 0.00 0.00 34.09 3.86
1491 1644 2.355837 GCAAGACACGTCGCTGGA 60.356 61.111 0.00 0.00 34.09 3.86
1492 1645 0.735978 TATGCAAGACACGTCGCTGG 60.736 55.000 0.00 0.00 34.09 4.85
1493 1646 1.280982 ATATGCAAGACACGTCGCTG 58.719 50.000 0.00 0.00 34.09 5.18
1494 1647 1.660607 CAATATGCAAGACACGTCGCT 59.339 47.619 0.00 0.00 34.09 4.93
1495 1648 1.852077 GCAATATGCAAGACACGTCGC 60.852 52.381 0.00 0.00 44.26 5.19
1496 1649 1.589731 CGCAATATGCAAGACACGTCG 60.590 52.381 2.99 0.00 45.36 5.12
1497 1650 1.393539 ACGCAATATGCAAGACACGTC 59.606 47.619 2.99 0.00 45.36 4.34
1498 1651 1.393539 GACGCAATATGCAAGACACGT 59.606 47.619 7.08 7.08 45.36 4.49
1499 1652 1.589731 CGACGCAATATGCAAGACACG 60.590 52.381 2.99 0.00 45.36 4.49
1500 1653 1.658596 TCGACGCAATATGCAAGACAC 59.341 47.619 2.99 0.00 45.36 3.67
1501 1654 2.003196 TCGACGCAATATGCAAGACA 57.997 45.000 2.99 0.00 45.36 3.41
1502 1655 2.896289 CATCGACGCAATATGCAAGAC 58.104 47.619 2.99 0.00 45.36 3.01
1503 1656 1.261354 GCATCGACGCAATATGCAAGA 59.739 47.619 12.75 0.00 45.36 3.02
1504 1657 1.661178 GGCATCGACGCAATATGCAAG 60.661 52.381 17.65 0.00 45.36 4.01
1505 1658 0.307453 GGCATCGACGCAATATGCAA 59.693 50.000 17.65 0.00 45.36 4.08
1506 1659 0.813210 TGGCATCGACGCAATATGCA 60.813 50.000 17.65 0.00 45.36 3.96
1507 1660 0.307453 TTGGCATCGACGCAATATGC 59.693 50.000 5.59 9.97 44.16 3.14
1508 1661 1.069703 CCTTGGCATCGACGCAATATG 60.070 52.381 5.59 0.00 0.00 1.78
1509 1662 1.229428 CCTTGGCATCGACGCAATAT 58.771 50.000 5.59 0.00 0.00 1.28
1510 1663 0.813610 CCCTTGGCATCGACGCAATA 60.814 55.000 5.59 0.00 0.00 1.90
1511 1664 2.114670 CCCTTGGCATCGACGCAAT 61.115 57.895 5.59 0.00 0.00 3.56
1512 1665 2.173758 TACCCTTGGCATCGACGCAA 62.174 55.000 5.59 0.00 0.00 4.85
1513 1666 2.651105 TACCCTTGGCATCGACGCA 61.651 57.895 5.59 0.00 0.00 5.24
1514 1667 2.171725 GTACCCTTGGCATCGACGC 61.172 63.158 0.00 0.00 0.00 5.19
1515 1668 1.082117 GTGTACCCTTGGCATCGACG 61.082 60.000 0.00 0.00 0.00 5.12
1516 1669 1.082117 CGTGTACCCTTGGCATCGAC 61.082 60.000 0.00 0.00 0.00 4.20
1517 1670 1.216977 CGTGTACCCTTGGCATCGA 59.783 57.895 0.00 0.00 0.00 3.59
1518 1671 0.179084 ATCGTGTACCCTTGGCATCG 60.179 55.000 0.00 0.00 0.00 3.84
1519 1672 1.134521 TCATCGTGTACCCTTGGCATC 60.135 52.381 0.00 0.00 0.00 3.91
1520 1673 0.908910 TCATCGTGTACCCTTGGCAT 59.091 50.000 0.00 0.00 0.00 4.40
1521 1674 0.036765 GTCATCGTGTACCCTTGGCA 60.037 55.000 0.00 0.00 0.00 4.92
1522 1675 1.082117 CGTCATCGTGTACCCTTGGC 61.082 60.000 0.00 0.00 0.00 4.52
1523 1676 3.044809 CGTCATCGTGTACCCTTGG 57.955 57.895 0.00 0.00 0.00 3.61
1534 1687 2.386491 CACGCGAACACGTCATCG 59.614 61.111 15.93 13.60 46.34 3.84
1535 1688 2.093983 GCACGCGAACACGTCATC 59.906 61.111 15.93 0.00 46.34 2.92
1536 1689 2.241190 TTGCACGCGAACACGTCAT 61.241 52.632 15.93 0.00 46.34 3.06
1537 1690 2.886124 TTGCACGCGAACACGTCA 60.886 55.556 15.93 0.00 46.34 4.35
1538 1691 2.356093 AAGTTGCACGCGAACACGTC 62.356 55.000 15.93 3.81 46.34 4.34
1540 1693 1.297304 AAAGTTGCACGCGAACACG 60.297 52.632 15.93 0.00 39.50 4.49
1541 1694 0.247894 TCAAAGTTGCACGCGAACAC 60.248 50.000 15.93 3.49 0.00 3.32
1542 1695 0.660488 ATCAAAGTTGCACGCGAACA 59.340 45.000 15.93 7.56 0.00 3.18
1543 1696 1.708680 GAATCAAAGTTGCACGCGAAC 59.291 47.619 15.93 7.16 0.00 3.95
1544 1697 1.332065 TGAATCAAAGTTGCACGCGAA 59.668 42.857 15.93 0.00 0.00 4.70
1545 1698 0.940833 TGAATCAAAGTTGCACGCGA 59.059 45.000 15.93 0.00 0.00 5.87
1546 1699 1.069973 TCTGAATCAAAGTTGCACGCG 60.070 47.619 3.53 3.53 0.00 6.01
1547 1700 2.686558 TCTGAATCAAAGTTGCACGC 57.313 45.000 0.00 0.00 0.00 5.34
1548 1701 4.786507 TGAATCTGAATCAAAGTTGCACG 58.213 39.130 0.00 0.00 0.00 5.34
1549 1702 6.211515 AGTTGAATCTGAATCAAAGTTGCAC 58.788 36.000 9.58 0.00 38.44 4.57
1550 1703 6.395426 AGTTGAATCTGAATCAAAGTTGCA 57.605 33.333 9.58 0.00 38.44 4.08
1551 1704 8.694394 GTTAAGTTGAATCTGAATCAAAGTTGC 58.306 33.333 9.58 0.00 38.44 4.17
1552 1705 9.185192 GGTTAAGTTGAATCTGAATCAAAGTTG 57.815 33.333 9.58 0.00 38.44 3.16
1553 1706 9.136323 AGGTTAAGTTGAATCTGAATCAAAGTT 57.864 29.630 9.58 8.96 38.44 2.66
1554 1707 8.697507 AGGTTAAGTTGAATCTGAATCAAAGT 57.302 30.769 9.58 4.07 38.44 2.66
1555 1708 9.971922 AAAGGTTAAGTTGAATCTGAATCAAAG 57.028 29.630 9.58 0.00 38.44 2.77
1557 1710 9.748708 CAAAAGGTTAAGTTGAATCTGAATCAA 57.251 29.630 4.09 4.09 34.56 2.57
1558 1711 8.359642 CCAAAAGGTTAAGTTGAATCTGAATCA 58.640 33.333 0.00 0.00 0.00 2.57
1559 1712 7.329471 GCCAAAAGGTTAAGTTGAATCTGAATC 59.671 37.037 0.00 0.00 0.00 2.52
1560 1713 7.154656 GCCAAAAGGTTAAGTTGAATCTGAAT 58.845 34.615 0.00 0.00 0.00 2.57
1561 1714 6.097554 TGCCAAAAGGTTAAGTTGAATCTGAA 59.902 34.615 0.00 0.00 0.00 3.02
1562 1715 5.596361 TGCCAAAAGGTTAAGTTGAATCTGA 59.404 36.000 0.00 0.00 0.00 3.27
1563 1716 5.841810 TGCCAAAAGGTTAAGTTGAATCTG 58.158 37.500 0.00 0.00 0.00 2.90
1564 1717 6.478512 TTGCCAAAAGGTTAAGTTGAATCT 57.521 33.333 0.00 0.00 0.00 2.40
1565 1718 8.303876 TCTATTGCCAAAAGGTTAAGTTGAATC 58.696 33.333 0.00 0.00 0.00 2.52
1566 1719 8.189119 TCTATTGCCAAAAGGTTAAGTTGAAT 57.811 30.769 0.00 0.00 0.00 2.57
1567 1720 7.589958 TCTATTGCCAAAAGGTTAAGTTGAA 57.410 32.000 0.00 0.00 0.00 2.69
1568 1721 7.775053 ATCTATTGCCAAAAGGTTAAGTTGA 57.225 32.000 0.00 0.00 0.00 3.18
1569 1722 9.573133 CTAATCTATTGCCAAAAGGTTAAGTTG 57.427 33.333 0.00 0.00 0.00 3.16
1570 1723 9.309224 ACTAATCTATTGCCAAAAGGTTAAGTT 57.691 29.630 0.00 0.00 0.00 2.66
1571 1724 8.739972 CACTAATCTATTGCCAAAAGGTTAAGT 58.260 33.333 0.00 0.00 0.00 2.24
1572 1725 7.702348 GCACTAATCTATTGCCAAAAGGTTAAG 59.298 37.037 0.00 0.00 0.00 1.85
1573 1726 7.177568 TGCACTAATCTATTGCCAAAAGGTTAA 59.822 33.333 0.00 0.00 33.89 2.01
1574 1727 6.661377 TGCACTAATCTATTGCCAAAAGGTTA 59.339 34.615 0.00 0.00 33.89 2.85
1575 1728 5.480073 TGCACTAATCTATTGCCAAAAGGTT 59.520 36.000 0.00 0.00 33.89 3.50
1576 1729 5.016173 TGCACTAATCTATTGCCAAAAGGT 58.984 37.500 0.00 0.00 33.89 3.50
1577 1730 5.581126 TGCACTAATCTATTGCCAAAAGG 57.419 39.130 0.00 0.00 33.89 3.11
1578 1731 6.038356 CCTTGCACTAATCTATTGCCAAAAG 58.962 40.000 0.00 0.00 33.89 2.27
1579 1732 5.624281 GCCTTGCACTAATCTATTGCCAAAA 60.624 40.000 0.00 0.00 33.89 2.44
1580 1733 4.142182 GCCTTGCACTAATCTATTGCCAAA 60.142 41.667 0.00 0.00 33.89 3.28
1581 1734 3.381272 GCCTTGCACTAATCTATTGCCAA 59.619 43.478 0.00 0.00 33.89 4.52
1582 1735 2.951642 GCCTTGCACTAATCTATTGCCA 59.048 45.455 0.00 0.00 33.89 4.92
1583 1736 3.217626 AGCCTTGCACTAATCTATTGCC 58.782 45.455 0.00 0.00 33.89 4.52
1584 1737 4.604976 CAAGCCTTGCACTAATCTATTGC 58.395 43.478 0.00 0.00 35.22 3.56
1598 1751 1.884579 ACAATCACTCTGCAAGCCTTG 59.115 47.619 0.00 0.00 0.00 3.61
1599 1752 2.157738 GACAATCACTCTGCAAGCCTT 58.842 47.619 0.00 0.00 0.00 4.35
1600 1753 1.612726 GGACAATCACTCTGCAAGCCT 60.613 52.381 0.00 0.00 0.00 4.58
1601 1754 0.807496 GGACAATCACTCTGCAAGCC 59.193 55.000 0.00 0.00 0.00 4.35
1602 1755 0.807496 GGGACAATCACTCTGCAAGC 59.193 55.000 0.00 0.00 0.00 4.01
1603 1756 1.081892 CGGGACAATCACTCTGCAAG 58.918 55.000 0.00 0.00 0.00 4.01
1604 1757 0.955428 GCGGGACAATCACTCTGCAA 60.955 55.000 0.00 0.00 0.00 4.08
1605 1758 1.375908 GCGGGACAATCACTCTGCA 60.376 57.895 0.00 0.00 0.00 4.41
1606 1759 1.078848 AGCGGGACAATCACTCTGC 60.079 57.895 0.00 0.00 0.00 4.26
1607 1760 0.247460 TCAGCGGGACAATCACTCTG 59.753 55.000 0.00 0.00 0.00 3.35
1608 1761 1.198713 ATCAGCGGGACAATCACTCT 58.801 50.000 0.00 0.00 0.00 3.24
1609 1762 2.362397 TCTATCAGCGGGACAATCACTC 59.638 50.000 0.00 0.00 0.00 3.51
1610 1763 2.388735 TCTATCAGCGGGACAATCACT 58.611 47.619 0.00 0.00 0.00 3.41
1611 1764 2.890808 TCTATCAGCGGGACAATCAC 57.109 50.000 0.00 0.00 0.00 3.06
1612 1765 2.548707 GCATCTATCAGCGGGACAATCA 60.549 50.000 0.00 0.00 0.00 2.57
1613 1766 2.072298 GCATCTATCAGCGGGACAATC 58.928 52.381 0.00 0.00 0.00 2.67
1614 1767 1.696336 AGCATCTATCAGCGGGACAAT 59.304 47.619 0.00 0.00 35.48 2.71
1615 1768 1.123077 AGCATCTATCAGCGGGACAA 58.877 50.000 0.00 0.00 35.48 3.18
1616 1769 0.390492 CAGCATCTATCAGCGGGACA 59.610 55.000 0.00 0.00 35.48 4.02
1617 1770 0.390860 ACAGCATCTATCAGCGGGAC 59.609 55.000 0.00 0.00 35.48 4.46
1618 1771 1.123077 AACAGCATCTATCAGCGGGA 58.877 50.000 0.00 0.00 35.48 5.14
1619 1772 1.224075 CAACAGCATCTATCAGCGGG 58.776 55.000 0.00 0.00 35.48 6.13
1620 1773 1.202568 TCCAACAGCATCTATCAGCGG 60.203 52.381 0.00 0.00 35.48 5.52
1621 1774 2.229675 TCCAACAGCATCTATCAGCG 57.770 50.000 0.00 0.00 35.48 5.18
1622 1775 3.497640 GTGATCCAACAGCATCTATCAGC 59.502 47.826 0.00 0.00 0.00 4.26
1623 1776 4.700700 TGTGATCCAACAGCATCTATCAG 58.299 43.478 0.00 0.00 0.00 2.90
1624 1777 4.406649 TCTGTGATCCAACAGCATCTATCA 59.593 41.667 8.06 0.00 45.93 2.15
1625 1778 4.953667 TCTGTGATCCAACAGCATCTATC 58.046 43.478 8.06 0.00 45.93 2.08
1626 1779 5.563876 ATCTGTGATCCAACAGCATCTAT 57.436 39.130 8.06 0.00 45.93 1.98
1627 1780 5.104817 TGAATCTGTGATCCAACAGCATCTA 60.105 40.000 8.06 0.00 45.93 1.98
1628 1781 3.928005 ATCTGTGATCCAACAGCATCT 57.072 42.857 8.06 0.00 45.93 2.90
1629 1782 3.943381 TGAATCTGTGATCCAACAGCATC 59.057 43.478 8.06 8.80 45.93 3.91
1630 1783 3.959293 TGAATCTGTGATCCAACAGCAT 58.041 40.909 8.06 0.71 45.93 3.79
1631 1784 3.421919 TGAATCTGTGATCCAACAGCA 57.578 42.857 8.06 0.00 45.93 4.41
1632 1785 3.755378 AGTTGAATCTGTGATCCAACAGC 59.245 43.478 11.15 0.00 45.93 4.40
1634 1787 6.533730 AGTAAGTTGAATCTGTGATCCAACA 58.466 36.000 11.15 0.00 39.44 3.33
1635 1788 6.092807 GGAGTAAGTTGAATCTGTGATCCAAC 59.907 42.308 2.18 2.18 37.84 3.77
1636 1789 6.013379 AGGAGTAAGTTGAATCTGTGATCCAA 60.013 38.462 0.00 0.00 0.00 3.53
1637 1790 5.485353 AGGAGTAAGTTGAATCTGTGATCCA 59.515 40.000 0.00 0.00 0.00 3.41
1638 1791 5.814705 CAGGAGTAAGTTGAATCTGTGATCC 59.185 44.000 0.00 0.00 0.00 3.36
1639 1792 6.634805 TCAGGAGTAAGTTGAATCTGTGATC 58.365 40.000 0.00 0.00 0.00 2.92
1640 1793 6.611613 TCAGGAGTAAGTTGAATCTGTGAT 57.388 37.500 0.00 0.00 0.00 3.06
1641 1794 6.419484 TTCAGGAGTAAGTTGAATCTGTGA 57.581 37.500 0.00 0.00 0.00 3.58
1642 1795 7.678947 AATTCAGGAGTAAGTTGAATCTGTG 57.321 36.000 0.05 0.00 39.82 3.66
1643 1796 9.965902 ATAAATTCAGGAGTAAGTTGAATCTGT 57.034 29.630 0.05 0.00 39.82 3.41
1671 1824 9.461312 AGTAATGCAGTTAAAGTGGATTCAATA 57.539 29.630 8.54 0.00 38.60 1.90
1672 1825 8.353423 AGTAATGCAGTTAAAGTGGATTCAAT 57.647 30.769 8.54 0.00 38.60 2.57
1673 1826 7.446931 TGAGTAATGCAGTTAAAGTGGATTCAA 59.553 33.333 8.54 0.00 38.60 2.69
1674 1827 6.939730 TGAGTAATGCAGTTAAAGTGGATTCA 59.060 34.615 8.54 1.13 38.60 2.57
1675 1828 7.377766 TGAGTAATGCAGTTAAAGTGGATTC 57.622 36.000 8.54 3.42 38.60 2.52
1676 1829 7.944729 ATGAGTAATGCAGTTAAAGTGGATT 57.055 32.000 0.00 9.76 41.49 3.01
1677 1830 8.486210 TCTATGAGTAATGCAGTTAAAGTGGAT 58.514 33.333 0.00 0.00 30.44 3.41
1678 1831 7.847096 TCTATGAGTAATGCAGTTAAAGTGGA 58.153 34.615 0.00 0.00 0.00 4.02
1679 1832 7.766278 ACTCTATGAGTAATGCAGTTAAAGTGG 59.234 37.037 0.00 0.00 41.51 4.00
1680 1833 8.709386 ACTCTATGAGTAATGCAGTTAAAGTG 57.291 34.615 0.00 0.00 41.51 3.16
1681 1834 9.804758 GTACTCTATGAGTAATGCAGTTAAAGT 57.195 33.333 8.75 0.00 45.12 2.66
1682 1835 9.803315 TGTACTCTATGAGTAATGCAGTTAAAG 57.197 33.333 8.75 0.00 45.12 1.85
1683 1836 9.582431 GTGTACTCTATGAGTAATGCAGTTAAA 57.418 33.333 8.75 0.00 45.12 1.52
1684 1837 8.745590 TGTGTACTCTATGAGTAATGCAGTTAA 58.254 33.333 8.75 0.00 45.12 2.01
1685 1838 8.288689 TGTGTACTCTATGAGTAATGCAGTTA 57.711 34.615 8.75 0.00 45.12 2.24
1686 1839 7.170393 TGTGTACTCTATGAGTAATGCAGTT 57.830 36.000 8.75 0.00 45.12 3.16
1687 1840 6.775594 TGTGTACTCTATGAGTAATGCAGT 57.224 37.500 8.75 0.00 45.12 4.40
1688 1841 8.654230 AATTGTGTACTCTATGAGTAATGCAG 57.346 34.615 8.75 0.00 45.12 4.41
1689 1842 7.710907 GGAATTGTGTACTCTATGAGTAATGCA 59.289 37.037 8.75 0.00 45.12 3.96
1690 1843 7.928706 AGGAATTGTGTACTCTATGAGTAATGC 59.071 37.037 8.75 1.01 45.12 3.56
1691 1844 9.254133 CAGGAATTGTGTACTCTATGAGTAATG 57.746 37.037 8.75 0.00 45.12 1.90
1692 1845 9.201989 TCAGGAATTGTGTACTCTATGAGTAAT 57.798 33.333 8.75 0.00 45.12 1.89
1693 1846 8.589701 TCAGGAATTGTGTACTCTATGAGTAA 57.410 34.615 8.75 0.00 45.12 2.24
1694 1847 8.589701 TTCAGGAATTGTGTACTCTATGAGTA 57.410 34.615 3.59 3.59 41.51 2.59
1695 1848 7.482169 TTCAGGAATTGTGTACTCTATGAGT 57.518 36.000 5.53 5.53 45.54 3.41
1696 1849 8.954950 AATTCAGGAATTGTGTACTCTATGAG 57.045 34.615 6.46 0.00 39.36 2.90
1697 1850 9.383519 GAAATTCAGGAATTGTGTACTCTATGA 57.616 33.333 7.94 0.00 40.57 2.15
1698 1851 8.616076 GGAAATTCAGGAATTGTGTACTCTATG 58.384 37.037 7.94 0.00 40.57 2.23
1699 1852 7.775561 GGGAAATTCAGGAATTGTGTACTCTAT 59.224 37.037 7.94 0.00 40.57 1.98
1700 1853 7.037586 AGGGAAATTCAGGAATTGTGTACTCTA 60.038 37.037 7.94 0.00 40.57 2.43
1701 1854 5.946377 GGGAAATTCAGGAATTGTGTACTCT 59.054 40.000 7.94 0.00 40.57 3.24
1702 1855 5.946377 AGGGAAATTCAGGAATTGTGTACTC 59.054 40.000 7.94 1.66 40.57 2.59
1703 1856 5.892348 AGGGAAATTCAGGAATTGTGTACT 58.108 37.500 7.94 1.40 40.57 2.73
1704 1857 5.710099 TGAGGGAAATTCAGGAATTGTGTAC 59.290 40.000 7.94 0.00 40.57 2.90
1705 1858 5.710099 GTGAGGGAAATTCAGGAATTGTGTA 59.290 40.000 7.94 0.00 40.57 2.90
1706 1859 4.524328 GTGAGGGAAATTCAGGAATTGTGT 59.476 41.667 7.94 0.00 40.57 3.72
1707 1860 4.082026 GGTGAGGGAAATTCAGGAATTGTG 60.082 45.833 7.94 0.00 40.57 3.33
1708 1861 4.089361 GGTGAGGGAAATTCAGGAATTGT 58.911 43.478 7.94 0.00 40.57 2.71
1709 1862 3.448660 GGGTGAGGGAAATTCAGGAATTG 59.551 47.826 7.94 0.00 40.57 2.32
1710 1863 3.337909 AGGGTGAGGGAAATTCAGGAATT 59.662 43.478 1.50 1.50 42.35 2.17
1711 1864 2.929043 AGGGTGAGGGAAATTCAGGAAT 59.071 45.455 0.00 0.00 0.00 3.01
1712 1865 2.358258 AGGGTGAGGGAAATTCAGGAA 58.642 47.619 0.00 0.00 0.00 3.36
1713 1866 2.059756 AGGGTGAGGGAAATTCAGGA 57.940 50.000 0.00 0.00 0.00 3.86
1714 1867 2.621668 GGAAGGGTGAGGGAAATTCAGG 60.622 54.545 0.00 0.00 0.00 3.86
1715 1868 2.621668 GGGAAGGGTGAGGGAAATTCAG 60.622 54.545 0.00 0.00 0.00 3.02
1716 1869 1.357761 GGGAAGGGTGAGGGAAATTCA 59.642 52.381 0.00 0.00 0.00 2.57
1717 1870 1.641192 AGGGAAGGGTGAGGGAAATTC 59.359 52.381 0.00 0.00 0.00 2.17
1718 1871 1.773541 AGGGAAGGGTGAGGGAAATT 58.226 50.000 0.00 0.00 0.00 1.82
1719 1872 2.226170 ACTAGGGAAGGGTGAGGGAAAT 60.226 50.000 0.00 0.00 0.00 2.17
1720 1873 1.153565 ACTAGGGAAGGGTGAGGGAAA 59.846 52.381 0.00 0.00 0.00 3.13
1721 1874 0.797579 ACTAGGGAAGGGTGAGGGAA 59.202 55.000 0.00 0.00 0.00 3.97
1722 1875 0.338814 GACTAGGGAAGGGTGAGGGA 59.661 60.000 0.00 0.00 0.00 4.20
1723 1876 0.042731 TGACTAGGGAAGGGTGAGGG 59.957 60.000 0.00 0.00 0.00 4.30
1724 1877 2.182516 ATGACTAGGGAAGGGTGAGG 57.817 55.000 0.00 0.00 0.00 3.86
1725 1878 3.643237 TGTATGACTAGGGAAGGGTGAG 58.357 50.000 0.00 0.00 0.00 3.51
1726 1879 3.769189 TGTATGACTAGGGAAGGGTGA 57.231 47.619 0.00 0.00 0.00 4.02
1727 1880 3.432326 GCTTGTATGACTAGGGAAGGGTG 60.432 52.174 0.00 0.00 0.00 4.61
1728 1881 2.772515 GCTTGTATGACTAGGGAAGGGT 59.227 50.000 0.00 0.00 0.00 4.34
1729 1882 3.041946 AGCTTGTATGACTAGGGAAGGG 58.958 50.000 0.00 0.00 0.00 3.95
1730 1883 3.070302 GGAGCTTGTATGACTAGGGAAGG 59.930 52.174 0.00 0.00 0.00 3.46
1731 1884 3.070302 GGGAGCTTGTATGACTAGGGAAG 59.930 52.174 0.00 0.00 0.00 3.46
1732 1885 3.039011 GGGAGCTTGTATGACTAGGGAA 58.961 50.000 0.00 0.00 0.00 3.97
1733 1886 2.679082 GGGAGCTTGTATGACTAGGGA 58.321 52.381 0.00 0.00 0.00 4.20
1734 1887 1.694696 GGGGAGCTTGTATGACTAGGG 59.305 57.143 0.00 0.00 0.00 3.53
1735 1888 2.683768 AGGGGAGCTTGTATGACTAGG 58.316 52.381 0.00 0.00 0.00 3.02
1736 1889 3.706594 TCAAGGGGAGCTTGTATGACTAG 59.293 47.826 0.00 0.00 33.84 2.57
1737 1890 3.719871 TCAAGGGGAGCTTGTATGACTA 58.280 45.455 0.00 0.00 33.84 2.59
1738 1891 2.551270 TCAAGGGGAGCTTGTATGACT 58.449 47.619 0.00 0.00 33.84 3.41
1739 1892 3.350219 TTCAAGGGGAGCTTGTATGAC 57.650 47.619 0.00 0.00 33.84 3.06
1740 1893 4.272489 CAATTCAAGGGGAGCTTGTATGA 58.728 43.478 0.00 0.00 33.84 2.15
1753 1906 1.672881 GGCAGTCGATCCAATTCAAGG 59.327 52.381 0.00 0.00 0.00 3.61
1757 1910 1.401905 GGTTGGCAGTCGATCCAATTC 59.598 52.381 16.26 10.32 43.43 2.17
1811 1964 0.251354 TCCAGGCAGAGAAGCATCAC 59.749 55.000 0.00 0.00 35.83 3.06
1847 2000 0.954452 CCCTCCATTTTGCGCCTATC 59.046 55.000 4.18 0.00 0.00 2.08
1854 2007 5.450550 GCACTTAATACTCCCTCCATTTTGC 60.451 44.000 0.00 0.00 0.00 3.68
1881 2034 6.070881 TGCTTGGGTTTAATATGTGAGCAATT 60.071 34.615 0.00 0.00 34.99 2.32
1882 2035 5.421693 TGCTTGGGTTTAATATGTGAGCAAT 59.578 36.000 0.00 0.00 34.99 3.56
1883 2036 4.769488 TGCTTGGGTTTAATATGTGAGCAA 59.231 37.500 0.00 0.00 34.99 3.91
1884 2037 4.339748 TGCTTGGGTTTAATATGTGAGCA 58.660 39.130 0.00 0.00 35.49 4.26
1885 2038 4.981806 TGCTTGGGTTTAATATGTGAGC 57.018 40.909 0.00 0.00 0.00 4.26
1886 2039 6.324819 CAGTTGCTTGGGTTTAATATGTGAG 58.675 40.000 0.00 0.00 0.00 3.51
1887 2040 5.336372 GCAGTTGCTTGGGTTTAATATGTGA 60.336 40.000 0.00 0.00 38.21 3.58
1888 2041 4.864247 GCAGTTGCTTGGGTTTAATATGTG 59.136 41.667 0.00 0.00 38.21 3.21
1932 2085 1.065928 GGAAGCTGCTGCATCATGC 59.934 57.895 20.14 1.35 45.29 4.06
1962 2115 5.978814 AGTATGTCTTGATCCACTGTTACC 58.021 41.667 0.00 0.00 0.00 2.85
1983 2136 6.938030 CGTTTAGATCTCTATACCCTCTGAGT 59.062 42.308 0.00 0.00 30.04 3.41
1987 2140 5.883180 AGCGTTTAGATCTCTATACCCTCT 58.117 41.667 0.00 0.00 30.04 3.69
1988 2141 6.578163 AAGCGTTTAGATCTCTATACCCTC 57.422 41.667 0.00 0.00 30.04 4.30
1989 2142 6.980416 AAAGCGTTTAGATCTCTATACCCT 57.020 37.500 0.00 0.00 30.04 4.34
2027 2211 8.204836 AGTAACATTGTTGTCATATACTCCCTC 58.795 37.037 12.30 0.00 34.06 4.30
2048 2232 5.801350 TGCTGATAGTTCATGCAAGTAAC 57.199 39.130 0.00 0.00 34.93 2.50
2049 2233 6.678655 GCATTGCTGATAGTTCATGCAAGTAA 60.679 38.462 0.16 0.00 43.08 2.24
2057 2241 3.589951 AGGGCATTGCTGATAGTTCAT 57.410 42.857 8.82 0.00 0.00 2.57
2089 2273 3.132925 CAGACACCCAAAATTTTGCCTG 58.867 45.455 22.90 20.00 36.86 4.85
2212 2421 2.033299 CGTTGTTGTGGAAGCAGTTCAT 59.967 45.455 0.00 0.00 33.93 2.57
2227 2436 2.604174 GCGTGCTACTGCCGTTGTT 61.604 57.895 0.00 0.00 38.71 2.83
2244 2453 3.815401 GGGATCTGTATTGTGTACATGGC 59.185 47.826 0.00 0.00 0.00 4.40
2245 2454 4.058124 CGGGATCTGTATTGTGTACATGG 58.942 47.826 0.00 0.00 0.00 3.66
2266 2475 0.609131 ACACTGGAAGGGGAATTGCG 60.609 55.000 0.00 0.00 46.65 4.85
2295 2504 5.126779 GTCTTAGGAGATGAAATGTTCCCC 58.873 45.833 0.00 0.00 33.70 4.81
2296 2505 5.745227 TGTCTTAGGAGATGAAATGTTCCC 58.255 41.667 0.00 0.00 33.70 3.97
2303 2512 7.067496 ACTGAAGTTGTCTTAGGAGATGAAA 57.933 36.000 0.00 0.00 33.70 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.