Multiple sequence alignment - TraesCS7A01G214400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G214400 chr7A 100.000 4456 0 0 1 4456 178619046 178614591 0.000000e+00 8229.0
1 TraesCS7A01G214400 chr7A 87.102 628 74 7 27 649 203120952 203120327 0.000000e+00 704.0
2 TraesCS7A01G214400 chr7A 94.909 275 13 1 4182 4456 178299934 178300207 3.180000e-116 429.0
3 TraesCS7A01G214400 chr7A 94.853 272 14 0 4185 4456 618661653 618661382 4.120000e-115 425.0
4 TraesCS7A01G214400 chr7D 95.017 2609 114 10 928 3526 176158800 176161402 0.000000e+00 4084.0
5 TraesCS7A01G214400 chr7D 94.231 52 3 0 855 906 176158677 176158728 3.690000e-11 80.5
6 TraesCS7A01G214400 chr7D 94.737 38 1 1 906 943 176158747 176158783 1.730000e-04 58.4
7 TraesCS7A01G214400 chr7B 93.485 2763 128 35 903 3637 141958889 141956151 0.000000e+00 4058.0
8 TraesCS7A01G214400 chr7B 89.054 539 45 5 3651 4184 141955784 141955255 0.000000e+00 656.0
9 TraesCS7A01G214400 chr7B 86.567 67 7 2 2495 2560 180041032 180040967 6.180000e-09 73.1
10 TraesCS7A01G214400 chr4A 87.363 641 73 8 14 649 134476708 134476071 0.000000e+00 728.0
11 TraesCS7A01G214400 chr4A 85.692 643 84 8 10 647 257771354 257771993 0.000000e+00 671.0
12 TraesCS7A01G214400 chr1D 87.122 629 73 7 20 643 89608203 89607578 0.000000e+00 706.0
13 TraesCS7A01G214400 chr1D 94.853 272 14 0 4185 4456 254666308 254666037 4.120000e-115 425.0
14 TraesCS7A01G214400 chr3A 86.329 651 84 5 1 647 351878205 351877556 0.000000e+00 704.0
15 TraesCS7A01G214400 chr5B 86.314 643 83 5 14 652 277951120 277951761 0.000000e+00 695.0
16 TraesCS7A01G214400 chr5A 86.935 620 72 9 14 627 346353135 346352519 0.000000e+00 688.0
17 TraesCS7A01G214400 chr5A 95.273 275 12 1 4182 4456 172257990 172258263 6.850000e-118 435.0
18 TraesCS7A01G214400 chr2A 86.159 643 81 8 10 647 173001069 173001708 0.000000e+00 688.0
19 TraesCS7A01G214400 chr2A 85.559 644 84 9 5 642 499174839 499175479 0.000000e+00 665.0
20 TraesCS7A01G214400 chr2A 90.244 41 4 0 2518 2558 202890346 202890386 2.000000e-03 54.7
21 TraesCS7A01G214400 chr5D 95.221 272 13 0 4185 4456 297401605 297401334 8.850000e-117 431.0
22 TraesCS7A01G214400 chr4D 94.928 276 13 1 4182 4456 82538685 82538960 8.850000e-117 431.0
23 TraesCS7A01G214400 chr1A 95.221 272 12 1 4185 4456 180419135 180418865 3.180000e-116 429.0
24 TraesCS7A01G214400 chr3D 95.203 271 12 1 4186 4456 465428433 465428702 1.150000e-115 427.0
25 TraesCS7A01G214400 chr3D 94.265 279 13 3 4181 4456 456871826 456871548 1.480000e-114 424.0
26 TraesCS7A01G214400 chr6D 94.595 37 2 0 2512 2548 122519321 122519357 1.730000e-04 58.4
27 TraesCS7A01G214400 chr6B 94.444 36 1 1 3981 4016 9091873 9091839 2.000000e-03 54.7
28 TraesCS7A01G214400 chr4B 100.000 29 0 0 3988 4016 17032574 17032602 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G214400 chr7A 178614591 178619046 4455 True 8229.000000 8229 100.000000 1 4456 1 chr7A.!!$R1 4455
1 TraesCS7A01G214400 chr7A 203120327 203120952 625 True 704.000000 704 87.102000 27 649 1 chr7A.!!$R2 622
2 TraesCS7A01G214400 chr7D 176158677 176161402 2725 False 1407.633333 4084 94.661667 855 3526 3 chr7D.!!$F1 2671
3 TraesCS7A01G214400 chr7B 141955255 141958889 3634 True 2357.000000 4058 91.269500 903 4184 2 chr7B.!!$R2 3281
4 TraesCS7A01G214400 chr4A 134476071 134476708 637 True 728.000000 728 87.363000 14 649 1 chr4A.!!$R1 635
5 TraesCS7A01G214400 chr4A 257771354 257771993 639 False 671.000000 671 85.692000 10 647 1 chr4A.!!$F1 637
6 TraesCS7A01G214400 chr1D 89607578 89608203 625 True 706.000000 706 87.122000 20 643 1 chr1D.!!$R1 623
7 TraesCS7A01G214400 chr3A 351877556 351878205 649 True 704.000000 704 86.329000 1 647 1 chr3A.!!$R1 646
8 TraesCS7A01G214400 chr5B 277951120 277951761 641 False 695.000000 695 86.314000 14 652 1 chr5B.!!$F1 638
9 TraesCS7A01G214400 chr5A 346352519 346353135 616 True 688.000000 688 86.935000 14 627 1 chr5A.!!$R1 613
10 TraesCS7A01G214400 chr2A 173001069 173001708 639 False 688.000000 688 86.159000 10 647 1 chr2A.!!$F1 637
11 TraesCS7A01G214400 chr2A 499174839 499175479 640 False 665.000000 665 85.559000 5 642 1 chr2A.!!$F3 637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
696 705 0.031917 TTACTCCCTACCGCCATGGA 60.032 55.0 18.40 0.0 42.00 3.41 F
1694 1763 0.105224 TTCGACACCATGGTCAACGT 59.895 50.0 16.53 10.2 37.66 3.99 F
2055 2124 0.323629 CCTCCTCCTTTACCAACGCA 59.676 55.0 0.00 0.0 0.00 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2166 2235 0.781787 CGAAGAACATGAACGCGACA 59.218 50.0 15.93 13.5 0.0 4.35 R
2904 2973 0.176680 CGGTCTCCTCCCTGTCAATG 59.823 60.0 0.00 0.0 0.0 2.82 R
3867 4345 0.251297 TGGCAGCAACACTAAGGCAT 60.251 50.0 0.00 0.0 0.0 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 119 4.844655 AGTATAATGGAGAACCCGCCTTAT 59.155 41.667 0.00 0.00 37.93 1.73
171 173 1.880027 GTCATTGAAGGCAAGTTCGGT 59.120 47.619 0.00 0.00 37.45 4.69
191 193 0.033011 GGCTACTGAGGGAGTCCTGA 60.033 60.000 9.58 0.00 45.05 3.86
196 198 4.038642 GCTACTGAGGGAGTCCTGAATTAG 59.961 50.000 9.58 6.26 45.05 1.73
250 252 1.524002 CAGACTGATGGGCCGTGAT 59.476 57.895 1.02 0.00 0.00 3.06
316 319 0.179084 TGCGTGGATAGTAGGCTTGC 60.179 55.000 0.00 0.00 0.00 4.01
321 325 1.557832 TGGATAGTAGGCTTGCCGTTT 59.442 47.619 5.95 0.00 0.00 3.60
363 367 5.300034 TCTCTGTAAACCGACTCTGTACAAA 59.700 40.000 0.00 0.00 0.00 2.83
364 368 6.015688 TCTCTGTAAACCGACTCTGTACAAAT 60.016 38.462 0.00 0.00 0.00 2.32
371 375 3.130516 CCGACTCTGTACAAATCTAGGCA 59.869 47.826 0.00 0.00 0.00 4.75
377 381 4.777896 TCTGTACAAATCTAGGCACCTCTT 59.222 41.667 0.00 0.00 0.00 2.85
447 452 7.766736 TCATATAGGCTAGACATCTAGGGTA 57.233 40.000 15.98 0.00 44.63 3.69
464 469 4.673968 AGGGTATAGCCATTACGATCTCA 58.326 43.478 22.59 0.00 39.65 3.27
499 505 8.424918 CAACTCTTGTAACCCTATACTCATCAT 58.575 37.037 0.00 0.00 0.00 2.45
501 507 9.656323 ACTCTTGTAACCCTATACTCATCATAA 57.344 33.333 0.00 0.00 0.00 1.90
517 523 7.558807 ACTCATCATAATCAATCAAGCAGGAAA 59.441 33.333 0.00 0.00 0.00 3.13
522 528 5.526506 AATCAATCAAGCAGGAAATAGGC 57.473 39.130 0.00 0.00 0.00 3.93
550 556 1.913419 TCCATTAAGAAGGCCCGAACT 59.087 47.619 0.00 0.00 0.00 3.01
590 598 1.906574 TGCCTCCTGTTACCTTCGATT 59.093 47.619 0.00 0.00 0.00 3.34
593 601 3.786635 CCTCCTGTTACCTTCGATTCTG 58.213 50.000 0.00 0.00 0.00 3.02
607 615 2.677199 GATTCTGAGACGCACAGTTCA 58.323 47.619 0.00 0.00 36.81 3.18
609 617 1.318576 TCTGAGACGCACAGTTCAGA 58.681 50.000 0.00 0.00 40.84 3.27
613 621 0.753262 AGACGCACAGTTCAGAACCT 59.247 50.000 9.85 0.00 0.00 3.50
627 636 3.138468 TCAGAACCTCCTATCCGAGATCA 59.862 47.826 0.00 0.00 30.97 2.92
629 638 4.526262 CAGAACCTCCTATCCGAGATCAAT 59.474 45.833 0.00 0.00 30.97 2.57
652 661 2.612604 GTTTTGACACCAACACCAACC 58.387 47.619 0.00 0.00 29.19 3.77
653 662 0.811915 TTTGACACCAACACCAACCG 59.188 50.000 0.00 0.00 30.88 4.44
654 663 1.658686 TTGACACCAACACCAACCGC 61.659 55.000 0.00 0.00 0.00 5.68
655 664 2.831284 ACACCAACACCAACCGCC 60.831 61.111 0.00 0.00 0.00 6.13
656 665 2.830827 CACCAACACCAACCGCCA 60.831 61.111 0.00 0.00 0.00 5.69
657 666 2.043852 ACCAACACCAACCGCCAA 60.044 55.556 0.00 0.00 0.00 4.52
658 667 2.124693 ACCAACACCAACCGCCAAG 61.125 57.895 0.00 0.00 0.00 3.61
660 669 3.223589 AACACCAACCGCCAAGGC 61.224 61.111 0.00 0.00 46.52 4.35
671 680 3.006728 CCAAGGCCCCTGACGGTA 61.007 66.667 0.00 0.00 0.00 4.02
672 681 2.584608 CAAGGCCCCTGACGGTAG 59.415 66.667 0.00 0.00 0.00 3.18
673 682 2.687566 AAGGCCCCTGACGGTAGG 60.688 66.667 0.00 0.54 37.59 3.18
676 685 2.443390 GCCCCTGACGGTAGGCTA 60.443 66.667 5.51 0.00 42.34 3.93
677 686 1.837499 GCCCCTGACGGTAGGCTAT 60.837 63.158 0.00 0.00 42.34 2.97
678 687 1.408453 GCCCCTGACGGTAGGCTATT 61.408 60.000 0.00 0.00 42.34 1.73
679 688 2.005370 CCCCTGACGGTAGGCTATTA 57.995 55.000 0.00 0.00 36.47 0.98
680 689 1.617357 CCCCTGACGGTAGGCTATTAC 59.383 57.143 0.00 0.00 36.47 1.89
681 690 2.595238 CCCTGACGGTAGGCTATTACT 58.405 52.381 0.00 0.00 36.47 2.24
682 691 2.557490 CCCTGACGGTAGGCTATTACTC 59.443 54.545 0.00 0.00 36.47 2.59
683 692 2.557490 CCTGACGGTAGGCTATTACTCC 59.443 54.545 0.00 0.00 0.00 3.85
684 693 2.557490 CTGACGGTAGGCTATTACTCCC 59.443 54.545 0.00 0.00 0.00 4.30
685 694 2.176364 TGACGGTAGGCTATTACTCCCT 59.824 50.000 0.00 0.00 0.00 4.20
686 695 3.395607 TGACGGTAGGCTATTACTCCCTA 59.604 47.826 0.00 0.00 0.00 3.53
687 696 3.755905 GACGGTAGGCTATTACTCCCTAC 59.244 52.174 0.00 7.39 46.60 3.18
690 699 1.630223 AGGCTATTACTCCCTACCGC 58.370 55.000 0.00 0.00 0.00 5.68
691 700 0.607112 GGCTATTACTCCCTACCGCC 59.393 60.000 0.00 0.00 0.00 6.13
692 701 1.335145 GCTATTACTCCCTACCGCCA 58.665 55.000 0.00 0.00 0.00 5.69
693 702 1.900486 GCTATTACTCCCTACCGCCAT 59.100 52.381 0.00 0.00 0.00 4.40
694 703 2.353803 GCTATTACTCCCTACCGCCATG 60.354 54.545 0.00 0.00 0.00 3.66
695 704 1.056660 ATTACTCCCTACCGCCATGG 58.943 55.000 7.63 7.63 46.41 3.66
696 705 0.031917 TTACTCCCTACCGCCATGGA 60.032 55.000 18.40 0.00 42.00 3.41
697 706 0.757935 TACTCCCTACCGCCATGGAC 60.758 60.000 18.40 5.97 42.00 4.02
698 707 2.766651 TCCCTACCGCCATGGACC 60.767 66.667 18.40 0.00 42.00 4.46
699 708 2.768344 CCCTACCGCCATGGACCT 60.768 66.667 18.40 0.00 42.00 3.85
700 709 2.505982 CCTACCGCCATGGACCTG 59.494 66.667 18.40 2.03 42.00 4.00
701 710 2.505982 CTACCGCCATGGACCTGG 59.494 66.667 18.40 13.37 42.00 4.45
708 717 3.175133 CCATGGACCTGGCTGTAAC 57.825 57.895 5.56 0.00 0.00 2.50
709 718 0.327924 CCATGGACCTGGCTGTAACA 59.672 55.000 5.56 0.00 0.00 2.41
710 719 1.271871 CCATGGACCTGGCTGTAACAA 60.272 52.381 5.56 0.00 0.00 2.83
711 720 2.513753 CATGGACCTGGCTGTAACAAA 58.486 47.619 0.00 0.00 0.00 2.83
712 721 2.738587 TGGACCTGGCTGTAACAAAA 57.261 45.000 0.00 0.00 0.00 2.44
713 722 2.582052 TGGACCTGGCTGTAACAAAAG 58.418 47.619 0.00 0.00 0.00 2.27
714 723 1.886542 GGACCTGGCTGTAACAAAAGG 59.113 52.381 0.00 0.00 0.00 3.11
715 724 2.488347 GGACCTGGCTGTAACAAAAGGA 60.488 50.000 0.00 0.00 0.00 3.36
716 725 3.421844 GACCTGGCTGTAACAAAAGGAT 58.578 45.455 0.00 0.00 0.00 3.24
717 726 3.421844 ACCTGGCTGTAACAAAAGGATC 58.578 45.455 0.00 0.00 0.00 3.36
718 727 3.181434 ACCTGGCTGTAACAAAAGGATCA 60.181 43.478 0.00 0.00 0.00 2.92
719 728 3.441572 CCTGGCTGTAACAAAAGGATCAG 59.558 47.826 0.00 0.00 0.00 2.90
720 729 3.420893 TGGCTGTAACAAAAGGATCAGG 58.579 45.455 0.00 0.00 0.00 3.86
721 730 3.181434 TGGCTGTAACAAAAGGATCAGGT 60.181 43.478 0.00 0.00 0.00 4.00
722 731 3.440522 GGCTGTAACAAAAGGATCAGGTC 59.559 47.826 0.00 0.00 0.00 3.85
723 732 4.327680 GCTGTAACAAAAGGATCAGGTCT 58.672 43.478 0.00 0.00 0.00 3.85
724 733 4.393371 GCTGTAACAAAAGGATCAGGTCTC 59.607 45.833 0.00 0.00 0.00 3.36
725 734 4.566004 TGTAACAAAAGGATCAGGTCTCG 58.434 43.478 0.00 0.00 0.00 4.04
726 735 4.282449 TGTAACAAAAGGATCAGGTCTCGA 59.718 41.667 0.00 0.00 0.00 4.04
727 736 4.351874 AACAAAAGGATCAGGTCTCGAA 57.648 40.909 0.00 0.00 0.00 3.71
728 737 4.351874 ACAAAAGGATCAGGTCTCGAAA 57.648 40.909 0.00 0.00 0.00 3.46
729 738 4.911390 ACAAAAGGATCAGGTCTCGAAAT 58.089 39.130 0.00 0.00 0.00 2.17
730 739 5.316987 ACAAAAGGATCAGGTCTCGAAATT 58.683 37.500 0.00 0.00 0.00 1.82
731 740 5.770162 ACAAAAGGATCAGGTCTCGAAATTT 59.230 36.000 0.00 0.00 0.00 1.82
732 741 6.265422 ACAAAAGGATCAGGTCTCGAAATTTT 59.735 34.615 0.00 0.00 0.00 1.82
733 742 6.901081 AAAGGATCAGGTCTCGAAATTTTT 57.099 33.333 0.00 0.00 0.00 1.94
734 743 7.996098 AAAGGATCAGGTCTCGAAATTTTTA 57.004 32.000 0.00 0.00 0.00 1.52
735 744 7.617041 AAGGATCAGGTCTCGAAATTTTTAG 57.383 36.000 0.00 0.00 0.00 1.85
736 745 6.947464 AGGATCAGGTCTCGAAATTTTTAGA 58.053 36.000 0.00 0.00 0.00 2.10
737 746 7.394816 AGGATCAGGTCTCGAAATTTTTAGAA 58.605 34.615 0.00 0.00 0.00 2.10
738 747 7.883311 AGGATCAGGTCTCGAAATTTTTAGAAA 59.117 33.333 0.00 0.00 0.00 2.52
739 748 7.963465 GGATCAGGTCTCGAAATTTTTAGAAAC 59.037 37.037 0.00 3.21 0.00 2.78
740 749 8.622948 ATCAGGTCTCGAAATTTTTAGAAACT 57.377 30.769 5.32 4.93 0.00 2.66
741 750 9.720769 ATCAGGTCTCGAAATTTTTAGAAACTA 57.279 29.630 5.32 0.00 0.00 2.24
742 751 9.204570 TCAGGTCTCGAAATTTTTAGAAACTAG 57.795 33.333 5.32 0.00 0.00 2.57
743 752 8.443937 CAGGTCTCGAAATTTTTAGAAACTAGG 58.556 37.037 5.32 0.00 0.00 3.02
744 753 8.373220 AGGTCTCGAAATTTTTAGAAACTAGGA 58.627 33.333 5.32 0.00 0.00 2.94
745 754 9.163899 GGTCTCGAAATTTTTAGAAACTAGGAT 57.836 33.333 5.32 0.00 0.00 3.24
747 756 9.938280 TCTCGAAATTTTTAGAAACTAGGATCA 57.062 29.630 0.00 0.00 0.00 2.92
749 758 9.938280 TCGAAATTTTTAGAAACTAGGATCAGA 57.062 29.630 0.00 0.00 0.00 3.27
764 773 9.829507 ACTAGGATCAGATCTCAATTAAGTTTG 57.170 33.333 10.36 0.00 0.00 2.93
767 776 9.745018 AGGATCAGATCTCAATTAAGTTTGAAA 57.255 29.630 10.36 0.00 35.31 2.69
787 796 4.746535 AAAAAGGGTCAAAACACGGAAT 57.253 36.364 0.00 0.00 32.44 3.01
788 797 4.746535 AAAAGGGTCAAAACACGGAATT 57.253 36.364 0.00 0.00 32.44 2.17
789 798 4.746535 AAAGGGTCAAAACACGGAATTT 57.253 36.364 0.00 0.00 32.44 1.82
790 799 3.726291 AGGGTCAAAACACGGAATTTG 57.274 42.857 3.53 3.53 37.77 2.32
791 800 2.131972 GGGTCAAAACACGGAATTTGC 58.868 47.619 4.73 0.00 36.66 3.68
792 801 2.131972 GGTCAAAACACGGAATTTGCC 58.868 47.619 4.73 5.85 36.66 4.52
793 802 2.131972 GTCAAAACACGGAATTTGCCC 58.868 47.619 4.73 0.00 36.66 5.36
800 809 2.438795 GGAATTTGCCCGGCCGTA 60.439 61.111 26.12 7.20 0.00 4.02
801 810 2.478033 GGAATTTGCCCGGCCGTAG 61.478 63.158 26.12 16.51 0.00 3.51
816 825 2.440539 CGTAGGGGCTCATATGTCAC 57.559 55.000 1.90 0.00 0.00 3.67
817 826 1.000955 CGTAGGGGCTCATATGTCACC 59.999 57.143 1.90 6.75 0.00 4.02
818 827 2.047061 GTAGGGGCTCATATGTCACCA 58.953 52.381 17.16 5.10 0.00 4.17
819 828 0.839946 AGGGGCTCATATGTCACCAC 59.160 55.000 17.16 11.83 0.00 4.16
820 829 0.179018 GGGGCTCATATGTCACCACC 60.179 60.000 12.17 7.98 0.00 4.61
821 830 0.532862 GGGCTCATATGTCACCACCG 60.533 60.000 1.90 0.00 0.00 4.94
822 831 1.160329 GGCTCATATGTCACCACCGC 61.160 60.000 1.90 0.00 0.00 5.68
823 832 1.490693 GCTCATATGTCACCACCGCG 61.491 60.000 0.00 0.00 0.00 6.46
824 833 1.490693 CTCATATGTCACCACCGCGC 61.491 60.000 0.00 0.00 0.00 6.86
825 834 2.584970 ATATGTCACCACCGCGCG 60.585 61.111 25.67 25.67 0.00 6.86
826 835 3.365291 ATATGTCACCACCGCGCGT 62.365 57.895 29.95 14.24 0.00 6.01
827 836 3.975083 TATGTCACCACCGCGCGTC 62.975 63.158 29.95 9.90 0.00 5.19
835 844 4.612412 ACCGCGCGTCCTTTCCAA 62.612 61.111 29.95 0.00 0.00 3.53
836 845 4.084888 CCGCGCGTCCTTTCCAAC 62.085 66.667 29.95 0.00 0.00 3.77
837 846 3.342627 CGCGCGTCCTTTCCAACA 61.343 61.111 24.19 0.00 0.00 3.33
838 847 2.251371 GCGCGTCCTTTCCAACAC 59.749 61.111 8.43 0.00 0.00 3.32
839 848 2.251642 GCGCGTCCTTTCCAACACT 61.252 57.895 8.43 0.00 0.00 3.55
840 849 1.860078 CGCGTCCTTTCCAACACTC 59.140 57.895 0.00 0.00 0.00 3.51
841 850 1.566018 CGCGTCCTTTCCAACACTCC 61.566 60.000 0.00 0.00 0.00 3.85
842 851 0.534203 GCGTCCTTTCCAACACTCCA 60.534 55.000 0.00 0.00 0.00 3.86
843 852 1.512926 CGTCCTTTCCAACACTCCAG 58.487 55.000 0.00 0.00 0.00 3.86
844 853 1.239347 GTCCTTTCCAACACTCCAGC 58.761 55.000 0.00 0.00 0.00 4.85
845 854 0.110486 TCCTTTCCAACACTCCAGCC 59.890 55.000 0.00 0.00 0.00 4.85
846 855 0.178992 CCTTTCCAACACTCCAGCCA 60.179 55.000 0.00 0.00 0.00 4.75
847 856 1.242076 CTTTCCAACACTCCAGCCAG 58.758 55.000 0.00 0.00 0.00 4.85
848 857 0.823356 TTTCCAACACTCCAGCCAGC 60.823 55.000 0.00 0.00 0.00 4.85
849 858 2.674380 CCAACACTCCAGCCAGCC 60.674 66.667 0.00 0.00 0.00 4.85
850 859 2.113774 CAACACTCCAGCCAGCCA 59.886 61.111 0.00 0.00 0.00 4.75
851 860 1.970114 CAACACTCCAGCCAGCCAG 60.970 63.158 0.00 0.00 0.00 4.85
852 861 3.857309 AACACTCCAGCCAGCCAGC 62.857 63.158 0.00 0.00 0.00 4.85
870 879 1.518903 GCCGAAAAAGTGCAGCTCCT 61.519 55.000 0.00 0.00 0.00 3.69
872 881 1.229428 CGAAAAAGTGCAGCTCCTGA 58.771 50.000 0.00 0.00 32.44 3.86
873 882 1.196354 CGAAAAAGTGCAGCTCCTGAG 59.804 52.381 0.00 0.00 32.44 3.35
938 997 3.514309 TCCTCTCCTCCGTTAAAGAAAGG 59.486 47.826 4.24 4.24 35.67 3.11
1052 1111 0.254178 AGCCATCTCTTGCCGAACAT 59.746 50.000 0.00 0.00 0.00 2.71
1055 1114 2.478539 GCCATCTCTTGCCGAACATTTC 60.479 50.000 0.00 0.00 0.00 2.17
1056 1115 3.012518 CCATCTCTTGCCGAACATTTCT 58.987 45.455 0.00 0.00 0.00 2.52
1057 1116 3.181503 CCATCTCTTGCCGAACATTTCTG 60.182 47.826 0.00 0.00 0.00 3.02
1083 1146 1.209019 CTGTCCTGTCAGAATCCCCAG 59.791 57.143 0.00 0.00 37.61 4.45
1092 1155 1.065418 CAGAATCCCCAGGCTAAACGT 60.065 52.381 0.00 0.00 0.00 3.99
1104 1167 6.189567 CCAGGCTAAACGTTTCAATAATACG 58.810 40.000 18.42 0.00 40.85 3.06
1106 1169 7.010367 CCAGGCTAAACGTTTCAATAATACGTA 59.990 37.037 18.42 0.00 46.59 3.57
1107 1170 7.842721 CAGGCTAAACGTTTCAATAATACGTAC 59.157 37.037 18.42 0.00 46.59 3.67
1108 1171 7.761249 AGGCTAAACGTTTCAATAATACGTACT 59.239 33.333 18.42 0.00 46.59 2.73
1111 1174 6.892310 AACGTTTCAATAATACGTACTCCC 57.108 37.500 0.00 0.00 46.59 4.30
1119 1182 3.900966 AATACGTACTCCCCAAGAACC 57.099 47.619 0.00 0.00 0.00 3.62
1149 1212 3.119849 CCACAAAATCTCATGACCCGAAC 60.120 47.826 0.00 0.00 0.00 3.95
1153 1216 1.686325 ATCTCATGACCCGAACCCCG 61.686 60.000 0.00 0.00 38.18 5.73
1208 1271 3.764466 CCTCCTCCGCTTCGTGCT 61.764 66.667 2.29 0.00 40.11 4.40
1280 1343 3.072468 ATCGTCGGCGGGGAAGAA 61.072 61.111 10.62 0.00 38.89 2.52
1281 1344 3.366739 ATCGTCGGCGGGGAAGAAC 62.367 63.158 10.62 0.00 38.89 3.01
1286 1349 2.325082 CGGCGGGGAAGAACAACAG 61.325 63.158 0.00 0.00 0.00 3.16
1289 1352 1.856265 GCGGGGAAGAACAACAGCAG 61.856 60.000 0.00 0.00 0.00 4.24
1314 1377 4.498520 ATCGACTCGGCCACGCTG 62.499 66.667 2.24 0.00 40.69 5.18
1605 1668 1.219393 CGGCCTCTTCAACTCCTCC 59.781 63.158 0.00 0.00 0.00 4.30
1606 1669 1.544825 CGGCCTCTTCAACTCCTCCA 61.545 60.000 0.00 0.00 0.00 3.86
1611 1674 0.173481 TCTTCAACTCCTCCATCGCG 59.827 55.000 0.00 0.00 0.00 5.87
1694 1763 0.105224 TTCGACACCATGGTCAACGT 59.895 50.000 16.53 10.20 37.66 3.99
1898 1967 2.237751 CGAAGCGGCCCGTATTCTG 61.238 63.158 17.23 9.70 0.00 3.02
2055 2124 0.323629 CCTCCTCCTTTACCAACGCA 59.676 55.000 0.00 0.00 0.00 5.24
2058 2127 1.141254 TCCTCCTTTACCAACGCAACA 59.859 47.619 0.00 0.00 0.00 3.33
2083 2152 4.889112 TCTCGGAGCCGGCGGTAT 62.889 66.667 28.82 17.06 40.25 2.73
2199 2268 2.279851 TTCGCCTGTGTGTCCGTG 60.280 61.111 0.00 0.00 0.00 4.94
2214 2283 0.603707 CCGTGAAGAAGCTGGCAGAA 60.604 55.000 20.86 0.00 0.00 3.02
2219 2288 1.803555 GAAGAAGCTGGCAGAACTCAC 59.196 52.381 20.86 0.00 0.00 3.51
2276 2345 0.560688 AAGGGGCCAAGGAAGTTCAA 59.439 50.000 4.39 0.00 0.00 2.69
2293 2362 1.302033 AACCACAAGGAGCTGAGCG 60.302 57.895 0.00 0.00 38.69 5.03
2562 2631 0.900647 ACGGCAGTCTAGACAAGGCT 60.901 55.000 27.34 17.39 42.41 4.58
2775 2844 1.966451 CCACAACAAGAGCCCGGTC 60.966 63.158 0.00 0.00 0.00 4.79
2932 3001 0.898789 GGAGGAGACCGACAAGGACA 60.899 60.000 0.00 0.00 45.00 4.02
3039 3108 1.298859 GGCTGAACGGCGAGTTTGAT 61.299 55.000 16.62 0.00 44.35 2.57
3253 3322 2.762234 GGCGACGACGTCAGAGGAT 61.762 63.158 26.26 0.00 44.03 3.24
3326 3395 3.257393 CCGACAGAGAAAGGTGATCAAG 58.743 50.000 0.00 0.00 0.00 3.02
3329 3398 2.307098 ACAGAGAAAGGTGATCAAGGGG 59.693 50.000 0.00 0.00 0.00 4.79
3387 3457 3.189080 TGTTGTGATGTGCTTGCTCATAC 59.811 43.478 9.68 5.95 0.00 2.39
3423 3493 7.007723 GGTAATAATCCCCAATGGTGTATGAA 58.992 38.462 0.00 0.00 34.77 2.57
3486 3556 6.090358 CGTTTAAGCCGATTGTTCTTCTCTTA 59.910 38.462 0.00 0.00 0.00 2.10
3495 3565 8.507249 CCGATTGTTCTTCTCTTATTTGAAAGT 58.493 33.333 0.00 0.00 0.00 2.66
3526 3596 6.644248 TCATTTTCAGCAGATCCATATTGG 57.356 37.500 0.00 0.00 39.43 3.16
3533 3642 2.812983 GCAGATCCATATTGGCAGCTCA 60.813 50.000 0.00 0.00 37.47 4.26
3539 3648 2.696707 CCATATTGGCAGCTCATTGGTT 59.303 45.455 0.00 0.00 0.00 3.67
3541 3650 1.188863 ATTGGCAGCTCATTGGTTCC 58.811 50.000 0.00 0.00 0.00 3.62
3678 4154 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3679 4155 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3680 4156 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3681 4157 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3682 4158 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3683 4159 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3684 4160 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3685 4161 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3686 4162 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3687 4163 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3688 4164 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3689 4165 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3690 4166 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3691 4167 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3715 4191 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
3733 4209 3.517500 CTCTTATCCAGCCTTATCCCCTC 59.482 52.174 0.00 0.00 0.00 4.30
3749 4225 1.488393 CCCTCTCTTCCTCAACCCATC 59.512 57.143 0.00 0.00 0.00 3.51
3759 4235 2.373502 CCTCAACCCATCTTATCCTCCC 59.626 54.545 0.00 0.00 0.00 4.30
3760 4236 2.373502 CTCAACCCATCTTATCCTCCCC 59.626 54.545 0.00 0.00 0.00 4.81
3761 4237 2.021042 TCAACCCATCTTATCCTCCCCT 60.021 50.000 0.00 0.00 0.00 4.79
3762 4238 2.785857 CAACCCATCTTATCCTCCCCTT 59.214 50.000 0.00 0.00 0.00 3.95
3763 4239 3.166636 ACCCATCTTATCCTCCCCTTT 57.833 47.619 0.00 0.00 0.00 3.11
3804 4280 6.467677 TCAATTCTTCGTCATCTCCTCTTTT 58.532 36.000 0.00 0.00 0.00 2.27
3805 4281 6.591834 TCAATTCTTCGTCATCTCCTCTTTTC 59.408 38.462 0.00 0.00 0.00 2.29
3817 4293 3.173965 TCCTCTTTTCAGATTCGTCCCT 58.826 45.455 0.00 0.00 0.00 4.20
3826 4302 0.171231 GATTCGTCCCTTGCAAAGCC 59.829 55.000 0.00 0.00 44.44 4.35
3850 4328 3.471680 AGCATCGCCTTCTTCTATTTCC 58.528 45.455 0.00 0.00 0.00 3.13
3860 4338 5.103940 CCTTCTTCTATTTCCCTTCCCATCA 60.104 44.000 0.00 0.00 0.00 3.07
3867 4345 1.679981 TCCCTTCCCATCATCAACCA 58.320 50.000 0.00 0.00 0.00 3.67
3881 4359 1.885887 TCAACCATGCCTTAGTGTTGC 59.114 47.619 4.46 0.00 36.97 4.17
3885 4363 0.171903 CATGCCTTAGTGTTGCTGCC 59.828 55.000 0.00 0.00 0.00 4.85
3906 4384 2.165030 CAGAAGGGCCAACTATTGCAAG 59.835 50.000 6.18 0.00 0.00 4.01
3910 4388 0.890683 GGCCAACTATTGCAAGTGCT 59.109 50.000 4.94 0.00 42.66 4.40
3912 4390 1.466360 GCCAACTATTGCAAGTGCTCG 60.466 52.381 4.94 0.00 42.66 5.03
3915 4393 1.350193 ACTATTGCAAGTGCTCGTCG 58.650 50.000 4.94 0.00 42.66 5.12
3918 4396 1.617755 ATTGCAAGTGCTCGTCGACG 61.618 55.000 31.30 31.30 42.66 5.12
3933 4411 4.264638 ACGTTGCAAAGCGGTGGC 62.265 61.111 12.54 4.72 40.37 5.01
3961 4439 5.679638 GCTTCTGCAATAGGGGTTATGTTTG 60.680 44.000 0.00 0.00 39.41 2.93
4010 4488 1.094785 CAACCGGGGCTATGTTTCTG 58.905 55.000 6.32 0.00 0.00 3.02
4044 4522 3.669536 TGTCGTAATGGTCTGCAATGAA 58.330 40.909 0.00 0.00 0.00 2.57
4053 4531 0.323725 TCTGCAATGAAGGAAGGGGC 60.324 55.000 0.00 0.00 0.00 5.80
4054 4532 1.305213 TGCAATGAAGGAAGGGGCC 60.305 57.895 0.00 0.00 0.00 5.80
4061 4539 0.183731 GAAGGAAGGGGCCCTATGTG 59.816 60.000 29.08 0.00 31.13 3.21
4097 4575 1.729131 GTTGCAATGGTTGACCGCG 60.729 57.895 0.59 0.00 39.43 6.46
4098 4576 2.190170 TTGCAATGGTTGACCGCGT 61.190 52.632 4.92 0.00 39.43 6.01
4102 4580 2.190170 AATGGTTGACCGCGTTGCA 61.190 52.632 4.92 0.00 39.43 4.08
4162 4643 4.536065 GTTCAACGAAGATTGCAACATGA 58.464 39.130 0.00 0.00 0.00 3.07
4165 4646 4.275689 TCAACGAAGATTGCAACATGACTT 59.724 37.500 0.00 2.90 0.00 3.01
4168 4649 4.083643 ACGAAGATTGCAACATGACTTCTG 60.084 41.667 0.00 10.41 33.84 3.02
4169 4650 4.083643 CGAAGATTGCAACATGACTTCTGT 60.084 41.667 0.00 0.00 33.84 3.41
4170 4651 5.561532 CGAAGATTGCAACATGACTTCTGTT 60.562 40.000 0.00 0.00 37.31 3.16
4177 4658 4.397382 CAACATGACTTCTGTTGCATACG 58.603 43.478 0.00 0.00 44.78 3.06
4178 4659 3.925379 ACATGACTTCTGTTGCATACGA 58.075 40.909 0.00 0.00 0.00 3.43
4179 4660 3.679980 ACATGACTTCTGTTGCATACGAC 59.320 43.478 0.00 0.00 0.00 4.34
4180 4661 2.683968 TGACTTCTGTTGCATACGACC 58.316 47.619 0.00 0.00 0.00 4.79
4182 4663 1.271379 ACTTCTGTTGCATACGACCGA 59.729 47.619 0.00 0.00 0.00 4.69
4183 4664 1.920574 CTTCTGTTGCATACGACCGAG 59.079 52.381 0.00 0.00 0.00 4.63
4184 4665 0.885879 TCTGTTGCATACGACCGAGT 59.114 50.000 0.00 0.00 0.00 4.18
4185 4666 0.992072 CTGTTGCATACGACCGAGTG 59.008 55.000 0.00 0.00 0.00 3.51
4186 4667 0.315886 TGTTGCATACGACCGAGTGT 59.684 50.000 0.00 0.00 0.00 3.55
4187 4668 0.989890 GTTGCATACGACCGAGTGTC 59.010 55.000 0.00 0.00 40.81 3.67
4199 4680 0.580104 CGAGTGTCGGTGTCAAAACC 59.420 55.000 0.00 0.00 36.00 3.27
4200 4681 1.658994 GAGTGTCGGTGTCAAAACCA 58.341 50.000 0.00 0.00 40.53 3.67
4201 4682 1.597663 GAGTGTCGGTGTCAAAACCAG 59.402 52.381 0.00 0.00 40.53 4.00
4202 4683 0.028902 GTGTCGGTGTCAAAACCAGC 59.971 55.000 0.00 0.00 40.53 4.85
4204 4685 2.637025 CGGTGTCAAAACCAGCGG 59.363 61.111 4.26 0.00 46.71 5.52
4205 4686 1.890041 CGGTGTCAAAACCAGCGGA 60.890 57.895 4.26 0.00 46.71 5.54
4206 4687 1.234615 CGGTGTCAAAACCAGCGGAT 61.235 55.000 4.26 0.00 46.71 4.18
4207 4688 0.521735 GGTGTCAAAACCAGCGGATC 59.478 55.000 1.50 0.00 40.22 3.36
4208 4689 1.523758 GTGTCAAAACCAGCGGATCT 58.476 50.000 1.50 0.00 0.00 2.75
4209 4690 1.464997 GTGTCAAAACCAGCGGATCTC 59.535 52.381 1.50 0.00 0.00 2.75
4210 4691 0.721718 GTCAAAACCAGCGGATCTCG 59.278 55.000 1.50 0.00 42.76 4.04
4211 4692 0.391130 TCAAAACCAGCGGATCTCGG 60.391 55.000 1.50 0.00 39.69 4.63
4212 4693 1.078426 AAAACCAGCGGATCTCGGG 60.078 57.895 1.50 4.86 39.69 5.14
4213 4694 1.838073 AAAACCAGCGGATCTCGGGT 61.838 55.000 1.50 5.41 39.69 5.28
4214 4695 0.974010 AAACCAGCGGATCTCGGGTA 60.974 55.000 9.72 0.00 39.69 3.69
4215 4696 1.392710 AACCAGCGGATCTCGGGTAG 61.393 60.000 9.72 0.00 39.69 3.18
4216 4697 2.565645 CCAGCGGATCTCGGGTAGG 61.566 68.421 5.87 0.00 39.69 3.18
4217 4698 2.203509 AGCGGATCTCGGGTAGGG 60.204 66.667 5.87 0.00 39.69 3.53
4218 4699 3.303928 GCGGATCTCGGGTAGGGG 61.304 72.222 5.87 0.00 39.69 4.79
4219 4700 2.197875 CGGATCTCGGGTAGGGGT 59.802 66.667 0.00 0.00 34.75 4.95
4220 4701 1.457079 CGGATCTCGGGTAGGGGTT 60.457 63.158 0.00 0.00 34.75 4.11
4221 4702 1.461911 CGGATCTCGGGTAGGGGTTC 61.462 65.000 0.00 0.00 34.75 3.62
4222 4703 1.120184 GGATCTCGGGTAGGGGTTCC 61.120 65.000 0.00 0.00 0.00 3.62
4223 4704 1.074699 ATCTCGGGTAGGGGTTCCC 60.075 63.158 0.00 0.00 45.90 3.97
4232 4713 2.671963 GGGGTTCCCGAACTGTGC 60.672 66.667 7.47 0.00 40.94 4.57
4233 4714 2.112297 GGGTTCCCGAACTGTGCA 59.888 61.111 7.47 0.00 40.94 4.57
4234 4715 1.303317 GGGTTCCCGAACTGTGCAT 60.303 57.895 7.47 0.00 40.94 3.96
4235 4716 1.305930 GGGTTCCCGAACTGTGCATC 61.306 60.000 7.47 0.00 40.94 3.91
4236 4717 0.321653 GGTTCCCGAACTGTGCATCT 60.322 55.000 7.47 0.00 40.94 2.90
4237 4718 1.066430 GGTTCCCGAACTGTGCATCTA 60.066 52.381 7.47 0.00 40.94 1.98
4238 4719 2.614481 GGTTCCCGAACTGTGCATCTAA 60.614 50.000 7.47 0.00 40.94 2.10
4239 4720 2.672961 TCCCGAACTGTGCATCTAAG 57.327 50.000 0.00 0.00 0.00 2.18
4240 4721 1.207089 TCCCGAACTGTGCATCTAAGG 59.793 52.381 0.00 0.00 0.00 2.69
4241 4722 1.066143 CCCGAACTGTGCATCTAAGGT 60.066 52.381 0.00 0.00 0.00 3.50
4242 4723 2.271800 CCGAACTGTGCATCTAAGGTC 58.728 52.381 0.00 0.00 0.00 3.85
4243 4724 1.920574 CGAACTGTGCATCTAAGGTCG 59.079 52.381 12.56 12.56 43.85 4.79
4244 4725 3.232213 GAACTGTGCATCTAAGGTCGA 57.768 47.619 0.00 0.00 0.00 4.20
4245 4726 3.786635 GAACTGTGCATCTAAGGTCGAT 58.213 45.455 0.00 0.00 0.00 3.59
4246 4727 3.170791 ACTGTGCATCTAAGGTCGATG 57.829 47.619 0.00 0.00 40.87 3.84
4247 4728 2.159043 ACTGTGCATCTAAGGTCGATGG 60.159 50.000 0.00 0.00 38.88 3.51
4248 4729 1.831106 TGTGCATCTAAGGTCGATGGT 59.169 47.619 0.00 0.00 38.88 3.55
4249 4730 3.028130 TGTGCATCTAAGGTCGATGGTA 58.972 45.455 0.00 0.00 38.88 3.25
4250 4731 3.449377 TGTGCATCTAAGGTCGATGGTAA 59.551 43.478 0.00 0.00 38.88 2.85
4251 4732 3.802685 GTGCATCTAAGGTCGATGGTAAC 59.197 47.826 0.00 0.00 38.88 2.50
4263 4744 3.082619 TGGTAACAGGAGACAGGGG 57.917 57.895 0.00 0.00 46.17 4.79
4264 4745 0.490017 TGGTAACAGGAGACAGGGGA 59.510 55.000 0.00 0.00 46.17 4.81
4265 4746 0.903236 GGTAACAGGAGACAGGGGAC 59.097 60.000 0.00 0.00 0.00 4.46
4266 4747 1.640917 GTAACAGGAGACAGGGGACA 58.359 55.000 0.00 0.00 0.00 4.02
4267 4748 1.275573 GTAACAGGAGACAGGGGACAC 59.724 57.143 0.00 0.00 0.00 3.67
4268 4749 0.399949 AACAGGAGACAGGGGACACA 60.400 55.000 0.00 0.00 0.00 3.72
4269 4750 0.399949 ACAGGAGACAGGGGACACAA 60.400 55.000 0.00 0.00 0.00 3.33
4270 4751 0.987294 CAGGAGACAGGGGACACAAT 59.013 55.000 0.00 0.00 0.00 2.71
4271 4752 0.987294 AGGAGACAGGGGACACAATG 59.013 55.000 0.00 0.00 0.00 2.82
4272 4753 0.693049 GGAGACAGGGGACACAATGT 59.307 55.000 0.00 0.00 0.00 2.71
4273 4754 1.611673 GGAGACAGGGGACACAATGTG 60.612 57.143 12.40 12.40 39.75 3.21
4284 4765 2.858745 ACACAATGTGTACCCAGGTTC 58.141 47.619 18.40 0.00 45.56 3.62
4285 4766 1.804151 CACAATGTGTACCCAGGTTCG 59.196 52.381 5.00 0.00 0.00 3.95
4286 4767 1.271163 ACAATGTGTACCCAGGTTCGG 60.271 52.381 0.00 0.00 0.00 4.30
4294 4775 3.787001 CCAGGTTCGGGCCCTCTC 61.787 72.222 22.43 9.34 0.00 3.20
4295 4776 2.685380 CAGGTTCGGGCCCTCTCT 60.685 66.667 22.43 9.12 0.00 3.10
4296 4777 1.381327 CAGGTTCGGGCCCTCTCTA 60.381 63.158 22.43 0.00 0.00 2.43
4297 4778 0.760945 CAGGTTCGGGCCCTCTCTAT 60.761 60.000 22.43 0.00 0.00 1.98
4298 4779 0.760945 AGGTTCGGGCCCTCTCTATG 60.761 60.000 22.43 1.43 0.00 2.23
4299 4780 1.749033 GTTCGGGCCCTCTCTATGG 59.251 63.158 22.43 0.54 0.00 2.74
4300 4781 0.759436 GTTCGGGCCCTCTCTATGGA 60.759 60.000 22.43 3.53 0.00 3.41
4301 4782 0.470080 TTCGGGCCCTCTCTATGGAG 60.470 60.000 22.43 0.00 40.73 3.86
4311 4792 5.278127 CCTCTCTATGGAGGTAATACCCT 57.722 47.826 5.71 0.00 45.65 4.34
4312 4793 6.404426 CCTCTCTATGGAGGTAATACCCTA 57.596 45.833 5.71 0.00 45.65 3.53
4313 4794 6.189133 CCTCTCTATGGAGGTAATACCCTAC 58.811 48.000 5.71 0.00 45.65 3.18
4314 4795 6.011451 CCTCTCTATGGAGGTAATACCCTACT 60.011 46.154 5.71 0.00 45.65 2.57
4315 4796 7.417811 TCTCTATGGAGGTAATACCCTACTT 57.582 40.000 5.71 0.00 39.75 2.24
4316 4797 7.468496 TCTCTATGGAGGTAATACCCTACTTC 58.532 42.308 5.71 0.00 39.75 3.01
4317 4798 6.559429 TCTATGGAGGTAATACCCTACTTCC 58.441 44.000 5.71 6.77 44.47 3.46
4318 4799 4.913154 TGGAGGTAATACCCTACTTCCT 57.087 45.455 13.63 0.00 44.50 3.36
4319 4800 4.553678 TGGAGGTAATACCCTACTTCCTG 58.446 47.826 13.63 0.00 44.50 3.86
4320 4801 3.324268 GGAGGTAATACCCTACTTCCTGC 59.676 52.174 5.71 0.00 42.18 4.85
4321 4802 4.224762 GAGGTAATACCCTACTTCCTGCT 58.775 47.826 5.71 0.00 39.75 4.24
4322 4803 4.632292 AGGTAATACCCTACTTCCTGCTT 58.368 43.478 5.71 0.00 39.75 3.91
4323 4804 4.409247 AGGTAATACCCTACTTCCTGCTTG 59.591 45.833 5.71 0.00 39.75 4.01
4324 4805 4.407945 GGTAATACCCTACTTCCTGCTTGA 59.592 45.833 0.00 0.00 30.04 3.02
4325 4806 5.071923 GGTAATACCCTACTTCCTGCTTGAT 59.928 44.000 0.00 0.00 30.04 2.57
4326 4807 5.717119 AATACCCTACTTCCTGCTTGATT 57.283 39.130 0.00 0.00 0.00 2.57
4327 4808 3.356529 ACCCTACTTCCTGCTTGATTG 57.643 47.619 0.00 0.00 0.00 2.67
4328 4809 2.912956 ACCCTACTTCCTGCTTGATTGA 59.087 45.455 0.00 0.00 0.00 2.57
4329 4810 3.525199 ACCCTACTTCCTGCTTGATTGAT 59.475 43.478 0.00 0.00 0.00 2.57
4330 4811 4.133078 CCCTACTTCCTGCTTGATTGATC 58.867 47.826 0.00 0.00 0.00 2.92
4331 4812 4.141528 CCCTACTTCCTGCTTGATTGATCT 60.142 45.833 0.00 0.00 0.00 2.75
4332 4813 5.435291 CCTACTTCCTGCTTGATTGATCTT 58.565 41.667 0.00 0.00 0.00 2.40
4333 4814 5.296283 CCTACTTCCTGCTTGATTGATCTTG 59.704 44.000 0.00 0.00 0.00 3.02
4334 4815 4.914983 ACTTCCTGCTTGATTGATCTTGA 58.085 39.130 0.00 0.00 0.00 3.02
4335 4816 5.507637 ACTTCCTGCTTGATTGATCTTGAT 58.492 37.500 0.00 0.00 0.00 2.57
4336 4817 5.357314 ACTTCCTGCTTGATTGATCTTGATG 59.643 40.000 0.00 0.00 0.00 3.07
4337 4818 4.851843 TCCTGCTTGATTGATCTTGATGT 58.148 39.130 0.00 0.00 0.00 3.06
4338 4819 5.993055 TCCTGCTTGATTGATCTTGATGTA 58.007 37.500 0.00 0.00 0.00 2.29
4339 4820 6.598503 TCCTGCTTGATTGATCTTGATGTAT 58.401 36.000 0.00 0.00 0.00 2.29
4340 4821 7.738847 TCCTGCTTGATTGATCTTGATGTATA 58.261 34.615 0.00 0.00 0.00 1.47
4341 4822 8.380867 TCCTGCTTGATTGATCTTGATGTATAT 58.619 33.333 0.00 0.00 0.00 0.86
4342 4823 8.451748 CCTGCTTGATTGATCTTGATGTATATG 58.548 37.037 0.00 0.00 0.00 1.78
4343 4824 9.216117 CTGCTTGATTGATCTTGATGTATATGA 57.784 33.333 0.00 0.00 0.00 2.15
4344 4825 9.216117 TGCTTGATTGATCTTGATGTATATGAG 57.784 33.333 0.00 0.00 0.00 2.90
4345 4826 8.176365 GCTTGATTGATCTTGATGTATATGAGC 58.824 37.037 0.00 0.00 0.00 4.26
4346 4827 9.216117 CTTGATTGATCTTGATGTATATGAGCA 57.784 33.333 0.00 0.00 0.00 4.26
4347 4828 9.734984 TTGATTGATCTTGATGTATATGAGCAT 57.265 29.630 0.00 0.00 0.00 3.79
4348 4829 9.734984 TGATTGATCTTGATGTATATGAGCATT 57.265 29.630 0.00 0.00 0.00 3.56
4355 4836 9.702494 TCTTGATGTATATGAGCATTACAAGAG 57.298 33.333 0.00 0.00 34.22 2.85
4356 4837 9.486497 CTTGATGTATATGAGCATTACAAGAGT 57.514 33.333 0.00 0.00 32.94 3.24
4357 4838 9.836864 TTGATGTATATGAGCATTACAAGAGTT 57.163 29.630 0.00 0.00 0.00 3.01
4358 4839 9.264719 TGATGTATATGAGCATTACAAGAGTTG 57.735 33.333 0.00 0.00 0.00 3.16
4359 4840 9.481340 GATGTATATGAGCATTACAAGAGTTGA 57.519 33.333 0.00 0.00 0.00 3.18
4361 4842 9.481340 TGTATATGAGCATTACAAGAGTTGATC 57.519 33.333 0.00 0.00 0.00 2.92
4362 4843 9.703892 GTATATGAGCATTACAAGAGTTGATCT 57.296 33.333 0.00 0.00 41.27 2.75
4364 4845 9.703892 ATATGAGCATTACAAGAGTTGATCTAC 57.296 33.333 0.00 0.00 37.23 2.59
4365 4846 6.341316 TGAGCATTACAAGAGTTGATCTACC 58.659 40.000 3.54 0.00 37.23 3.18
4366 4847 6.070824 TGAGCATTACAAGAGTTGATCTACCA 60.071 38.462 3.54 0.00 37.23 3.25
4367 4848 6.109359 AGCATTACAAGAGTTGATCTACCAC 58.891 40.000 3.54 0.00 37.23 4.16
4368 4849 5.005779 GCATTACAAGAGTTGATCTACCACG 59.994 44.000 3.54 0.00 37.23 4.94
4369 4850 5.970317 TTACAAGAGTTGATCTACCACGA 57.030 39.130 3.54 0.00 37.23 4.35
4370 4851 4.442375 ACAAGAGTTGATCTACCACGAG 57.558 45.455 3.54 1.07 37.23 4.18
4371 4852 4.079970 ACAAGAGTTGATCTACCACGAGA 58.920 43.478 3.54 0.00 37.23 4.04
4372 4853 4.707448 ACAAGAGTTGATCTACCACGAGAT 59.293 41.667 3.54 0.00 37.23 2.75
4379 4860 4.335082 GATCTACCACGAGATCGAGATG 57.665 50.000 9.58 0.00 41.79 2.90
4380 4861 2.495084 TCTACCACGAGATCGAGATGG 58.505 52.381 9.58 8.87 43.02 3.51
4381 4862 0.952280 TACCACGAGATCGAGATGGC 59.048 55.000 9.58 0.00 43.02 4.40
4382 4863 0.753479 ACCACGAGATCGAGATGGCT 60.753 55.000 9.58 0.00 43.02 4.75
4383 4864 1.239347 CCACGAGATCGAGATGGCTA 58.761 55.000 9.58 0.00 43.02 3.93
4384 4865 1.609072 CCACGAGATCGAGATGGCTAA 59.391 52.381 9.58 0.00 43.02 3.09
4385 4866 2.034685 CCACGAGATCGAGATGGCTAAA 59.965 50.000 9.58 0.00 43.02 1.85
4386 4867 3.046390 CACGAGATCGAGATGGCTAAAC 58.954 50.000 9.58 0.00 43.02 2.01
4387 4868 2.034812 ACGAGATCGAGATGGCTAAACC 59.965 50.000 9.58 0.00 43.02 3.27
4388 4869 2.608261 CGAGATCGAGATGGCTAAACCC 60.608 54.545 0.00 0.00 43.02 4.11
4389 4870 2.630580 GAGATCGAGATGGCTAAACCCT 59.369 50.000 0.00 0.00 37.83 4.34
4390 4871 3.827302 GAGATCGAGATGGCTAAACCCTA 59.173 47.826 0.00 0.00 37.83 3.53
4391 4872 4.223953 AGATCGAGATGGCTAAACCCTAA 58.776 43.478 0.00 0.00 37.83 2.69
4392 4873 4.654262 AGATCGAGATGGCTAAACCCTAAA 59.346 41.667 0.00 0.00 37.83 1.85
4393 4874 4.829872 TCGAGATGGCTAAACCCTAAAA 57.170 40.909 0.00 0.00 37.83 1.52
4394 4875 4.766375 TCGAGATGGCTAAACCCTAAAAG 58.234 43.478 0.00 0.00 37.83 2.27
4395 4876 3.312697 CGAGATGGCTAAACCCTAAAAGC 59.687 47.826 0.00 0.00 37.83 3.51
4401 4882 2.950309 GCTAAACCCTAAAAGCCTAGCC 59.050 50.000 0.00 0.00 0.00 3.93
4402 4883 3.371702 GCTAAACCCTAAAAGCCTAGCCT 60.372 47.826 0.00 0.00 0.00 4.58
4403 4884 2.808906 AACCCTAAAAGCCTAGCCTG 57.191 50.000 0.00 0.00 0.00 4.85
4404 4885 1.670059 ACCCTAAAAGCCTAGCCTGT 58.330 50.000 0.00 0.00 0.00 4.00
4405 4886 2.841795 ACCCTAAAAGCCTAGCCTGTA 58.158 47.619 0.00 0.00 0.00 2.74
4406 4887 3.394645 ACCCTAAAAGCCTAGCCTGTAT 58.605 45.455 0.00 0.00 0.00 2.29
4407 4888 3.136626 ACCCTAAAAGCCTAGCCTGTATG 59.863 47.826 0.00 0.00 0.00 2.39
4408 4889 3.391296 CCCTAAAAGCCTAGCCTGTATGA 59.609 47.826 0.00 0.00 0.00 2.15
4409 4890 4.381411 CCTAAAAGCCTAGCCTGTATGAC 58.619 47.826 0.00 0.00 0.00 3.06
4410 4891 4.101741 CCTAAAAGCCTAGCCTGTATGACT 59.898 45.833 0.00 0.00 0.00 3.41
4411 4892 5.304614 CCTAAAAGCCTAGCCTGTATGACTA 59.695 44.000 0.00 0.00 0.00 2.59
4412 4893 5.896073 AAAAGCCTAGCCTGTATGACTAT 57.104 39.130 0.00 0.00 0.00 2.12
4413 4894 4.881019 AAGCCTAGCCTGTATGACTATG 57.119 45.455 0.00 0.00 0.00 2.23
4414 4895 3.169099 AGCCTAGCCTGTATGACTATGG 58.831 50.000 0.00 0.00 0.00 2.74
4415 4896 2.900546 GCCTAGCCTGTATGACTATGGT 59.099 50.000 0.00 0.00 0.00 3.55
4416 4897 4.087182 GCCTAGCCTGTATGACTATGGTA 58.913 47.826 0.00 0.00 0.00 3.25
4417 4898 4.527038 GCCTAGCCTGTATGACTATGGTAA 59.473 45.833 0.00 0.00 0.00 2.85
4418 4899 5.187967 GCCTAGCCTGTATGACTATGGTAAT 59.812 44.000 0.00 0.00 0.00 1.89
4419 4900 6.634805 CCTAGCCTGTATGACTATGGTAATG 58.365 44.000 0.00 0.00 0.00 1.90
4420 4901 6.437477 CCTAGCCTGTATGACTATGGTAATGA 59.563 42.308 0.00 0.00 0.00 2.57
4421 4902 6.942163 AGCCTGTATGACTATGGTAATGAT 57.058 37.500 0.00 0.00 0.00 2.45
4422 4903 7.321717 AGCCTGTATGACTATGGTAATGATT 57.678 36.000 0.00 0.00 0.00 2.57
4423 4904 7.164122 AGCCTGTATGACTATGGTAATGATTG 58.836 38.462 0.00 0.00 0.00 2.67
4424 4905 6.936900 GCCTGTATGACTATGGTAATGATTGT 59.063 38.462 0.00 0.00 0.00 2.71
4425 4906 7.118390 GCCTGTATGACTATGGTAATGATTGTC 59.882 40.741 0.00 0.00 0.00 3.18
4426 4907 7.604164 CCTGTATGACTATGGTAATGATTGTCC 59.396 40.741 0.00 0.00 0.00 4.02
4427 4908 7.450074 TGTATGACTATGGTAATGATTGTCCC 58.550 38.462 0.00 0.00 0.00 4.46
4428 4909 5.304686 TGACTATGGTAATGATTGTCCCC 57.695 43.478 0.00 0.00 0.00 4.81
4429 4910 4.104102 TGACTATGGTAATGATTGTCCCCC 59.896 45.833 0.00 0.00 0.00 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 5.008019 ACATGTCAAGCGAATATGATTGGTC 59.992 40.000 0.00 0.00 35.99 4.02
8 9 4.707105 TCCACATGTCAAGCGAATATGAT 58.293 39.130 0.00 0.00 0.00 2.45
18 19 1.081892 CTCGGCTTCCACATGTCAAG 58.918 55.000 0.00 2.31 0.00 3.02
55 56 9.167311 AGTTCGGCTCCATATTTAAATATCATC 57.833 33.333 16.25 7.43 29.35 2.92
118 119 4.567971 TCGGTTTTATGTCTTCGGCTTTA 58.432 39.130 0.00 0.00 0.00 1.85
171 173 0.324738 CAGGACTCCCTCAGTAGCCA 60.325 60.000 0.00 0.00 42.02 4.75
191 193 0.033503 CGCCCAGAAACCCCCTAATT 60.034 55.000 0.00 0.00 0.00 1.40
196 198 4.735358 GGACGCCCAGAAACCCCC 62.735 72.222 0.00 0.00 0.00 5.40
203 205 4.853142 ATAGCCCGGACGCCCAGA 62.853 66.667 0.73 0.00 0.00 3.86
250 252 4.348168 GGGAAGGCCTTCTATCTTGTATCA 59.652 45.833 37.72 0.00 39.45 2.15
316 319 8.451908 AGAAAGGAATCTTTATATCCAAACGG 57.548 34.615 0.00 0.00 42.72 4.44
371 375 5.895534 TCCGGTTTATATAGACACAAGAGGT 59.104 40.000 0.00 0.00 0.00 3.85
377 381 4.549668 ACCCTCCGGTTTATATAGACACA 58.450 43.478 0.00 0.00 40.58 3.72
447 452 6.010850 TCTACCTTGAGATCGTAATGGCTAT 58.989 40.000 0.00 0.00 0.00 2.97
464 469 5.785940 AGGGTTACAAGAGTTGATCTACCTT 59.214 40.000 3.54 4.78 37.23 3.50
499 505 6.367983 AGCCTATTTCCTGCTTGATTGATTA 58.632 36.000 0.00 0.00 29.17 1.75
501 507 4.801164 AGCCTATTTCCTGCTTGATTGAT 58.199 39.130 0.00 0.00 29.17 2.57
517 523 7.311360 GCCTTCTTAATGGAGGTAATAGCCTAT 60.311 40.741 0.00 0.00 39.34 2.57
522 528 5.561679 GGGCCTTCTTAATGGAGGTAATAG 58.438 45.833 0.84 0.00 0.00 1.73
550 556 3.226777 CAAGGGACACAATGTTACCCAA 58.773 45.455 21.09 0.00 42.62 4.12
590 598 1.318576 TCTGAACTGTGCGTCTCAGA 58.681 50.000 13.32 5.30 37.40 3.27
593 601 1.140816 GGTTCTGAACTGTGCGTCTC 58.859 55.000 19.05 0.00 0.00 3.36
607 615 3.885976 TGATCTCGGATAGGAGGTTCT 57.114 47.619 0.00 0.00 34.74 3.01
609 617 3.508012 CGATTGATCTCGGATAGGAGGTT 59.492 47.826 0.00 0.00 35.03 3.50
627 636 3.430333 GTGTTGGTGTCAAAACCGATT 57.570 42.857 0.00 0.00 43.73 3.34
654 663 3.006728 TACCGTCAGGGGCCTTGG 61.007 66.667 16.40 2.03 43.47 3.61
655 664 2.584608 CTACCGTCAGGGGCCTTG 59.415 66.667 9.81 9.81 43.47 3.61
656 665 2.687566 CCTACCGTCAGGGGCCTT 60.688 66.667 0.84 0.00 43.47 4.35
659 668 1.408453 AATAGCCTACCGTCAGGGGC 61.408 60.000 0.00 0.00 42.89 5.80
660 669 1.617357 GTAATAGCCTACCGTCAGGGG 59.383 57.143 2.07 0.00 43.47 4.79
661 670 2.557490 GAGTAATAGCCTACCGTCAGGG 59.443 54.545 2.07 0.00 43.47 4.45
662 671 2.557490 GGAGTAATAGCCTACCGTCAGG 59.443 54.545 0.00 0.00 45.13 3.86
663 672 2.557490 GGGAGTAATAGCCTACCGTCAG 59.443 54.545 0.00 0.00 0.00 3.51
664 673 2.176364 AGGGAGTAATAGCCTACCGTCA 59.824 50.000 0.00 0.00 38.04 4.35
665 674 2.874014 AGGGAGTAATAGCCTACCGTC 58.126 52.381 0.00 0.00 38.04 4.79
666 675 3.499382 GGTAGGGAGTAATAGCCTACCGT 60.499 52.174 2.45 0.00 41.98 4.83
667 676 3.087781 GGTAGGGAGTAATAGCCTACCG 58.912 54.545 2.45 0.00 41.98 4.02
668 677 3.087781 CGGTAGGGAGTAATAGCCTACC 58.912 54.545 6.31 6.31 45.44 3.18
669 678 2.491298 GCGGTAGGGAGTAATAGCCTAC 59.509 54.545 0.00 0.00 34.41 3.18
670 679 2.556114 GGCGGTAGGGAGTAATAGCCTA 60.556 54.545 0.00 0.00 40.12 3.93
671 680 1.630223 GCGGTAGGGAGTAATAGCCT 58.370 55.000 0.00 0.00 0.00 4.58
672 681 0.607112 GGCGGTAGGGAGTAATAGCC 59.393 60.000 0.00 0.00 36.32 3.93
673 682 1.335145 TGGCGGTAGGGAGTAATAGC 58.665 55.000 0.00 0.00 0.00 2.97
674 683 2.233922 CCATGGCGGTAGGGAGTAATAG 59.766 54.545 0.00 0.00 0.00 1.73
675 684 2.158279 TCCATGGCGGTAGGGAGTAATA 60.158 50.000 6.96 0.00 35.57 0.98
676 685 1.056660 CCATGGCGGTAGGGAGTAAT 58.943 55.000 0.00 0.00 0.00 1.89
677 686 0.031917 TCCATGGCGGTAGGGAGTAA 60.032 55.000 6.96 0.00 35.57 2.24
678 687 0.757935 GTCCATGGCGGTAGGGAGTA 60.758 60.000 6.96 0.00 30.03 2.59
679 688 2.064581 GTCCATGGCGGTAGGGAGT 61.065 63.158 6.96 0.00 30.03 3.85
680 689 2.808206 GGTCCATGGCGGTAGGGAG 61.808 68.421 6.96 0.00 30.03 4.30
681 690 2.766651 GGTCCATGGCGGTAGGGA 60.767 66.667 6.96 0.00 35.57 4.20
682 691 2.768344 AGGTCCATGGCGGTAGGG 60.768 66.667 6.96 0.00 35.57 3.53
683 692 2.505982 CAGGTCCATGGCGGTAGG 59.494 66.667 6.96 0.00 35.57 3.18
684 693 2.505982 CCAGGTCCATGGCGGTAG 59.494 66.667 6.96 0.00 35.57 3.18
690 699 0.327924 TGTTACAGCCAGGTCCATGG 59.672 55.000 4.97 4.97 43.72 3.66
691 700 2.198827 TTGTTACAGCCAGGTCCATG 57.801 50.000 0.00 0.00 0.00 3.66
692 701 2.969821 TTTGTTACAGCCAGGTCCAT 57.030 45.000 0.00 0.00 0.00 3.41
693 702 2.582052 CTTTTGTTACAGCCAGGTCCA 58.418 47.619 0.00 0.00 0.00 4.02
694 703 1.886542 CCTTTTGTTACAGCCAGGTCC 59.113 52.381 0.00 0.00 0.00 4.46
695 704 2.858745 TCCTTTTGTTACAGCCAGGTC 58.141 47.619 6.49 0.00 0.00 3.85
696 705 3.181434 TGATCCTTTTGTTACAGCCAGGT 60.181 43.478 6.49 0.00 0.00 4.00
697 706 3.420893 TGATCCTTTTGTTACAGCCAGG 58.579 45.455 0.00 1.47 0.00 4.45
698 707 3.441572 CCTGATCCTTTTGTTACAGCCAG 59.558 47.826 0.00 0.00 0.00 4.85
699 708 3.181434 ACCTGATCCTTTTGTTACAGCCA 60.181 43.478 0.00 0.00 0.00 4.75
700 709 3.421844 ACCTGATCCTTTTGTTACAGCC 58.578 45.455 0.00 0.00 0.00 4.85
701 710 4.327680 AGACCTGATCCTTTTGTTACAGC 58.672 43.478 0.00 0.00 0.00 4.40
702 711 4.627467 CGAGACCTGATCCTTTTGTTACAG 59.373 45.833 0.00 0.00 0.00 2.74
703 712 4.282449 TCGAGACCTGATCCTTTTGTTACA 59.718 41.667 0.00 0.00 0.00 2.41
704 713 4.817517 TCGAGACCTGATCCTTTTGTTAC 58.182 43.478 0.00 0.00 0.00 2.50
705 714 5.477607 TTCGAGACCTGATCCTTTTGTTA 57.522 39.130 0.00 0.00 0.00 2.41
706 715 4.351874 TTCGAGACCTGATCCTTTTGTT 57.648 40.909 0.00 0.00 0.00 2.83
707 716 4.351874 TTTCGAGACCTGATCCTTTTGT 57.648 40.909 0.00 0.00 0.00 2.83
708 717 5.886960 AATTTCGAGACCTGATCCTTTTG 57.113 39.130 0.00 0.00 0.00 2.44
709 718 6.901081 AAAATTTCGAGACCTGATCCTTTT 57.099 33.333 0.00 0.00 0.00 2.27
710 719 6.901081 AAAAATTTCGAGACCTGATCCTTT 57.099 33.333 0.00 0.00 0.00 3.11
711 720 7.394816 TCTAAAAATTTCGAGACCTGATCCTT 58.605 34.615 0.00 0.00 0.00 3.36
712 721 6.947464 TCTAAAAATTTCGAGACCTGATCCT 58.053 36.000 0.00 0.00 0.00 3.24
713 722 7.611213 TTCTAAAAATTTCGAGACCTGATCC 57.389 36.000 0.00 0.00 0.00 3.36
714 723 8.722394 AGTTTCTAAAAATTTCGAGACCTGATC 58.278 33.333 0.00 0.00 0.00 2.92
715 724 8.622948 AGTTTCTAAAAATTTCGAGACCTGAT 57.377 30.769 0.00 0.00 0.00 2.90
716 725 9.204570 CTAGTTTCTAAAAATTTCGAGACCTGA 57.795 33.333 0.00 0.00 0.00 3.86
717 726 8.443937 CCTAGTTTCTAAAAATTTCGAGACCTG 58.556 37.037 0.00 0.00 0.00 4.00
718 727 8.373220 TCCTAGTTTCTAAAAATTTCGAGACCT 58.627 33.333 0.00 0.00 0.00 3.85
719 728 8.543862 TCCTAGTTTCTAAAAATTTCGAGACC 57.456 34.615 0.00 0.00 0.00 3.85
721 730 9.938280 TGATCCTAGTTTCTAAAAATTTCGAGA 57.062 29.630 0.00 0.00 0.00 4.04
723 732 9.938280 TCTGATCCTAGTTTCTAAAAATTTCGA 57.062 29.630 0.00 0.00 0.00 3.71
738 747 9.829507 CAAACTTAATTGAGATCTGATCCTAGT 57.170 33.333 13.83 5.24 31.84 2.57
741 750 9.745018 TTTCAAACTTAATTGAGATCTGATCCT 57.255 29.630 13.83 2.03 40.21 3.24
766 775 4.746535 ATTCCGTGTTTTGACCCTTTTT 57.253 36.364 0.00 0.00 0.00 1.94
767 776 4.746535 AATTCCGTGTTTTGACCCTTTT 57.253 36.364 0.00 0.00 0.00 2.27
768 777 4.438148 CAAATTCCGTGTTTTGACCCTTT 58.562 39.130 0.00 0.00 35.34 3.11
769 778 3.739830 GCAAATTCCGTGTTTTGACCCTT 60.740 43.478 5.65 0.00 35.34 3.95
770 779 2.223947 GCAAATTCCGTGTTTTGACCCT 60.224 45.455 5.65 0.00 35.34 4.34
771 780 2.131972 GCAAATTCCGTGTTTTGACCC 58.868 47.619 5.65 0.00 35.34 4.46
772 781 2.131972 GGCAAATTCCGTGTTTTGACC 58.868 47.619 5.65 3.53 35.28 4.02
773 782 2.131972 GGGCAAATTCCGTGTTTTGAC 58.868 47.619 5.65 2.85 39.61 3.18
774 783 1.269309 CGGGCAAATTCCGTGTTTTGA 60.269 47.619 5.65 0.00 42.33 2.69
775 784 1.135867 CGGGCAAATTCCGTGTTTTG 58.864 50.000 0.00 0.00 42.33 2.44
776 785 0.032815 CCGGGCAAATTCCGTGTTTT 59.967 50.000 0.00 0.00 45.51 2.43
777 786 1.663173 CCGGGCAAATTCCGTGTTT 59.337 52.632 0.00 0.00 45.51 2.83
778 787 2.926420 GCCGGGCAAATTCCGTGTT 61.926 57.895 15.62 0.00 45.51 3.32
779 788 3.370231 GCCGGGCAAATTCCGTGT 61.370 61.111 15.62 0.00 45.51 4.49
780 789 4.128388 GGCCGGGCAAATTCCGTG 62.128 66.667 25.33 0.00 45.51 4.94
783 792 2.438795 TACGGCCGGGCAAATTCC 60.439 61.111 31.76 5.27 0.00 3.01
784 793 2.478033 CCTACGGCCGGGCAAATTC 61.478 63.158 31.76 1.27 0.00 2.17
785 794 2.439519 CCTACGGCCGGGCAAATT 60.440 61.111 31.76 9.01 0.00 1.82
786 795 4.499633 CCCTACGGCCGGGCAAAT 62.500 66.667 31.76 15.07 34.32 2.32
796 805 1.000955 GTGACATATGAGCCCCTACGG 59.999 57.143 10.38 0.00 0.00 4.02
797 806 1.000955 GGTGACATATGAGCCCCTACG 59.999 57.143 10.38 0.00 0.00 3.51
798 807 2.047061 TGGTGACATATGAGCCCCTAC 58.953 52.381 10.38 0.00 33.40 3.18
799 808 2.047061 GTGGTGACATATGAGCCCCTA 58.953 52.381 10.38 0.00 46.14 3.53
800 809 0.839946 GTGGTGACATATGAGCCCCT 59.160 55.000 10.38 0.00 46.14 4.79
801 810 0.179018 GGTGGTGACATATGAGCCCC 60.179 60.000 10.38 2.47 46.14 5.80
802 811 0.532862 CGGTGGTGACATATGAGCCC 60.533 60.000 10.38 6.07 46.14 5.19
803 812 1.160329 GCGGTGGTGACATATGAGCC 61.160 60.000 10.38 8.65 46.14 4.70
804 813 1.490693 CGCGGTGGTGACATATGAGC 61.491 60.000 10.38 1.49 46.14 4.26
805 814 1.490693 GCGCGGTGGTGACATATGAG 61.491 60.000 10.38 0.00 46.14 2.90
806 815 1.520564 GCGCGGTGGTGACATATGA 60.521 57.895 10.38 0.00 46.14 2.15
807 816 2.870341 CGCGCGGTGGTGACATATG 61.870 63.158 24.84 0.00 46.14 1.78
808 817 2.584970 CGCGCGGTGGTGACATAT 60.585 61.111 24.84 0.00 46.14 1.78
809 818 3.975083 GACGCGCGGTGGTGACATA 62.975 63.158 35.22 0.00 46.14 2.29
818 827 4.612412 TTGGAAAGGACGCGCGGT 62.612 61.111 35.22 19.76 0.00 5.68
819 828 4.084888 GTTGGAAAGGACGCGCGG 62.085 66.667 35.22 16.31 0.00 6.46
820 829 3.342627 TGTTGGAAAGGACGCGCG 61.343 61.111 30.96 30.96 0.00 6.86
821 830 2.171489 GAGTGTTGGAAAGGACGCGC 62.171 60.000 5.73 0.00 0.00 6.86
822 831 1.566018 GGAGTGTTGGAAAGGACGCG 61.566 60.000 3.53 3.53 0.00 6.01
823 832 0.534203 TGGAGTGTTGGAAAGGACGC 60.534 55.000 0.00 0.00 0.00 5.19
824 833 1.512926 CTGGAGTGTTGGAAAGGACG 58.487 55.000 0.00 0.00 0.00 4.79
825 834 1.239347 GCTGGAGTGTTGGAAAGGAC 58.761 55.000 0.00 0.00 0.00 3.85
826 835 0.110486 GGCTGGAGTGTTGGAAAGGA 59.890 55.000 0.00 0.00 0.00 3.36
827 836 0.178992 TGGCTGGAGTGTTGGAAAGG 60.179 55.000 0.00 0.00 0.00 3.11
828 837 1.242076 CTGGCTGGAGTGTTGGAAAG 58.758 55.000 0.00 0.00 0.00 2.62
829 838 0.823356 GCTGGCTGGAGTGTTGGAAA 60.823 55.000 0.00 0.00 0.00 3.13
830 839 1.228245 GCTGGCTGGAGTGTTGGAA 60.228 57.895 0.00 0.00 0.00 3.53
831 840 2.431683 GCTGGCTGGAGTGTTGGA 59.568 61.111 0.00 0.00 0.00 3.53
832 841 2.674380 GGCTGGCTGGAGTGTTGG 60.674 66.667 0.00 0.00 0.00 3.77
833 842 1.970114 CTGGCTGGCTGGAGTGTTG 60.970 63.158 2.00 0.00 0.00 3.33
834 843 2.433446 CTGGCTGGCTGGAGTGTT 59.567 61.111 2.00 0.00 0.00 3.32
835 844 4.341783 GCTGGCTGGCTGGAGTGT 62.342 66.667 9.98 0.00 0.00 3.55
841 850 2.482296 CTTTTTCGGCTGGCTGGCTG 62.482 60.000 15.58 10.41 39.32 4.85
842 851 2.203480 TTTTTCGGCTGGCTGGCT 60.203 55.556 15.58 0.00 39.32 4.75
843 852 2.259511 CTTTTTCGGCTGGCTGGC 59.740 61.111 7.92 7.92 37.94 4.85
844 853 1.286880 CACTTTTTCGGCTGGCTGG 59.713 57.895 0.00 0.00 0.00 4.85
845 854 1.372128 GCACTTTTTCGGCTGGCTG 60.372 57.895 0.00 0.00 0.00 4.85
846 855 1.799258 CTGCACTTTTTCGGCTGGCT 61.799 55.000 0.00 0.00 0.00 4.75
847 856 1.372128 CTGCACTTTTTCGGCTGGC 60.372 57.895 0.00 0.00 0.00 4.85
848 857 1.372128 GCTGCACTTTTTCGGCTGG 60.372 57.895 0.00 0.00 0.00 4.85
849 858 0.386478 GAGCTGCACTTTTTCGGCTG 60.386 55.000 1.02 0.00 44.27 4.85
850 859 1.518903 GGAGCTGCACTTTTTCGGCT 61.519 55.000 0.00 0.00 46.66 5.52
851 860 1.081175 GGAGCTGCACTTTTTCGGC 60.081 57.895 0.00 0.00 34.91 5.54
852 861 0.239347 CAGGAGCTGCACTTTTTCGG 59.761 55.000 8.35 0.00 0.00 4.30
853 862 1.196354 CTCAGGAGCTGCACTTTTTCG 59.804 52.381 8.35 0.00 0.00 3.46
870 879 1.485124 AGGGTGCATCACGATACTCA 58.515 50.000 0.00 0.00 34.83 3.41
872 881 2.300152 CCATAGGGTGCATCACGATACT 59.700 50.000 0.00 0.00 34.83 2.12
873 882 2.612972 CCCATAGGGTGCATCACGATAC 60.613 54.545 0.00 0.00 38.25 2.24
938 997 4.592778 AGGGAGCAAAGAGATCTTCTATCC 59.407 45.833 0.00 0.57 34.14 2.59
1052 1111 0.181114 ACAGGACAGTGCAGCAGAAA 59.819 50.000 0.00 0.00 0.00 2.52
1055 1114 0.949588 CTGACAGGACAGTGCAGCAG 60.950 60.000 0.00 0.00 33.73 4.24
1056 1115 1.070275 CTGACAGGACAGTGCAGCA 59.930 57.895 0.00 0.00 33.73 4.41
1057 1116 0.250038 TTCTGACAGGACAGTGCAGC 60.250 55.000 1.81 0.00 38.79 5.25
1083 1146 7.898946 AGTACGTATTATTGAAACGTTTAGCC 58.101 34.615 14.65 2.14 46.86 3.93
1092 1155 7.185318 TCTTGGGGAGTACGTATTATTGAAA 57.815 36.000 0.00 0.00 0.00 2.69
1104 1167 1.447314 CGCGGTTCTTGGGGAGTAC 60.447 63.158 0.00 0.00 0.00 2.73
1105 1168 2.975536 CGCGGTTCTTGGGGAGTA 59.024 61.111 0.00 0.00 0.00 2.59
1106 1169 4.699522 GCGCGGTTCTTGGGGAGT 62.700 66.667 8.83 0.00 0.00 3.85
1119 1182 2.574212 GATTTTGTGGAGCGCGCG 60.574 61.111 28.44 28.44 0.00 6.86
1153 1216 4.408821 TGGAGGTGGTGATGGCGC 62.409 66.667 0.00 0.00 0.00 6.53
1208 1271 4.405671 GCAGCAGCAGGAGGAGCA 62.406 66.667 0.00 0.00 41.58 4.26
1230 1293 2.584608 GGCGGCACCATAGACACT 59.415 61.111 3.07 0.00 38.86 3.55
1232 1295 4.155733 CGGGCGGCACCATAGACA 62.156 66.667 12.47 0.00 42.05 3.41
1263 1326 3.072468 TTCTTCCCCGCCGACGAT 61.072 61.111 0.00 0.00 43.93 3.73
1280 1343 1.572085 GATGCTGACGCTGCTGTTGT 61.572 55.000 0.00 0.00 36.97 3.32
1281 1344 1.134075 GATGCTGACGCTGCTGTTG 59.866 57.895 0.00 0.00 36.97 3.33
1286 1349 2.507992 AGTCGATGCTGACGCTGC 60.508 61.111 0.00 0.00 43.70 5.25
1289 1352 2.951745 CCGAGTCGATGCTGACGC 60.952 66.667 15.64 0.00 43.70 5.19
1314 1377 1.507174 CGTGAGGTCGGAGAAGGAC 59.493 63.158 0.00 0.00 39.69 3.85
1674 1743 1.270625 ACGTTGACCATGGTGTCGAAT 60.271 47.619 25.52 6.22 38.11 3.34
1893 1962 4.063967 TCGACGGCCACGCAGAAT 62.064 61.111 13.43 0.00 46.04 2.40
2055 2124 1.160137 GCTCCGAGACATTGCTTGTT 58.840 50.000 0.00 0.00 39.18 2.83
2058 2127 1.448540 CGGCTCCGAGACATTGCTT 60.449 57.895 1.35 0.00 42.83 3.91
2097 2166 4.435436 CTGGTGTCGCCGCTGCTA 62.435 66.667 0.00 0.00 41.21 3.49
2106 2175 1.308998 ACCTTTTCTTGCTGGTGTCG 58.691 50.000 0.00 0.00 0.00 4.35
2108 2177 2.168313 CCAAACCTTTTCTTGCTGGTGT 59.832 45.455 0.00 0.00 32.53 4.16
2166 2235 0.781787 CGAAGAACATGAACGCGACA 59.218 50.000 15.93 13.50 0.00 4.35
2199 2268 1.803555 GTGAGTTCTGCCAGCTTCTTC 59.196 52.381 0.00 0.00 0.00 2.87
2214 2283 0.961358 CGTCCTTCCTCGAGGTGAGT 60.961 60.000 30.17 0.00 43.64 3.41
2219 2288 2.356818 GATGGCGTCCTTCCTCGAGG 62.357 65.000 26.32 26.32 38.20 4.63
2276 2345 2.345244 CGCTCAGCTCCTTGTGGT 59.655 61.111 0.00 0.00 34.23 4.16
2293 2362 1.153349 GGAATCCTCTGGTCGCCAC 60.153 63.158 0.00 0.00 0.00 5.01
2376 2445 3.622826 ACGGCGTAGGTGGTTGCT 61.623 61.111 12.58 0.00 0.00 3.91
2379 2448 1.005394 CTTCACGGCGTAGGTGGTT 60.005 57.895 14.22 0.00 36.09 3.67
2553 2622 1.592223 GCCGTACAGAGCCTTGTCT 59.408 57.895 0.00 0.00 32.56 3.41
2562 2631 3.066190 CAGGGGTCGCCGTACAGA 61.066 66.667 0.00 0.00 0.00 3.41
2622 2691 2.675423 TAGGACAGCACGGACGCT 60.675 61.111 0.00 0.00 45.21 5.07
2814 2883 2.352032 GCCGGACTGCAGGTACTCT 61.352 63.158 19.93 0.00 34.60 3.24
2904 2973 0.176680 CGGTCTCCTCCCTGTCAATG 59.823 60.000 0.00 0.00 0.00 2.82
2907 2976 1.304217 GTCGGTCTCCTCCCTGTCA 60.304 63.158 0.00 0.00 0.00 3.58
2920 2989 3.637273 GGCCCTGTCCTTGTCGGT 61.637 66.667 0.00 0.00 0.00 4.69
2932 3001 4.035102 GTTCTTGCTCCCGGCCCT 62.035 66.667 0.00 0.00 40.92 5.19
3036 3105 2.142761 CAGCATCCCCTCCCGATCA 61.143 63.158 0.00 0.00 0.00 2.92
3206 3275 2.772691 GCCATCTCCTGCAGCTTGC 61.773 63.158 8.66 0.58 45.29 4.01
3311 3380 3.721087 TTCCCCTTGATCACCTTTCTC 57.279 47.619 0.00 0.00 0.00 2.87
3326 3395 1.412343 ACAACAGCACATTGTTTCCCC 59.588 47.619 0.00 0.00 39.17 4.81
3329 3398 3.768406 TCACACAACAGCACATTGTTTC 58.232 40.909 0.00 0.00 39.17 2.78
3495 3565 6.829811 TGGATCTGCTGAAAATGATAACATGA 59.170 34.615 0.00 0.00 36.79 3.07
3499 3569 9.622004 CAATATGGATCTGCTGAAAATGATAAC 57.378 33.333 0.00 0.00 0.00 1.89
3526 3596 0.598065 AAACGGAACCAATGAGCTGC 59.402 50.000 0.00 0.00 0.00 5.25
3533 3642 8.950208 TTTTCTTAATTTCAAACGGAACCAAT 57.050 26.923 0.00 0.00 34.56 3.16
3614 3724 6.890293 AGCTCTACGGAAGAAATTCCTATTT 58.110 36.000 5.55 0.00 38.96 1.40
3615 3725 6.325286 AGAGCTCTACGGAAGAAATTCCTATT 59.675 38.462 16.50 0.00 38.96 1.73
3634 3744 3.640967 AGAGAGAGAGAGAGAGAGAGCTC 59.359 52.174 5.27 5.27 41.62 4.09
3635 3745 3.640967 GAGAGAGAGAGAGAGAGAGAGCT 59.359 52.174 0.00 0.00 0.00 4.09
3636 3746 3.640967 AGAGAGAGAGAGAGAGAGAGAGC 59.359 52.174 0.00 0.00 0.00 4.09
3637 3747 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3678 4154 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3679 4155 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3680 4156 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3681 4157 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3682 4158 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3683 4159 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3684 4160 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3685 4161 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3686 4162 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3687 4163 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3688 4164 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3689 4165 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3690 4166 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3691 4167 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3715 4191 2.730254 AGAGAGGGGATAAGGCTGGATA 59.270 50.000 0.00 0.00 0.00 2.59
3733 4209 4.657969 AGGATAAGATGGGTTGAGGAAGAG 59.342 45.833 0.00 0.00 0.00 2.85
3749 4225 6.320434 AGAAGAAAGAAAGGGGAGGATAAG 57.680 41.667 0.00 0.00 0.00 1.73
3759 4235 7.559590 TTGAGAGACAAAGAAGAAAGAAAGG 57.440 36.000 0.00 0.00 35.39 3.11
3760 4236 9.662545 GAATTGAGAGACAAAGAAGAAAGAAAG 57.337 33.333 0.00 0.00 42.03 2.62
3761 4237 9.401058 AGAATTGAGAGACAAAGAAGAAAGAAA 57.599 29.630 0.00 0.00 42.03 2.52
3762 4238 8.970859 AGAATTGAGAGACAAAGAAGAAAGAA 57.029 30.769 0.00 0.00 42.03 2.52
3763 4239 8.970859 AAGAATTGAGAGACAAAGAAGAAAGA 57.029 30.769 0.00 0.00 42.03 2.52
3804 4280 2.426522 CTTTGCAAGGGACGAATCTGA 58.573 47.619 0.00 0.00 0.00 3.27
3805 4281 1.135575 GCTTTGCAAGGGACGAATCTG 60.136 52.381 10.89 0.00 0.00 2.90
3817 4293 1.878070 CGATGCTCTGGCTTTGCAA 59.122 52.632 0.00 0.00 40.24 4.08
3826 4302 2.879002 TAGAAGAAGGCGATGCTCTG 57.121 50.000 0.00 0.00 0.00 3.35
3850 4328 1.684983 GCATGGTTGATGATGGGAAGG 59.315 52.381 0.00 0.00 33.31 3.46
3860 4338 2.493278 GCAACACTAAGGCATGGTTGAT 59.507 45.455 11.43 0.00 40.86 2.57
3867 4345 0.251297 TGGCAGCAACACTAAGGCAT 60.251 50.000 0.00 0.00 0.00 4.40
3885 4363 1.838112 TGCAATAGTTGGCCCTTCTG 58.162 50.000 0.00 0.00 0.00 3.02
3896 4374 1.067846 TCGACGAGCACTTGCAATAGT 60.068 47.619 0.00 0.00 45.16 2.12
3899 4377 1.617755 CGTCGACGAGCACTTGCAAT 61.618 55.000 33.35 0.00 45.16 3.56
3906 4384 2.084763 TTTGCAACGTCGACGAGCAC 62.085 55.000 39.99 28.31 46.44 4.40
3910 4388 2.923177 CGCTTTGCAACGTCGACGA 61.923 57.895 41.52 19.00 43.02 4.20
3912 4390 2.127758 CCGCTTTGCAACGTCGAC 60.128 61.111 16.92 5.18 0.00 4.20
3915 4393 2.051345 CCACCGCTTTGCAACGTC 60.051 61.111 0.00 0.00 0.00 4.34
3918 4396 4.999939 CGGCCACCGCTTTGCAAC 63.000 66.667 2.24 0.00 41.17 4.17
3995 4473 2.432444 TGTTTCAGAAACATAGCCCCG 58.568 47.619 22.53 0.00 45.79 5.73
4019 4497 3.052455 TGCAGACCATTACGACAACAT 57.948 42.857 0.00 0.00 0.00 2.71
4020 4498 2.535012 TGCAGACCATTACGACAACA 57.465 45.000 0.00 0.00 0.00 3.33
4025 4503 3.055458 TCCTTCATTGCAGACCATTACGA 60.055 43.478 0.00 0.00 0.00 3.43
4035 4513 1.325476 GGCCCCTTCCTTCATTGCAG 61.325 60.000 0.00 0.00 0.00 4.41
4044 4522 0.552615 AACACATAGGGCCCCTTCCT 60.553 55.000 21.43 0.62 34.61 3.36
4053 4531 6.976088 TCACACATGTTTTAAACACATAGGG 58.024 36.000 13.01 7.28 45.50 3.53
4054 4532 8.081633 ACATCACACATGTTTTAAACACATAGG 58.918 33.333 13.01 3.85 45.50 2.57
4061 4539 6.580963 TGCAACATCACACATGTTTTAAAC 57.419 33.333 0.00 0.20 39.94 2.01
4102 4580 6.267471 TGAAAGAAGTCCCATTTTGCATAAGT 59.733 34.615 0.00 0.00 0.00 2.24
4143 4624 4.151258 AGTCATGTTGCAATCTTCGTTG 57.849 40.909 0.59 0.00 0.00 4.10
4162 4643 1.271379 TCGGTCGTATGCAACAGAAGT 59.729 47.619 0.00 0.00 0.00 3.01
4165 4646 0.885879 ACTCGGTCGTATGCAACAGA 59.114 50.000 0.00 0.00 0.00 3.41
4168 4649 0.989890 GACACTCGGTCGTATGCAAC 59.010 55.000 0.00 0.00 36.65 4.17
4169 4650 3.411808 GACACTCGGTCGTATGCAA 57.588 52.632 0.00 0.00 36.65 4.08
4180 4661 0.580104 GGTTTTGACACCGACACTCG 59.420 55.000 0.00 0.00 40.07 4.18
4182 4663 1.663695 CTGGTTTTGACACCGACACT 58.336 50.000 0.00 0.00 40.09 3.55
4183 4664 0.028902 GCTGGTTTTGACACCGACAC 59.971 55.000 0.00 0.00 40.09 3.67
4184 4665 1.433053 CGCTGGTTTTGACACCGACA 61.433 55.000 0.00 0.00 40.09 4.35
4185 4666 1.278637 CGCTGGTTTTGACACCGAC 59.721 57.895 0.00 0.00 40.09 4.79
4186 4667 1.890041 CCGCTGGTTTTGACACCGA 60.890 57.895 0.00 0.00 40.09 4.69
4187 4668 1.234615 ATCCGCTGGTTTTGACACCG 61.235 55.000 0.00 0.00 40.09 4.94
4188 4669 0.521735 GATCCGCTGGTTTTGACACC 59.478 55.000 0.00 0.00 37.34 4.16
4189 4670 1.464997 GAGATCCGCTGGTTTTGACAC 59.535 52.381 0.00 0.00 0.00 3.67
4190 4671 1.808411 GAGATCCGCTGGTTTTGACA 58.192 50.000 0.00 0.00 0.00 3.58
4191 4672 0.721718 CGAGATCCGCTGGTTTTGAC 59.278 55.000 0.00 0.00 0.00 3.18
4192 4673 0.391130 CCGAGATCCGCTGGTTTTGA 60.391 55.000 0.00 0.00 36.84 2.69
4193 4674 1.369091 CCCGAGATCCGCTGGTTTTG 61.369 60.000 0.00 0.00 36.84 2.44
4194 4675 1.078426 CCCGAGATCCGCTGGTTTT 60.078 57.895 0.00 0.00 36.84 2.43
4195 4676 0.974010 TACCCGAGATCCGCTGGTTT 60.974 55.000 4.92 0.00 35.12 3.27
4196 4677 1.380785 TACCCGAGATCCGCTGGTT 60.381 57.895 4.92 0.00 35.12 3.67
4197 4678 1.828660 CTACCCGAGATCCGCTGGT 60.829 63.158 4.98 4.98 36.85 4.00
4198 4679 2.565645 CCTACCCGAGATCCGCTGG 61.566 68.421 0.00 0.00 36.84 4.85
4199 4680 2.565645 CCCTACCCGAGATCCGCTG 61.566 68.421 0.00 0.00 36.84 5.18
4200 4681 2.203509 CCCTACCCGAGATCCGCT 60.204 66.667 0.00 0.00 36.84 5.52
4201 4682 3.303928 CCCCTACCCGAGATCCGC 61.304 72.222 0.00 0.00 36.84 5.54
4202 4683 1.457079 AACCCCTACCCGAGATCCG 60.457 63.158 0.00 0.00 38.18 4.18
4203 4684 1.120184 GGAACCCCTACCCGAGATCC 61.120 65.000 0.00 0.00 0.00 3.36
4204 4685 2.438730 GGAACCCCTACCCGAGATC 58.561 63.158 0.00 0.00 0.00 2.75
4205 4686 4.722389 GGAACCCCTACCCGAGAT 57.278 61.111 0.00 0.00 0.00 2.75
4218 4699 2.380084 TAGATGCACAGTTCGGGAAC 57.620 50.000 3.37 3.37 41.45 3.62
4219 4700 2.354704 CCTTAGATGCACAGTTCGGGAA 60.355 50.000 0.00 0.00 0.00 3.97
4220 4701 1.207089 CCTTAGATGCACAGTTCGGGA 59.793 52.381 0.00 0.00 0.00 5.14
4221 4702 1.066143 ACCTTAGATGCACAGTTCGGG 60.066 52.381 0.00 0.00 0.00 5.14
4222 4703 2.271800 GACCTTAGATGCACAGTTCGG 58.728 52.381 0.00 0.00 0.00 4.30
4223 4704 1.920574 CGACCTTAGATGCACAGTTCG 59.079 52.381 0.00 0.00 0.00 3.95
4224 4705 3.232213 TCGACCTTAGATGCACAGTTC 57.768 47.619 0.00 0.00 0.00 3.01
4225 4706 3.525537 CATCGACCTTAGATGCACAGTT 58.474 45.455 0.00 0.00 38.97 3.16
4226 4707 2.159043 CCATCGACCTTAGATGCACAGT 60.159 50.000 0.00 0.00 42.92 3.55
4227 4708 2.159043 ACCATCGACCTTAGATGCACAG 60.159 50.000 0.00 0.00 42.92 3.66
4228 4709 1.831106 ACCATCGACCTTAGATGCACA 59.169 47.619 0.00 0.00 42.92 4.57
4229 4710 2.604046 ACCATCGACCTTAGATGCAC 57.396 50.000 0.00 0.00 42.92 4.57
4230 4711 3.449377 TGTTACCATCGACCTTAGATGCA 59.551 43.478 0.00 0.00 42.92 3.96
4231 4712 4.051922 CTGTTACCATCGACCTTAGATGC 58.948 47.826 0.00 0.00 42.92 3.91
4232 4713 4.341235 TCCTGTTACCATCGACCTTAGATG 59.659 45.833 0.00 0.00 43.65 2.90
4233 4714 4.543689 TCCTGTTACCATCGACCTTAGAT 58.456 43.478 0.00 0.00 0.00 1.98
4234 4715 3.952323 CTCCTGTTACCATCGACCTTAGA 59.048 47.826 0.00 0.00 0.00 2.10
4235 4716 3.952323 TCTCCTGTTACCATCGACCTTAG 59.048 47.826 0.00 0.00 0.00 2.18
4236 4717 3.698040 GTCTCCTGTTACCATCGACCTTA 59.302 47.826 0.00 0.00 0.00 2.69
4237 4718 2.496470 GTCTCCTGTTACCATCGACCTT 59.504 50.000 0.00 0.00 0.00 3.50
4238 4719 2.100989 GTCTCCTGTTACCATCGACCT 58.899 52.381 0.00 0.00 0.00 3.85
4239 4720 1.822990 TGTCTCCTGTTACCATCGACC 59.177 52.381 0.00 0.00 0.00 4.79
4240 4721 2.159226 CCTGTCTCCTGTTACCATCGAC 60.159 54.545 0.00 0.00 0.00 4.20
4241 4722 2.100197 CCTGTCTCCTGTTACCATCGA 58.900 52.381 0.00 0.00 0.00 3.59
4242 4723 1.137086 CCCTGTCTCCTGTTACCATCG 59.863 57.143 0.00 0.00 0.00 3.84
4243 4724 1.486726 CCCCTGTCTCCTGTTACCATC 59.513 57.143 0.00 0.00 0.00 3.51
4244 4725 1.080498 TCCCCTGTCTCCTGTTACCAT 59.920 52.381 0.00 0.00 0.00 3.55
4245 4726 0.490017 TCCCCTGTCTCCTGTTACCA 59.510 55.000 0.00 0.00 0.00 3.25
4246 4727 0.903236 GTCCCCTGTCTCCTGTTACC 59.097 60.000 0.00 0.00 0.00 2.85
4247 4728 1.275573 GTGTCCCCTGTCTCCTGTTAC 59.724 57.143 0.00 0.00 0.00 2.50
4248 4729 1.132977 TGTGTCCCCTGTCTCCTGTTA 60.133 52.381 0.00 0.00 0.00 2.41
4249 4730 0.399949 TGTGTCCCCTGTCTCCTGTT 60.400 55.000 0.00 0.00 0.00 3.16
4250 4731 0.399949 TTGTGTCCCCTGTCTCCTGT 60.400 55.000 0.00 0.00 0.00 4.00
4251 4732 0.987294 ATTGTGTCCCCTGTCTCCTG 59.013 55.000 0.00 0.00 0.00 3.86
4252 4733 0.987294 CATTGTGTCCCCTGTCTCCT 59.013 55.000 0.00 0.00 0.00 3.69
4253 4734 0.693049 ACATTGTGTCCCCTGTCTCC 59.307 55.000 0.00 0.00 0.00 3.71
4254 4735 1.072331 ACACATTGTGTCCCCTGTCTC 59.928 52.381 16.62 0.00 43.92 3.36
4255 4736 1.140312 ACACATTGTGTCCCCTGTCT 58.860 50.000 16.62 0.00 43.92 3.41
4256 4737 2.423577 GTACACATTGTGTCCCCTGTC 58.576 52.381 24.92 5.85 43.92 3.51
4257 4738 1.073284 GGTACACATTGTGTCCCCTGT 59.927 52.381 24.92 2.52 43.92 4.00
4258 4739 1.821216 GGTACACATTGTGTCCCCTG 58.179 55.000 24.92 0.00 43.92 4.45
4261 4742 1.613255 CCTGGGTACACATTGTGTCCC 60.613 57.143 30.63 30.63 43.92 4.46
4262 4743 1.073284 ACCTGGGTACACATTGTGTCC 59.927 52.381 24.92 22.47 43.92 4.02
4263 4744 2.561478 ACCTGGGTACACATTGTGTC 57.439 50.000 24.92 15.95 43.92 3.67
4265 4746 1.804151 CGAACCTGGGTACACATTGTG 59.196 52.381 15.18 15.18 39.75 3.33
4266 4747 1.271163 CCGAACCTGGGTACACATTGT 60.271 52.381 0.00 0.00 0.00 2.71
4267 4748 1.448985 CCGAACCTGGGTACACATTG 58.551 55.000 0.00 0.00 0.00 2.82
4268 4749 0.326927 CCCGAACCTGGGTACACATT 59.673 55.000 0.00 0.00 44.76 2.71
4269 4750 1.988015 CCCGAACCTGGGTACACAT 59.012 57.895 0.00 0.00 44.76 3.21
4270 4751 3.474000 CCCGAACCTGGGTACACA 58.526 61.111 0.00 0.00 44.76 3.72
4277 4758 2.873557 TAGAGAGGGCCCGAACCTGG 62.874 65.000 18.44 0.00 38.79 4.45
4278 4759 0.760945 ATAGAGAGGGCCCGAACCTG 60.761 60.000 18.44 0.00 38.79 4.00
4279 4760 0.760945 CATAGAGAGGGCCCGAACCT 60.761 60.000 18.44 14.71 42.18 3.50
4280 4761 1.749033 CATAGAGAGGGCCCGAACC 59.251 63.158 18.44 7.31 0.00 3.62
4281 4762 0.759436 TCCATAGAGAGGGCCCGAAC 60.759 60.000 18.44 12.45 0.00 3.95
4282 4763 0.470080 CTCCATAGAGAGGGCCCGAA 60.470 60.000 18.44 0.98 43.39 4.30
4283 4764 1.153989 CTCCATAGAGAGGGCCCGA 59.846 63.158 18.44 3.54 43.39 5.14
4284 4765 3.784573 CTCCATAGAGAGGGCCCG 58.215 66.667 18.44 0.00 43.39 6.13
4290 4771 7.034967 AGTAGGGTATTACCTCCATAGAGAG 57.965 44.000 12.54 0.00 43.39 3.20
4291 4772 7.417811 AAGTAGGGTATTACCTCCATAGAGA 57.582 40.000 12.54 0.00 43.39 3.10
4292 4773 6.664384 GGAAGTAGGGTATTACCTCCATAGAG 59.336 46.154 12.54 0.00 42.09 2.43
4293 4774 6.337472 AGGAAGTAGGGTATTACCTCCATAGA 59.663 42.308 16.39 0.00 42.09 1.98
4294 4775 6.437793 CAGGAAGTAGGGTATTACCTCCATAG 59.562 46.154 16.39 6.09 42.09 2.23
4295 4776 6.320518 CAGGAAGTAGGGTATTACCTCCATA 58.679 44.000 16.39 3.42 42.09 2.74
4296 4777 5.155905 CAGGAAGTAGGGTATTACCTCCAT 58.844 45.833 16.39 4.17 42.09 3.41
4297 4778 4.553678 CAGGAAGTAGGGTATTACCTCCA 58.446 47.826 16.39 0.80 42.09 3.86
4298 4779 3.324268 GCAGGAAGTAGGGTATTACCTCC 59.676 52.174 12.54 10.66 42.09 4.30
4299 4780 4.224762 AGCAGGAAGTAGGGTATTACCTC 58.775 47.826 12.54 2.11 42.09 3.85
4300 4781 4.282292 AGCAGGAAGTAGGGTATTACCT 57.718 45.455 12.54 2.07 44.75 3.08
4301 4782 4.407945 TCAAGCAGGAAGTAGGGTATTACC 59.592 45.833 4.11 4.11 37.60 2.85
4302 4783 5.609533 TCAAGCAGGAAGTAGGGTATTAC 57.390 43.478 0.00 0.00 0.00 1.89
4303 4784 6.385759 TCAATCAAGCAGGAAGTAGGGTATTA 59.614 38.462 0.00 0.00 0.00 0.98
4304 4785 5.191722 TCAATCAAGCAGGAAGTAGGGTATT 59.808 40.000 0.00 0.00 0.00 1.89
4305 4786 4.721776 TCAATCAAGCAGGAAGTAGGGTAT 59.278 41.667 0.00 0.00 0.00 2.73
4306 4787 4.101114 TCAATCAAGCAGGAAGTAGGGTA 58.899 43.478 0.00 0.00 0.00 3.69
4307 4788 2.912956 TCAATCAAGCAGGAAGTAGGGT 59.087 45.455 0.00 0.00 0.00 4.34
4308 4789 3.634397 TCAATCAAGCAGGAAGTAGGG 57.366 47.619 0.00 0.00 0.00 3.53
4309 4790 5.033589 AGATCAATCAAGCAGGAAGTAGG 57.966 43.478 0.00 0.00 0.00 3.18
4310 4791 6.111382 TCAAGATCAATCAAGCAGGAAGTAG 58.889 40.000 0.00 0.00 0.00 2.57
4311 4792 6.053632 TCAAGATCAATCAAGCAGGAAGTA 57.946 37.500 0.00 0.00 0.00 2.24
4312 4793 4.914983 TCAAGATCAATCAAGCAGGAAGT 58.085 39.130 0.00 0.00 0.00 3.01
4313 4794 5.357314 ACATCAAGATCAATCAAGCAGGAAG 59.643 40.000 0.00 0.00 0.00 3.46
4314 4795 5.258841 ACATCAAGATCAATCAAGCAGGAA 58.741 37.500 0.00 0.00 0.00 3.36
4315 4796 4.851843 ACATCAAGATCAATCAAGCAGGA 58.148 39.130 0.00 0.00 0.00 3.86
4316 4797 6.879276 ATACATCAAGATCAATCAAGCAGG 57.121 37.500 0.00 0.00 0.00 4.85
4317 4798 9.216117 TCATATACATCAAGATCAATCAAGCAG 57.784 33.333 0.00 0.00 0.00 4.24
4318 4799 9.216117 CTCATATACATCAAGATCAATCAAGCA 57.784 33.333 0.00 0.00 0.00 3.91
4319 4800 8.176365 GCTCATATACATCAAGATCAATCAAGC 58.824 37.037 0.00 0.00 0.00 4.01
4320 4801 9.216117 TGCTCATATACATCAAGATCAATCAAG 57.784 33.333 0.00 0.00 0.00 3.02
4321 4802 9.734984 ATGCTCATATACATCAAGATCAATCAA 57.265 29.630 0.00 0.00 0.00 2.57
4322 4803 9.734984 AATGCTCATATACATCAAGATCAATCA 57.265 29.630 0.00 0.00 0.00 2.57
4329 4810 9.702494 CTCTTGTAATGCTCATATACATCAAGA 57.298 33.333 0.00 0.00 36.00 3.02
4330 4811 9.486497 ACTCTTGTAATGCTCATATACATCAAG 57.514 33.333 0.00 0.00 33.05 3.02
4331 4812 9.836864 AACTCTTGTAATGCTCATATACATCAA 57.163 29.630 0.00 0.00 30.29 2.57
4332 4813 9.264719 CAACTCTTGTAATGCTCATATACATCA 57.735 33.333 0.00 0.00 30.29 3.07
4333 4814 9.481340 TCAACTCTTGTAATGCTCATATACATC 57.519 33.333 0.00 0.00 30.29 3.06
4335 4816 9.481340 GATCAACTCTTGTAATGCTCATATACA 57.519 33.333 0.00 0.00 0.00 2.29
4336 4817 9.703892 AGATCAACTCTTGTAATGCTCATATAC 57.296 33.333 0.00 0.00 0.00 1.47
4338 4819 9.703892 GTAGATCAACTCTTGTAATGCTCATAT 57.296 33.333 0.00 0.00 35.28 1.78
4339 4820 8.144478 GGTAGATCAACTCTTGTAATGCTCATA 58.856 37.037 0.00 0.00 35.28 2.15
4340 4821 6.989169 GGTAGATCAACTCTTGTAATGCTCAT 59.011 38.462 0.00 0.00 35.28 2.90
4341 4822 6.070824 TGGTAGATCAACTCTTGTAATGCTCA 60.071 38.462 0.00 0.00 35.28 4.26
4342 4823 6.256757 GTGGTAGATCAACTCTTGTAATGCTC 59.743 42.308 0.00 0.00 35.28 4.26
4343 4824 6.109359 GTGGTAGATCAACTCTTGTAATGCT 58.891 40.000 0.00 0.00 35.28 3.79
4344 4825 5.005779 CGTGGTAGATCAACTCTTGTAATGC 59.994 44.000 0.00 0.00 35.28 3.56
4345 4826 6.330278 TCGTGGTAGATCAACTCTTGTAATG 58.670 40.000 0.00 0.00 35.28 1.90
4346 4827 6.377429 TCTCGTGGTAGATCAACTCTTGTAAT 59.623 38.462 0.00 0.00 35.28 1.89
4347 4828 5.708697 TCTCGTGGTAGATCAACTCTTGTAA 59.291 40.000 0.00 0.00 35.28 2.41
4348 4829 5.250982 TCTCGTGGTAGATCAACTCTTGTA 58.749 41.667 0.00 0.00 35.28 2.41
4349 4830 4.079970 TCTCGTGGTAGATCAACTCTTGT 58.920 43.478 0.00 0.00 35.28 3.16
4350 4831 4.703645 TCTCGTGGTAGATCAACTCTTG 57.296 45.455 0.00 0.00 35.28 3.02
4358 4839 3.126171 CCATCTCGATCTCGTGGTAGATC 59.874 52.174 4.17 4.17 45.64 2.75
4359 4840 3.078097 CCATCTCGATCTCGTGGTAGAT 58.922 50.000 0.00 0.00 38.95 1.98
4360 4841 2.495084 CCATCTCGATCTCGTGGTAGA 58.505 52.381 0.00 0.00 40.80 2.59
4361 4842 1.068885 GCCATCTCGATCTCGTGGTAG 60.069 57.143 8.82 0.00 40.80 3.18
4362 4843 0.952280 GCCATCTCGATCTCGTGGTA 59.048 55.000 8.82 0.00 40.80 3.25
4363 4844 0.753479 AGCCATCTCGATCTCGTGGT 60.753 55.000 8.82 0.00 40.80 4.16
4364 4845 1.239347 TAGCCATCTCGATCTCGTGG 58.761 55.000 0.00 1.79 40.80 4.94
4365 4846 3.046390 GTTTAGCCATCTCGATCTCGTG 58.954 50.000 0.00 0.00 40.80 4.35
4366 4847 2.034812 GGTTTAGCCATCTCGATCTCGT 59.965 50.000 0.00 0.00 37.67 4.18
4367 4848 2.608261 GGGTTTAGCCATCTCGATCTCG 60.608 54.545 0.00 0.00 39.65 4.04
4368 4849 2.630580 AGGGTTTAGCCATCTCGATCTC 59.369 50.000 0.26 0.00 39.65 2.75
4369 4850 2.683768 AGGGTTTAGCCATCTCGATCT 58.316 47.619 0.26 0.00 39.65 2.75
4370 4851 4.602340 TTAGGGTTTAGCCATCTCGATC 57.398 45.455 0.26 0.00 39.65 3.69
4371 4852 5.367945 TTTTAGGGTTTAGCCATCTCGAT 57.632 39.130 0.26 0.00 39.65 3.59
4372 4853 4.766375 CTTTTAGGGTTTAGCCATCTCGA 58.234 43.478 0.26 0.00 39.65 4.04
4373 4854 3.312697 GCTTTTAGGGTTTAGCCATCTCG 59.687 47.826 0.26 0.00 39.65 4.04
4374 4855 4.902443 GCTTTTAGGGTTTAGCCATCTC 57.098 45.455 0.26 0.00 39.65 2.75
4380 4861 2.950309 GGCTAGGCTTTTAGGGTTTAGC 59.050 50.000 9.46 0.00 33.19 3.09
4381 4862 4.200092 CAGGCTAGGCTTTTAGGGTTTAG 58.800 47.826 17.59 0.00 0.00 1.85
4382 4863 3.590182 ACAGGCTAGGCTTTTAGGGTTTA 59.410 43.478 17.59 0.00 0.00 2.01
4383 4864 2.378886 ACAGGCTAGGCTTTTAGGGTTT 59.621 45.455 17.59 0.00 0.00 3.27
4384 4865 1.993301 ACAGGCTAGGCTTTTAGGGTT 59.007 47.619 17.59 0.00 0.00 4.11
4385 4866 1.670059 ACAGGCTAGGCTTTTAGGGT 58.330 50.000 17.59 7.50 0.00 4.34
4386 4867 3.391296 TCATACAGGCTAGGCTTTTAGGG 59.609 47.826 17.59 6.80 0.00 3.53
4387 4868 4.101741 AGTCATACAGGCTAGGCTTTTAGG 59.898 45.833 17.59 12.41 0.00 2.69
4388 4869 5.283457 AGTCATACAGGCTAGGCTTTTAG 57.717 43.478 17.59 7.98 0.00 1.85
4389 4870 6.239600 CCATAGTCATACAGGCTAGGCTTTTA 60.240 42.308 17.59 11.26 37.96 1.52
4390 4871 5.455326 CCATAGTCATACAGGCTAGGCTTTT 60.455 44.000 17.59 9.24 37.96 2.27
4391 4872 4.040952 CCATAGTCATACAGGCTAGGCTTT 59.959 45.833 17.59 13.54 37.96 3.51
4392 4873 3.580458 CCATAGTCATACAGGCTAGGCTT 59.420 47.826 17.59 10.76 37.96 4.35
4393 4874 3.169099 CCATAGTCATACAGGCTAGGCT 58.831 50.000 14.10 14.10 37.96 4.58
4394 4875 2.900546 ACCATAGTCATACAGGCTAGGC 59.099 50.000 8.55 8.55 37.96 3.93
4395 4876 6.437477 TCATTACCATAGTCATACAGGCTAGG 59.563 42.308 0.00 0.00 37.96 3.02
4396 4877 7.468141 TCATTACCATAGTCATACAGGCTAG 57.532 40.000 0.00 0.00 37.96 3.42
4397 4878 8.314021 CAATCATTACCATAGTCATACAGGCTA 58.686 37.037 0.00 0.00 39.11 3.93
4398 4879 6.942163 ATCATTACCATAGTCATACAGGCT 57.058 37.500 0.00 0.00 35.44 4.58
4399 4880 6.936900 ACAATCATTACCATAGTCATACAGGC 59.063 38.462 0.00 0.00 0.00 4.85
4400 4881 7.604164 GGACAATCATTACCATAGTCATACAGG 59.396 40.741 0.00 0.00 0.00 4.00
4401 4882 7.604164 GGGACAATCATTACCATAGTCATACAG 59.396 40.741 0.00 0.00 0.00 2.74
4402 4883 7.450074 GGGACAATCATTACCATAGTCATACA 58.550 38.462 0.00 0.00 0.00 2.29
4403 4884 6.879458 GGGGACAATCATTACCATAGTCATAC 59.121 42.308 0.00 0.00 0.00 2.39
4404 4885 6.012858 GGGGGACAATCATTACCATAGTCATA 60.013 42.308 0.00 0.00 0.00 2.15
4405 4886 5.222130 GGGGGACAATCATTACCATAGTCAT 60.222 44.000 0.00 0.00 0.00 3.06
4406 4887 4.104102 GGGGGACAATCATTACCATAGTCA 59.896 45.833 0.00 0.00 0.00 3.41
4407 4888 4.652822 GGGGGACAATCATTACCATAGTC 58.347 47.826 0.00 0.00 0.00 2.59
4408 4889 4.724279 GGGGGACAATCATTACCATAGT 57.276 45.455 0.00 0.00 0.00 2.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.