Multiple sequence alignment - TraesCS7A01G215500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G215500 chr7A 100.000 2783 0 0 1 2783 181694869 181697651 0.000000e+00 5140.0
1 TraesCS7A01G215500 chr7A 100.000 452 0 0 3223 3674 181698091 181698542 0.000000e+00 835.0
2 TraesCS7A01G215500 chr7A 96.552 58 2 0 13 70 733028351 733028408 3.020000e-16 97.1
3 TraesCS7A01G215500 chr7D 94.384 2208 86 10 580 2783 177876187 177878360 0.000000e+00 3356.0
4 TraesCS7A01G215500 chr7D 89.760 459 39 6 3223 3674 116429753 116430210 6.840000e-162 580.0
5 TraesCS7A01G215500 chr7D 90.215 419 22 12 191 592 177875584 177876000 2.510000e-146 529.0
6 TraesCS7A01G215500 chr7D 75.080 313 70 7 1096 1407 591207001 591207306 4.950000e-29 139.0
7 TraesCS7A01G215500 chr7B 94.038 1409 47 9 1379 2783 143810451 143811826 0.000000e+00 2102.0
8 TraesCS7A01G215500 chr7B 91.683 998 40 13 386 1383 143807680 143808634 0.000000e+00 1343.0
9 TraesCS7A01G215500 chr3A 78.123 1641 253 63 1024 2631 46584089 46582522 0.000000e+00 944.0
10 TraesCS7A01G215500 chr2A 86.458 672 58 15 1997 2651 682634579 682633924 0.000000e+00 706.0
11 TraesCS7A01G215500 chr2A 83.619 641 94 6 2018 2649 9388819 9389457 3.160000e-165 592.0
12 TraesCS7A01G215500 chr2A 83.463 641 95 6 2018 2649 9841595 9842233 1.470000e-163 586.0
13 TraesCS7A01G215500 chr2A 76.316 342 68 11 1105 1443 2655926 2656257 1.750000e-38 171.0
14 TraesCS7A01G215500 chr2A 88.636 88 10 0 1089 1176 9137622 9137535 1.400000e-19 108.0
15 TraesCS7A01G215500 chr2D 79.721 932 172 11 1017 1941 9884589 9883668 0.000000e+00 658.0
16 TraesCS7A01G215500 chr2D 89.890 455 35 8 3223 3671 646302004 646302453 3.180000e-160 575.0
17 TraesCS7A01G215500 chr2D 89.107 459 43 4 3223 3674 192198763 192198305 6.890000e-157 564.0
18 TraesCS7A01G215500 chr2D 88.961 462 38 12 3223 3674 642132187 642131729 3.200000e-155 558.0
19 TraesCS7A01G215500 chr2D 78.063 351 65 9 1096 1443 3084632 3084291 1.030000e-50 211.0
20 TraesCS7A01G215500 chr4D 90.570 456 36 4 3223 3673 329286074 329286527 6.790000e-167 597.0
21 TraesCS7A01G215500 chr1D 90.372 457 37 5 3223 3674 351512031 351512485 8.780000e-166 593.0
22 TraesCS7A01G215500 chr5B 89.910 446 38 5 3223 3663 308535640 308536083 5.320000e-158 568.0
23 TraesCS7A01G215500 chr5D 89.709 447 40 4 3233 3674 463081776 463082221 1.920000e-157 566.0
24 TraesCS7A01G215500 chr5D 89.059 457 45 3 3223 3674 337687515 337687059 2.480000e-156 562.0
25 TraesCS7A01G215500 chr5D 75.969 258 58 4 1188 1443 560790126 560790381 2.980000e-26 130.0
26 TraesCS7A01G215500 chr2B 77.364 349 71 5 1096 1443 7643188 7643529 2.240000e-47 200.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G215500 chr7A 181694869 181698542 3673 False 2987.5 5140 100.0000 1 3674 2 chr7A.!!$F2 3673
1 TraesCS7A01G215500 chr7D 177875584 177878360 2776 False 1942.5 3356 92.2995 191 2783 2 chr7D.!!$F3 2592
2 TraesCS7A01G215500 chr7B 143807680 143811826 4146 False 1722.5 2102 92.8605 386 2783 2 chr7B.!!$F1 2397
3 TraesCS7A01G215500 chr3A 46582522 46584089 1567 True 944.0 944 78.1230 1024 2631 1 chr3A.!!$R1 1607
4 TraesCS7A01G215500 chr2A 682633924 682634579 655 True 706.0 706 86.4580 1997 2651 1 chr2A.!!$R2 654
5 TraesCS7A01G215500 chr2A 9388819 9389457 638 False 592.0 592 83.6190 2018 2649 1 chr2A.!!$F2 631
6 TraesCS7A01G215500 chr2A 9841595 9842233 638 False 586.0 586 83.4630 2018 2649 1 chr2A.!!$F3 631
7 TraesCS7A01G215500 chr2D 9883668 9884589 921 True 658.0 658 79.7210 1017 1941 1 chr2D.!!$R2 924

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
355 356 0.606604 GTTGGACCGAAGACCAGCTA 59.393 55.0 0.0 0.0 35.63 3.32 F
1845 3905 0.318762 GAGACAACGAGGACCTGCTT 59.681 55.0 0.0 0.0 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1902 3962 0.599466 AGATGACGGCGCTGATGATG 60.599 55.0 25.98 0.0 0.0 3.07 R
3471 5559 0.030603 GAGGGGAGGAGGAGGTGATT 60.031 60.0 0.00 0.0 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.748083 CCATTGTGTAGATAGGCATGCT 58.252 45.455 18.92 6.26 0.00 3.79
22 23 4.139786 CCATTGTGTAGATAGGCATGCTT 58.860 43.478 18.92 13.45 0.00 3.91
23 24 4.581824 CCATTGTGTAGATAGGCATGCTTT 59.418 41.667 18.92 9.04 0.00 3.51
24 25 5.764686 CCATTGTGTAGATAGGCATGCTTTA 59.235 40.000 18.92 11.07 0.00 1.85
25 26 6.262944 CCATTGTGTAGATAGGCATGCTTTAA 59.737 38.462 18.92 0.00 0.00 1.52
26 27 7.201812 CCATTGTGTAGATAGGCATGCTTTAAA 60.202 37.037 18.92 0.00 0.00 1.52
27 28 6.925610 TGTGTAGATAGGCATGCTTTAAAG 57.074 37.500 18.92 11.02 0.00 1.85
28 29 5.822519 TGTGTAGATAGGCATGCTTTAAAGG 59.177 40.000 18.92 1.72 0.00 3.11
29 30 5.823045 GTGTAGATAGGCATGCTTTAAAGGT 59.177 40.000 18.92 0.00 0.00 3.50
30 31 6.318900 GTGTAGATAGGCATGCTTTAAAGGTT 59.681 38.462 18.92 0.00 0.00 3.50
31 32 6.889722 TGTAGATAGGCATGCTTTAAAGGTTT 59.110 34.615 18.92 0.00 0.00 3.27
32 33 6.456795 AGATAGGCATGCTTTAAAGGTTTC 57.543 37.500 18.92 4.54 0.00 2.78
33 34 6.190587 AGATAGGCATGCTTTAAAGGTTTCT 58.809 36.000 18.92 3.78 0.00 2.52
34 35 4.525912 AGGCATGCTTTAAAGGTTTCTG 57.474 40.909 18.92 2.67 0.00 3.02
35 36 3.897505 AGGCATGCTTTAAAGGTTTCTGT 59.102 39.130 18.92 0.00 0.00 3.41
36 37 5.076873 AGGCATGCTTTAAAGGTTTCTGTA 58.923 37.500 18.92 0.00 0.00 2.74
37 38 5.716703 AGGCATGCTTTAAAGGTTTCTGTAT 59.283 36.000 18.92 0.00 0.00 2.29
38 39 6.889722 AGGCATGCTTTAAAGGTTTCTGTATA 59.110 34.615 18.92 0.00 0.00 1.47
39 40 7.561356 AGGCATGCTTTAAAGGTTTCTGTATAT 59.439 33.333 18.92 0.00 0.00 0.86
40 41 8.846211 GGCATGCTTTAAAGGTTTCTGTATATA 58.154 33.333 18.92 0.00 0.00 0.86
44 45 9.627123 TGCTTTAAAGGTTTCTGTATATATGCT 57.373 29.630 16.78 0.00 0.00 3.79
49 50 8.807948 AAAGGTTTCTGTATATATGCTTGTGT 57.192 30.769 2.37 0.00 0.00 3.72
50 51 8.807948 AAGGTTTCTGTATATATGCTTGTGTT 57.192 30.769 2.37 0.00 0.00 3.32
51 52 8.438676 AGGTTTCTGTATATATGCTTGTGTTC 57.561 34.615 2.37 0.00 0.00 3.18
52 53 7.224753 AGGTTTCTGTATATATGCTTGTGTTCG 59.775 37.037 2.37 0.00 0.00 3.95
53 54 7.223971 GGTTTCTGTATATATGCTTGTGTTCGA 59.776 37.037 2.37 0.00 0.00 3.71
54 55 8.765219 GTTTCTGTATATATGCTTGTGTTCGAT 58.235 33.333 2.37 0.00 0.00 3.59
55 56 7.873739 TCTGTATATATGCTTGTGTTCGATG 57.126 36.000 2.37 0.00 0.00 3.84
56 57 7.433680 TCTGTATATATGCTTGTGTTCGATGT 58.566 34.615 2.37 0.00 0.00 3.06
57 58 8.573035 TCTGTATATATGCTTGTGTTCGATGTA 58.427 33.333 2.37 0.00 0.00 2.29
58 59 9.191995 CTGTATATATGCTTGTGTTCGATGTAA 57.808 33.333 2.37 0.00 0.00 2.41
59 60 9.705290 TGTATATATGCTTGTGTTCGATGTAAT 57.295 29.630 2.37 0.00 0.00 1.89
61 62 4.882671 ATGCTTGTGTTCGATGTAATCC 57.117 40.909 0.00 0.00 41.39 3.01
62 63 3.006940 TGCTTGTGTTCGATGTAATCCC 58.993 45.455 0.00 0.00 41.39 3.85
63 64 3.270877 GCTTGTGTTCGATGTAATCCCT 58.729 45.455 0.00 0.00 41.39 4.20
64 65 3.063997 GCTTGTGTTCGATGTAATCCCTG 59.936 47.826 0.00 0.00 41.39 4.45
65 66 3.260475 TGTGTTCGATGTAATCCCTGG 57.740 47.619 0.00 0.00 41.39 4.45
66 67 2.835156 TGTGTTCGATGTAATCCCTGGA 59.165 45.455 0.00 0.00 41.39 3.86
67 68 3.454447 TGTGTTCGATGTAATCCCTGGAT 59.546 43.478 0.00 0.00 41.39 3.41
68 69 3.809832 GTGTTCGATGTAATCCCTGGATG 59.190 47.826 0.00 0.00 41.39 3.51
69 70 3.181455 TGTTCGATGTAATCCCTGGATGG 60.181 47.826 0.00 0.00 41.39 3.51
70 71 2.689658 TCGATGTAATCCCTGGATGGT 58.310 47.619 0.00 0.00 41.39 3.55
71 72 3.045634 TCGATGTAATCCCTGGATGGTT 58.954 45.455 0.00 0.00 41.39 3.67
72 73 3.141398 CGATGTAATCCCTGGATGGTTG 58.859 50.000 0.00 0.00 41.39 3.77
73 74 3.181455 CGATGTAATCCCTGGATGGTTGA 60.181 47.826 0.00 0.00 41.39 3.18
74 75 3.644966 TGTAATCCCTGGATGGTTGAC 57.355 47.619 0.00 0.00 34.70 3.18
75 76 3.189606 TGTAATCCCTGGATGGTTGACT 58.810 45.455 0.00 0.00 34.70 3.41
76 77 2.814805 AATCCCTGGATGGTTGACTG 57.185 50.000 0.00 0.00 34.70 3.51
77 78 1.971149 ATCCCTGGATGGTTGACTGA 58.029 50.000 0.00 0.00 32.98 3.41
78 79 1.741028 TCCCTGGATGGTTGACTGAA 58.259 50.000 0.00 0.00 0.00 3.02
79 80 2.061848 TCCCTGGATGGTTGACTGAAA 58.938 47.619 0.00 0.00 0.00 2.69
80 81 2.649312 TCCCTGGATGGTTGACTGAAAT 59.351 45.455 0.00 0.00 0.00 2.17
81 82 3.075882 TCCCTGGATGGTTGACTGAAATT 59.924 43.478 0.00 0.00 0.00 1.82
82 83 4.290985 TCCCTGGATGGTTGACTGAAATTA 59.709 41.667 0.00 0.00 0.00 1.40
83 84 5.044179 TCCCTGGATGGTTGACTGAAATTAT 60.044 40.000 0.00 0.00 0.00 1.28
84 85 6.159575 TCCCTGGATGGTTGACTGAAATTATA 59.840 38.462 0.00 0.00 0.00 0.98
85 86 6.263168 CCCTGGATGGTTGACTGAAATTATAC 59.737 42.308 0.00 0.00 0.00 1.47
86 87 6.828273 CCTGGATGGTTGACTGAAATTATACA 59.172 38.462 0.00 0.00 0.00 2.29
87 88 7.012704 CCTGGATGGTTGACTGAAATTATACAG 59.987 40.741 0.00 0.00 39.65 2.74
118 119 8.925161 AAAAATGCTAGCGCTTAATGAATAAA 57.075 26.923 18.68 0.00 36.97 1.40
119 120 8.566008 AAAATGCTAGCGCTTAATGAATAAAG 57.434 30.769 18.68 3.20 36.97 1.85
120 121 7.496529 AATGCTAGCGCTTAATGAATAAAGA 57.503 32.000 18.68 0.00 36.97 2.52
121 122 6.530913 TGCTAGCGCTTAATGAATAAAGAG 57.469 37.500 18.68 2.33 36.97 2.85
122 123 5.050091 TGCTAGCGCTTAATGAATAAAGAGC 60.050 40.000 18.68 14.40 45.39 4.09
123 124 4.820284 AGCGCTTAATGAATAAAGAGCC 57.180 40.909 2.64 0.00 45.95 4.70
124 125 3.248602 AGCGCTTAATGAATAAAGAGCCG 59.751 43.478 2.64 0.00 45.95 5.52
125 126 3.247648 GCGCTTAATGAATAAAGAGCCGA 59.752 43.478 0.00 0.00 41.07 5.54
126 127 4.260620 GCGCTTAATGAATAAAGAGCCGAA 60.261 41.667 0.00 0.00 41.07 4.30
127 128 5.729454 GCGCTTAATGAATAAAGAGCCGAAA 60.729 40.000 0.00 0.00 41.07 3.46
128 129 5.904080 CGCTTAATGAATAAAGAGCCGAAAG 59.096 40.000 0.00 0.00 0.00 2.62
167 168 5.715434 AAAAAGGGTAAATGTATGCGTGT 57.285 34.783 0.00 0.00 0.00 4.49
168 169 4.695217 AAAGGGTAAATGTATGCGTGTG 57.305 40.909 0.00 0.00 0.00 3.82
169 170 3.343941 AGGGTAAATGTATGCGTGTGT 57.656 42.857 0.00 0.00 0.00 3.72
170 171 4.475051 AGGGTAAATGTATGCGTGTGTA 57.525 40.909 0.00 0.00 0.00 2.90
171 172 5.031066 AGGGTAAATGTATGCGTGTGTAT 57.969 39.130 0.00 0.00 0.00 2.29
172 173 6.164417 AGGGTAAATGTATGCGTGTGTATA 57.836 37.500 0.00 0.00 0.00 1.47
173 174 6.765403 AGGGTAAATGTATGCGTGTGTATAT 58.235 36.000 0.00 0.00 0.00 0.86
174 175 7.898918 AGGGTAAATGTATGCGTGTGTATATA 58.101 34.615 0.00 0.00 0.00 0.86
175 176 8.369424 AGGGTAAATGTATGCGTGTGTATATAA 58.631 33.333 0.00 0.00 0.00 0.98
176 177 8.653338 GGGTAAATGTATGCGTGTGTATATAAG 58.347 37.037 0.00 0.00 0.00 1.73
177 178 9.414295 GGTAAATGTATGCGTGTGTATATAAGA 57.586 33.333 0.00 0.00 0.00 2.10
180 181 9.929180 AAATGTATGCGTGTGTATATAAGATCT 57.071 29.630 0.00 0.00 0.00 2.75
181 182 9.929180 AATGTATGCGTGTGTATATAAGATCTT 57.071 29.630 13.56 13.56 0.00 2.40
182 183 8.742554 TGTATGCGTGTGTATATAAGATCTTG 57.257 34.615 18.47 0.00 0.00 3.02
183 184 8.357402 TGTATGCGTGTGTATATAAGATCTTGT 58.643 33.333 18.47 14.02 0.00 3.16
184 185 7.643528 ATGCGTGTGTATATAAGATCTTGTG 57.356 36.000 18.47 0.00 0.00 3.33
185 186 6.569780 TGCGTGTGTATATAAGATCTTGTGT 58.430 36.000 18.47 12.16 0.00 3.72
186 187 7.708998 TGCGTGTGTATATAAGATCTTGTGTA 58.291 34.615 18.47 11.12 0.00 2.90
187 188 7.860872 TGCGTGTGTATATAAGATCTTGTGTAG 59.139 37.037 18.47 3.54 0.00 2.74
188 189 7.861372 GCGTGTGTATATAAGATCTTGTGTAGT 59.139 37.037 18.47 2.94 0.00 2.73
189 190 9.731819 CGTGTGTATATAAGATCTTGTGTAGTT 57.268 33.333 18.47 0.00 0.00 2.24
264 265 4.973168 ACTAGGAAGATTTGTGTTCAGCA 58.027 39.130 0.00 0.00 0.00 4.41
274 275 2.331451 GTTCAGCACCCGCACAAC 59.669 61.111 0.00 0.00 42.27 3.32
334 335 3.484407 AGATTCTTCAGTGCAGCAACTT 58.516 40.909 0.00 0.00 0.00 2.66
355 356 0.606604 GTTGGACCGAAGACCAGCTA 59.393 55.000 0.00 0.00 35.63 3.32
357 358 1.344065 TGGACCGAAGACCAGCTAAA 58.656 50.000 0.00 0.00 31.44 1.85
358 359 1.275291 TGGACCGAAGACCAGCTAAAG 59.725 52.381 0.00 0.00 31.44 1.85
359 360 1.549170 GGACCGAAGACCAGCTAAAGA 59.451 52.381 0.00 0.00 0.00 2.52
360 361 2.608268 GACCGAAGACCAGCTAAAGAC 58.392 52.381 0.00 0.00 0.00 3.01
361 362 2.231721 GACCGAAGACCAGCTAAAGACT 59.768 50.000 0.00 0.00 0.00 3.24
362 363 3.428532 ACCGAAGACCAGCTAAAGACTA 58.571 45.455 0.00 0.00 0.00 2.59
363 364 4.024670 ACCGAAGACCAGCTAAAGACTAT 58.975 43.478 0.00 0.00 0.00 2.12
364 365 4.466726 ACCGAAGACCAGCTAAAGACTATT 59.533 41.667 0.00 0.00 0.00 1.73
365 366 5.044558 CCGAAGACCAGCTAAAGACTATTC 58.955 45.833 0.00 0.00 0.00 1.75
366 367 5.394224 CCGAAGACCAGCTAAAGACTATTCA 60.394 44.000 0.00 0.00 0.00 2.57
367 368 6.276847 CGAAGACCAGCTAAAGACTATTCAT 58.723 40.000 0.00 0.00 0.00 2.57
368 369 6.199908 CGAAGACCAGCTAAAGACTATTCATG 59.800 42.308 0.00 0.00 0.00 3.07
369 370 6.552445 AGACCAGCTAAAGACTATTCATGT 57.448 37.500 0.00 0.00 0.00 3.21
370 371 6.578023 AGACCAGCTAAAGACTATTCATGTC 58.422 40.000 0.00 0.00 34.88 3.06
371 372 6.382570 AGACCAGCTAAAGACTATTCATGTCT 59.617 38.462 0.00 0.00 45.55 3.41
372 373 6.578023 ACCAGCTAAAGACTATTCATGTCTC 58.422 40.000 0.00 0.00 43.16 3.36
373 374 6.155221 ACCAGCTAAAGACTATTCATGTCTCA 59.845 38.462 0.00 0.00 43.16 3.27
374 375 7.044181 CCAGCTAAAGACTATTCATGTCTCAA 58.956 38.462 0.00 0.00 43.16 3.02
376 377 8.939929 CAGCTAAAGACTATTCATGTCTCAAAA 58.060 33.333 0.00 0.00 43.16 2.44
439 456 1.013596 TAGGACGAAAATGCATGCGG 58.986 50.000 14.09 0.27 0.00 5.69
480 497 3.249189 GCTCCCACCTCCCACACA 61.249 66.667 0.00 0.00 0.00 3.72
551 568 4.189231 AGATGTAGTACGTGCCATTTTCC 58.811 43.478 0.00 0.00 0.00 3.13
592 609 1.339055 GCAGTGCACCAACTCCATCTA 60.339 52.381 14.63 0.00 0.00 1.98
762 980 2.264813 GCATGCACATGTTGGATTGTC 58.735 47.619 14.21 0.00 40.80 3.18
836 1054 0.839946 AGGAAGGAAGCTGTGTGTGT 59.160 50.000 0.00 0.00 0.00 3.72
837 1055 1.202698 AGGAAGGAAGCTGTGTGTGTC 60.203 52.381 0.00 0.00 0.00 3.67
857 1075 6.318648 TGTGTCTGCTATTTCTGTTTTCTTGT 59.681 34.615 0.00 0.00 0.00 3.16
936 1154 7.273320 ACAGTCTAGAGCGCACTATAAATAA 57.727 36.000 15.05 0.00 0.00 1.40
937 1155 7.887381 ACAGTCTAGAGCGCACTATAAATAAT 58.113 34.615 15.05 0.00 0.00 1.28
938 1156 9.011095 ACAGTCTAGAGCGCACTATAAATAATA 57.989 33.333 15.05 0.00 0.00 0.98
991 1209 2.238646 CTGATTTGGCCCACTACCACTA 59.761 50.000 0.00 0.00 36.76 2.74
1050 1268 1.847328 TAGCCACGATTCTCCTGACA 58.153 50.000 0.00 0.00 0.00 3.58
1257 1487 2.646175 CGTCATCGTGTCCACCCCT 61.646 63.158 0.00 0.00 0.00 4.79
1290 1520 0.396435 TGGTGCTCAAGACCAACGAT 59.604 50.000 0.00 0.00 40.65 3.73
1302 1532 1.084370 CCAACGATCTCACCTTCGCC 61.084 60.000 0.00 0.00 38.91 5.54
1446 3497 3.736100 CAAGTGCGGCGCATCCAA 61.736 61.111 38.43 12.06 41.91 3.53
1473 3524 4.957684 CAGGCCGAGATCGCGCAT 62.958 66.667 13.84 4.05 37.31 4.73
1845 3905 0.318762 GAGACAACGAGGACCTGCTT 59.681 55.000 0.00 0.00 0.00 3.91
1861 3921 1.668294 CTTGACGTGCTCCTCAGGT 59.332 57.895 0.00 0.00 45.49 4.00
1899 3959 1.613925 CTCAGTTTCCCTCTCACGTCA 59.386 52.381 0.00 0.00 0.00 4.35
1902 3962 1.614413 AGTTTCCCTCTCACGTCAGAC 59.386 52.381 0.00 0.00 0.00 3.51
1976 4044 5.594725 ACCTTCTCTAGATAGCGTTGATTGA 59.405 40.000 0.00 0.00 0.00 2.57
1977 4045 5.918011 CCTTCTCTAGATAGCGTTGATTGAC 59.082 44.000 0.00 0.00 0.00 3.18
1978 4046 5.096954 TCTCTAGATAGCGTTGATTGACG 57.903 43.478 0.00 0.00 45.40 4.35
2106 4178 1.909781 CAACCCACAGGCAATGGCT 60.910 57.895 2.53 2.53 40.87 4.75
2115 4187 2.189499 GGCAATGGCTAGGGCGAAG 61.189 63.158 0.00 0.00 40.87 3.79
2132 4204 0.241481 AAGCTCGAAGTCCGACAGAC 59.759 55.000 0.40 0.00 46.71 3.51
2168 4243 2.202797 CTCCACCATCACGAGCGG 60.203 66.667 0.00 0.00 0.00 5.52
2493 4574 2.031919 TTCGCGACCACCATGCTT 59.968 55.556 9.15 0.00 0.00 3.91
2714 4802 2.295909 TGTGCTAAAACATCCCACAAGC 59.704 45.455 0.00 0.00 33.90 4.01
2731 4819 3.189287 ACAAGCTTTATCGGTTGAGCAAG 59.811 43.478 0.00 0.96 43.16 4.01
3241 5329 2.227754 CCAAGACGTCTTTTTAGCGC 57.772 50.000 27.79 0.00 33.11 5.92
3242 5330 1.529438 CCAAGACGTCTTTTTAGCGCA 59.471 47.619 27.79 0.00 33.11 6.09
3243 5331 2.411547 CCAAGACGTCTTTTTAGCGCAG 60.412 50.000 27.79 13.02 33.11 5.18
3244 5332 1.429463 AGACGTCTTTTTAGCGCAGG 58.571 50.000 13.58 0.00 0.00 4.85
3245 5333 0.179222 GACGTCTTTTTAGCGCAGGC 60.179 55.000 11.47 0.00 40.37 4.85
3246 5334 1.225745 CGTCTTTTTAGCGCAGGCG 60.226 57.895 11.47 7.34 46.35 5.52
3258 5346 2.793946 CAGGCGCCTGAAAATCGG 59.206 61.111 46.72 21.06 46.30 4.18
3259 5347 3.134127 AGGCGCCTGAAAATCGGC 61.134 61.111 32.33 0.00 46.96 5.54
3260 5348 4.193334 GGCGCCTGAAAATCGGCC 62.193 66.667 22.15 0.00 43.38 6.13
3261 5349 4.193334 GCGCCTGAAAATCGGCCC 62.193 66.667 0.00 0.00 43.38 5.80
3262 5350 2.749839 CGCCTGAAAATCGGCCCA 60.750 61.111 0.00 0.00 43.38 5.36
3263 5351 2.764314 CGCCTGAAAATCGGCCCAG 61.764 63.158 0.00 0.00 43.38 4.45
3264 5352 1.678970 GCCTGAAAATCGGCCCAGT 60.679 57.895 0.00 0.00 40.43 4.00
3265 5353 1.657751 GCCTGAAAATCGGCCCAGTC 61.658 60.000 0.00 0.00 40.43 3.51
3266 5354 1.369091 CCTGAAAATCGGCCCAGTCG 61.369 60.000 0.00 0.00 0.00 4.18
3267 5355 1.982073 CTGAAAATCGGCCCAGTCGC 61.982 60.000 0.00 0.00 0.00 5.19
3268 5356 3.095898 GAAAATCGGCCCAGTCGCG 62.096 63.158 0.00 0.00 0.00 5.87
3278 5366 4.473520 CAGTCGCGCCCCCAAGAT 62.474 66.667 0.00 0.00 0.00 2.40
3279 5367 4.162690 AGTCGCGCCCCCAAGATC 62.163 66.667 0.00 0.00 0.00 2.75
3280 5368 4.162690 GTCGCGCCCCCAAGATCT 62.163 66.667 0.00 0.00 0.00 2.75
3281 5369 3.849951 TCGCGCCCCCAAGATCTC 61.850 66.667 0.00 0.00 0.00 2.75
3282 5370 4.161295 CGCGCCCCCAAGATCTCA 62.161 66.667 0.00 0.00 0.00 3.27
3283 5371 2.512896 GCGCCCCCAAGATCTCAT 59.487 61.111 0.00 0.00 0.00 2.90
3284 5372 1.152881 GCGCCCCCAAGATCTCATT 60.153 57.895 0.00 0.00 0.00 2.57
3285 5373 0.753111 GCGCCCCCAAGATCTCATTT 60.753 55.000 0.00 0.00 0.00 2.32
3286 5374 1.476833 GCGCCCCCAAGATCTCATTTA 60.477 52.381 0.00 0.00 0.00 1.40
3287 5375 2.498167 CGCCCCCAAGATCTCATTTAG 58.502 52.381 0.00 0.00 0.00 1.85
3288 5376 2.234143 GCCCCCAAGATCTCATTTAGC 58.766 52.381 0.00 0.00 0.00 3.09
3289 5377 2.498167 CCCCCAAGATCTCATTTAGCG 58.502 52.381 0.00 0.00 0.00 4.26
3290 5378 1.876156 CCCCAAGATCTCATTTAGCGC 59.124 52.381 0.00 0.00 0.00 5.92
3291 5379 1.876156 CCCAAGATCTCATTTAGCGCC 59.124 52.381 2.29 0.00 0.00 6.53
3292 5380 1.528586 CCAAGATCTCATTTAGCGCCG 59.471 52.381 2.29 0.00 0.00 6.46
3293 5381 1.528586 CAAGATCTCATTTAGCGCCGG 59.471 52.381 2.29 0.00 0.00 6.13
3294 5382 0.753262 AGATCTCATTTAGCGCCGGT 59.247 50.000 2.29 0.00 0.00 5.28
3295 5383 1.139058 AGATCTCATTTAGCGCCGGTT 59.861 47.619 2.29 0.00 0.00 4.44
3296 5384 1.940613 GATCTCATTTAGCGCCGGTTT 59.059 47.619 2.29 0.00 0.00 3.27
3297 5385 1.083489 TCTCATTTAGCGCCGGTTTG 58.917 50.000 2.29 0.00 0.00 2.93
3298 5386 0.098728 CTCATTTAGCGCCGGTTTGG 59.901 55.000 2.29 0.00 42.50 3.28
3299 5387 1.138671 CATTTAGCGCCGGTTTGGG 59.861 57.895 2.29 0.00 38.63 4.12
3311 5399 2.647529 GGTTTGGGCCGAAATAACAG 57.352 50.000 16.49 0.00 0.00 3.16
3312 5400 1.403647 GGTTTGGGCCGAAATAACAGC 60.404 52.381 16.49 2.09 0.00 4.40
3313 5401 1.544246 GTTTGGGCCGAAATAACAGCT 59.456 47.619 16.49 0.00 0.00 4.24
3314 5402 1.173043 TTGGGCCGAAATAACAGCTG 58.827 50.000 13.48 13.48 0.00 4.24
3315 5403 0.679640 TGGGCCGAAATAACAGCTGG 60.680 55.000 19.93 0.00 0.00 4.85
3316 5404 1.433471 GGCCGAAATAACAGCTGGC 59.567 57.895 19.93 8.89 41.72 4.85
3317 5405 1.062525 GCCGAAATAACAGCTGGCG 59.937 57.895 19.93 10.93 32.14 5.69
3318 5406 1.366111 GCCGAAATAACAGCTGGCGA 61.366 55.000 19.93 2.46 32.14 5.54
3319 5407 1.083489 CCGAAATAACAGCTGGCGAA 58.917 50.000 19.93 0.00 0.00 4.70
3320 5408 1.202031 CCGAAATAACAGCTGGCGAAC 60.202 52.381 19.93 3.98 0.00 3.95
3321 5409 1.202031 CGAAATAACAGCTGGCGAACC 60.202 52.381 19.93 2.06 0.00 3.62
3322 5410 1.132453 GAAATAACAGCTGGCGAACCC 59.868 52.381 19.93 0.00 33.59 4.11
3323 5411 0.328258 AATAACAGCTGGCGAACCCT 59.672 50.000 19.93 0.00 33.59 4.34
3324 5412 1.200519 ATAACAGCTGGCGAACCCTA 58.799 50.000 19.93 0.00 33.59 3.53
3325 5413 0.535335 TAACAGCTGGCGAACCCTAG 59.465 55.000 19.93 0.00 33.59 3.02
3326 5414 2.512515 CAGCTGGCGAACCCTAGC 60.513 66.667 5.57 0.00 37.75 3.42
3331 5419 2.510918 GGCGAACCCTAGCCGAAC 60.511 66.667 0.00 0.00 44.22 3.95
3332 5420 2.510918 GCGAACCCTAGCCGAACC 60.511 66.667 0.00 0.00 0.00 3.62
3333 5421 2.186125 CGAACCCTAGCCGAACCC 59.814 66.667 0.00 0.00 0.00 4.11
3334 5422 2.652095 CGAACCCTAGCCGAACCCA 61.652 63.158 0.00 0.00 0.00 4.51
3335 5423 1.681076 GAACCCTAGCCGAACCCAA 59.319 57.895 0.00 0.00 0.00 4.12
3336 5424 0.037160 GAACCCTAGCCGAACCCAAA 59.963 55.000 0.00 0.00 0.00 3.28
3337 5425 0.251033 AACCCTAGCCGAACCCAAAC 60.251 55.000 0.00 0.00 0.00 2.93
3338 5426 1.743995 CCCTAGCCGAACCCAAACG 60.744 63.158 0.00 0.00 0.00 3.60
3339 5427 2.396157 CCTAGCCGAACCCAAACGC 61.396 63.158 0.00 0.00 0.00 4.84
3340 5428 2.358984 TAGCCGAACCCAAACGCC 60.359 61.111 0.00 0.00 0.00 5.68
3341 5429 3.905437 TAGCCGAACCCAAACGCCC 62.905 63.158 0.00 0.00 0.00 6.13
3374 5462 3.353836 GCACCGGCAGAAGCGAAA 61.354 61.111 0.00 0.00 43.41 3.46
3375 5463 2.903547 GCACCGGCAGAAGCGAAAA 61.904 57.895 0.00 0.00 43.41 2.29
3376 5464 1.207593 CACCGGCAGAAGCGAAAAG 59.792 57.895 0.00 0.00 43.41 2.27
3377 5465 1.966451 ACCGGCAGAAGCGAAAAGG 60.966 57.895 0.00 0.00 43.41 3.11
3378 5466 2.690778 CCGGCAGAAGCGAAAAGGG 61.691 63.158 0.00 0.00 43.41 3.95
3379 5467 2.690778 CGGCAGAAGCGAAAAGGGG 61.691 63.158 0.00 0.00 43.41 4.79
3380 5468 1.603739 GGCAGAAGCGAAAAGGGGT 60.604 57.895 0.00 0.00 43.41 4.95
3381 5469 1.581447 GCAGAAGCGAAAAGGGGTG 59.419 57.895 0.00 0.00 0.00 4.61
3382 5470 1.172812 GCAGAAGCGAAAAGGGGTGT 61.173 55.000 0.00 0.00 0.00 4.16
3383 5471 0.593128 CAGAAGCGAAAAGGGGTGTG 59.407 55.000 0.00 0.00 0.00 3.82
3384 5472 0.537371 AGAAGCGAAAAGGGGTGTGG 60.537 55.000 0.00 0.00 0.00 4.17
3385 5473 1.524008 GAAGCGAAAAGGGGTGTGGG 61.524 60.000 0.00 0.00 0.00 4.61
3386 5474 2.989253 GCGAAAAGGGGTGTGGGG 60.989 66.667 0.00 0.00 0.00 4.96
3387 5475 2.989253 CGAAAAGGGGTGTGGGGC 60.989 66.667 0.00 0.00 0.00 5.80
3388 5476 2.603473 GAAAAGGGGTGTGGGGCC 60.603 66.667 0.00 0.00 0.00 5.80
3389 5477 4.614036 AAAAGGGGTGTGGGGCCG 62.614 66.667 0.00 0.00 0.00 6.13
3406 5494 3.134792 GCTCTGTCGGCGAGAGGA 61.135 66.667 30.20 17.38 37.93 3.71
3407 5495 3.106552 CTCTGTCGGCGAGAGGAG 58.893 66.667 30.20 21.80 34.42 3.69
3408 5496 2.438614 TCTGTCGGCGAGAGGAGG 60.439 66.667 30.20 9.32 0.00 4.30
3409 5497 4.200283 CTGTCGGCGAGAGGAGGC 62.200 72.222 24.74 5.31 0.00 4.70
3414 5502 3.403558 GGCGAGAGGAGGCCCTTT 61.404 66.667 0.00 0.00 44.53 3.11
3415 5503 2.671682 GCGAGAGGAGGCCCTTTT 59.328 61.111 0.00 0.00 44.53 2.27
3416 5504 1.450491 GCGAGAGGAGGCCCTTTTC 60.450 63.158 0.00 0.00 44.53 2.29
3417 5505 1.222113 CGAGAGGAGGCCCTTTTCC 59.778 63.158 0.00 0.00 44.53 3.13
3418 5506 1.610327 GAGAGGAGGCCCTTTTCCC 59.390 63.158 0.00 0.00 44.53 3.97
3419 5507 2.258748 GAGAGGAGGCCCTTTTCCCG 62.259 65.000 0.00 0.00 44.53 5.14
3420 5508 3.997400 GAGGAGGCCCTTTTCCCGC 62.997 68.421 0.00 0.00 44.53 6.13
3426 5514 4.442454 CCCTTTTCCCGCCTCCCC 62.442 72.222 0.00 0.00 0.00 4.81
3427 5515 4.442454 CCTTTTCCCGCCTCCCCC 62.442 72.222 0.00 0.00 0.00 5.40
3441 5529 3.820843 CCCCCTTTCCCCCATCGG 61.821 72.222 0.00 0.00 0.00 4.18
3442 5530 4.522975 CCCCTTTCCCCCATCGGC 62.523 72.222 0.00 0.00 0.00 5.54
3443 5531 3.420482 CCCTTTCCCCCATCGGCT 61.420 66.667 0.00 0.00 0.00 5.52
3444 5532 2.683475 CCTTTCCCCCATCGGCTT 59.317 61.111 0.00 0.00 0.00 4.35
3445 5533 1.453928 CCTTTCCCCCATCGGCTTC 60.454 63.158 0.00 0.00 0.00 3.86
3446 5534 1.453928 CTTTCCCCCATCGGCTTCC 60.454 63.158 0.00 0.00 0.00 3.46
3447 5535 2.911221 CTTTCCCCCATCGGCTTCCC 62.911 65.000 0.00 0.00 0.00 3.97
3448 5536 3.962530 TTCCCCCATCGGCTTCCCT 62.963 63.158 0.00 0.00 0.00 4.20
3449 5537 3.878667 CCCCCATCGGCTTCCCTC 61.879 72.222 0.00 0.00 0.00 4.30
3450 5538 3.878667 CCCCATCGGCTTCCCTCC 61.879 72.222 0.00 0.00 0.00 4.30
3451 5539 3.878667 CCCATCGGCTTCCCTCCC 61.879 72.222 0.00 0.00 0.00 4.30
3452 5540 3.089874 CCATCGGCTTCCCTCCCA 61.090 66.667 0.00 0.00 0.00 4.37
3453 5541 2.455565 CCATCGGCTTCCCTCCCAT 61.456 63.158 0.00 0.00 0.00 4.00
3454 5542 1.533711 CATCGGCTTCCCTCCCATT 59.466 57.895 0.00 0.00 0.00 3.16
3455 5543 0.536006 CATCGGCTTCCCTCCCATTC 60.536 60.000 0.00 0.00 0.00 2.67
3456 5544 0.695803 ATCGGCTTCCCTCCCATTCT 60.696 55.000 0.00 0.00 0.00 2.40
3457 5545 0.031515 TCGGCTTCCCTCCCATTCTA 60.032 55.000 0.00 0.00 0.00 2.10
3458 5546 0.106894 CGGCTTCCCTCCCATTCTAC 59.893 60.000 0.00 0.00 0.00 2.59
3459 5547 1.213296 GGCTTCCCTCCCATTCTACA 58.787 55.000 0.00 0.00 0.00 2.74
3460 5548 1.777272 GGCTTCCCTCCCATTCTACAT 59.223 52.381 0.00 0.00 0.00 2.29
3461 5549 2.175715 GGCTTCCCTCCCATTCTACATT 59.824 50.000 0.00 0.00 0.00 2.71
3462 5550 3.481453 GCTTCCCTCCCATTCTACATTC 58.519 50.000 0.00 0.00 0.00 2.67
3463 5551 3.748989 GCTTCCCTCCCATTCTACATTCC 60.749 52.174 0.00 0.00 0.00 3.01
3464 5552 3.438131 TCCCTCCCATTCTACATTCCT 57.562 47.619 0.00 0.00 0.00 3.36
3465 5553 3.318313 TCCCTCCCATTCTACATTCCTC 58.682 50.000 0.00 0.00 0.00 3.71
3466 5554 2.373502 CCCTCCCATTCTACATTCCTCC 59.626 54.545 0.00 0.00 0.00 4.30
3467 5555 2.373502 CCTCCCATTCTACATTCCTCCC 59.626 54.545 0.00 0.00 0.00 4.30
3468 5556 2.037772 CTCCCATTCTACATTCCTCCCG 59.962 54.545 0.00 0.00 0.00 5.14
3469 5557 1.543429 CCCATTCTACATTCCTCCCGC 60.543 57.143 0.00 0.00 0.00 6.13
3470 5558 1.543429 CCATTCTACATTCCTCCCGCC 60.543 57.143 0.00 0.00 0.00 6.13
3471 5559 1.140852 CATTCTACATTCCTCCCGCCA 59.859 52.381 0.00 0.00 0.00 5.69
3472 5560 1.281419 TTCTACATTCCTCCCGCCAA 58.719 50.000 0.00 0.00 0.00 4.52
3473 5561 1.507140 TCTACATTCCTCCCGCCAAT 58.493 50.000 0.00 0.00 0.00 3.16
3474 5562 1.416401 TCTACATTCCTCCCGCCAATC 59.584 52.381 0.00 0.00 0.00 2.67
3475 5563 1.140852 CTACATTCCTCCCGCCAATCA 59.859 52.381 0.00 0.00 0.00 2.57
3476 5564 0.394352 ACATTCCTCCCGCCAATCAC 60.394 55.000 0.00 0.00 0.00 3.06
3477 5565 1.103398 CATTCCTCCCGCCAATCACC 61.103 60.000 0.00 0.00 0.00 4.02
3478 5566 1.281925 ATTCCTCCCGCCAATCACCT 61.282 55.000 0.00 0.00 0.00 4.00
3479 5567 1.910580 TTCCTCCCGCCAATCACCTC 61.911 60.000 0.00 0.00 0.00 3.85
3480 5568 2.190578 CTCCCGCCAATCACCTCC 59.809 66.667 0.00 0.00 0.00 4.30
3481 5569 2.285368 TCCCGCCAATCACCTCCT 60.285 61.111 0.00 0.00 0.00 3.69
3482 5570 2.190578 CCCGCCAATCACCTCCTC 59.809 66.667 0.00 0.00 0.00 3.71
3483 5571 2.190578 CCGCCAATCACCTCCTCC 59.809 66.667 0.00 0.00 0.00 4.30
3484 5572 2.370445 CCGCCAATCACCTCCTCCT 61.370 63.158 0.00 0.00 0.00 3.69
3485 5573 1.144936 CGCCAATCACCTCCTCCTC 59.855 63.158 0.00 0.00 0.00 3.71
3486 5574 1.529309 GCCAATCACCTCCTCCTCC 59.471 63.158 0.00 0.00 0.00 4.30
3487 5575 1.988982 GCCAATCACCTCCTCCTCCC 61.989 65.000 0.00 0.00 0.00 4.30
3488 5576 1.348775 CCAATCACCTCCTCCTCCCC 61.349 65.000 0.00 0.00 0.00 4.81
3489 5577 0.327000 CAATCACCTCCTCCTCCCCT 60.327 60.000 0.00 0.00 0.00 4.79
3490 5578 0.030603 AATCACCTCCTCCTCCCCTC 60.031 60.000 0.00 0.00 0.00 4.30
3491 5579 1.967343 ATCACCTCCTCCTCCCCTCC 61.967 65.000 0.00 0.00 0.00 4.30
3492 5580 3.369388 ACCTCCTCCTCCCCTCCC 61.369 72.222 0.00 0.00 0.00 4.30
3493 5581 3.368501 CCTCCTCCTCCCCTCCCA 61.369 72.222 0.00 0.00 0.00 4.37
3494 5582 2.285180 CTCCTCCTCCCCTCCCAG 59.715 72.222 0.00 0.00 0.00 4.45
3495 5583 4.095400 TCCTCCTCCCCTCCCAGC 62.095 72.222 0.00 0.00 0.00 4.85
3519 5607 4.394712 CCCTGCCGCCGAAGAAGT 62.395 66.667 0.00 0.00 0.00 3.01
3520 5608 2.577059 CCTGCCGCCGAAGAAGTA 59.423 61.111 0.00 0.00 0.00 2.24
3521 5609 1.810030 CCTGCCGCCGAAGAAGTAC 60.810 63.158 0.00 0.00 0.00 2.73
3522 5610 2.126228 TGCCGCCGAAGAAGTACG 60.126 61.111 0.00 0.00 0.00 3.67
3523 5611 2.126189 GCCGCCGAAGAAGTACGT 60.126 61.111 0.00 0.00 0.00 3.57
3524 5612 2.442188 GCCGCCGAAGAAGTACGTG 61.442 63.158 0.00 0.00 0.00 4.49
3525 5613 1.804326 CCGCCGAAGAAGTACGTGG 60.804 63.158 0.00 0.00 0.00 4.94
3526 5614 2.442188 CGCCGAAGAAGTACGTGGC 61.442 63.158 0.00 0.00 39.10 5.01
3527 5615 2.098831 GCCGAAGAAGTACGTGGCC 61.099 63.158 0.00 0.00 36.51 5.36
3528 5616 1.447314 CCGAAGAAGTACGTGGCCC 60.447 63.158 0.00 0.00 0.00 5.80
3529 5617 1.447314 CGAAGAAGTACGTGGCCCC 60.447 63.158 0.00 0.00 0.00 5.80
3530 5618 1.078637 GAAGAAGTACGTGGCCCCC 60.079 63.158 0.00 0.00 0.00 5.40
3574 5662 4.641645 CACCACCCAGCCGAAGCA 62.642 66.667 0.00 0.00 43.56 3.91
3575 5663 4.335647 ACCACCCAGCCGAAGCAG 62.336 66.667 0.00 0.00 43.56 4.24
3576 5664 4.020617 CCACCCAGCCGAAGCAGA 62.021 66.667 0.00 0.00 43.56 4.26
3577 5665 2.435586 CACCCAGCCGAAGCAGAG 60.436 66.667 0.00 0.00 43.56 3.35
3578 5666 3.710722 ACCCAGCCGAAGCAGAGG 61.711 66.667 0.00 0.00 43.56 3.69
3579 5667 3.393970 CCCAGCCGAAGCAGAGGA 61.394 66.667 0.00 0.00 43.56 3.71
3580 5668 2.665000 CCAGCCGAAGCAGAGGAA 59.335 61.111 0.00 0.00 43.56 3.36
3581 5669 1.449246 CCAGCCGAAGCAGAGGAAG 60.449 63.158 0.00 0.00 43.56 3.46
3582 5670 1.294780 CAGCCGAAGCAGAGGAAGT 59.705 57.895 0.00 0.00 43.56 3.01
3583 5671 0.532573 CAGCCGAAGCAGAGGAAGTA 59.467 55.000 0.00 0.00 43.56 2.24
3584 5672 0.820871 AGCCGAAGCAGAGGAAGTAG 59.179 55.000 0.00 0.00 43.56 2.57
3585 5673 0.818296 GCCGAAGCAGAGGAAGTAGA 59.182 55.000 0.00 0.00 39.53 2.59
3586 5674 1.202359 GCCGAAGCAGAGGAAGTAGAG 60.202 57.143 0.00 0.00 39.53 2.43
3587 5675 1.407258 CCGAAGCAGAGGAAGTAGAGG 59.593 57.143 0.00 0.00 0.00 3.69
3588 5676 1.407258 CGAAGCAGAGGAAGTAGAGGG 59.593 57.143 0.00 0.00 0.00 4.30
3589 5677 1.138069 GAAGCAGAGGAAGTAGAGGGC 59.862 57.143 0.00 0.00 0.00 5.19
3590 5678 1.040339 AGCAGAGGAAGTAGAGGGCG 61.040 60.000 0.00 0.00 0.00 6.13
3591 5679 1.439644 CAGAGGAAGTAGAGGGCGC 59.560 63.158 0.00 0.00 0.00 6.53
3592 5680 1.758906 AGAGGAAGTAGAGGGCGCC 60.759 63.158 21.18 21.18 0.00 6.53
3593 5681 3.140225 GAGGAAGTAGAGGGCGCCG 62.140 68.421 22.54 0.00 0.00 6.46
3594 5682 4.893601 GGAAGTAGAGGGCGCCGC 62.894 72.222 22.54 15.51 0.00 6.53
3620 5708 2.192175 CCCCCGGGCATGTCTAAC 59.808 66.667 17.73 0.00 0.00 2.34
3621 5709 2.675242 CCCCCGGGCATGTCTAACA 61.675 63.158 17.73 0.00 0.00 2.41
3622 5710 1.451387 CCCCGGGCATGTCTAACAC 60.451 63.158 17.73 0.00 0.00 3.32
3623 5711 1.451387 CCCGGGCATGTCTAACACC 60.451 63.158 8.08 0.00 0.00 4.16
3624 5712 1.813753 CCGGGCATGTCTAACACCG 60.814 63.158 0.00 0.00 35.73 4.94
3625 5713 1.216977 CGGGCATGTCTAACACCGA 59.783 57.895 0.00 0.00 37.43 4.69
3626 5714 1.082117 CGGGCATGTCTAACACCGAC 61.082 60.000 0.00 0.00 37.43 4.79
3627 5715 0.249398 GGGCATGTCTAACACCGACT 59.751 55.000 0.00 0.00 32.70 4.18
3628 5716 1.359848 GGCATGTCTAACACCGACTG 58.640 55.000 0.00 0.00 32.70 3.51
3629 5717 1.359848 GCATGTCTAACACCGACTGG 58.640 55.000 0.00 0.00 42.84 4.00
3630 5718 1.067142 GCATGTCTAACACCGACTGGA 60.067 52.381 0.00 0.00 39.21 3.86
3631 5719 2.881074 CATGTCTAACACCGACTGGAG 58.119 52.381 0.00 0.00 39.21 3.86
3632 5720 1.254026 TGTCTAACACCGACTGGAGG 58.746 55.000 0.00 0.00 39.21 4.30
3633 5721 0.531200 GTCTAACACCGACTGGAGGG 59.469 60.000 0.00 0.00 39.21 4.30
3634 5722 1.218316 CTAACACCGACTGGAGGGC 59.782 63.158 0.00 0.00 39.21 5.19
3640 5728 3.382832 CGACTGGAGGGCGGAAGT 61.383 66.667 0.00 0.00 43.88 3.01
3641 5729 2.943978 CGACTGGAGGGCGGAAGTT 61.944 63.158 0.00 0.00 43.88 2.66
3642 5730 1.079057 GACTGGAGGGCGGAAGTTC 60.079 63.158 0.00 0.00 0.00 3.01
3643 5731 1.827399 GACTGGAGGGCGGAAGTTCA 61.827 60.000 5.01 0.00 0.00 3.18
3644 5732 1.078848 CTGGAGGGCGGAAGTTCAG 60.079 63.158 5.01 1.36 0.00 3.02
3645 5733 2.436824 GGAGGGCGGAAGTTCAGC 60.437 66.667 18.39 18.39 36.84 4.26
3646 5734 2.815647 GAGGGCGGAAGTTCAGCG 60.816 66.667 19.60 9.20 38.48 5.18
3652 5740 4.388499 GGAAGTTCAGCGCCGGGA 62.388 66.667 2.29 0.00 0.00 5.14
3653 5741 2.815647 GAAGTTCAGCGCCGGGAG 60.816 66.667 2.29 0.00 0.00 4.30
3665 5753 3.775654 CGGGAGGCTGTCACCCTC 61.776 72.222 12.97 5.70 46.54 4.30
3668 5756 2.574399 GAGGCTGTCACCCTCGAC 59.426 66.667 0.00 0.00 39.50 4.20
3669 5757 2.997897 AGGCTGTCACCCTCGACC 60.998 66.667 0.00 0.00 34.88 4.79
3670 5758 4.436998 GGCTGTCACCCTCGACCG 62.437 72.222 0.00 0.00 34.88 4.79
3671 5759 4.436998 GCTGTCACCCTCGACCGG 62.437 72.222 0.00 0.00 34.88 5.28
3672 5760 4.436998 CTGTCACCCTCGACCGGC 62.437 72.222 0.00 0.00 34.88 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.748083 AGCATGCCTATCTACACAATGG 58.252 45.455 15.66 0.00 0.00 3.16
1 2 5.762825 AAAGCATGCCTATCTACACAATG 57.237 39.130 15.66 0.00 0.00 2.82
2 3 7.013655 CCTTTAAAGCATGCCTATCTACACAAT 59.986 37.037 15.66 0.00 0.00 2.71
3 4 6.318648 CCTTTAAAGCATGCCTATCTACACAA 59.681 38.462 15.66 0.00 0.00 3.33
4 5 5.822519 CCTTTAAAGCATGCCTATCTACACA 59.177 40.000 15.66 0.00 0.00 3.72
5 6 5.823045 ACCTTTAAAGCATGCCTATCTACAC 59.177 40.000 15.66 0.00 0.00 2.90
6 7 6.001449 ACCTTTAAAGCATGCCTATCTACA 57.999 37.500 15.66 0.00 0.00 2.74
7 8 6.944234 AACCTTTAAAGCATGCCTATCTAC 57.056 37.500 15.66 0.00 0.00 2.59
8 9 7.283127 CAGAAACCTTTAAAGCATGCCTATCTA 59.717 37.037 15.66 0.00 0.00 1.98
9 10 6.096001 CAGAAACCTTTAAAGCATGCCTATCT 59.904 38.462 15.66 2.47 0.00 1.98
10 11 6.127619 ACAGAAACCTTTAAAGCATGCCTATC 60.128 38.462 15.66 0.14 0.00 2.08
11 12 5.716703 ACAGAAACCTTTAAAGCATGCCTAT 59.283 36.000 15.66 3.14 0.00 2.57
12 13 5.076873 ACAGAAACCTTTAAAGCATGCCTA 58.923 37.500 15.66 3.23 0.00 3.93
13 14 3.897505 ACAGAAACCTTTAAAGCATGCCT 59.102 39.130 15.66 4.37 0.00 4.75
14 15 4.257267 ACAGAAACCTTTAAAGCATGCC 57.743 40.909 15.66 0.00 0.00 4.40
18 19 9.627123 AGCATATATACAGAAACCTTTAAAGCA 57.373 29.630 9.86 0.00 0.00 3.91
23 24 9.899661 ACACAAGCATATATACAGAAACCTTTA 57.100 29.630 0.00 0.00 0.00 1.85
24 25 8.807948 ACACAAGCATATATACAGAAACCTTT 57.192 30.769 0.00 0.00 0.00 3.11
25 26 8.807948 AACACAAGCATATATACAGAAACCTT 57.192 30.769 0.00 0.00 0.00 3.50
26 27 7.224753 CGAACACAAGCATATATACAGAAACCT 59.775 37.037 0.00 0.00 0.00 3.50
27 28 7.223971 TCGAACACAAGCATATATACAGAAACC 59.776 37.037 0.00 0.00 0.00 3.27
28 29 8.126871 TCGAACACAAGCATATATACAGAAAC 57.873 34.615 0.00 0.00 0.00 2.78
29 30 8.764287 CATCGAACACAAGCATATATACAGAAA 58.236 33.333 0.00 0.00 0.00 2.52
30 31 7.926018 ACATCGAACACAAGCATATATACAGAA 59.074 33.333 0.00 0.00 0.00 3.02
31 32 7.433680 ACATCGAACACAAGCATATATACAGA 58.566 34.615 0.00 0.00 0.00 3.41
32 33 7.643528 ACATCGAACACAAGCATATATACAG 57.356 36.000 0.00 0.00 0.00 2.74
33 34 9.705290 ATTACATCGAACACAAGCATATATACA 57.295 29.630 0.00 0.00 0.00 2.29
35 36 9.366216 GGATTACATCGAACACAAGCATATATA 57.634 33.333 0.00 0.00 0.00 0.86
36 37 7.334421 GGGATTACATCGAACACAAGCATATAT 59.666 37.037 0.00 0.00 0.00 0.86
37 38 6.649141 GGGATTACATCGAACACAAGCATATA 59.351 38.462 0.00 0.00 0.00 0.86
38 39 5.470098 GGGATTACATCGAACACAAGCATAT 59.530 40.000 0.00 0.00 0.00 1.78
39 40 4.814234 GGGATTACATCGAACACAAGCATA 59.186 41.667 0.00 0.00 0.00 3.14
40 41 3.627577 GGGATTACATCGAACACAAGCAT 59.372 43.478 0.00 0.00 0.00 3.79
41 42 3.006940 GGGATTACATCGAACACAAGCA 58.993 45.455 0.00 0.00 0.00 3.91
42 43 3.063997 CAGGGATTACATCGAACACAAGC 59.936 47.826 0.00 0.00 0.00 4.01
43 44 3.623060 CCAGGGATTACATCGAACACAAG 59.377 47.826 0.00 0.00 0.00 3.16
44 45 3.262151 TCCAGGGATTACATCGAACACAA 59.738 43.478 0.00 0.00 0.00 3.33
45 46 2.835156 TCCAGGGATTACATCGAACACA 59.165 45.455 0.00 0.00 0.00 3.72
46 47 3.536956 TCCAGGGATTACATCGAACAC 57.463 47.619 0.00 0.00 0.00 3.32
47 48 3.181455 CCATCCAGGGATTACATCGAACA 60.181 47.826 0.00 0.00 31.62 3.18
48 49 3.181454 ACCATCCAGGGATTACATCGAAC 60.181 47.826 0.00 0.00 43.89 3.95
49 50 3.045634 ACCATCCAGGGATTACATCGAA 58.954 45.455 0.00 0.00 43.89 3.71
50 51 2.689658 ACCATCCAGGGATTACATCGA 58.310 47.619 0.00 0.00 43.89 3.59
51 52 3.141398 CAACCATCCAGGGATTACATCG 58.859 50.000 0.00 0.00 43.89 3.84
52 53 4.137543 GTCAACCATCCAGGGATTACATC 58.862 47.826 0.00 0.00 43.89 3.06
53 54 3.788142 AGTCAACCATCCAGGGATTACAT 59.212 43.478 0.00 0.00 43.89 2.29
54 55 3.054434 CAGTCAACCATCCAGGGATTACA 60.054 47.826 0.00 0.00 43.89 2.41
55 56 3.199946 TCAGTCAACCATCCAGGGATTAC 59.800 47.826 0.00 0.00 43.89 1.89
56 57 3.459828 TCAGTCAACCATCCAGGGATTA 58.540 45.455 0.00 0.00 43.89 1.75
57 58 2.278245 TCAGTCAACCATCCAGGGATT 58.722 47.619 0.00 0.00 43.89 3.01
58 59 1.971149 TCAGTCAACCATCCAGGGAT 58.029 50.000 0.00 0.00 43.89 3.85
59 60 1.741028 TTCAGTCAACCATCCAGGGA 58.259 50.000 0.00 0.00 43.89 4.20
60 61 2.584835 TTTCAGTCAACCATCCAGGG 57.415 50.000 0.00 0.00 43.89 4.45
61 62 6.828273 TGTATAATTTCAGTCAACCATCCAGG 59.172 38.462 0.00 0.00 45.67 4.45
62 63 7.554118 ACTGTATAATTTCAGTCAACCATCCAG 59.446 37.037 5.28 0.00 40.28 3.86
63 64 7.402054 ACTGTATAATTTCAGTCAACCATCCA 58.598 34.615 5.28 0.00 40.28 3.41
64 65 7.865706 ACTGTATAATTTCAGTCAACCATCC 57.134 36.000 5.28 0.00 40.28 3.51
99 100 5.378180 GCTCTTTATTCATTAAGCGCTAGC 58.622 41.667 12.05 7.36 45.58 3.42
100 101 5.388890 CGGCTCTTTATTCATTAAGCGCTAG 60.389 44.000 12.05 0.00 33.73 3.42
101 102 4.447724 CGGCTCTTTATTCATTAAGCGCTA 59.552 41.667 12.05 0.00 33.73 4.26
102 103 3.248602 CGGCTCTTTATTCATTAAGCGCT 59.751 43.478 2.64 2.64 33.73 5.92
103 104 3.247648 TCGGCTCTTTATTCATTAAGCGC 59.752 43.478 0.00 0.00 32.75 5.92
104 105 5.403897 TTCGGCTCTTTATTCATTAAGCG 57.596 39.130 0.00 0.00 0.00 4.68
105 106 6.202226 CCTTTCGGCTCTTTATTCATTAAGC 58.798 40.000 0.00 0.00 0.00 3.09
106 107 6.318900 ACCCTTTCGGCTCTTTATTCATTAAG 59.681 38.462 0.00 0.00 33.26 1.85
107 108 6.094881 CACCCTTTCGGCTCTTTATTCATTAA 59.905 38.462 0.00 0.00 33.26 1.40
108 109 5.588648 CACCCTTTCGGCTCTTTATTCATTA 59.411 40.000 0.00 0.00 33.26 1.90
109 110 4.399303 CACCCTTTCGGCTCTTTATTCATT 59.601 41.667 0.00 0.00 33.26 2.57
110 111 3.947834 CACCCTTTCGGCTCTTTATTCAT 59.052 43.478 0.00 0.00 33.26 2.57
111 112 3.244770 ACACCCTTTCGGCTCTTTATTCA 60.245 43.478 0.00 0.00 33.26 2.57
112 113 3.344515 ACACCCTTTCGGCTCTTTATTC 58.655 45.455 0.00 0.00 33.26 1.75
113 114 3.434940 ACACCCTTTCGGCTCTTTATT 57.565 42.857 0.00 0.00 33.26 1.40
114 115 3.434940 AACACCCTTTCGGCTCTTTAT 57.565 42.857 0.00 0.00 33.26 1.40
115 116 2.943036 AACACCCTTTCGGCTCTTTA 57.057 45.000 0.00 0.00 33.26 1.85
116 117 2.067365 AAACACCCTTTCGGCTCTTT 57.933 45.000 0.00 0.00 33.26 2.52
117 118 2.067365 AAAACACCCTTTCGGCTCTT 57.933 45.000 0.00 0.00 33.26 2.85
118 119 2.779506 CTAAAACACCCTTTCGGCTCT 58.220 47.619 0.00 0.00 33.26 4.09
119 120 1.199327 GCTAAAACACCCTTTCGGCTC 59.801 52.381 0.00 0.00 33.26 4.70
120 121 1.202891 AGCTAAAACACCCTTTCGGCT 60.203 47.619 0.00 0.00 33.26 5.52
121 122 1.244816 AGCTAAAACACCCTTTCGGC 58.755 50.000 0.00 0.00 33.26 5.54
122 123 6.746745 TTTATAGCTAAAACACCCTTTCGG 57.253 37.500 0.00 0.00 37.81 4.30
145 146 5.010213 ACACACGCATACATTTACCCTTTTT 59.990 36.000 0.00 0.00 0.00 1.94
146 147 4.521256 ACACACGCATACATTTACCCTTTT 59.479 37.500 0.00 0.00 0.00 2.27
147 148 4.076394 ACACACGCATACATTTACCCTTT 58.924 39.130 0.00 0.00 0.00 3.11
148 149 3.681593 ACACACGCATACATTTACCCTT 58.318 40.909 0.00 0.00 0.00 3.95
149 150 3.343941 ACACACGCATACATTTACCCT 57.656 42.857 0.00 0.00 0.00 4.34
150 151 8.537049 TTATATACACACGCATACATTTACCC 57.463 34.615 0.00 0.00 0.00 3.69
151 152 9.414295 TCTTATATACACACGCATACATTTACC 57.586 33.333 0.00 0.00 0.00 2.85
154 155 9.929180 AGATCTTATATACACACGCATACATTT 57.071 29.630 0.00 0.00 0.00 2.32
155 156 9.929180 AAGATCTTATATACACACGCATACATT 57.071 29.630 6.06 0.00 0.00 2.71
156 157 9.358872 CAAGATCTTATATACACACGCATACAT 57.641 33.333 7.86 0.00 0.00 2.29
157 158 8.357402 ACAAGATCTTATATACACACGCATACA 58.643 33.333 7.86 0.00 0.00 2.29
158 159 8.639428 CACAAGATCTTATATACACACGCATAC 58.361 37.037 7.86 0.00 0.00 2.39
159 160 8.357402 ACACAAGATCTTATATACACACGCATA 58.643 33.333 7.86 0.00 0.00 3.14
160 161 7.210174 ACACAAGATCTTATATACACACGCAT 58.790 34.615 7.86 0.00 0.00 4.73
161 162 6.569780 ACACAAGATCTTATATACACACGCA 58.430 36.000 7.86 0.00 0.00 5.24
162 163 7.861372 ACTACACAAGATCTTATATACACACGC 59.139 37.037 7.86 0.00 0.00 5.34
163 164 9.731819 AACTACACAAGATCTTATATACACACG 57.268 33.333 7.86 0.00 0.00 4.49
197 198 2.708861 TGGTGGTGGTACAGATGTTTCT 59.291 45.455 0.00 0.00 41.80 2.52
207 208 0.398696 TGGATGTGTGGTGGTGGTAC 59.601 55.000 0.00 0.00 0.00 3.34
214 215 1.973281 GTGGGCTGGATGTGTGGTG 60.973 63.158 0.00 0.00 0.00 4.17
264 265 1.408969 AATCCTTTTGTTGTGCGGGT 58.591 45.000 0.00 0.00 0.00 5.28
274 275 5.350633 TGTTGCTGAAGACAAATCCTTTTG 58.649 37.500 0.00 0.00 46.27 2.44
334 335 0.534203 GCTGGTCTTCGGTCCAACAA 60.534 55.000 0.00 0.00 33.14 2.83
378 379 5.350640 CCGTCCGAATAGTCTTTAGCTTTTT 59.649 40.000 0.00 0.00 0.00 1.94
380 381 4.081807 ACCGTCCGAATAGTCTTTAGCTTT 60.082 41.667 0.00 0.00 0.00 3.51
381 382 3.446516 ACCGTCCGAATAGTCTTTAGCTT 59.553 43.478 0.00 0.00 0.00 3.74
382 383 3.022406 ACCGTCCGAATAGTCTTTAGCT 58.978 45.455 0.00 0.00 0.00 3.32
384 385 6.129053 AGTAACCGTCCGAATAGTCTTTAG 57.871 41.667 0.00 0.00 0.00 1.85
439 456 5.893687 TGAATGATCCAACATGTTACATGC 58.106 37.500 23.43 12.87 0.00 4.06
551 568 4.567558 TGCAAACAAGTCATGCAAGAAAAG 59.432 37.500 10.11 0.00 46.23 2.27
592 609 7.398047 TGGTTATGGTGTATAGTGTAGAACTGT 59.602 37.037 0.00 0.00 40.26 3.55
762 980 1.674817 CCACAAACGTACTGGGGCTAG 60.675 57.143 5.95 0.00 28.46 3.42
836 1054 7.174772 TGCATACAAGAAAACAGAAATAGCAGA 59.825 33.333 0.00 0.00 0.00 4.26
837 1055 7.307694 TGCATACAAGAAAACAGAAATAGCAG 58.692 34.615 0.00 0.00 0.00 4.24
872 1090 1.475571 TGCACTGCAGACAAGTCATGT 60.476 47.619 23.35 0.00 38.29 3.21
897 1115 2.168106 AGACTGTAGATGGAGCTGCAAG 59.832 50.000 13.45 7.20 30.12 4.01
898 1116 2.182827 AGACTGTAGATGGAGCTGCAA 58.817 47.619 13.45 0.00 30.12 4.08
899 1117 1.857965 AGACTGTAGATGGAGCTGCA 58.142 50.000 11.44 11.44 0.00 4.41
936 1154 5.810587 CCAACTACGTGCTGAACTGTTATAT 59.189 40.000 0.00 0.00 0.00 0.86
937 1155 5.047872 TCCAACTACGTGCTGAACTGTTATA 60.048 40.000 0.00 0.00 0.00 0.98
938 1156 3.994392 CCAACTACGTGCTGAACTGTTAT 59.006 43.478 0.00 0.00 0.00 1.89
1050 1268 1.845143 AGAGCCTGCCTCAGAATCAAT 59.155 47.619 0.00 0.00 43.31 2.57
1290 1520 3.691342 CGGGTGGCGAAGGTGAGA 61.691 66.667 0.00 0.00 0.00 3.27
1431 3482 3.204827 GATTGGATGCGCCGCACT 61.205 61.111 16.70 3.37 43.04 4.40
1446 3497 1.072678 CTCGGCCTGCATGATGGAT 59.927 57.895 0.00 0.00 0.00 3.41
1473 3524 2.031516 GACGACCGACTCCACGAGA 61.032 63.158 0.00 0.00 33.32 4.04
1845 3905 1.367471 CAACCTGAGGAGCACGTCA 59.633 57.895 4.99 6.38 38.36 4.35
1861 3921 1.152830 GGGTGTCTTCCTTGCCCAA 59.847 57.895 0.00 0.00 39.13 4.12
1899 3959 1.227089 GACGGCGCTGATGATGTCT 60.227 57.895 25.98 0.00 0.00 3.41
1902 3962 0.599466 AGATGACGGCGCTGATGATG 60.599 55.000 25.98 0.00 0.00 3.07
1944 4012 5.176590 CGCTATCTAGAGAAGGTTGCAAATC 59.823 44.000 0.00 0.00 36.95 2.17
1978 4046 5.330295 CAAATTATTCTGTGAGCACTGAGC 58.670 41.667 9.59 0.00 46.19 4.26
1979 4047 5.106436 TGCAAATTATTCTGTGAGCACTGAG 60.106 40.000 9.59 0.00 39.77 3.35
1981 4049 5.050644 TGCAAATTATTCTGTGAGCACTG 57.949 39.130 1.99 1.78 0.00 3.66
2106 4178 1.664321 GGACTTCGAGCTTCGCCCTA 61.664 60.000 0.00 0.00 40.21 3.53
2471 4552 4.980805 TGGTGGTCGCGAACAGGC 62.981 66.667 30.19 17.20 0.00 4.85
2493 4574 1.891919 GTTGGCCAACACGAGCTCA 60.892 57.895 37.95 2.62 40.84 4.26
2623 4711 0.463295 AGATGGCAAGCTGACGATGG 60.463 55.000 0.00 0.00 0.00 3.51
2693 4781 2.295909 GCTTGTGGGATGTTTTAGCACA 59.704 45.455 0.00 0.00 0.00 4.57
2694 4782 2.558359 AGCTTGTGGGATGTTTTAGCAC 59.442 45.455 0.00 0.00 0.00 4.40
2695 4783 2.875296 AGCTTGTGGGATGTTTTAGCA 58.125 42.857 0.00 0.00 0.00 3.49
2696 4784 3.942130 AAGCTTGTGGGATGTTTTAGC 57.058 42.857 0.00 0.00 0.00 3.09
2697 4785 6.258160 CGATAAAGCTTGTGGGATGTTTTAG 58.742 40.000 0.00 0.00 0.00 1.85
2714 4802 3.189287 ACTTGCTTGCTCAACCGATAAAG 59.811 43.478 0.00 0.00 0.00 1.85
3222 5310 1.529438 TGCGCTAAAAAGACGTCTTGG 59.471 47.619 30.33 20.11 36.12 3.61
3223 5311 2.411547 CCTGCGCTAAAAAGACGTCTTG 60.412 50.000 30.33 18.67 36.12 3.02
3224 5312 1.798813 CCTGCGCTAAAAAGACGTCTT 59.201 47.619 24.93 24.93 37.91 3.01
3225 5313 1.429463 CCTGCGCTAAAAAGACGTCT 58.571 50.000 13.58 13.58 0.00 4.18
3226 5314 0.179222 GCCTGCGCTAAAAAGACGTC 60.179 55.000 9.73 7.70 0.00 4.34
3227 5315 1.866925 GCCTGCGCTAAAAAGACGT 59.133 52.632 9.73 0.00 0.00 4.34
3228 5316 1.225745 CGCCTGCGCTAAAAAGACG 60.226 57.895 9.73 0.00 0.00 4.18
3229 5317 4.745549 CGCCTGCGCTAAAAAGAC 57.254 55.556 9.73 0.00 0.00 3.01
3239 5327 2.100991 GATTTTCAGGCGCCTGCG 59.899 61.111 44.77 27.79 43.31 5.18
3240 5328 2.100991 CGATTTTCAGGCGCCTGC 59.899 61.111 44.77 30.92 43.31 4.85
3241 5329 2.793946 CCGATTTTCAGGCGCCTG 59.206 61.111 44.24 44.24 44.86 4.85
3242 5330 3.134127 GCCGATTTTCAGGCGCCT 61.134 61.111 27.08 27.08 44.22 5.52
3247 5335 1.369091 CGACTGGGCCGATTTTCAGG 61.369 60.000 8.96 0.00 0.00 3.86
3248 5336 1.982073 GCGACTGGGCCGATTTTCAG 61.982 60.000 0.00 0.00 0.00 3.02
3249 5337 2.038269 GCGACTGGGCCGATTTTCA 61.038 57.895 0.00 0.00 0.00 2.69
3250 5338 2.791927 GCGACTGGGCCGATTTTC 59.208 61.111 0.00 0.00 0.00 2.29
3251 5339 3.124921 CGCGACTGGGCCGATTTT 61.125 61.111 0.00 0.00 0.00 1.82
3261 5349 4.473520 ATCTTGGGGGCGCGACTG 62.474 66.667 13.91 0.00 0.00 3.51
3262 5350 4.162690 GATCTTGGGGGCGCGACT 62.163 66.667 13.91 0.00 0.00 4.18
3263 5351 4.162690 AGATCTTGGGGGCGCGAC 62.163 66.667 12.10 6.99 0.00 5.19
3264 5352 3.849951 GAGATCTTGGGGGCGCGA 61.850 66.667 12.10 0.00 0.00 5.87
3265 5353 2.947938 AATGAGATCTTGGGGGCGCG 62.948 60.000 0.00 0.00 0.00 6.86
3266 5354 0.753111 AAATGAGATCTTGGGGGCGC 60.753 55.000 0.00 0.00 0.00 6.53
3267 5355 2.498167 CTAAATGAGATCTTGGGGGCG 58.502 52.381 0.00 0.00 0.00 6.13
3268 5356 2.234143 GCTAAATGAGATCTTGGGGGC 58.766 52.381 0.00 0.00 0.00 5.80
3269 5357 2.498167 CGCTAAATGAGATCTTGGGGG 58.502 52.381 0.00 0.00 0.00 5.40
3270 5358 1.876156 GCGCTAAATGAGATCTTGGGG 59.124 52.381 0.00 0.00 0.00 4.96
3271 5359 1.876156 GGCGCTAAATGAGATCTTGGG 59.124 52.381 7.64 0.00 0.00 4.12
3272 5360 1.528586 CGGCGCTAAATGAGATCTTGG 59.471 52.381 7.64 0.00 0.00 3.61
3273 5361 1.528586 CCGGCGCTAAATGAGATCTTG 59.471 52.381 7.64 0.00 0.00 3.02
3274 5362 1.139058 ACCGGCGCTAAATGAGATCTT 59.861 47.619 7.64 0.00 0.00 2.40
3275 5363 0.753262 ACCGGCGCTAAATGAGATCT 59.247 50.000 7.64 0.00 0.00 2.75
3276 5364 1.583054 AACCGGCGCTAAATGAGATC 58.417 50.000 7.64 0.00 0.00 2.75
3277 5365 1.670811 CAAACCGGCGCTAAATGAGAT 59.329 47.619 7.64 0.00 0.00 2.75
3278 5366 1.083489 CAAACCGGCGCTAAATGAGA 58.917 50.000 7.64 0.00 0.00 3.27
3279 5367 0.098728 CCAAACCGGCGCTAAATGAG 59.901 55.000 7.64 0.00 0.00 2.90
3280 5368 1.309499 CCCAAACCGGCGCTAAATGA 61.309 55.000 7.64 0.00 0.00 2.57
3281 5369 1.138671 CCCAAACCGGCGCTAAATG 59.861 57.895 7.64 0.29 0.00 2.32
3282 5370 2.706834 GCCCAAACCGGCGCTAAAT 61.707 57.895 7.64 0.00 39.64 1.40
3283 5371 3.366915 GCCCAAACCGGCGCTAAA 61.367 61.111 7.64 0.00 39.64 1.85
3292 5380 1.403647 GCTGTTATTTCGGCCCAAACC 60.404 52.381 0.00 0.00 34.02 3.27
3293 5381 1.544246 AGCTGTTATTTCGGCCCAAAC 59.456 47.619 0.00 0.00 40.22 2.93
3294 5382 1.543802 CAGCTGTTATTTCGGCCCAAA 59.456 47.619 5.25 0.00 40.22 3.28
3295 5383 1.173043 CAGCTGTTATTTCGGCCCAA 58.827 50.000 5.25 0.00 40.22 4.12
3296 5384 0.679640 CCAGCTGTTATTTCGGCCCA 60.680 55.000 13.81 0.00 40.22 5.36
3297 5385 2.004808 GCCAGCTGTTATTTCGGCCC 62.005 60.000 13.81 0.00 40.22 5.80
3298 5386 1.433471 GCCAGCTGTTATTTCGGCC 59.567 57.895 13.81 0.00 40.22 6.13
3299 5387 1.062525 CGCCAGCTGTTATTTCGGC 59.937 57.895 13.81 5.09 39.72 5.54
3300 5388 1.083489 TTCGCCAGCTGTTATTTCGG 58.917 50.000 13.81 0.00 0.00 4.30
3301 5389 1.202031 GGTTCGCCAGCTGTTATTTCG 60.202 52.381 13.81 6.22 37.19 3.46
3302 5390 1.132453 GGGTTCGCCAGCTGTTATTTC 59.868 52.381 13.81 0.00 39.65 2.17
3303 5391 1.173913 GGGTTCGCCAGCTGTTATTT 58.826 50.000 13.81 0.00 39.65 1.40
3304 5392 0.328258 AGGGTTCGCCAGCTGTTATT 59.672 50.000 13.81 0.00 39.65 1.40
3305 5393 1.139058 CTAGGGTTCGCCAGCTGTTAT 59.861 52.381 13.81 0.00 39.65 1.89
3306 5394 0.535335 CTAGGGTTCGCCAGCTGTTA 59.465 55.000 13.81 0.00 39.65 2.41
3307 5395 1.296715 CTAGGGTTCGCCAGCTGTT 59.703 57.895 13.81 0.00 39.65 3.16
3308 5396 2.982130 CTAGGGTTCGCCAGCTGT 59.018 61.111 13.81 0.00 39.65 4.40
3309 5397 2.512515 GCTAGGGTTCGCCAGCTG 60.513 66.667 6.78 6.78 39.65 4.24
3310 5398 3.787001 GGCTAGGGTTCGCCAGCT 61.787 66.667 7.13 0.00 45.59 4.24
3312 5400 3.014085 TTCGGCTAGGGTTCGCCAG 62.014 63.158 0.00 0.00 46.62 4.85
3313 5401 2.998480 TTCGGCTAGGGTTCGCCA 60.998 61.111 0.00 0.00 46.62 5.69
3314 5402 2.510918 GTTCGGCTAGGGTTCGCC 60.511 66.667 0.00 0.00 42.86 5.54
3315 5403 2.510918 GGTTCGGCTAGGGTTCGC 60.511 66.667 0.00 0.00 0.00 4.70
3316 5404 2.175035 TTGGGTTCGGCTAGGGTTCG 62.175 60.000 0.00 0.00 0.00 3.95
3317 5405 0.037160 TTTGGGTTCGGCTAGGGTTC 59.963 55.000 0.00 0.00 0.00 3.62
3318 5406 0.251033 GTTTGGGTTCGGCTAGGGTT 60.251 55.000 0.00 0.00 0.00 4.11
3319 5407 1.377612 GTTTGGGTTCGGCTAGGGT 59.622 57.895 0.00 0.00 0.00 4.34
3320 5408 1.743995 CGTTTGGGTTCGGCTAGGG 60.744 63.158 0.00 0.00 0.00 3.53
3321 5409 2.396157 GCGTTTGGGTTCGGCTAGG 61.396 63.158 0.00 0.00 0.00 3.02
3322 5410 2.396157 GGCGTTTGGGTTCGGCTAG 61.396 63.158 4.06 0.00 46.29 3.42
3323 5411 2.358984 GGCGTTTGGGTTCGGCTA 60.359 61.111 4.06 0.00 46.29 3.93
3351 5439 4.659172 TTCTGCCGGTGCCCCAAG 62.659 66.667 1.90 0.00 36.33 3.61
3352 5440 4.659172 CTTCTGCCGGTGCCCCAA 62.659 66.667 1.90 0.00 36.33 4.12
3357 5445 2.786564 CTTTTCGCTTCTGCCGGTGC 62.787 60.000 1.90 0.00 35.36 5.01
3358 5446 1.207593 CTTTTCGCTTCTGCCGGTG 59.792 57.895 1.90 0.00 35.36 4.94
3359 5447 1.966451 CCTTTTCGCTTCTGCCGGT 60.966 57.895 1.90 0.00 35.36 5.28
3360 5448 2.690778 CCCTTTTCGCTTCTGCCGG 61.691 63.158 0.00 0.00 35.36 6.13
3361 5449 2.690778 CCCCTTTTCGCTTCTGCCG 61.691 63.158 0.00 0.00 35.36 5.69
3362 5450 1.603739 ACCCCTTTTCGCTTCTGCC 60.604 57.895 0.00 0.00 35.36 4.85
3363 5451 1.172812 ACACCCCTTTTCGCTTCTGC 61.173 55.000 0.00 0.00 0.00 4.26
3364 5452 0.593128 CACACCCCTTTTCGCTTCTG 59.407 55.000 0.00 0.00 0.00 3.02
3365 5453 0.537371 CCACACCCCTTTTCGCTTCT 60.537 55.000 0.00 0.00 0.00 2.85
3366 5454 1.524008 CCCACACCCCTTTTCGCTTC 61.524 60.000 0.00 0.00 0.00 3.86
3367 5455 1.530655 CCCACACCCCTTTTCGCTT 60.531 57.895 0.00 0.00 0.00 4.68
3368 5456 2.115266 CCCACACCCCTTTTCGCT 59.885 61.111 0.00 0.00 0.00 4.93
3369 5457 2.989253 CCCCACACCCCTTTTCGC 60.989 66.667 0.00 0.00 0.00 4.70
3370 5458 2.989253 GCCCCACACCCCTTTTCG 60.989 66.667 0.00 0.00 0.00 3.46
3371 5459 2.603473 GGCCCCACACCCCTTTTC 60.603 66.667 0.00 0.00 0.00 2.29
3372 5460 4.614036 CGGCCCCACACCCCTTTT 62.614 66.667 0.00 0.00 0.00 2.27
3389 5477 3.119709 CTCCTCTCGCCGACAGAGC 62.120 68.421 0.00 0.00 36.77 4.09
3390 5478 2.477176 CCTCCTCTCGCCGACAGAG 61.477 68.421 0.00 0.00 37.70 3.35
3391 5479 2.438614 CCTCCTCTCGCCGACAGA 60.439 66.667 0.00 0.00 0.00 3.41
3392 5480 4.200283 GCCTCCTCTCGCCGACAG 62.200 72.222 0.00 0.00 0.00 3.51
3397 5485 2.878089 GAAAAGGGCCTCCTCTCGCC 62.878 65.000 6.46 0.00 44.07 5.54
3398 5486 1.450491 GAAAAGGGCCTCCTCTCGC 60.450 63.158 6.46 0.00 44.07 5.03
3399 5487 1.222113 GGAAAAGGGCCTCCTCTCG 59.778 63.158 6.46 0.00 44.07 4.04
3400 5488 1.610327 GGGAAAAGGGCCTCCTCTC 59.390 63.158 6.46 2.10 44.07 3.20
3401 5489 2.301738 CGGGAAAAGGGCCTCCTCT 61.302 63.158 6.46 0.00 44.07 3.69
3402 5490 2.272471 CGGGAAAAGGGCCTCCTC 59.728 66.667 6.46 6.38 44.07 3.71
3409 5497 4.442454 GGGGAGGCGGGAAAAGGG 62.442 72.222 0.00 0.00 0.00 3.95
3410 5498 4.442454 GGGGGAGGCGGGAAAAGG 62.442 72.222 0.00 0.00 0.00 3.11
3424 5512 3.820843 CCGATGGGGGAAAGGGGG 61.821 72.222 0.00 0.00 0.00 5.40
3425 5513 4.522975 GCCGATGGGGGAAAGGGG 62.523 72.222 0.00 0.00 35.78 4.79
3426 5514 2.911221 GAAGCCGATGGGGGAAAGGG 62.911 65.000 0.00 0.00 35.78 3.95
3427 5515 1.453928 GAAGCCGATGGGGGAAAGG 60.454 63.158 0.00 0.00 35.78 3.11
3428 5516 1.453928 GGAAGCCGATGGGGGAAAG 60.454 63.158 0.00 0.00 35.78 2.62
3429 5517 2.680965 GGAAGCCGATGGGGGAAA 59.319 61.111 0.00 0.00 35.78 3.13
3430 5518 3.416880 GGGAAGCCGATGGGGGAA 61.417 66.667 0.00 0.00 35.78 3.97
3431 5519 4.431524 AGGGAAGCCGATGGGGGA 62.432 66.667 0.00 0.00 35.78 4.81
3432 5520 3.878667 GAGGGAAGCCGATGGGGG 61.879 72.222 0.00 0.00 35.78 5.40
3433 5521 3.878667 GGAGGGAAGCCGATGGGG 61.879 72.222 0.00 0.00 39.58 4.96
3434 5522 3.878667 GGGAGGGAAGCCGATGGG 61.879 72.222 0.00 0.00 0.00 4.00
3435 5523 1.999634 AATGGGAGGGAAGCCGATGG 62.000 60.000 0.00 0.00 0.00 3.51
3436 5524 0.536006 GAATGGGAGGGAAGCCGATG 60.536 60.000 0.00 0.00 0.00 3.84
3437 5525 0.695803 AGAATGGGAGGGAAGCCGAT 60.696 55.000 0.00 0.00 0.00 4.18
3438 5526 0.031515 TAGAATGGGAGGGAAGCCGA 60.032 55.000 0.00 0.00 0.00 5.54
3439 5527 0.106894 GTAGAATGGGAGGGAAGCCG 59.893 60.000 0.00 0.00 0.00 5.52
3440 5528 1.213296 TGTAGAATGGGAGGGAAGCC 58.787 55.000 0.00 0.00 0.00 4.35
3441 5529 3.481453 GAATGTAGAATGGGAGGGAAGC 58.519 50.000 0.00 0.00 0.00 3.86
3442 5530 3.718956 AGGAATGTAGAATGGGAGGGAAG 59.281 47.826 0.00 0.00 0.00 3.46
3443 5531 3.716872 GAGGAATGTAGAATGGGAGGGAA 59.283 47.826 0.00 0.00 0.00 3.97
3444 5532 3.318313 GAGGAATGTAGAATGGGAGGGA 58.682 50.000 0.00 0.00 0.00 4.20
3445 5533 2.373502 GGAGGAATGTAGAATGGGAGGG 59.626 54.545 0.00 0.00 0.00 4.30
3446 5534 2.373502 GGGAGGAATGTAGAATGGGAGG 59.626 54.545 0.00 0.00 0.00 4.30
3447 5535 2.037772 CGGGAGGAATGTAGAATGGGAG 59.962 54.545 0.00 0.00 0.00 4.30
3448 5536 2.047061 CGGGAGGAATGTAGAATGGGA 58.953 52.381 0.00 0.00 0.00 4.37
3449 5537 1.543429 GCGGGAGGAATGTAGAATGGG 60.543 57.143 0.00 0.00 0.00 4.00
3450 5538 1.543429 GGCGGGAGGAATGTAGAATGG 60.543 57.143 0.00 0.00 0.00 3.16
3451 5539 1.140852 TGGCGGGAGGAATGTAGAATG 59.859 52.381 0.00 0.00 0.00 2.67
3452 5540 1.507140 TGGCGGGAGGAATGTAGAAT 58.493 50.000 0.00 0.00 0.00 2.40
3453 5541 1.281419 TTGGCGGGAGGAATGTAGAA 58.719 50.000 0.00 0.00 0.00 2.10
3454 5542 1.416401 GATTGGCGGGAGGAATGTAGA 59.584 52.381 0.00 0.00 0.00 2.59
3455 5543 1.140852 TGATTGGCGGGAGGAATGTAG 59.859 52.381 0.00 0.00 0.00 2.74
3456 5544 1.134220 GTGATTGGCGGGAGGAATGTA 60.134 52.381 0.00 0.00 0.00 2.29
3457 5545 0.394352 GTGATTGGCGGGAGGAATGT 60.394 55.000 0.00 0.00 0.00 2.71
3458 5546 1.103398 GGTGATTGGCGGGAGGAATG 61.103 60.000 0.00 0.00 0.00 2.67
3459 5547 1.227383 GGTGATTGGCGGGAGGAAT 59.773 57.895 0.00 0.00 0.00 3.01
3460 5548 1.910580 GAGGTGATTGGCGGGAGGAA 61.911 60.000 0.00 0.00 0.00 3.36
3461 5549 2.285368 AGGTGATTGGCGGGAGGA 60.285 61.111 0.00 0.00 0.00 3.71
3462 5550 2.190578 GAGGTGATTGGCGGGAGG 59.809 66.667 0.00 0.00 0.00 4.30
3463 5551 2.190578 GGAGGTGATTGGCGGGAG 59.809 66.667 0.00 0.00 0.00 4.30
3464 5552 2.285368 AGGAGGTGATTGGCGGGA 60.285 61.111 0.00 0.00 0.00 5.14
3465 5553 2.190578 GAGGAGGTGATTGGCGGG 59.809 66.667 0.00 0.00 0.00 6.13
3466 5554 2.190578 GGAGGAGGTGATTGGCGG 59.809 66.667 0.00 0.00 0.00 6.13
3467 5555 1.144936 GAGGAGGAGGTGATTGGCG 59.855 63.158 0.00 0.00 0.00 5.69
3468 5556 1.529309 GGAGGAGGAGGTGATTGGC 59.471 63.158 0.00 0.00 0.00 4.52
3469 5557 1.348775 GGGGAGGAGGAGGTGATTGG 61.349 65.000 0.00 0.00 0.00 3.16
3470 5558 0.327000 AGGGGAGGAGGAGGTGATTG 60.327 60.000 0.00 0.00 0.00 2.67
3471 5559 0.030603 GAGGGGAGGAGGAGGTGATT 60.031 60.000 0.00 0.00 0.00 2.57
3472 5560 1.629297 GAGGGGAGGAGGAGGTGAT 59.371 63.158 0.00 0.00 0.00 3.06
3473 5561 2.637640 GGAGGGGAGGAGGAGGTGA 61.638 68.421 0.00 0.00 0.00 4.02
3474 5562 2.041405 GGAGGGGAGGAGGAGGTG 60.041 72.222 0.00 0.00 0.00 4.00
3475 5563 3.369388 GGGAGGGGAGGAGGAGGT 61.369 72.222 0.00 0.00 0.00 3.85
3476 5564 3.368501 TGGGAGGGGAGGAGGAGG 61.369 72.222 0.00 0.00 0.00 4.30
3477 5565 2.285180 CTGGGAGGGGAGGAGGAG 59.715 72.222 0.00 0.00 0.00 3.69
3478 5566 4.095400 GCTGGGAGGGGAGGAGGA 62.095 72.222 0.00 0.00 0.00 3.71
3502 5590 3.014085 TACTTCTTCGGCGGCAGGG 62.014 63.158 10.53 3.59 0.00 4.45
3503 5591 1.810030 GTACTTCTTCGGCGGCAGG 60.810 63.158 10.53 0.00 0.00 4.85
3504 5592 2.158959 CGTACTTCTTCGGCGGCAG 61.159 63.158 10.53 3.58 0.00 4.85
3505 5593 2.126228 CGTACTTCTTCGGCGGCA 60.126 61.111 10.53 0.00 0.00 5.69
3506 5594 2.126189 ACGTACTTCTTCGGCGGC 60.126 61.111 7.21 0.00 0.00 6.53
3507 5595 1.804326 CCACGTACTTCTTCGGCGG 60.804 63.158 7.21 0.00 0.00 6.13
3508 5596 2.442188 GCCACGTACTTCTTCGGCG 61.442 63.158 0.00 0.00 0.00 6.46
3509 5597 2.098831 GGCCACGTACTTCTTCGGC 61.099 63.158 0.00 0.86 38.85 5.54
3510 5598 1.447314 GGGCCACGTACTTCTTCGG 60.447 63.158 4.39 0.00 0.00 4.30
3511 5599 1.447314 GGGGCCACGTACTTCTTCG 60.447 63.158 4.39 0.00 0.00 3.79
3512 5600 1.078637 GGGGGCCACGTACTTCTTC 60.079 63.158 4.39 0.00 0.00 2.87
3513 5601 3.075186 GGGGGCCACGTACTTCTT 58.925 61.111 4.39 0.00 0.00 2.52
3557 5645 4.641645 TGCTTCGGCTGGGTGGTG 62.642 66.667 0.00 0.00 42.37 4.17
3558 5646 4.335647 CTGCTTCGGCTGGGTGGT 62.336 66.667 0.00 0.00 42.37 4.16
3559 5647 3.965539 CTCTGCTTCGGCTGGGTGG 62.966 68.421 0.00 0.00 42.37 4.61
3560 5648 2.435586 CTCTGCTTCGGCTGGGTG 60.436 66.667 0.00 0.00 42.37 4.61
3561 5649 3.710722 CCTCTGCTTCGGCTGGGT 61.711 66.667 0.00 0.00 42.37 4.51
3562 5650 2.866085 CTTCCTCTGCTTCGGCTGGG 62.866 65.000 0.00 0.00 42.37 4.45
3563 5651 1.449246 CTTCCTCTGCTTCGGCTGG 60.449 63.158 0.00 0.00 42.37 4.85
3564 5652 0.532573 TACTTCCTCTGCTTCGGCTG 59.467 55.000 0.00 0.00 42.37 4.85
3565 5653 0.820871 CTACTTCCTCTGCTTCGGCT 59.179 55.000 0.00 0.00 42.37 5.52
3566 5654 0.818296 TCTACTTCCTCTGCTTCGGC 59.182 55.000 0.00 0.00 42.19 5.54
3567 5655 1.407258 CCTCTACTTCCTCTGCTTCGG 59.593 57.143 0.00 0.00 0.00 4.30
3568 5656 1.407258 CCCTCTACTTCCTCTGCTTCG 59.593 57.143 0.00 0.00 0.00 3.79
3569 5657 1.138069 GCCCTCTACTTCCTCTGCTTC 59.862 57.143 0.00 0.00 0.00 3.86
3570 5658 1.199615 GCCCTCTACTTCCTCTGCTT 58.800 55.000 0.00 0.00 0.00 3.91
3571 5659 1.040339 CGCCCTCTACTTCCTCTGCT 61.040 60.000 0.00 0.00 0.00 4.24
3572 5660 1.439644 CGCCCTCTACTTCCTCTGC 59.560 63.158 0.00 0.00 0.00 4.26
3573 5661 1.439644 GCGCCCTCTACTTCCTCTG 59.560 63.158 0.00 0.00 0.00 3.35
3574 5662 1.758906 GGCGCCCTCTACTTCCTCT 60.759 63.158 18.11 0.00 0.00 3.69
3575 5663 2.816012 GGCGCCCTCTACTTCCTC 59.184 66.667 18.11 0.00 0.00 3.71
3576 5664 3.148279 CGGCGCCCTCTACTTCCT 61.148 66.667 23.46 0.00 0.00 3.36
3577 5665 4.893601 GCGGCGCCCTCTACTTCC 62.894 72.222 23.58 0.00 0.00 3.46
3578 5666 4.893601 GGCGGCGCCCTCTACTTC 62.894 72.222 39.67 11.75 44.06 3.01
3603 5691 2.192175 GTTAGACATGCCCGGGGG 59.808 66.667 25.28 2.24 38.57 5.40
3604 5692 1.451387 GTGTTAGACATGCCCGGGG 60.451 63.158 25.28 9.31 0.00 5.73
3605 5693 1.451387 GGTGTTAGACATGCCCGGG 60.451 63.158 19.09 19.09 0.00 5.73
3606 5694 1.813753 CGGTGTTAGACATGCCCGG 60.814 63.158 0.00 0.00 33.33 5.73
3607 5695 1.082117 GTCGGTGTTAGACATGCCCG 61.082 60.000 0.00 3.14 36.83 6.13
3608 5696 0.249398 AGTCGGTGTTAGACATGCCC 59.751 55.000 0.00 0.00 40.84 5.36
3609 5697 1.359848 CAGTCGGTGTTAGACATGCC 58.640 55.000 0.00 0.00 40.84 4.40
3610 5698 1.067142 TCCAGTCGGTGTTAGACATGC 60.067 52.381 0.00 0.00 40.84 4.06
3611 5699 2.417379 CCTCCAGTCGGTGTTAGACATG 60.417 54.545 0.00 0.00 40.84 3.21
3612 5700 1.825474 CCTCCAGTCGGTGTTAGACAT 59.175 52.381 0.00 0.00 40.84 3.06
3613 5701 1.254026 CCTCCAGTCGGTGTTAGACA 58.746 55.000 0.00 0.00 40.84 3.41
3614 5702 0.531200 CCCTCCAGTCGGTGTTAGAC 59.469 60.000 0.00 0.00 38.81 2.59
3615 5703 1.255667 GCCCTCCAGTCGGTGTTAGA 61.256 60.000 0.00 0.00 0.00 2.10
3616 5704 1.218316 GCCCTCCAGTCGGTGTTAG 59.782 63.158 0.00 0.00 0.00 2.34
3617 5705 2.642254 CGCCCTCCAGTCGGTGTTA 61.642 63.158 0.00 0.00 0.00 2.41
3618 5706 4.003788 CGCCCTCCAGTCGGTGTT 62.004 66.667 0.00 0.00 0.00 3.32
3622 5710 4.148825 CTTCCGCCCTCCAGTCGG 62.149 72.222 0.00 0.00 44.16 4.79
3623 5711 2.837371 GAACTTCCGCCCTCCAGTCG 62.837 65.000 0.00 0.00 0.00 4.18
3624 5712 1.079057 GAACTTCCGCCCTCCAGTC 60.079 63.158 0.00 0.00 0.00 3.51
3625 5713 1.831652 CTGAACTTCCGCCCTCCAGT 61.832 60.000 0.00 0.00 0.00 4.00
3626 5714 1.078848 CTGAACTTCCGCCCTCCAG 60.079 63.158 0.00 0.00 0.00 3.86
3627 5715 3.068881 CTGAACTTCCGCCCTCCA 58.931 61.111 0.00 0.00 0.00 3.86
3628 5716 2.436824 GCTGAACTTCCGCCCTCC 60.437 66.667 0.00 0.00 0.00 4.30
3629 5717 2.815647 CGCTGAACTTCCGCCCTC 60.816 66.667 0.10 0.00 0.00 4.30
3635 5723 4.388499 TCCCGGCGCTGAACTTCC 62.388 66.667 20.25 0.00 0.00 3.46
3636 5724 2.815647 CTCCCGGCGCTGAACTTC 60.816 66.667 20.25 0.00 0.00 3.01
3637 5725 4.394712 CCTCCCGGCGCTGAACTT 62.395 66.667 20.25 0.00 0.00 2.66
3653 5741 4.436998 CGGTCGAGGGTGACAGCC 62.437 72.222 16.14 16.14 40.72 4.85
3654 5742 4.436998 CCGGTCGAGGGTGACAGC 62.437 72.222 0.00 0.00 40.72 4.40
3655 5743 4.436998 GCCGGTCGAGGGTGACAG 62.437 72.222 1.90 0.00 40.72 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.