Multiple sequence alignment - TraesCS7A01G206900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G206900 chr7A 100.000 5462 0 0 1 5462 169314208 169308747 0.000000e+00 10087.0
1 TraesCS7A01G206900 chr7A 96.043 834 24 3 1 826 511038482 511037650 0.000000e+00 1349.0
2 TraesCS7A01G206900 chr7B 93.894 3603 168 25 1411 4994 132137231 132133662 0.000000e+00 5387.0
3 TraesCS7A01G206900 chr7B 92.995 828 42 5 1 820 678026813 678027632 0.000000e+00 1194.0
4 TraesCS7A01G206900 chr7B 94.404 554 21 5 820 1363 132138478 132137925 0.000000e+00 843.0
5 TraesCS7A01G206900 chr7B 95.562 338 4 1 5125 5462 678853346 678853020 1.040000e-146 531.0
6 TraesCS7A01G206900 chr7B 92.878 337 12 2 5125 5460 520113599 520113924 3.830000e-131 479.0
7 TraesCS7A01G206900 chr7B 87.755 98 8 4 4979 5072 173865889 173865792 1.610000e-20 111.0
8 TraesCS7A01G206900 chr7B 89.412 85 7 1 4990 5072 717332016 717332100 7.480000e-19 106.0
9 TraesCS7A01G206900 chr7B 94.545 55 1 1 5072 5124 132133647 132133593 3.510000e-12 84.2
10 TraesCS7A01G206900 chr7D 93.883 2060 77 14 820 2877 167568372 167566360 0.000000e+00 3061.0
11 TraesCS7A01G206900 chr7D 93.535 1887 92 15 2917 4793 167566372 167564506 0.000000e+00 2782.0
12 TraesCS7A01G206900 chr7D 92.086 139 8 2 4792 4928 167564474 167564337 5.580000e-45 193.0
13 TraesCS7A01G206900 chr7D 94.286 70 1 1 4926 4992 167564302 167564233 2.690000e-18 104.0
14 TraesCS7A01G206900 chr7D 94.231 52 1 1 5072 5123 167564221 167564172 1.630000e-10 78.7
15 TraesCS7A01G206900 chr6A 94.331 829 35 6 1 820 134937468 134938293 0.000000e+00 1260.0
16 TraesCS7A01G206900 chr6A 91.667 84 5 2 4991 5072 563706140 563706057 1.240000e-21 115.0
17 TraesCS7A01G206900 chr3B 86.837 547 40 14 288 820 388147971 388148499 2.840000e-162 582.0
18 TraesCS7A01G206900 chr3B 95.858 338 3 1 5125 5462 491523280 491523606 2.240000e-148 536.0
19 TraesCS7A01G206900 chr3B 94.056 286 14 3 4 288 388147645 388147928 1.090000e-116 431.0
20 TraesCS7A01G206900 chr5B 96.119 335 2 1 5128 5462 672843127 672842804 2.240000e-148 536.0
21 TraesCS7A01G206900 chr5B 94.545 330 6 1 5133 5462 341550738 341550421 2.940000e-137 499.0
22 TraesCS7A01G206900 chr5B 85.567 97 10 4 4978 5072 74672644 74672738 1.250000e-16 99.0
23 TraesCS7A01G206900 chr1B 95.858 338 3 1 5125 5462 7969723 7969397 2.240000e-148 536.0
24 TraesCS7A01G206900 chr1B 87.574 338 30 2 5125 5462 667813355 667813030 1.110000e-101 381.0
25 TraesCS7A01G206900 chr1B 97.222 36 1 0 785 820 31093154 31093189 1.640000e-05 62.1
26 TraesCS7A01G206900 chr6B 94.970 338 6 1 5125 5462 42759934 42759608 2.250000e-143 520.0
27 TraesCS7A01G206900 chr1D 87.387 333 27 3 5134 5462 479585112 479584791 8.640000e-98 368.0
28 TraesCS7A01G206900 chr1D 87.097 93 9 3 4983 5072 308419646 308419738 9.680000e-18 102.0
29 TraesCS7A01G206900 chr2A 91.880 234 11 4 599 825 133980159 133980391 2.450000e-83 320.0
30 TraesCS7A01G206900 chr2A 89.796 49 4 1 785 833 136637789 136637836 1.640000e-05 62.1
31 TraesCS7A01G206900 chr3A 85.915 213 19 1 5125 5337 217987629 217987830 3.310000e-52 217.0
32 TraesCS7A01G206900 chr4A 92.941 85 2 4 4990 5072 616504386 616504304 2.670000e-23 121.0
33 TraesCS7A01G206900 chr4A 90.476 84 6 2 4991 5072 644003387 644003304 5.780000e-20 110.0
34 TraesCS7A01G206900 chr2D 91.463 82 7 0 4991 5072 81000049 80999968 4.470000e-21 113.0
35 TraesCS7A01G206900 chr2D 100.000 36 0 0 785 820 67200363 67200398 3.530000e-07 67.6
36 TraesCS7A01G206900 chr5D 94.366 71 4 0 5002 5072 8408122 8408052 5.780000e-20 110.0
37 TraesCS7A01G206900 chr1A 89.474 57 3 2 785 840 537148042 537147988 9.820000e-08 69.4
38 TraesCS7A01G206900 chr2B 97.436 39 1 0 785 823 358908163 358908125 3.530000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G206900 chr7A 169308747 169314208 5461 True 10087.000000 10087 100.0000 1 5462 1 chr7A.!!$R1 5461
1 TraesCS7A01G206900 chr7A 511037650 511038482 832 True 1349.000000 1349 96.0430 1 826 1 chr7A.!!$R2 825
2 TraesCS7A01G206900 chr7B 132133593 132138478 4885 True 2104.733333 5387 94.2810 820 5124 3 chr7B.!!$R3 4304
3 TraesCS7A01G206900 chr7B 678026813 678027632 819 False 1194.000000 1194 92.9950 1 820 1 chr7B.!!$F2 819
4 TraesCS7A01G206900 chr7D 167564172 167568372 4200 True 1243.740000 3061 93.6042 820 5123 5 chr7D.!!$R1 4303
5 TraesCS7A01G206900 chr6A 134937468 134938293 825 False 1260.000000 1260 94.3310 1 820 1 chr6A.!!$F1 819
6 TraesCS7A01G206900 chr3B 388147645 388148499 854 False 506.500000 582 90.4465 4 820 2 chr3B.!!$F2 816

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
444 489 0.245266 TGAATTCGGCAGTAGCGTCA 59.755 50.000 0.04 0.0 43.41 4.35 F
619 664 0.527600 GATGATACGTGCGTGCCTGA 60.528 55.000 7.55 0.0 0.00 3.86 F
1266 1337 0.671251 CGACCTCAGGCTCAGGTATC 59.329 60.000 11.16 0.0 44.87 2.24 F
2901 3631 1.067565 TCGTGTCTCAAGATGGTCTGC 60.068 52.381 0.00 0.0 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2346 3073 2.037251 ACTAGCAGAAGAAGCCAAACGA 59.963 45.455 0.00 0.00 0.00 3.85 R
2347 3074 2.417719 ACTAGCAGAAGAAGCCAAACG 58.582 47.619 0.00 0.00 0.00 3.60 R
3037 3768 0.249238 CTCTCCAGTAGCATGCGGAC 60.249 60.000 13.01 14.54 0.00 4.79 R
4562 5304 1.307097 GCATCTGAATCCTGACTGGC 58.693 55.000 0.00 0.00 35.26 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
171 172 5.886609 TCAAGGTAACAATTGAAGATGGGA 58.113 37.500 13.59 0.00 41.41 4.37
172 173 6.310941 TCAAGGTAACAATTGAAGATGGGAA 58.689 36.000 13.59 0.00 41.41 3.97
372 417 4.399395 CAGGAGAGGCTGGCGCAA 62.399 66.667 10.83 0.00 38.10 4.85
444 489 0.245266 TGAATTCGGCAGTAGCGTCA 59.755 50.000 0.04 0.00 43.41 4.35
549 594 3.956199 ACGGGAGAGAAATATAACGTGGA 59.044 43.478 0.00 0.00 31.60 4.02
619 664 0.527600 GATGATACGTGCGTGCCTGA 60.528 55.000 7.55 0.00 0.00 3.86
747 801 5.465532 TTTTTGACATGGCTGATTTGCTA 57.534 34.783 0.00 0.00 0.00 3.49
804 865 7.461749 CATGTAATAGGTTAGTGGGGATGAAT 58.538 38.462 0.00 0.00 0.00 2.57
846 907 8.964476 ATAACCTAGATTTACAACACATCTGG 57.036 34.615 0.00 0.00 0.00 3.86
877 938 5.619220 GATCCAGATCTTGAGGCACTTATT 58.381 41.667 2.62 0.00 34.82 1.40
906 977 2.452047 ACCCCTCGTATATAGGAACCCA 59.548 50.000 6.59 0.00 36.08 4.51
928 999 1.243902 AAACGAGTACCGAACCCGTA 58.756 50.000 10.17 0.00 41.76 4.02
1266 1337 0.671251 CGACCTCAGGCTCAGGTATC 59.329 60.000 11.16 0.00 44.87 2.24
1384 1487 8.235905 GGTATAGTATAAGGAGCTAGTTCAACG 58.764 40.741 8.96 0.00 0.00 4.10
1409 2130 9.983804 CGAATTAGTTAGTGGAAGTAATTTTCC 57.016 33.333 10.09 2.41 46.66 3.13
1410 2131 9.983804 GAATTAGTTAGTGGAAGTAATTTTCCG 57.016 33.333 10.09 0.00 46.66 4.30
1619 2345 6.699895 TCGTGCACTATTAGTTTTGTACTG 57.300 37.500 16.19 0.00 37.73 2.74
1622 2348 8.245491 TCGTGCACTATTAGTTTTGTACTGATA 58.755 33.333 16.19 0.00 37.73 2.15
1793 2519 2.254152 TTAGGCACTGGGACTCTGAT 57.746 50.000 0.00 0.00 41.52 2.90
1827 2553 1.202976 AGGCAAGAACTCAACCTGCAT 60.203 47.619 0.00 0.00 0.00 3.96
1867 2593 5.449107 TCCACTGTACTCTGTAACACTTC 57.551 43.478 0.00 0.00 0.00 3.01
1926 2652 3.909776 TGCTGCAGAAATGAAGAACAG 57.090 42.857 20.43 0.00 0.00 3.16
1959 2685 7.710907 TGAATGTAGCTTTAAGGTATAGCACTG 59.289 37.037 7.16 0.00 35.55 3.66
2081 2807 4.819105 TTGGAAGTCAGAACGGTATGAT 57.181 40.909 0.00 0.00 0.00 2.45
2091 2817 6.924060 GTCAGAACGGTATGATTAATGCTACT 59.076 38.462 0.00 0.00 0.00 2.57
2099 2825 7.309499 CGGTATGATTAATGCTACTCCTTCTCT 60.309 40.741 0.00 0.00 0.00 3.10
2124 2850 9.294030 CTGCTTGTTATCTTTATTGATTGGAAC 57.706 33.333 0.00 0.00 0.00 3.62
2145 2871 5.726980 ACAAAGCAGCAATTTCATCCTTA 57.273 34.783 0.00 0.00 0.00 2.69
2372 3099 4.826274 TGGCTTCTTCTGCTAGTAATGT 57.174 40.909 0.00 0.00 0.00 2.71
2373 3100 5.165961 TGGCTTCTTCTGCTAGTAATGTT 57.834 39.130 0.00 0.00 0.00 2.71
2395 3122 3.825908 TTCCCTATTTGATATGGGCCC 57.174 47.619 17.59 17.59 39.49 5.80
2433 3160 5.962031 TGGGTAGAACTAGCAGGAAATAGAA 59.038 40.000 12.06 0.00 35.41 2.10
2677 3405 5.955959 TCAGGTCTCTGCTAAGTAACCAATA 59.044 40.000 0.00 0.00 40.69 1.90
2693 3421 9.030452 AGTAACCAATATTTTATTGTTGGCAGA 57.970 29.630 3.08 0.00 43.79 4.26
2773 3503 7.179516 ACCCAAAAATTTGTACTCGGGAATATT 59.820 33.333 8.21 0.00 36.45 1.28
2856 3586 8.538409 AGTTAAAATCAGCATCATTTGTTTCC 57.462 30.769 0.00 0.00 0.00 3.13
2879 3609 6.868339 TCCTGCGTATCTAATATCATTGTGTG 59.132 38.462 0.00 0.00 0.00 3.82
2883 3613 6.183359 GCGTATCTAATATCATTGTGTGGTCG 60.183 42.308 0.00 0.00 0.00 4.79
2901 3631 1.067565 TCGTGTCTCAAGATGGTCTGC 60.068 52.381 0.00 0.00 0.00 4.26
2902 3632 1.337167 CGTGTCTCAAGATGGTCTGCA 60.337 52.381 0.00 0.00 0.00 4.41
2915 3645 6.709281 AGATGGTCTGCATAATCCTCATTAG 58.291 40.000 0.00 0.00 0.00 1.73
2950 3680 7.503521 TGTAATGCACAGTTTGAAATGACTA 57.496 32.000 0.00 0.00 31.89 2.59
2955 3685 6.437928 TGCACAGTTTGAAATGACTATTGAC 58.562 36.000 0.00 0.00 0.00 3.18
2961 3691 8.783093 CAGTTTGAAATGACTATTGACCACTTA 58.217 33.333 0.00 0.00 0.00 2.24
2973 3703 3.988819 TGACCACTTAAAATTTGGCAGC 58.011 40.909 0.00 0.00 33.25 5.25
3007 3737 5.304357 ACTCCTTCCAACTTTACCCAAATTG 59.696 40.000 0.00 0.00 0.00 2.32
3025 3755 6.868339 CCAAATTGTTGTTTACTCCTGATTCC 59.132 38.462 0.00 0.00 32.40 3.01
3031 3762 4.175962 TGTTTACTCCTGATTCCCCTTCT 58.824 43.478 0.00 0.00 0.00 2.85
3037 3768 1.213926 CCTGATTCCCCTTCTTCCAGG 59.786 57.143 0.00 0.00 34.52 4.45
3060 3791 1.976132 GCATGCTACTGGAGAGGGCA 61.976 60.000 11.37 0.00 36.79 5.36
3099 3830 7.508977 GGAAAATGGGATGGAATTCCTATTGTA 59.491 37.037 24.73 4.16 44.92 2.41
3133 3864 6.714810 TGATTTTAACAGCACACCTGAAGTAT 59.285 34.615 0.00 0.00 44.64 2.12
3227 3958 2.996621 GGTTTCTGGAACTGAGATGACG 59.003 50.000 0.00 0.00 37.65 4.35
3229 3960 4.058817 GTTTCTGGAACTGAGATGACGTT 58.941 43.478 0.00 0.00 37.65 3.99
3234 3965 5.010719 TCTGGAACTGAGATGACGTTTTACT 59.989 40.000 0.00 0.00 0.00 2.24
3455 4186 4.730042 CGACAATGAAGGTGAAATATTGCG 59.270 41.667 0.00 0.00 33.28 4.85
3531 4266 8.867112 AGAATTGATTGACAATGCATACAATC 57.133 30.769 27.93 27.93 46.90 2.67
3632 4367 7.681939 TTGGTTTGTATTGTAGGTCAGAATC 57.318 36.000 0.00 0.00 0.00 2.52
3633 4368 7.016153 TGGTTTGTATTGTAGGTCAGAATCT 57.984 36.000 0.00 0.00 0.00 2.40
3672 4407 4.327680 AGTTGACCTAGCACATTTCTTCC 58.672 43.478 0.00 0.00 0.00 3.46
3681 4416 7.890655 ACCTAGCACATTTCTTCCTTTTAAGAT 59.109 33.333 0.00 0.00 35.48 2.40
3714 4449 7.607615 ACCTTCCTTGTAGTTTACTGAACTA 57.392 36.000 0.00 0.00 46.61 2.24
3775 4510 2.279741 TCAAATGTCATGGTCGCTAGC 58.720 47.619 4.06 4.06 0.00 3.42
3853 4589 4.156455 TGGAAAGTGAAGCACTCTCTTT 57.844 40.909 12.84 12.84 44.62 2.52
3884 4620 8.771920 TTCGACATATAGTTGAAATGAAGTGT 57.228 30.769 0.00 0.00 45.47 3.55
3919 4655 3.288092 GGAAATTCGAGCAATAGGGGTT 58.712 45.455 0.00 0.00 0.00 4.11
3956 4692 5.961272 TCTAGCAACGTCATATCACAAGAA 58.039 37.500 0.00 0.00 0.00 2.52
3987 4723 6.489603 TGGGACTGTTGATTATTTGTGGTAT 58.510 36.000 0.00 0.00 0.00 2.73
4001 4737 5.756195 TTGTGGTATGCTTCTAATCATGC 57.244 39.130 0.00 0.00 0.00 4.06
4004 4740 5.071653 TGTGGTATGCTTCTAATCATGCCTA 59.928 40.000 12.72 2.78 43.18 3.93
4038 4774 3.076621 CACATGTACAATGTGGCTGAGT 58.923 45.455 21.21 0.00 44.04 3.41
4091 4827 1.239347 GCTCCAGAGTTTTGGACACC 58.761 55.000 0.00 0.00 42.24 4.16
4162 4898 9.694137 GGTACTTCCTCATTTAGTACATCATAC 57.306 37.037 12.15 0.00 43.72 2.39
4219 4958 4.037089 GGTTTAAACTTTGGGTCGTGTCAT 59.963 41.667 17.50 0.00 0.00 3.06
4291 5030 3.664107 ACTGCTAACAACGATGTCATGT 58.336 40.909 0.00 0.00 39.40 3.21
4547 5289 2.625737 GCACAGCACATCAGAGTATGT 58.374 47.619 0.00 0.00 40.75 2.29
4633 5375 2.747446 GTCATATCCTTGCCAAACACGT 59.253 45.455 0.00 0.00 0.00 4.49
4820 5595 5.616270 TGTCAGTTTAGCATTTGGTACTCA 58.384 37.500 0.00 0.00 0.00 3.41
4859 5634 5.911280 CCTATTTTGCGCAGAATATTGACAG 59.089 40.000 27.52 18.66 0.00 3.51
4866 5641 4.309933 CGCAGAATATTGACAGGCTATCA 58.690 43.478 0.00 0.00 0.00 2.15
4885 5662 7.017645 GCTATCATTATGATTTAACGTGCAGG 58.982 38.462 13.25 4.53 38.26 4.85
4904 5681 2.823747 AGGCTGTACATGACGACTGTAA 59.176 45.455 0.00 0.00 31.27 2.41
4937 5751 7.576287 CGTTCTGTCTATACCCTGTGTTTAGAA 60.576 40.741 0.00 0.00 38.64 2.10
5017 5835 8.697292 ACTCCTTCTAAAGAAATATAAGAGCGT 58.303 33.333 0.00 0.00 33.07 5.07
5018 5836 9.535878 CTCCTTCTAAAGAAATATAAGAGCGTT 57.464 33.333 0.00 0.00 33.07 4.84
5019 5837 9.886132 TCCTTCTAAAGAAATATAAGAGCGTTT 57.114 29.630 0.00 0.00 33.07 3.60
5036 5854 9.654663 AAGAGCGTTTAGATCATTACTTTAGTT 57.345 29.630 0.00 0.00 37.82 2.24
5058 5876 8.773404 AGTTATCTAAACGCTCTTACATTTGT 57.227 30.769 0.00 0.00 0.00 2.83
5059 5877 9.216117 AGTTATCTAAACGCTCTTACATTTGTT 57.784 29.630 0.00 0.00 0.00 2.83
5060 5878 9.821662 GTTATCTAAACGCTCTTACATTTGTTT 57.178 29.630 0.00 0.00 34.32 2.83
5063 5881 9.988350 ATCTAAACGCTCTTACATTTGTTTATG 57.012 29.630 0.00 0.00 33.05 1.90
5064 5882 8.447833 TCTAAACGCTCTTACATTTGTTTATGG 58.552 33.333 0.00 0.00 33.05 2.74
5065 5883 6.811253 AACGCTCTTACATTTGTTTATGGA 57.189 33.333 0.00 0.00 0.00 3.41
5066 5884 6.422776 ACGCTCTTACATTTGTTTATGGAG 57.577 37.500 0.00 0.00 0.00 3.86
5067 5885 5.354234 ACGCTCTTACATTTGTTTATGGAGG 59.646 40.000 0.00 0.00 0.00 4.30
5068 5886 5.220854 CGCTCTTACATTTGTTTATGGAGGG 60.221 44.000 0.00 0.00 0.00 4.30
5069 5887 5.885912 GCTCTTACATTTGTTTATGGAGGGA 59.114 40.000 0.00 0.00 0.00 4.20
5070 5888 6.038714 GCTCTTACATTTGTTTATGGAGGGAG 59.961 42.308 0.00 0.00 0.00 4.30
5124 5944 2.107546 GTTGTGTCCGTCGGTGGT 59.892 61.111 11.88 0.00 0.00 4.16
5125 5945 1.522130 GTTGTGTCCGTCGGTGGTT 60.522 57.895 11.88 0.00 0.00 3.67
5126 5946 1.227321 TTGTGTCCGTCGGTGGTTC 60.227 57.895 11.88 0.00 0.00 3.62
5127 5947 2.732094 GTGTCCGTCGGTGGTTCG 60.732 66.667 11.88 0.00 0.00 3.95
5128 5948 4.651008 TGTCCGTCGGTGGTTCGC 62.651 66.667 11.88 0.00 0.00 4.70
5144 5964 3.590824 GCCTGGCGTGCTTTACAT 58.409 55.556 1.35 0.00 0.00 2.29
5145 5965 1.137404 GCCTGGCGTGCTTTACATG 59.863 57.895 1.35 0.00 38.41 3.21
5146 5966 1.802636 CCTGGCGTGCTTTACATGG 59.197 57.895 0.00 0.00 35.67 3.66
5147 5967 0.960364 CCTGGCGTGCTTTACATGGT 60.960 55.000 0.00 0.00 35.67 3.55
5148 5968 1.677518 CCTGGCGTGCTTTACATGGTA 60.678 52.381 0.00 0.00 35.67 3.25
5149 5969 2.288666 CTGGCGTGCTTTACATGGTAT 58.711 47.619 0.00 0.00 35.67 2.73
5150 5970 2.682856 CTGGCGTGCTTTACATGGTATT 59.317 45.455 0.00 0.00 35.67 1.89
5151 5971 2.421775 TGGCGTGCTTTACATGGTATTG 59.578 45.455 0.00 0.00 35.67 1.90
5152 5972 2.422127 GGCGTGCTTTACATGGTATTGT 59.578 45.455 0.00 0.00 35.67 2.71
5153 5973 3.486875 GGCGTGCTTTACATGGTATTGTC 60.487 47.826 0.00 0.00 35.67 3.18
5154 5974 3.486875 GCGTGCTTTACATGGTATTGTCC 60.487 47.826 0.00 0.00 35.67 4.02
5155 5975 3.064820 CGTGCTTTACATGGTATTGTCCC 59.935 47.826 0.00 0.00 0.00 4.46
5156 5976 4.013728 GTGCTTTACATGGTATTGTCCCA 58.986 43.478 0.00 0.00 36.16 4.37
5157 5977 4.096382 GTGCTTTACATGGTATTGTCCCAG 59.904 45.833 0.00 0.00 34.92 4.45
5158 5978 3.632145 GCTTTACATGGTATTGTCCCAGG 59.368 47.826 0.00 0.00 39.60 4.45
5159 5979 3.943671 TTACATGGTATTGTCCCAGGG 57.056 47.619 0.00 0.00 38.06 4.45
5160 5980 1.979809 ACATGGTATTGTCCCAGGGA 58.020 50.000 3.01 3.01 38.06 4.20
5161 5981 2.502745 ACATGGTATTGTCCCAGGGAT 58.497 47.619 12.84 0.00 38.06 3.85
5162 5982 2.175499 ACATGGTATTGTCCCAGGGATG 59.825 50.000 12.84 5.63 38.06 3.51
5163 5983 1.979809 TGGTATTGTCCCAGGGATGT 58.020 50.000 12.84 3.35 32.73 3.06
5164 5984 1.843851 TGGTATTGTCCCAGGGATGTC 59.156 52.381 12.84 0.00 32.73 3.06
5165 5985 1.202651 GGTATTGTCCCAGGGATGTCG 60.203 57.143 12.84 0.00 32.73 4.35
5166 5986 1.760613 GTATTGTCCCAGGGATGTCGA 59.239 52.381 12.84 0.00 32.73 4.20
5167 5987 1.511613 ATTGTCCCAGGGATGTCGAT 58.488 50.000 12.84 1.03 32.73 3.59
5168 5988 0.830648 TTGTCCCAGGGATGTCGATC 59.169 55.000 12.84 0.00 32.73 3.69
5169 5989 0.032117 TGTCCCAGGGATGTCGATCT 60.032 55.000 12.84 0.00 32.73 2.75
5170 5990 1.123928 GTCCCAGGGATGTCGATCTT 58.876 55.000 12.84 0.00 32.73 2.40
5171 5991 1.123077 TCCCAGGGATGTCGATCTTG 58.877 55.000 3.01 0.00 0.00 3.02
5172 5992 0.107456 CCCAGGGATGTCGATCTTGG 59.893 60.000 0.00 0.00 35.11 3.61
5173 5993 0.533755 CCAGGGATGTCGATCTTGGC 60.534 60.000 0.00 0.00 31.20 4.52
5174 5994 0.178767 CAGGGATGTCGATCTTGGCA 59.821 55.000 0.00 0.00 0.00 4.92
5175 5995 0.911769 AGGGATGTCGATCTTGGCAA 59.088 50.000 0.00 0.00 0.00 4.52
5176 5996 1.281867 AGGGATGTCGATCTTGGCAAA 59.718 47.619 0.00 0.00 0.00 3.68
5177 5997 1.401905 GGGATGTCGATCTTGGCAAAC 59.598 52.381 0.00 0.00 0.00 2.93
5178 5998 2.083774 GGATGTCGATCTTGGCAAACA 58.916 47.619 0.00 2.46 0.00 2.83
5179 5999 2.096496 GGATGTCGATCTTGGCAAACAG 59.904 50.000 0.00 0.00 0.00 3.16
5180 6000 2.542020 TGTCGATCTTGGCAAACAGA 57.458 45.000 0.00 0.00 0.00 3.41
5181 6001 2.143122 TGTCGATCTTGGCAAACAGAC 58.857 47.619 0.00 9.24 0.00 3.51
5182 6002 2.143122 GTCGATCTTGGCAAACAGACA 58.857 47.619 15.25 0.00 0.00 3.41
5183 6003 2.096218 GTCGATCTTGGCAAACAGACAC 60.096 50.000 15.25 3.19 32.34 3.67
5184 6004 1.872952 CGATCTTGGCAAACAGACACA 59.127 47.619 0.00 0.00 32.34 3.72
5185 6005 2.485426 CGATCTTGGCAAACAGACACAT 59.515 45.455 0.00 0.00 32.34 3.21
5186 6006 3.425359 CGATCTTGGCAAACAGACACATC 60.425 47.826 0.00 0.00 32.34 3.06
5187 6007 2.929641 TCTTGGCAAACAGACACATCA 58.070 42.857 0.00 0.00 32.34 3.07
5188 6008 3.286353 TCTTGGCAAACAGACACATCAA 58.714 40.909 0.00 0.00 32.34 2.57
5189 6009 3.316029 TCTTGGCAAACAGACACATCAAG 59.684 43.478 0.00 0.00 32.34 3.02
5190 6010 1.955778 TGGCAAACAGACACATCAAGG 59.044 47.619 0.00 0.00 0.00 3.61
5191 6011 1.956477 GGCAAACAGACACATCAAGGT 59.044 47.619 0.00 0.00 0.00 3.50
5192 6012 3.146066 GGCAAACAGACACATCAAGGTA 58.854 45.455 0.00 0.00 0.00 3.08
5193 6013 3.058224 GGCAAACAGACACATCAAGGTAC 60.058 47.826 0.00 0.00 0.00 3.34
5194 6014 3.563808 GCAAACAGACACATCAAGGTACA 59.436 43.478 0.00 0.00 0.00 2.90
5195 6015 4.319766 GCAAACAGACACATCAAGGTACAG 60.320 45.833 0.00 0.00 0.00 2.74
5196 6016 3.045601 ACAGACACATCAAGGTACAGC 57.954 47.619 0.00 0.00 0.00 4.40
5197 6017 2.289694 ACAGACACATCAAGGTACAGCC 60.290 50.000 0.00 0.00 37.58 4.85
5206 6026 1.609783 AGGTACAGCCTCAATGCCC 59.390 57.895 0.00 0.00 46.96 5.36
5207 6027 1.207488 AGGTACAGCCTCAATGCCCA 61.207 55.000 0.00 0.00 46.96 5.36
5208 6028 0.749454 GGTACAGCCTCAATGCCCAG 60.749 60.000 0.00 0.00 0.00 4.45
5209 6029 0.035056 GTACAGCCTCAATGCCCAGT 60.035 55.000 0.00 0.00 0.00 4.00
5210 6030 1.209504 GTACAGCCTCAATGCCCAGTA 59.790 52.381 0.00 0.00 0.00 2.74
5211 6031 0.921896 ACAGCCTCAATGCCCAGTAT 59.078 50.000 0.00 0.00 0.00 2.12
5212 6032 1.315690 CAGCCTCAATGCCCAGTATG 58.684 55.000 0.00 0.00 0.00 2.39
5213 6033 0.466922 AGCCTCAATGCCCAGTATGC 60.467 55.000 0.00 0.00 31.97 3.14
5214 6034 0.752743 GCCTCAATGCCCAGTATGCA 60.753 55.000 0.00 0.00 43.97 3.96
5215 6035 1.766494 CCTCAATGCCCAGTATGCAA 58.234 50.000 0.00 0.00 42.92 4.08
5216 6036 1.679680 CCTCAATGCCCAGTATGCAAG 59.320 52.381 0.00 0.00 42.92 4.01
5217 6037 1.066605 CTCAATGCCCAGTATGCAAGC 59.933 52.381 0.00 0.00 42.92 4.01
5218 6038 0.818938 CAATGCCCAGTATGCAAGCA 59.181 50.000 0.00 0.00 42.92 3.91
5219 6039 1.205179 CAATGCCCAGTATGCAAGCAA 59.795 47.619 0.00 0.00 42.92 3.91
5220 6040 1.108776 ATGCCCAGTATGCAAGCAAG 58.891 50.000 0.00 0.00 42.92 4.01
5221 6041 0.966875 TGCCCAGTATGCAAGCAAGG 60.967 55.000 0.00 0.00 35.40 3.61
5222 6042 1.669999 GCCCAGTATGCAAGCAAGGG 61.670 60.000 16.16 16.16 37.87 3.95
5223 6043 1.039233 CCCAGTATGCAAGCAAGGGG 61.039 60.000 13.91 11.34 31.97 4.79
5224 6044 1.669999 CCAGTATGCAAGCAAGGGGC 61.670 60.000 0.00 0.00 37.58 5.80
5233 6053 3.698820 GCAAGGGGCAAGCAAGGG 61.699 66.667 0.00 0.00 43.97 3.95
5234 6054 2.999063 CAAGGGGCAAGCAAGGGG 60.999 66.667 0.00 0.00 0.00 4.79
5245 6065 2.633860 GCAAGGGGCGGAAGATATG 58.366 57.895 0.00 0.00 0.00 1.78
5246 6066 1.518903 GCAAGGGGCGGAAGATATGC 61.519 60.000 0.00 0.00 0.00 3.14
5247 6067 1.071471 AAGGGGCGGAAGATATGCG 59.929 57.895 0.00 0.00 46.83 4.73
5259 6079 4.993584 GGAAGATATGCGACATCTGATGTT 59.006 41.667 23.03 10.77 45.03 2.71
5260 6080 5.468072 GGAAGATATGCGACATCTGATGTTT 59.532 40.000 23.03 11.47 45.03 2.83
5261 6081 6.646653 GGAAGATATGCGACATCTGATGTTTA 59.353 38.462 23.03 13.27 45.03 2.01
5262 6082 7.359598 GGAAGATATGCGACATCTGATGTTTAC 60.360 40.741 23.03 15.65 45.03 2.01
5263 6083 6.515832 AGATATGCGACATCTGATGTTTACA 58.484 36.000 23.03 19.91 45.03 2.41
5264 6084 7.157347 AGATATGCGACATCTGATGTTTACAT 58.843 34.615 23.03 23.93 45.03 2.29
5265 6085 4.863152 TGCGACATCTGATGTTTACATG 57.137 40.909 23.03 10.88 45.03 3.21
5266 6086 4.252878 TGCGACATCTGATGTTTACATGT 58.747 39.130 23.03 2.69 45.03 3.21
5267 6087 4.093261 TGCGACATCTGATGTTTACATGTG 59.907 41.667 23.03 8.26 45.03 3.21
5268 6088 4.329801 GCGACATCTGATGTTTACATGTGA 59.670 41.667 23.03 0.00 45.03 3.58
5269 6089 5.163864 GCGACATCTGATGTTTACATGTGAA 60.164 40.000 23.03 3.21 45.03 3.18
5270 6090 6.620518 GCGACATCTGATGTTTACATGTGAAA 60.621 38.462 23.03 2.67 45.03 2.69
5271 6091 6.957635 CGACATCTGATGTTTACATGTGAAAG 59.042 38.462 23.03 0.95 45.03 2.62
5272 6092 7.148590 CGACATCTGATGTTTACATGTGAAAGA 60.149 37.037 23.03 6.77 45.03 2.52
5273 6093 8.037382 ACATCTGATGTTTACATGTGAAAGAG 57.963 34.615 17.24 1.26 41.63 2.85
5274 6094 6.486253 TCTGATGTTTACATGTGAAAGAGC 57.514 37.500 9.11 7.30 36.57 4.09
5275 6095 5.997129 TCTGATGTTTACATGTGAAAGAGCA 59.003 36.000 9.11 11.08 36.57 4.26
5276 6096 6.486320 TCTGATGTTTACATGTGAAAGAGCAA 59.514 34.615 9.11 2.63 36.57 3.91
5277 6097 7.013178 TCTGATGTTTACATGTGAAAGAGCAAA 59.987 33.333 9.11 0.00 36.57 3.68
5278 6098 7.487484 TGATGTTTACATGTGAAAGAGCAAAA 58.513 30.769 9.11 0.00 36.57 2.44
5279 6099 7.648908 TGATGTTTACATGTGAAAGAGCAAAAG 59.351 33.333 9.11 0.00 36.57 2.27
5280 6100 7.094508 TGTTTACATGTGAAAGAGCAAAAGA 57.905 32.000 9.11 0.00 0.00 2.52
5281 6101 7.542890 TGTTTACATGTGAAAGAGCAAAAGAA 58.457 30.769 9.11 0.00 0.00 2.52
5282 6102 7.701924 TGTTTACATGTGAAAGAGCAAAAGAAG 59.298 33.333 9.11 0.00 0.00 2.85
5283 6103 5.841957 ACATGTGAAAGAGCAAAAGAAGT 57.158 34.783 0.00 0.00 0.00 3.01
5284 6104 6.942532 ACATGTGAAAGAGCAAAAGAAGTA 57.057 33.333 0.00 0.00 0.00 2.24
5285 6105 7.516198 ACATGTGAAAGAGCAAAAGAAGTAT 57.484 32.000 0.00 0.00 0.00 2.12
5286 6106 7.365741 ACATGTGAAAGAGCAAAAGAAGTATG 58.634 34.615 0.00 0.00 0.00 2.39
5287 6107 6.317789 TGTGAAAGAGCAAAAGAAGTATGG 57.682 37.500 0.00 0.00 0.00 2.74
5288 6108 6.061441 TGTGAAAGAGCAAAAGAAGTATGGA 58.939 36.000 0.00 0.00 0.00 3.41
5289 6109 6.545666 TGTGAAAGAGCAAAAGAAGTATGGAA 59.454 34.615 0.00 0.00 0.00 3.53
5290 6110 7.080724 GTGAAAGAGCAAAAGAAGTATGGAAG 58.919 38.462 0.00 0.00 0.00 3.46
5291 6111 6.998074 TGAAAGAGCAAAAGAAGTATGGAAGA 59.002 34.615 0.00 0.00 0.00 2.87
5292 6112 7.502226 TGAAAGAGCAAAAGAAGTATGGAAGAA 59.498 33.333 0.00 0.00 0.00 2.52
5293 6113 7.823745 AAGAGCAAAAGAAGTATGGAAGAAA 57.176 32.000 0.00 0.00 0.00 2.52
5294 6114 7.208225 AGAGCAAAAGAAGTATGGAAGAAAC 57.792 36.000 0.00 0.00 0.00 2.78
5295 6115 7.001073 AGAGCAAAAGAAGTATGGAAGAAACT 58.999 34.615 0.00 0.00 0.00 2.66
5296 6116 6.974965 AGCAAAAGAAGTATGGAAGAAACTG 58.025 36.000 0.00 0.00 0.00 3.16
5297 6117 6.015940 AGCAAAAGAAGTATGGAAGAAACTGG 60.016 38.462 0.00 0.00 0.00 4.00
5298 6118 6.681777 CAAAAGAAGTATGGAAGAAACTGGG 58.318 40.000 0.00 0.00 0.00 4.45
5299 6119 4.576330 AGAAGTATGGAAGAAACTGGGG 57.424 45.455 0.00 0.00 0.00 4.96
5300 6120 3.916989 AGAAGTATGGAAGAAACTGGGGT 59.083 43.478 0.00 0.00 0.00 4.95
5301 6121 4.354087 AGAAGTATGGAAGAAACTGGGGTT 59.646 41.667 0.00 0.00 37.24 4.11
5302 6122 5.550403 AGAAGTATGGAAGAAACTGGGGTTA 59.450 40.000 0.00 0.00 34.90 2.85
5303 6123 5.175388 AGTATGGAAGAAACTGGGGTTAC 57.825 43.478 0.00 0.00 34.90 2.50
5304 6124 4.600111 AGTATGGAAGAAACTGGGGTTACA 59.400 41.667 0.00 0.00 34.90 2.41
5305 6125 4.675063 ATGGAAGAAACTGGGGTTACAT 57.325 40.909 0.00 0.00 34.90 2.29
5306 6126 3.761897 TGGAAGAAACTGGGGTTACATG 58.238 45.455 0.00 0.00 34.90 3.21
5307 6127 3.396276 TGGAAGAAACTGGGGTTACATGA 59.604 43.478 0.00 0.00 34.90 3.07
5308 6128 4.141135 TGGAAGAAACTGGGGTTACATGAA 60.141 41.667 0.00 0.00 34.90 2.57
5309 6129 4.830600 GGAAGAAACTGGGGTTACATGAAA 59.169 41.667 0.00 0.00 34.90 2.69
5310 6130 5.480422 GGAAGAAACTGGGGTTACATGAAAT 59.520 40.000 0.00 0.00 34.90 2.17
5311 6131 6.661805 GGAAGAAACTGGGGTTACATGAAATA 59.338 38.462 0.00 0.00 34.90 1.40
5312 6132 7.177744 GGAAGAAACTGGGGTTACATGAAATAA 59.822 37.037 0.00 0.00 34.90 1.40
5313 6133 8.664669 AAGAAACTGGGGTTACATGAAATAAT 57.335 30.769 0.00 0.00 34.90 1.28
5314 6134 9.762381 AAGAAACTGGGGTTACATGAAATAATA 57.238 29.630 0.00 0.00 34.90 0.98
5315 6135 9.408648 AGAAACTGGGGTTACATGAAATAATAG 57.591 33.333 0.00 0.00 34.90 1.73
5316 6136 8.533569 AAACTGGGGTTACATGAAATAATAGG 57.466 34.615 0.00 0.00 34.90 2.57
5317 6137 7.220890 ACTGGGGTTACATGAAATAATAGGT 57.779 36.000 0.00 0.00 0.00 3.08
5318 6138 7.060421 ACTGGGGTTACATGAAATAATAGGTG 58.940 38.462 0.00 0.00 0.00 4.00
5319 6139 7.092174 ACTGGGGTTACATGAAATAATAGGTGA 60.092 37.037 0.00 0.00 0.00 4.02
5320 6140 7.644062 TGGGGTTACATGAAATAATAGGTGAA 58.356 34.615 0.00 0.00 0.00 3.18
5321 6141 7.777910 TGGGGTTACATGAAATAATAGGTGAAG 59.222 37.037 0.00 0.00 0.00 3.02
5322 6142 7.778382 GGGGTTACATGAAATAATAGGTGAAGT 59.222 37.037 0.00 0.00 0.00 3.01
5323 6143 8.837389 GGGTTACATGAAATAATAGGTGAAGTC 58.163 37.037 0.00 0.00 0.00 3.01
5324 6144 9.391006 GGTTACATGAAATAATAGGTGAAGTCA 57.609 33.333 0.00 0.00 0.00 3.41
5338 6158 7.219484 AGGTGAAGTCATTTAAATTGACAGG 57.781 36.000 21.94 4.75 35.23 4.00
5339 6159 6.777580 AGGTGAAGTCATTTAAATTGACAGGT 59.222 34.615 21.94 12.81 35.23 4.00
5340 6160 7.040409 AGGTGAAGTCATTTAAATTGACAGGTC 60.040 37.037 21.94 17.65 35.23 3.85
5341 6161 7.255451 GGTGAAGTCATTTAAATTGACAGGTCA 60.255 37.037 21.94 19.02 37.91 4.02
5342 6162 7.805071 GTGAAGTCATTTAAATTGACAGGTCAG 59.195 37.037 21.94 2.54 41.13 3.51
5343 6163 6.824305 AGTCATTTAAATTGACAGGTCAGG 57.176 37.500 21.94 2.15 41.13 3.86
5344 6164 6.306987 AGTCATTTAAATTGACAGGTCAGGT 58.693 36.000 21.94 0.00 41.13 4.00
5345 6165 7.458397 AGTCATTTAAATTGACAGGTCAGGTA 58.542 34.615 21.94 0.00 41.13 3.08
5346 6166 7.607991 AGTCATTTAAATTGACAGGTCAGGTAG 59.392 37.037 21.94 1.18 41.13 3.18
5347 6167 7.390718 GTCATTTAAATTGACAGGTCAGGTAGT 59.609 37.037 18.14 0.00 41.13 2.73
5348 6168 7.390440 TCATTTAAATTGACAGGTCAGGTAGTG 59.610 37.037 0.00 0.00 41.13 2.74
5349 6169 4.706842 AAATTGACAGGTCAGGTAGTGT 57.293 40.909 2.01 0.00 41.13 3.55
5350 6170 3.685139 ATTGACAGGTCAGGTAGTGTG 57.315 47.619 2.01 0.00 41.13 3.82
5351 6171 2.375014 TGACAGGTCAGGTAGTGTGA 57.625 50.000 0.00 0.00 34.14 3.58
5352 6172 2.889512 TGACAGGTCAGGTAGTGTGAT 58.110 47.619 0.00 0.00 34.14 3.06
5353 6173 2.826128 TGACAGGTCAGGTAGTGTGATC 59.174 50.000 0.00 0.00 34.14 2.92
5354 6174 2.166664 GACAGGTCAGGTAGTGTGATCC 59.833 54.545 0.00 0.00 0.00 3.36
5355 6175 2.225394 ACAGGTCAGGTAGTGTGATCCT 60.225 50.000 0.00 0.00 0.00 3.24
5356 6176 2.834549 CAGGTCAGGTAGTGTGATCCTT 59.165 50.000 0.00 0.00 0.00 3.36
5357 6177 2.834549 AGGTCAGGTAGTGTGATCCTTG 59.165 50.000 0.00 0.00 0.00 3.61
5358 6178 2.832129 GGTCAGGTAGTGTGATCCTTGA 59.168 50.000 0.00 0.00 0.00 3.02
5359 6179 3.260884 GGTCAGGTAGTGTGATCCTTGAA 59.739 47.826 0.00 0.00 0.00 2.69
5360 6180 4.499183 GTCAGGTAGTGTGATCCTTGAAG 58.501 47.826 0.00 0.00 0.00 3.02
5361 6181 4.220821 GTCAGGTAGTGTGATCCTTGAAGA 59.779 45.833 0.00 0.00 0.00 2.87
5362 6182 4.838423 TCAGGTAGTGTGATCCTTGAAGAA 59.162 41.667 0.00 0.00 0.00 2.52
5363 6183 5.485353 TCAGGTAGTGTGATCCTTGAAGAAT 59.515 40.000 0.00 0.00 0.00 2.40
5364 6184 6.013379 TCAGGTAGTGTGATCCTTGAAGAATT 60.013 38.462 0.00 0.00 0.00 2.17
5365 6185 7.180229 TCAGGTAGTGTGATCCTTGAAGAATTA 59.820 37.037 0.00 0.00 0.00 1.40
5366 6186 7.278868 CAGGTAGTGTGATCCTTGAAGAATTAC 59.721 40.741 0.00 0.00 0.00 1.89
5367 6187 7.181125 AGGTAGTGTGATCCTTGAAGAATTACT 59.819 37.037 0.00 0.00 0.00 2.24
5368 6188 8.475639 GGTAGTGTGATCCTTGAAGAATTACTA 58.524 37.037 0.00 0.00 0.00 1.82
5369 6189 9.871238 GTAGTGTGATCCTTGAAGAATTACTAA 57.129 33.333 0.00 0.00 0.00 2.24
5370 6190 8.779354 AGTGTGATCCTTGAAGAATTACTAAC 57.221 34.615 0.00 0.00 0.00 2.34
5371 6191 7.545965 AGTGTGATCCTTGAAGAATTACTAACG 59.454 37.037 0.00 0.00 0.00 3.18
5372 6192 6.312918 TGTGATCCTTGAAGAATTACTAACGC 59.687 38.462 0.00 0.00 0.00 4.84
5373 6193 6.312918 GTGATCCTTGAAGAATTACTAACGCA 59.687 38.462 0.00 0.00 0.00 5.24
5374 6194 6.876789 TGATCCTTGAAGAATTACTAACGCAA 59.123 34.615 0.00 0.00 0.00 4.85
5375 6195 6.476243 TCCTTGAAGAATTACTAACGCAAC 57.524 37.500 0.00 0.00 0.00 4.17
5376 6196 5.410439 TCCTTGAAGAATTACTAACGCAACC 59.590 40.000 0.00 0.00 0.00 3.77
5377 6197 4.914312 TGAAGAATTACTAACGCAACCG 57.086 40.909 0.00 0.00 41.14 4.44
5378 6198 3.680937 TGAAGAATTACTAACGCAACCGG 59.319 43.478 0.00 0.00 39.22 5.28
5379 6199 2.004733 AGAATTACTAACGCAACCGGC 58.995 47.619 0.00 0.00 39.22 6.13
5388 6208 2.785258 GCAACCGGCGAGACATTC 59.215 61.111 9.30 0.00 0.00 2.67
5389 6209 2.032634 GCAACCGGCGAGACATTCA 61.033 57.895 9.30 0.00 0.00 2.57
5390 6210 1.787847 CAACCGGCGAGACATTCAC 59.212 57.895 9.30 0.00 0.00 3.18
5391 6211 1.375523 AACCGGCGAGACATTCACC 60.376 57.895 9.30 0.00 0.00 4.02
5392 6212 1.827399 AACCGGCGAGACATTCACCT 61.827 55.000 9.30 0.00 0.00 4.00
5393 6213 1.811266 CCGGCGAGACATTCACCTG 60.811 63.158 9.30 0.00 0.00 4.00
5394 6214 1.079819 CGGCGAGACATTCACCTGT 60.080 57.895 0.00 0.00 0.00 4.00
5395 6215 0.670546 CGGCGAGACATTCACCTGTT 60.671 55.000 0.00 0.00 0.00 3.16
5396 6216 1.079503 GGCGAGACATTCACCTGTTC 58.920 55.000 0.00 0.00 0.00 3.18
5397 6217 1.338200 GGCGAGACATTCACCTGTTCT 60.338 52.381 0.00 0.00 0.00 3.01
5398 6218 2.417719 GCGAGACATTCACCTGTTCTT 58.582 47.619 0.00 0.00 0.00 2.52
5399 6219 2.158449 GCGAGACATTCACCTGTTCTTG 59.842 50.000 0.00 0.00 0.00 3.02
5400 6220 2.738846 CGAGACATTCACCTGTTCTTGG 59.261 50.000 0.00 0.00 0.00 3.61
5401 6221 3.744660 GAGACATTCACCTGTTCTTGGT 58.255 45.455 0.00 0.00 38.53 3.67
5402 6222 4.560716 CGAGACATTCACCTGTTCTTGGTA 60.561 45.833 0.00 0.00 35.80 3.25
5403 6223 4.899502 AGACATTCACCTGTTCTTGGTAG 58.100 43.478 0.00 0.00 35.80 3.18
5404 6224 4.003648 GACATTCACCTGTTCTTGGTAGG 58.996 47.826 0.00 0.00 35.80 3.18
5405 6225 3.394606 ACATTCACCTGTTCTTGGTAGGT 59.605 43.478 0.00 0.00 45.36 3.08
5406 6226 4.141251 ACATTCACCTGTTCTTGGTAGGTT 60.141 41.667 0.00 0.00 42.72 3.50
5407 6227 3.485463 TCACCTGTTCTTGGTAGGTTG 57.515 47.619 0.00 0.00 42.72 3.77
5408 6228 2.105821 TCACCTGTTCTTGGTAGGTTGG 59.894 50.000 0.00 0.00 42.72 3.77
5409 6229 1.423921 ACCTGTTCTTGGTAGGTTGGG 59.576 52.381 0.00 0.00 41.93 4.12
5410 6230 1.702957 CCTGTTCTTGGTAGGTTGGGA 59.297 52.381 0.00 0.00 0.00 4.37
5411 6231 2.308866 CCTGTTCTTGGTAGGTTGGGAT 59.691 50.000 0.00 0.00 0.00 3.85
5412 6232 3.245264 CCTGTTCTTGGTAGGTTGGGATT 60.245 47.826 0.00 0.00 0.00 3.01
5413 6233 4.010349 CTGTTCTTGGTAGGTTGGGATTC 58.990 47.826 0.00 0.00 0.00 2.52
5414 6234 3.245122 TGTTCTTGGTAGGTTGGGATTCC 60.245 47.826 0.00 0.00 0.00 3.01
5415 6235 1.557832 TCTTGGTAGGTTGGGATTCCG 59.442 52.381 0.00 0.00 35.24 4.30
5416 6236 0.621609 TTGGTAGGTTGGGATTCCGG 59.378 55.000 0.00 0.00 35.24 5.14
5417 6237 1.276140 TGGTAGGTTGGGATTCCGGG 61.276 60.000 0.00 0.00 35.24 5.73
5418 6238 0.984432 GGTAGGTTGGGATTCCGGGA 60.984 60.000 0.00 0.00 35.24 5.14
5419 6239 0.468648 GTAGGTTGGGATTCCGGGAG 59.531 60.000 0.00 0.00 35.24 4.30
5420 6240 0.043637 TAGGTTGGGATTCCGGGAGT 59.956 55.000 0.00 0.00 35.24 3.85
5421 6241 1.223763 GGTTGGGATTCCGGGAGTC 59.776 63.158 10.86 10.86 35.24 3.36
5422 6242 1.272554 GGTTGGGATTCCGGGAGTCT 61.273 60.000 17.73 0.00 35.24 3.24
5423 6243 0.618981 GTTGGGATTCCGGGAGTCTT 59.381 55.000 17.73 0.00 35.24 3.01
5424 6244 1.004394 GTTGGGATTCCGGGAGTCTTT 59.996 52.381 17.73 0.00 35.24 2.52
5425 6245 0.618458 TGGGATTCCGGGAGTCTTTG 59.382 55.000 17.73 0.00 35.24 2.77
5426 6246 0.107165 GGGATTCCGGGAGTCTTTGG 60.107 60.000 17.73 0.00 0.00 3.28
5427 6247 0.618981 GGATTCCGGGAGTCTTTGGT 59.381 55.000 17.73 0.00 0.00 3.67
5428 6248 1.407025 GGATTCCGGGAGTCTTTGGTC 60.407 57.143 17.73 0.00 0.00 4.02
5429 6249 0.249398 ATTCCGGGAGTCTTTGGTCG 59.751 55.000 0.00 0.00 0.00 4.79
5430 6250 1.117142 TTCCGGGAGTCTTTGGTCGT 61.117 55.000 0.00 0.00 0.00 4.34
5431 6251 1.117142 TCCGGGAGTCTTTGGTCGTT 61.117 55.000 0.00 0.00 0.00 3.85
5432 6252 0.949105 CCGGGAGTCTTTGGTCGTTG 60.949 60.000 0.00 0.00 0.00 4.10
5433 6253 0.949105 CGGGAGTCTTTGGTCGTTGG 60.949 60.000 0.00 0.00 0.00 3.77
5434 6254 0.605589 GGGAGTCTTTGGTCGTTGGG 60.606 60.000 0.00 0.00 0.00 4.12
5435 6255 0.605589 GGAGTCTTTGGTCGTTGGGG 60.606 60.000 0.00 0.00 0.00 4.96
5436 6256 1.228154 AGTCTTTGGTCGTTGGGGC 60.228 57.895 0.00 0.00 0.00 5.80
5437 6257 1.228154 GTCTTTGGTCGTTGGGGCT 60.228 57.895 0.00 0.00 0.00 5.19
5438 6258 0.822121 GTCTTTGGTCGTTGGGGCTT 60.822 55.000 0.00 0.00 0.00 4.35
5439 6259 0.821711 TCTTTGGTCGTTGGGGCTTG 60.822 55.000 0.00 0.00 0.00 4.01
5440 6260 1.805428 CTTTGGTCGTTGGGGCTTGG 61.805 60.000 0.00 0.00 0.00 3.61
5441 6261 2.575455 TTTGGTCGTTGGGGCTTGGT 62.575 55.000 0.00 0.00 0.00 3.67
5442 6262 1.706995 TTGGTCGTTGGGGCTTGGTA 61.707 55.000 0.00 0.00 0.00 3.25
5443 6263 1.301954 GGTCGTTGGGGCTTGGTAT 59.698 57.895 0.00 0.00 0.00 2.73
5444 6264 0.542805 GGTCGTTGGGGCTTGGTATA 59.457 55.000 0.00 0.00 0.00 1.47
5445 6265 1.142262 GGTCGTTGGGGCTTGGTATAT 59.858 52.381 0.00 0.00 0.00 0.86
5446 6266 2.369532 GGTCGTTGGGGCTTGGTATATA 59.630 50.000 0.00 0.00 0.00 0.86
5447 6267 3.008704 GGTCGTTGGGGCTTGGTATATAT 59.991 47.826 0.00 0.00 0.00 0.86
5448 6268 4.000988 GTCGTTGGGGCTTGGTATATATG 58.999 47.826 0.00 0.00 0.00 1.78
5449 6269 3.008594 TCGTTGGGGCTTGGTATATATGG 59.991 47.826 0.00 0.00 0.00 2.74
5450 6270 3.244770 CGTTGGGGCTTGGTATATATGGT 60.245 47.826 0.00 0.00 0.00 3.55
5451 6271 4.079253 GTTGGGGCTTGGTATATATGGTG 58.921 47.826 0.00 0.00 0.00 4.17
5452 6272 2.647299 TGGGGCTTGGTATATATGGTGG 59.353 50.000 0.00 0.00 0.00 4.61
5453 6273 2.620627 GGGGCTTGGTATATATGGTGGC 60.621 54.545 0.00 0.00 0.00 5.01
5454 6274 2.041081 GGGCTTGGTATATATGGTGGCA 59.959 50.000 0.00 0.00 0.00 4.92
5455 6275 3.499563 GGGCTTGGTATATATGGTGGCAA 60.500 47.826 0.00 0.00 0.00 4.52
5456 6276 3.506067 GGCTTGGTATATATGGTGGCAAC 59.494 47.826 0.00 0.00 0.00 4.17
5457 6277 3.188460 GCTTGGTATATATGGTGGCAACG 59.812 47.826 0.00 0.00 42.51 4.10
5458 6278 4.637276 CTTGGTATATATGGTGGCAACGA 58.363 43.478 0.00 0.00 42.51 3.85
5459 6279 3.997762 TGGTATATATGGTGGCAACGAC 58.002 45.455 0.00 0.00 42.51 4.34
5460 6280 2.991190 GGTATATATGGTGGCAACGACG 59.009 50.000 0.00 0.00 42.51 5.12
5461 6281 3.305539 GGTATATATGGTGGCAACGACGA 60.306 47.826 0.00 0.00 42.51 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
171 172 1.423794 TTCCGCCCTCACTCCCTTTT 61.424 55.000 0.00 0.00 0.00 2.27
172 173 1.842381 CTTCCGCCCTCACTCCCTTT 61.842 60.000 0.00 0.00 0.00 3.11
372 417 3.136443 TGTTGGATTCAGTGGTGAGAAGT 59.864 43.478 0.00 0.00 32.98 3.01
549 594 2.814336 GTGATTCGTTTGCTCTTCCCTT 59.186 45.455 0.00 0.00 0.00 3.95
619 664 6.364568 AATTGGAGCAAAATAAAAGAGCCT 57.635 33.333 0.00 0.00 0.00 4.58
747 801 3.508793 CACATCAGCAAATCTTCCACCTT 59.491 43.478 0.00 0.00 0.00 3.50
846 907 1.033574 AAGATCTGGATCGGACGGTC 58.966 55.000 0.00 0.00 42.48 4.79
877 938 5.073554 TCCTATATACGAGGGGTTGAGTACA 59.926 44.000 0.00 0.00 34.56 2.90
906 977 1.869342 CGGGTTCGGTACTCGTTTTGT 60.869 52.381 0.00 0.00 45.78 2.83
928 999 1.003233 GTGAGAGGGGAACGGAATTGT 59.997 52.381 0.00 0.00 0.00 2.71
1384 1487 9.983804 CGGAAAATTACTTCCACTAACTAATTC 57.016 33.333 9.14 0.00 44.52 2.17
1622 2348 8.084684 GCATCTACCAAAAGAAAGACAGAAATT 58.915 33.333 0.00 0.00 0.00 1.82
1793 2519 4.415881 TCTTGCCTGAAGACACACTAAA 57.584 40.909 0.00 0.00 35.64 1.85
1838 2564 2.834549 ACAGAGTACAGTGGAAGGATGG 59.165 50.000 0.00 0.00 0.00 3.51
1867 2593 3.190535 CCACCTCCTATTTTCCAAACACG 59.809 47.826 0.00 0.00 0.00 4.49
1906 2632 3.479489 TCTGTTCTTCATTTCTGCAGCA 58.521 40.909 9.47 0.00 0.00 4.41
1959 2685 7.271438 GGCAGAAATTCGAAAGAGAAATGTTAC 59.729 37.037 0.00 0.00 43.69 2.50
2027 2753 3.664320 TCCATCTTTAGCATCCCCAGTA 58.336 45.455 0.00 0.00 0.00 2.74
2081 2807 5.046304 ACAAGCAGAGAAGGAGTAGCATTAA 60.046 40.000 0.00 0.00 0.00 1.40
2091 2817 8.321353 TCAATAAAGATAACAAGCAGAGAAGGA 58.679 33.333 0.00 0.00 0.00 3.36
2099 2825 8.801299 TGTTCCAATCAATAAAGATAACAAGCA 58.199 29.630 0.00 0.00 0.00 3.91
2124 2850 6.570692 AGATAAGGATGAAATTGCTGCTTTG 58.429 36.000 0.00 0.00 0.00 2.77
2145 2871 8.161699 ACGTAACCTACAATTCAAACAAAGAT 57.838 30.769 0.00 0.00 0.00 2.40
2158 2885 3.305813 CCTCAAGCAGACGTAACCTACAA 60.306 47.826 0.00 0.00 0.00 2.41
2252 2979 6.942576 ACCAACTAGTGCTTTGATGTAAATCT 59.057 34.615 0.00 0.00 0.00 2.40
2342 3069 4.265073 AGCAGAAGAAGCCAAACGATTAT 58.735 39.130 0.00 0.00 0.00 1.28
2343 3070 3.674997 AGCAGAAGAAGCCAAACGATTA 58.325 40.909 0.00 0.00 0.00 1.75
2344 3071 2.508526 AGCAGAAGAAGCCAAACGATT 58.491 42.857 0.00 0.00 0.00 3.34
2345 3072 2.191128 AGCAGAAGAAGCCAAACGAT 57.809 45.000 0.00 0.00 0.00 3.73
2346 3073 2.037251 ACTAGCAGAAGAAGCCAAACGA 59.963 45.455 0.00 0.00 0.00 3.85
2347 3074 2.417719 ACTAGCAGAAGAAGCCAAACG 58.582 47.619 0.00 0.00 0.00 3.60
2348 3075 5.412904 ACATTACTAGCAGAAGAAGCCAAAC 59.587 40.000 0.00 0.00 0.00 2.93
2349 3076 5.560724 ACATTACTAGCAGAAGAAGCCAAA 58.439 37.500 0.00 0.00 0.00 3.28
2372 3099 4.904853 GGGCCCATATCAAATAGGGAAAAA 59.095 41.667 19.95 0.00 44.30 1.94
2373 3100 4.488770 GGGCCCATATCAAATAGGGAAAA 58.511 43.478 19.95 0.00 44.30 2.29
2433 3160 3.211000 AGATATCCAGTCTCCCCTCCTTT 59.789 47.826 0.00 0.00 0.00 3.11
2531 3258 5.232463 AGTCACAAGGCAATGCTAAAATTG 58.768 37.500 4.82 5.77 39.98 2.32
2677 3405 8.351461 CAACCATTTTTCTGCCAACAATAAAAT 58.649 29.630 0.00 0.00 32.94 1.82
2683 3411 4.213564 ACAACCATTTTTCTGCCAACAA 57.786 36.364 0.00 0.00 0.00 2.83
2716 3446 6.076981 AGCTGAAAAGGAAACATGTAACAG 57.923 37.500 0.00 2.03 0.00 3.16
2718 3448 7.112984 CGTTAAGCTGAAAAGGAAACATGTAAC 59.887 37.037 0.00 0.00 0.00 2.50
2773 3503 6.199908 CACGCTTTGGATTAAACAAAACATGA 59.800 34.615 0.00 0.00 37.37 3.07
2830 3560 9.638239 GGAAACAAATGATGCTGATTTTAACTA 57.362 29.630 0.00 0.00 0.00 2.24
2856 3586 6.646653 ACCACACAATGATATTAGATACGCAG 59.353 38.462 0.00 0.00 0.00 5.18
2879 3609 1.546476 AGACCATCTTGAGACACGACC 59.454 52.381 0.00 0.00 0.00 4.79
2883 3613 2.462456 TGCAGACCATCTTGAGACAC 57.538 50.000 0.00 0.00 0.00 3.67
2915 3645 6.309712 ACTGTGCATTACATTCATATCAGC 57.690 37.500 0.00 0.00 38.92 4.26
2950 3680 4.996758 GCTGCCAAATTTTAAGTGGTCAAT 59.003 37.500 0.00 0.00 34.71 2.57
2955 3685 6.212888 AGATAGCTGCCAAATTTTAAGTGG 57.787 37.500 0.00 0.00 35.39 4.00
2961 3691 8.633561 GGAGTAAATAGATAGCTGCCAAATTTT 58.366 33.333 0.00 0.00 0.00 1.82
3007 3737 4.302559 AGGGGAATCAGGAGTAAACAAC 57.697 45.455 0.00 0.00 0.00 3.32
3025 3755 1.915078 ATGCGGACCTGGAAGAAGGG 61.915 60.000 0.00 0.00 42.11 3.95
3031 3762 1.220749 GTAGCATGCGGACCTGGAA 59.779 57.895 13.01 0.00 0.00 3.53
3037 3768 0.249238 CTCTCCAGTAGCATGCGGAC 60.249 60.000 13.01 14.54 0.00 4.79
3060 3791 3.307199 CCCATTTTCCAGCAAGAGCATTT 60.307 43.478 0.00 0.00 45.49 2.32
3227 3958 6.456181 GCACTATCACTCATGAGCAGTAAAAC 60.456 42.308 22.83 3.74 38.57 2.43
3229 3960 5.105187 AGCACTATCACTCATGAGCAGTAAA 60.105 40.000 22.83 3.04 38.57 2.01
3234 3965 3.900966 AAGCACTATCACTCATGAGCA 57.099 42.857 22.83 10.01 38.57 4.26
3396 4127 0.110486 GGCACTCTGGTCCAAGGAAA 59.890 55.000 0.00 0.00 0.00 3.13
3406 4137 3.055530 AGAACTTGTAGATGGCACTCTGG 60.056 47.826 8.95 1.98 0.00 3.86
3455 4186 8.635765 TTGGGGATATGCAAGAAATATCTAAC 57.364 34.615 0.00 0.00 37.24 2.34
3632 4367 7.659390 AGGTCAACTAAGATCTGACAAGAAAAG 59.341 37.037 12.51 0.00 41.03 2.27
3633 4368 7.509546 AGGTCAACTAAGATCTGACAAGAAAA 58.490 34.615 12.51 0.00 41.03 2.29
3681 4416 9.492973 GTAAACTACAAGGAAGGTACATACAAA 57.507 33.333 0.00 0.00 0.00 2.83
3688 4423 7.440198 AGTTCAGTAAACTACAAGGAAGGTAC 58.560 38.462 0.00 0.00 46.55 3.34
3714 4449 2.834549 ACTTCTTCGTCACTCCATCCAT 59.165 45.455 0.00 0.00 0.00 3.41
3715 4450 2.029020 CACTTCTTCGTCACTCCATCCA 60.029 50.000 0.00 0.00 0.00 3.41
3717 4452 3.191581 TCTCACTTCTTCGTCACTCCATC 59.808 47.826 0.00 0.00 0.00 3.51
3775 4510 2.801342 GCTAGAGAGCTTCAACGGATGG 60.801 54.545 0.00 0.00 45.98 3.51
3825 4560 5.360714 AGAGTGCTTCACTTTCCAATGAAAA 59.639 36.000 0.66 0.00 45.44 2.29
3838 4574 5.061560 CGAATAGTCAAAGAGAGTGCTTCAC 59.938 44.000 0.00 0.00 34.10 3.18
3884 4620 7.281324 TGCTCGAATTTCCCTAAAATAAATCGA 59.719 33.333 0.00 0.00 39.77 3.59
3919 4655 4.441495 CGTTGCTAGAGGTTCACCATGATA 60.441 45.833 0.00 0.00 38.89 2.15
3956 4692 7.287696 ACAAATAATCAACAGTCCCAAGAAACT 59.712 33.333 0.00 0.00 0.00 2.66
4022 4758 3.601443 AGAGACTCAGCCACATTGTAC 57.399 47.619 5.02 0.00 0.00 2.90
4038 4774 6.070767 CCAGGAGTATACCTTCAACAAAGAGA 60.071 42.308 0.00 0.00 38.32 3.10
4091 4827 2.636830 CTCAAAGCATCCACAGGTAGG 58.363 52.381 0.00 0.00 0.00 3.18
4171 4907 7.712205 CCATGTCCTTTTTCACAGAAAGATTTT 59.288 33.333 0.00 0.00 36.45 1.82
4180 4916 7.264947 AGTTTAAACCATGTCCTTTTTCACAG 58.735 34.615 14.72 0.00 0.00 3.66
4219 4958 5.957842 ATTTACAGCCAAAACTCGAATCA 57.042 34.783 0.00 0.00 0.00 2.57
4281 5020 8.183536 TCCTGATAAATTTTCAACATGACATCG 58.816 33.333 0.00 0.00 0.00 3.84
4291 5030 5.957168 TGCCCATCTCCTGATAAATTTTCAA 59.043 36.000 0.00 0.00 0.00 2.69
4468 5210 9.802039 TTCCTACCAATTGAATAACTAACTTGT 57.198 29.630 7.12 0.00 0.00 3.16
4562 5304 1.307097 GCATCTGAATCCTGACTGGC 58.693 55.000 0.00 0.00 35.26 4.85
4633 5375 2.358582 CACCTTGCACATTCACTCACAA 59.641 45.455 0.00 0.00 0.00 3.33
4820 5595 7.171678 GCGCAAAATAGGAGAATAGATACACTT 59.828 37.037 0.30 0.00 0.00 3.16
4859 5634 6.898041 TGCACGTTAAATCATAATGATAGCC 58.102 36.000 0.00 0.00 35.76 3.93
4866 5641 4.640201 ACAGCCTGCACGTTAAATCATAAT 59.360 37.500 0.00 0.00 0.00 1.28
4885 5662 4.174009 ACATTACAGTCGTCATGTACAGC 58.826 43.478 0.33 0.00 38.02 4.40
4904 5681 5.531659 CAGGGTATAGACAGAACGAGTACAT 59.468 44.000 0.00 0.00 0.00 2.29
4937 5751 7.045693 TGGTTAGTCTCCTCCTATATAGCAT 57.954 40.000 4.04 0.00 0.00 3.79
5010 5828 9.654663 AACTAAAGTAATGATCTAAACGCTCTT 57.345 29.630 0.00 0.00 0.00 2.85
5032 5850 9.865321 ACAAATGTAAGAGCGTTTAGATAACTA 57.135 29.630 0.00 0.00 0.00 2.24
5033 5851 8.773404 ACAAATGTAAGAGCGTTTAGATAACT 57.227 30.769 0.00 0.00 0.00 2.24
5034 5852 9.821662 AAACAAATGTAAGAGCGTTTAGATAAC 57.178 29.630 0.00 0.00 0.00 1.89
5037 5855 9.988350 CATAAACAAATGTAAGAGCGTTTAGAT 57.012 29.630 0.00 0.00 33.70 1.98
5038 5856 8.447833 CCATAAACAAATGTAAGAGCGTTTAGA 58.552 33.333 0.00 0.00 33.70 2.10
5039 5857 8.447833 TCCATAAACAAATGTAAGAGCGTTTAG 58.552 33.333 0.00 0.00 33.70 1.85
5040 5858 8.325421 TCCATAAACAAATGTAAGAGCGTTTA 57.675 30.769 0.00 0.00 34.43 2.01
5041 5859 7.209471 TCCATAAACAAATGTAAGAGCGTTT 57.791 32.000 0.00 0.00 0.00 3.60
5042 5860 6.128007 CCTCCATAAACAAATGTAAGAGCGTT 60.128 38.462 0.00 0.00 0.00 4.84
5043 5861 5.354234 CCTCCATAAACAAATGTAAGAGCGT 59.646 40.000 0.00 0.00 0.00 5.07
5044 5862 5.220854 CCCTCCATAAACAAATGTAAGAGCG 60.221 44.000 0.00 0.00 0.00 5.03
5045 5863 5.885912 TCCCTCCATAAACAAATGTAAGAGC 59.114 40.000 0.00 0.00 0.00 4.09
5046 5864 7.066284 CACTCCCTCCATAAACAAATGTAAGAG 59.934 40.741 0.00 0.00 0.00 2.85
5047 5865 6.884295 CACTCCCTCCATAAACAAATGTAAGA 59.116 38.462 0.00 0.00 0.00 2.10
5048 5866 6.659242 ACACTCCCTCCATAAACAAATGTAAG 59.341 38.462 0.00 0.00 0.00 2.34
5049 5867 6.548321 ACACTCCCTCCATAAACAAATGTAA 58.452 36.000 0.00 0.00 0.00 2.41
5050 5868 6.134535 ACACTCCCTCCATAAACAAATGTA 57.865 37.500 0.00 0.00 0.00 2.29
5051 5869 4.998051 ACACTCCCTCCATAAACAAATGT 58.002 39.130 0.00 0.00 0.00 2.71
5052 5870 5.009631 TGACACTCCCTCCATAAACAAATG 58.990 41.667 0.00 0.00 0.00 2.32
5053 5871 5.255397 TGACACTCCCTCCATAAACAAAT 57.745 39.130 0.00 0.00 0.00 2.32
5054 5872 4.715534 TGACACTCCCTCCATAAACAAA 57.284 40.909 0.00 0.00 0.00 2.83
5055 5873 4.622933 CGATGACACTCCCTCCATAAACAA 60.623 45.833 0.00 0.00 0.00 2.83
5056 5874 3.118775 CGATGACACTCCCTCCATAAACA 60.119 47.826 0.00 0.00 0.00 2.83
5057 5875 3.132289 TCGATGACACTCCCTCCATAAAC 59.868 47.826 0.00 0.00 0.00 2.01
5058 5876 3.371034 TCGATGACACTCCCTCCATAAA 58.629 45.455 0.00 0.00 0.00 1.40
5059 5877 3.026707 TCGATGACACTCCCTCCATAA 57.973 47.619 0.00 0.00 0.00 1.90
5060 5878 2.748209 TCGATGACACTCCCTCCATA 57.252 50.000 0.00 0.00 0.00 2.74
5061 5879 1.690893 CATCGATGACACTCCCTCCAT 59.309 52.381 21.02 0.00 0.00 3.41
5062 5880 1.114627 CATCGATGACACTCCCTCCA 58.885 55.000 21.02 0.00 0.00 3.86
5063 5881 1.339610 CTCATCGATGACACTCCCTCC 59.660 57.143 23.99 0.00 32.50 4.30
5064 5882 1.339610 CCTCATCGATGACACTCCCTC 59.660 57.143 23.99 0.00 32.50 4.30
5065 5883 1.407936 CCTCATCGATGACACTCCCT 58.592 55.000 23.99 0.00 32.50 4.20
5066 5884 0.249657 GCCTCATCGATGACACTCCC 60.250 60.000 23.99 5.42 32.50 4.30
5067 5885 0.249657 GGCCTCATCGATGACACTCC 60.250 60.000 23.99 16.83 32.50 3.85
5068 5886 0.461548 TGGCCTCATCGATGACACTC 59.538 55.000 23.99 13.58 32.50 3.51
5069 5887 0.463204 CTGGCCTCATCGATGACACT 59.537 55.000 23.99 0.00 32.50 3.55
5070 5888 0.531532 CCTGGCCTCATCGATGACAC 60.532 60.000 23.99 17.45 32.50 3.67
5127 5947 1.137404 CATGTAAAGCACGCCAGGC 59.863 57.895 0.00 0.00 0.00 4.85
5128 5948 0.960364 ACCATGTAAAGCACGCCAGG 60.960 55.000 0.00 0.00 0.00 4.45
5129 5949 1.732941 TACCATGTAAAGCACGCCAG 58.267 50.000 0.00 0.00 0.00 4.85
5130 5950 2.411628 ATACCATGTAAAGCACGCCA 57.588 45.000 0.00 0.00 0.00 5.69
5131 5951 2.422127 ACAATACCATGTAAAGCACGCC 59.578 45.455 0.00 0.00 0.00 5.68
5132 5952 3.486875 GGACAATACCATGTAAAGCACGC 60.487 47.826 0.00 0.00 32.57 5.34
5133 5953 3.064820 GGGACAATACCATGTAAAGCACG 59.935 47.826 0.00 0.00 32.57 5.34
5134 5954 4.013728 TGGGACAATACCATGTAAAGCAC 58.986 43.478 0.00 0.00 32.57 4.40
5135 5955 4.269183 CTGGGACAATACCATGTAAAGCA 58.731 43.478 0.00 0.00 38.70 3.91
5136 5956 3.632145 CCTGGGACAATACCATGTAAAGC 59.368 47.826 0.00 0.00 38.70 3.51
5137 5957 4.080015 TCCCTGGGACAATACCATGTAAAG 60.080 45.833 12.53 0.00 38.70 1.85
5138 5958 3.853181 TCCCTGGGACAATACCATGTAAA 59.147 43.478 12.53 0.00 38.70 2.01
5139 5959 3.465832 TCCCTGGGACAATACCATGTAA 58.534 45.455 12.53 0.00 38.70 2.41
5140 5960 3.138123 TCCCTGGGACAATACCATGTA 57.862 47.619 12.53 0.00 38.70 2.29
5141 5961 1.979809 TCCCTGGGACAATACCATGT 58.020 50.000 12.53 0.00 38.70 3.21
5142 5962 2.175499 ACATCCCTGGGACAATACCATG 59.825 50.000 19.82 12.30 38.70 3.66
5143 5963 2.443255 GACATCCCTGGGACAATACCAT 59.557 50.000 19.82 0.00 38.70 3.55
5144 5964 1.843851 GACATCCCTGGGACAATACCA 59.156 52.381 19.82 0.00 38.70 3.25
5145 5965 1.202651 CGACATCCCTGGGACAATACC 60.203 57.143 19.82 3.60 38.70 2.73
5146 5966 1.760613 TCGACATCCCTGGGACAATAC 59.239 52.381 19.82 7.31 38.70 1.89
5147 5967 2.168458 TCGACATCCCTGGGACAATA 57.832 50.000 19.82 0.00 38.70 1.90
5148 5968 1.417890 GATCGACATCCCTGGGACAAT 59.582 52.381 19.82 6.22 38.70 2.71
5149 5969 0.830648 GATCGACATCCCTGGGACAA 59.169 55.000 19.82 2.06 38.70 3.18
5150 5970 0.032117 AGATCGACATCCCTGGGACA 60.032 55.000 19.82 0.00 32.98 4.02
5151 5971 1.123928 AAGATCGACATCCCTGGGAC 58.876 55.000 19.82 4.48 32.98 4.46
5152 5972 1.123077 CAAGATCGACATCCCTGGGA 58.877 55.000 19.69 19.69 35.55 4.37
5153 5973 0.107456 CCAAGATCGACATCCCTGGG 59.893 60.000 6.33 6.33 32.27 4.45
5154 5974 0.533755 GCCAAGATCGACATCCCTGG 60.534 60.000 0.00 0.00 36.31 4.45
5155 5975 0.178767 TGCCAAGATCGACATCCCTG 59.821 55.000 0.00 0.00 0.00 4.45
5156 5976 0.911769 TTGCCAAGATCGACATCCCT 59.088 50.000 0.00 0.00 0.00 4.20
5157 5977 1.401905 GTTTGCCAAGATCGACATCCC 59.598 52.381 0.00 0.00 0.00 3.85
5158 5978 2.083774 TGTTTGCCAAGATCGACATCC 58.916 47.619 0.00 0.00 0.00 3.51
5159 5979 3.002791 TCTGTTTGCCAAGATCGACATC 58.997 45.455 0.00 0.00 0.00 3.06
5160 5980 2.744202 GTCTGTTTGCCAAGATCGACAT 59.256 45.455 0.00 0.00 0.00 3.06
5161 5981 2.143122 GTCTGTTTGCCAAGATCGACA 58.857 47.619 0.00 0.00 0.00 4.35
5162 5982 2.096218 GTGTCTGTTTGCCAAGATCGAC 60.096 50.000 0.00 0.00 0.00 4.20
5163 5983 2.143122 GTGTCTGTTTGCCAAGATCGA 58.857 47.619 0.00 0.00 0.00 3.59
5164 5984 1.872952 TGTGTCTGTTTGCCAAGATCG 59.127 47.619 0.00 0.00 0.00 3.69
5165 5985 3.503363 TGATGTGTCTGTTTGCCAAGATC 59.497 43.478 0.00 0.00 0.00 2.75
5166 5986 3.489355 TGATGTGTCTGTTTGCCAAGAT 58.511 40.909 0.00 0.00 0.00 2.40
5167 5987 2.929641 TGATGTGTCTGTTTGCCAAGA 58.070 42.857 0.00 0.00 0.00 3.02
5168 5988 3.551454 CCTTGATGTGTCTGTTTGCCAAG 60.551 47.826 0.00 0.00 0.00 3.61
5169 5989 2.361757 CCTTGATGTGTCTGTTTGCCAA 59.638 45.455 0.00 0.00 0.00 4.52
5170 5990 1.955778 CCTTGATGTGTCTGTTTGCCA 59.044 47.619 0.00 0.00 0.00 4.92
5171 5991 1.956477 ACCTTGATGTGTCTGTTTGCC 59.044 47.619 0.00 0.00 0.00 4.52
5172 5992 3.563808 TGTACCTTGATGTGTCTGTTTGC 59.436 43.478 0.00 0.00 0.00 3.68
5173 5993 4.319766 GCTGTACCTTGATGTGTCTGTTTG 60.320 45.833 0.00 0.00 0.00 2.93
5174 5994 3.815401 GCTGTACCTTGATGTGTCTGTTT 59.185 43.478 0.00 0.00 0.00 2.83
5175 5995 3.403038 GCTGTACCTTGATGTGTCTGTT 58.597 45.455 0.00 0.00 0.00 3.16
5176 5996 2.289694 GGCTGTACCTTGATGTGTCTGT 60.290 50.000 0.00 0.00 34.51 3.41
5177 5997 2.350522 GGCTGTACCTTGATGTGTCTG 58.649 52.381 0.00 0.00 34.51 3.51
5178 5998 2.770164 GGCTGTACCTTGATGTGTCT 57.230 50.000 0.00 0.00 34.51 3.41
5189 6009 0.749454 CTGGGCATTGAGGCTGTACC 60.749 60.000 0.00 0.00 43.56 3.34
5190 6010 0.035056 ACTGGGCATTGAGGCTGTAC 60.035 55.000 0.00 0.00 43.56 2.90
5191 6011 1.578897 TACTGGGCATTGAGGCTGTA 58.421 50.000 0.00 0.00 43.56 2.74
5192 6012 0.921896 ATACTGGGCATTGAGGCTGT 59.078 50.000 0.00 0.00 43.56 4.40
5193 6013 1.315690 CATACTGGGCATTGAGGCTG 58.684 55.000 0.00 0.00 43.56 4.85
5194 6014 0.466922 GCATACTGGGCATTGAGGCT 60.467 55.000 0.00 0.00 43.56 4.58
5195 6015 0.752743 TGCATACTGGGCATTGAGGC 60.753 55.000 0.00 0.00 43.27 4.70
5196 6016 1.679680 CTTGCATACTGGGCATTGAGG 59.320 52.381 0.00 0.00 41.58 3.86
5197 6017 1.066605 GCTTGCATACTGGGCATTGAG 59.933 52.381 0.00 0.00 41.58 3.02
5198 6018 1.105457 GCTTGCATACTGGGCATTGA 58.895 50.000 0.00 0.00 41.58 2.57
5199 6019 0.818938 TGCTTGCATACTGGGCATTG 59.181 50.000 0.00 0.00 41.58 2.82
5200 6020 1.479323 CTTGCTTGCATACTGGGCATT 59.521 47.619 0.00 0.00 41.58 3.56
5201 6021 1.108776 CTTGCTTGCATACTGGGCAT 58.891 50.000 0.00 0.00 41.58 4.40
5202 6022 0.966875 CCTTGCTTGCATACTGGGCA 60.967 55.000 0.00 0.00 40.00 5.36
5203 6023 1.669999 CCCTTGCTTGCATACTGGGC 61.670 60.000 0.00 0.00 0.00 5.36
5204 6024 1.039233 CCCCTTGCTTGCATACTGGG 61.039 60.000 12.90 12.90 0.00 4.45
5205 6025 1.669999 GCCCCTTGCTTGCATACTGG 61.670 60.000 0.00 0.00 36.87 4.00
5206 6026 0.966875 TGCCCCTTGCTTGCATACTG 60.967 55.000 0.00 0.00 42.00 2.74
5207 6027 0.251742 TTGCCCCTTGCTTGCATACT 60.252 50.000 0.00 0.00 42.00 2.12
5208 6028 0.174162 CTTGCCCCTTGCTTGCATAC 59.826 55.000 0.00 0.00 42.00 2.39
5209 6029 1.606885 GCTTGCCCCTTGCTTGCATA 61.607 55.000 0.00 0.00 42.00 3.14
5210 6030 2.951101 GCTTGCCCCTTGCTTGCAT 61.951 57.895 0.00 0.00 42.00 3.96
5211 6031 3.618750 GCTTGCCCCTTGCTTGCA 61.619 61.111 0.00 0.00 42.00 4.08
5212 6032 3.167822 TTGCTTGCCCCTTGCTTGC 62.168 57.895 0.00 0.00 42.00 4.01
5213 6033 1.005394 CTTGCTTGCCCCTTGCTTG 60.005 57.895 0.00 0.00 42.00 4.01
5214 6034 2.212110 CCTTGCTTGCCCCTTGCTT 61.212 57.895 0.00 0.00 42.00 3.91
5215 6035 2.602568 CCTTGCTTGCCCCTTGCT 60.603 61.111 0.00 0.00 42.00 3.91
5216 6036 3.698820 CCCTTGCTTGCCCCTTGC 61.699 66.667 0.00 0.00 41.77 4.01
5217 6037 2.999063 CCCCTTGCTTGCCCCTTG 60.999 66.667 0.00 0.00 0.00 3.61
5223 6043 3.752339 CTTCCGCCCCTTGCTTGC 61.752 66.667 0.00 0.00 38.05 4.01
5224 6044 0.107214 TATCTTCCGCCCCTTGCTTG 60.107 55.000 0.00 0.00 38.05 4.01
5225 6045 0.846693 ATATCTTCCGCCCCTTGCTT 59.153 50.000 0.00 0.00 38.05 3.91
5226 6046 0.109342 CATATCTTCCGCCCCTTGCT 59.891 55.000 0.00 0.00 38.05 3.91
5227 6047 1.518903 GCATATCTTCCGCCCCTTGC 61.519 60.000 0.00 0.00 0.00 4.01
5228 6048 1.230635 CGCATATCTTCCGCCCCTTG 61.231 60.000 0.00 0.00 0.00 3.61
5229 6049 1.071471 CGCATATCTTCCGCCCCTT 59.929 57.895 0.00 0.00 0.00 3.95
5230 6050 1.837051 TCGCATATCTTCCGCCCCT 60.837 57.895 0.00 0.00 0.00 4.79
5231 6051 1.668151 GTCGCATATCTTCCGCCCC 60.668 63.158 0.00 0.00 0.00 5.80
5232 6052 0.320771 ATGTCGCATATCTTCCGCCC 60.321 55.000 0.00 0.00 0.00 6.13
5233 6053 1.071605 GATGTCGCATATCTTCCGCC 58.928 55.000 0.00 0.00 0.00 6.13
5234 6054 1.723542 CAGATGTCGCATATCTTCCGC 59.276 52.381 0.00 0.00 32.75 5.54
5235 6055 3.288809 TCAGATGTCGCATATCTTCCG 57.711 47.619 0.00 0.00 32.75 4.30
5236 6056 4.564041 ACATCAGATGTCGCATATCTTCC 58.436 43.478 10.53 0.00 39.92 3.46
5237 6057 6.536731 AAACATCAGATGTCGCATATCTTC 57.463 37.500 16.69 0.00 44.07 2.87
5238 6058 6.986231 TGTAAACATCAGATGTCGCATATCTT 59.014 34.615 16.69 7.21 44.07 2.40
5239 6059 6.515832 TGTAAACATCAGATGTCGCATATCT 58.484 36.000 16.69 0.00 44.07 1.98
5240 6060 6.769608 TGTAAACATCAGATGTCGCATATC 57.230 37.500 16.69 4.67 44.07 1.63
5241 6061 6.707608 ACATGTAAACATCAGATGTCGCATAT 59.292 34.615 16.69 7.93 44.07 1.78
5242 6062 6.018832 CACATGTAAACATCAGATGTCGCATA 60.019 38.462 16.69 5.55 44.07 3.14
5243 6063 4.877823 ACATGTAAACATCAGATGTCGCAT 59.122 37.500 16.69 16.19 44.07 4.73
5244 6064 4.093261 CACATGTAAACATCAGATGTCGCA 59.907 41.667 16.69 14.81 44.07 5.10
5245 6065 4.329801 TCACATGTAAACATCAGATGTCGC 59.670 41.667 16.69 10.07 44.07 5.19
5246 6066 6.407475 TTCACATGTAAACATCAGATGTCG 57.593 37.500 16.69 4.43 44.07 4.35
5247 6067 8.032952 TCTTTCACATGTAAACATCAGATGTC 57.967 34.615 16.69 5.22 44.07 3.06
5249 6069 6.965500 GCTCTTTCACATGTAAACATCAGATG 59.035 38.462 9.03 9.03 33.61 2.90
5250 6070 6.656270 TGCTCTTTCACATGTAAACATCAGAT 59.344 34.615 0.00 0.00 33.61 2.90
5251 6071 5.997129 TGCTCTTTCACATGTAAACATCAGA 59.003 36.000 0.00 0.00 33.61 3.27
5252 6072 6.245115 TGCTCTTTCACATGTAAACATCAG 57.755 37.500 0.00 0.00 33.61 2.90
5253 6073 6.631971 TTGCTCTTTCACATGTAAACATCA 57.368 33.333 0.00 0.00 33.61 3.07
5254 6074 7.862372 TCTTTTGCTCTTTCACATGTAAACATC 59.138 33.333 0.00 0.00 33.61 3.06
5255 6075 7.715657 TCTTTTGCTCTTTCACATGTAAACAT 58.284 30.769 0.00 0.00 36.96 2.71
5256 6076 7.094508 TCTTTTGCTCTTTCACATGTAAACA 57.905 32.000 0.00 0.00 0.00 2.83
5257 6077 7.702348 ACTTCTTTTGCTCTTTCACATGTAAAC 59.298 33.333 0.00 0.00 0.00 2.01
5258 6078 7.771183 ACTTCTTTTGCTCTTTCACATGTAAA 58.229 30.769 0.00 0.00 0.00 2.01
5259 6079 7.333528 ACTTCTTTTGCTCTTTCACATGTAA 57.666 32.000 0.00 0.00 0.00 2.41
5260 6080 6.942532 ACTTCTTTTGCTCTTTCACATGTA 57.057 33.333 0.00 0.00 0.00 2.29
5261 6081 5.841957 ACTTCTTTTGCTCTTTCACATGT 57.158 34.783 0.00 0.00 0.00 3.21
5262 6082 6.805271 CCATACTTCTTTTGCTCTTTCACATG 59.195 38.462 0.00 0.00 0.00 3.21
5263 6083 6.716628 TCCATACTTCTTTTGCTCTTTCACAT 59.283 34.615 0.00 0.00 0.00 3.21
5264 6084 6.061441 TCCATACTTCTTTTGCTCTTTCACA 58.939 36.000 0.00 0.00 0.00 3.58
5265 6085 6.560253 TCCATACTTCTTTTGCTCTTTCAC 57.440 37.500 0.00 0.00 0.00 3.18
5266 6086 6.998074 TCTTCCATACTTCTTTTGCTCTTTCA 59.002 34.615 0.00 0.00 0.00 2.69
5267 6087 7.440523 TCTTCCATACTTCTTTTGCTCTTTC 57.559 36.000 0.00 0.00 0.00 2.62
5268 6088 7.823745 TTCTTCCATACTTCTTTTGCTCTTT 57.176 32.000 0.00 0.00 0.00 2.52
5269 6089 7.503902 AGTTTCTTCCATACTTCTTTTGCTCTT 59.496 33.333 0.00 0.00 0.00 2.85
5270 6090 7.001073 AGTTTCTTCCATACTTCTTTTGCTCT 58.999 34.615 0.00 0.00 0.00 4.09
5271 6091 7.080724 CAGTTTCTTCCATACTTCTTTTGCTC 58.919 38.462 0.00 0.00 0.00 4.26
5272 6092 6.015940 CCAGTTTCTTCCATACTTCTTTTGCT 60.016 38.462 0.00 0.00 0.00 3.91
5273 6093 6.152379 CCAGTTTCTTCCATACTTCTTTTGC 58.848 40.000 0.00 0.00 0.00 3.68
5274 6094 6.294731 CCCCAGTTTCTTCCATACTTCTTTTG 60.295 42.308 0.00 0.00 0.00 2.44
5275 6095 5.775195 CCCCAGTTTCTTCCATACTTCTTTT 59.225 40.000 0.00 0.00 0.00 2.27
5276 6096 5.162980 ACCCCAGTTTCTTCCATACTTCTTT 60.163 40.000 0.00 0.00 0.00 2.52
5277 6097 4.354087 ACCCCAGTTTCTTCCATACTTCTT 59.646 41.667 0.00 0.00 0.00 2.52
5278 6098 3.916989 ACCCCAGTTTCTTCCATACTTCT 59.083 43.478 0.00 0.00 0.00 2.85
5279 6099 4.302559 ACCCCAGTTTCTTCCATACTTC 57.697 45.455 0.00 0.00 0.00 3.01
5280 6100 4.741928 AACCCCAGTTTCTTCCATACTT 57.258 40.909 0.00 0.00 29.61 2.24
5281 6101 4.600111 TGTAACCCCAGTTTCTTCCATACT 59.400 41.667 0.00 0.00 37.42 2.12
5282 6102 4.913784 TGTAACCCCAGTTTCTTCCATAC 58.086 43.478 0.00 0.00 37.42 2.39
5283 6103 5.251932 TCATGTAACCCCAGTTTCTTCCATA 59.748 40.000 0.00 0.00 37.42 2.74
5284 6104 4.044065 TCATGTAACCCCAGTTTCTTCCAT 59.956 41.667 0.00 0.00 37.42 3.41
5285 6105 3.396276 TCATGTAACCCCAGTTTCTTCCA 59.604 43.478 0.00 0.00 37.42 3.53
5286 6106 4.028993 TCATGTAACCCCAGTTTCTTCC 57.971 45.455 0.00 0.00 37.42 3.46
5287 6107 6.590234 ATTTCATGTAACCCCAGTTTCTTC 57.410 37.500 0.00 0.00 37.42 2.87
5288 6108 8.664669 ATTATTTCATGTAACCCCAGTTTCTT 57.335 30.769 0.00 0.00 37.42 2.52
5289 6109 9.408648 CTATTATTTCATGTAACCCCAGTTTCT 57.591 33.333 0.00 0.00 37.42 2.52
5290 6110 8.630037 CCTATTATTTCATGTAACCCCAGTTTC 58.370 37.037 0.00 0.00 37.42 2.78
5291 6111 8.119891 ACCTATTATTTCATGTAACCCCAGTTT 58.880 33.333 0.00 0.00 37.42 2.66
5292 6112 7.559897 CACCTATTATTTCATGTAACCCCAGTT 59.440 37.037 0.00 0.00 40.15 3.16
5293 6113 7.060421 CACCTATTATTTCATGTAACCCCAGT 58.940 38.462 0.00 0.00 0.00 4.00
5294 6114 7.287061 TCACCTATTATTTCATGTAACCCCAG 58.713 38.462 0.00 0.00 0.00 4.45
5295 6115 7.214460 TCACCTATTATTTCATGTAACCCCA 57.786 36.000 0.00 0.00 0.00 4.96
5296 6116 7.778382 ACTTCACCTATTATTTCATGTAACCCC 59.222 37.037 0.00 0.00 0.00 4.95
5297 6117 8.747538 ACTTCACCTATTATTTCATGTAACCC 57.252 34.615 0.00 0.00 0.00 4.11
5298 6118 9.391006 TGACTTCACCTATTATTTCATGTAACC 57.609 33.333 0.00 0.00 0.00 2.85
5312 6132 8.960591 CCTGTCAATTTAAATGACTTCACCTAT 58.039 33.333 21.08 0.00 45.81 2.57
5313 6133 7.942341 ACCTGTCAATTTAAATGACTTCACCTA 59.058 33.333 21.08 7.68 45.81 3.08
5314 6134 6.777580 ACCTGTCAATTTAAATGACTTCACCT 59.222 34.615 21.08 0.00 45.81 4.00
5315 6135 6.981722 ACCTGTCAATTTAAATGACTTCACC 58.018 36.000 21.08 5.34 45.81 4.02
5316 6136 7.648142 TGACCTGTCAATTTAAATGACTTCAC 58.352 34.615 21.08 14.50 45.81 3.18
5317 6137 7.040478 CCTGACCTGTCAATTTAAATGACTTCA 60.040 37.037 21.08 18.82 45.81 3.02
5318 6138 7.040409 ACCTGACCTGTCAATTTAAATGACTTC 60.040 37.037 21.08 16.81 45.81 3.01
5319 6139 6.777580 ACCTGACCTGTCAATTTAAATGACTT 59.222 34.615 21.08 11.95 45.81 3.01
5320 6140 6.306987 ACCTGACCTGTCAATTTAAATGACT 58.693 36.000 21.08 9.59 45.81 3.41
5321 6141 6.575162 ACCTGACCTGTCAATTTAAATGAC 57.425 37.500 17.04 17.04 45.82 3.06
5322 6142 7.390440 CACTACCTGACCTGTCAATTTAAATGA 59.610 37.037 0.39 0.00 39.39 2.57
5323 6143 7.174946 ACACTACCTGACCTGTCAATTTAAATG 59.825 37.037 0.39 0.00 39.39 2.32
5324 6144 7.174946 CACACTACCTGACCTGTCAATTTAAAT 59.825 37.037 1.14 0.00 39.39 1.40
5325 6145 6.485313 CACACTACCTGACCTGTCAATTTAAA 59.515 38.462 1.14 0.00 39.39 1.52
5326 6146 5.995282 CACACTACCTGACCTGTCAATTTAA 59.005 40.000 1.14 0.00 39.39 1.52
5327 6147 5.305902 TCACACTACCTGACCTGTCAATTTA 59.694 40.000 1.14 0.00 39.39 1.40
5328 6148 4.102524 TCACACTACCTGACCTGTCAATTT 59.897 41.667 1.14 0.00 39.39 1.82
5329 6149 3.646162 TCACACTACCTGACCTGTCAATT 59.354 43.478 1.14 0.00 39.39 2.32
5330 6150 3.239449 TCACACTACCTGACCTGTCAAT 58.761 45.455 1.14 0.00 39.39 2.57
5331 6151 2.673258 TCACACTACCTGACCTGTCAA 58.327 47.619 1.14 0.00 39.39 3.18
5332 6152 2.375014 TCACACTACCTGACCTGTCA 57.625 50.000 0.00 0.00 38.06 3.58
5333 6153 2.166664 GGATCACACTACCTGACCTGTC 59.833 54.545 0.00 0.00 0.00 3.51
5334 6154 2.180276 GGATCACACTACCTGACCTGT 58.820 52.381 0.00 0.00 0.00 4.00
5335 6155 2.461695 AGGATCACACTACCTGACCTG 58.538 52.381 0.00 0.00 32.39 4.00
5336 6156 2.834549 CAAGGATCACACTACCTGACCT 59.165 50.000 0.00 0.00 34.03 3.85
5337 6157 2.832129 TCAAGGATCACACTACCTGACC 59.168 50.000 0.00 0.00 34.03 4.02
5338 6158 4.220821 TCTTCAAGGATCACACTACCTGAC 59.779 45.833 0.00 0.00 34.03 3.51
5339 6159 4.416516 TCTTCAAGGATCACACTACCTGA 58.583 43.478 0.00 0.00 34.03 3.86
5340 6160 4.808414 TCTTCAAGGATCACACTACCTG 57.192 45.455 0.00 0.00 34.03 4.00
5341 6161 6.380079 AATTCTTCAAGGATCACACTACCT 57.620 37.500 0.00 0.00 35.36 3.08
5342 6162 7.331791 AGTAATTCTTCAAGGATCACACTACC 58.668 38.462 0.00 0.00 0.00 3.18
5343 6163 9.871238 TTAGTAATTCTTCAAGGATCACACTAC 57.129 33.333 0.00 0.00 0.00 2.73
5344 6164 9.871238 GTTAGTAATTCTTCAAGGATCACACTA 57.129 33.333 0.00 0.00 0.00 2.74
5345 6165 7.545965 CGTTAGTAATTCTTCAAGGATCACACT 59.454 37.037 0.00 0.00 0.00 3.55
5346 6166 7.674240 GCGTTAGTAATTCTTCAAGGATCACAC 60.674 40.741 0.00 0.00 0.00 3.82
5347 6167 6.312918 GCGTTAGTAATTCTTCAAGGATCACA 59.687 38.462 0.00 0.00 0.00 3.58
5348 6168 6.312918 TGCGTTAGTAATTCTTCAAGGATCAC 59.687 38.462 0.00 0.00 0.00 3.06
5349 6169 6.403049 TGCGTTAGTAATTCTTCAAGGATCA 58.597 36.000 0.00 0.00 0.00 2.92
5350 6170 6.903883 TGCGTTAGTAATTCTTCAAGGATC 57.096 37.500 0.00 0.00 0.00 3.36
5351 6171 6.093633 GGTTGCGTTAGTAATTCTTCAAGGAT 59.906 38.462 0.00 0.00 0.00 3.24
5352 6172 5.410439 GGTTGCGTTAGTAATTCTTCAAGGA 59.590 40.000 0.00 0.00 0.00 3.36
5353 6173 5.628134 GGTTGCGTTAGTAATTCTTCAAGG 58.372 41.667 0.00 0.00 0.00 3.61
5354 6174 5.313623 CGGTTGCGTTAGTAATTCTTCAAG 58.686 41.667 0.00 0.00 0.00 3.02
5355 6175 4.152759 CCGGTTGCGTTAGTAATTCTTCAA 59.847 41.667 0.00 0.00 0.00 2.69
5356 6176 3.680937 CCGGTTGCGTTAGTAATTCTTCA 59.319 43.478 0.00 0.00 0.00 3.02
5357 6177 3.484721 GCCGGTTGCGTTAGTAATTCTTC 60.485 47.826 1.90 0.00 0.00 2.87
5358 6178 2.417586 GCCGGTTGCGTTAGTAATTCTT 59.582 45.455 1.90 0.00 0.00 2.52
5359 6179 2.004733 GCCGGTTGCGTTAGTAATTCT 58.995 47.619 1.90 0.00 0.00 2.40
5360 6180 2.447089 GCCGGTTGCGTTAGTAATTC 57.553 50.000 1.90 0.00 0.00 2.17
5371 6191 2.032634 TGAATGTCTCGCCGGTTGC 61.033 57.895 1.90 0.00 0.00 4.17
5372 6192 1.635663 GGTGAATGTCTCGCCGGTTG 61.636 60.000 1.90 0.00 44.72 3.77
5373 6193 1.375523 GGTGAATGTCTCGCCGGTT 60.376 57.895 1.90 0.00 44.72 4.44
5374 6194 2.264794 GGTGAATGTCTCGCCGGT 59.735 61.111 1.90 0.00 44.72 5.28
5378 6198 2.086054 AGAACAGGTGAATGTCTCGC 57.914 50.000 0.00 0.00 31.50 5.03
5379 6199 2.738846 CCAAGAACAGGTGAATGTCTCG 59.261 50.000 0.00 0.00 31.50 4.04
5380 6200 3.744660 ACCAAGAACAGGTGAATGTCTC 58.255 45.455 0.00 0.00 38.13 3.36
5381 6201 3.864789 ACCAAGAACAGGTGAATGTCT 57.135 42.857 0.00 0.00 38.13 3.41
5382 6202 4.003648 CCTACCAAGAACAGGTGAATGTC 58.996 47.826 0.00 0.00 40.26 3.06
5383 6203 3.394606 ACCTACCAAGAACAGGTGAATGT 59.605 43.478 0.00 0.00 41.18 2.71
5384 6204 4.021102 ACCTACCAAGAACAGGTGAATG 57.979 45.455 0.00 0.00 41.18 2.67
5385 6205 4.398319 CAACCTACCAAGAACAGGTGAAT 58.602 43.478 0.00 0.00 41.90 2.57
5386 6206 3.434453 CCAACCTACCAAGAACAGGTGAA 60.434 47.826 0.00 0.00 41.90 3.18
5387 6207 2.105821 CCAACCTACCAAGAACAGGTGA 59.894 50.000 0.00 0.00 41.90 4.02
5388 6208 2.504367 CCAACCTACCAAGAACAGGTG 58.496 52.381 0.00 0.00 41.90 4.00
5389 6209 1.423921 CCCAACCTACCAAGAACAGGT 59.576 52.381 0.00 0.00 44.66 4.00
5390 6210 1.702957 TCCCAACCTACCAAGAACAGG 59.297 52.381 0.00 0.00 35.45 4.00
5391 6211 3.721087 ATCCCAACCTACCAAGAACAG 57.279 47.619 0.00 0.00 0.00 3.16
5392 6212 3.245122 GGAATCCCAACCTACCAAGAACA 60.245 47.826 0.00 0.00 0.00 3.18
5393 6213 3.353557 GGAATCCCAACCTACCAAGAAC 58.646 50.000 0.00 0.00 0.00 3.01
5394 6214 2.026636 CGGAATCCCAACCTACCAAGAA 60.027 50.000 0.00 0.00 0.00 2.52
5395 6215 1.557832 CGGAATCCCAACCTACCAAGA 59.442 52.381 0.00 0.00 0.00 3.02
5396 6216 1.408266 CCGGAATCCCAACCTACCAAG 60.408 57.143 0.00 0.00 0.00 3.61
5397 6217 0.621609 CCGGAATCCCAACCTACCAA 59.378 55.000 0.00 0.00 0.00 3.67
5398 6218 1.276140 CCCGGAATCCCAACCTACCA 61.276 60.000 0.73 0.00 0.00 3.25
5399 6219 0.984432 TCCCGGAATCCCAACCTACC 60.984 60.000 0.73 0.00 0.00 3.18
5400 6220 0.468648 CTCCCGGAATCCCAACCTAC 59.531 60.000 0.73 0.00 0.00 3.18
5401 6221 0.043637 ACTCCCGGAATCCCAACCTA 59.956 55.000 0.73 0.00 0.00 3.08
5402 6222 1.229853 ACTCCCGGAATCCCAACCT 60.230 57.895 0.73 0.00 0.00 3.50
5403 6223 1.223763 GACTCCCGGAATCCCAACC 59.776 63.158 0.73 0.00 0.00 3.77
5404 6224 0.618981 AAGACTCCCGGAATCCCAAC 59.381 55.000 0.73 0.00 0.00 3.77
5405 6225 1.004277 CAAAGACTCCCGGAATCCCAA 59.996 52.381 0.73 0.00 0.00 4.12
5406 6226 0.618458 CAAAGACTCCCGGAATCCCA 59.382 55.000 0.73 0.00 0.00 4.37
5407 6227 0.107165 CCAAAGACTCCCGGAATCCC 60.107 60.000 0.73 0.00 0.00 3.85
5408 6228 0.618981 ACCAAAGACTCCCGGAATCC 59.381 55.000 0.73 0.00 0.00 3.01
5409 6229 1.739371 CGACCAAAGACTCCCGGAATC 60.739 57.143 0.73 0.00 0.00 2.52
5410 6230 0.249398 CGACCAAAGACTCCCGGAAT 59.751 55.000 0.73 0.00 0.00 3.01
5411 6231 1.117142 ACGACCAAAGACTCCCGGAA 61.117 55.000 0.73 0.00 0.00 4.30
5412 6232 1.117142 AACGACCAAAGACTCCCGGA 61.117 55.000 0.73 0.00 0.00 5.14
5413 6233 0.949105 CAACGACCAAAGACTCCCGG 60.949 60.000 0.00 0.00 0.00 5.73
5414 6234 0.949105 CCAACGACCAAAGACTCCCG 60.949 60.000 0.00 0.00 0.00 5.14
5415 6235 0.605589 CCCAACGACCAAAGACTCCC 60.606 60.000 0.00 0.00 0.00 4.30
5416 6236 0.605589 CCCCAACGACCAAAGACTCC 60.606 60.000 0.00 0.00 0.00 3.85
5417 6237 1.235281 GCCCCAACGACCAAAGACTC 61.235 60.000 0.00 0.00 0.00 3.36
5418 6238 1.228154 GCCCCAACGACCAAAGACT 60.228 57.895 0.00 0.00 0.00 3.24
5419 6239 0.822121 AAGCCCCAACGACCAAAGAC 60.822 55.000 0.00 0.00 0.00 3.01
5420 6240 0.821711 CAAGCCCCAACGACCAAAGA 60.822 55.000 0.00 0.00 0.00 2.52
5421 6241 1.659794 CAAGCCCCAACGACCAAAG 59.340 57.895 0.00 0.00 0.00 2.77
5422 6242 1.830408 CCAAGCCCCAACGACCAAA 60.830 57.895 0.00 0.00 0.00 3.28
5423 6243 1.706995 TACCAAGCCCCAACGACCAA 61.707 55.000 0.00 0.00 0.00 3.67
5424 6244 1.493854 ATACCAAGCCCCAACGACCA 61.494 55.000 0.00 0.00 0.00 4.02
5425 6245 0.542805 TATACCAAGCCCCAACGACC 59.457 55.000 0.00 0.00 0.00 4.79
5426 6246 2.632987 ATATACCAAGCCCCAACGAC 57.367 50.000 0.00 0.00 0.00 4.34
5427 6247 3.008594 CCATATATACCAAGCCCCAACGA 59.991 47.826 0.00 0.00 0.00 3.85
5428 6248 3.244770 ACCATATATACCAAGCCCCAACG 60.245 47.826 0.00 0.00 0.00 4.10
5429 6249 4.079253 CACCATATATACCAAGCCCCAAC 58.921 47.826 0.00 0.00 0.00 3.77
5430 6250 3.075283 CCACCATATATACCAAGCCCCAA 59.925 47.826 0.00 0.00 0.00 4.12
5431 6251 2.647299 CCACCATATATACCAAGCCCCA 59.353 50.000 0.00 0.00 0.00 4.96
5432 6252 2.620627 GCCACCATATATACCAAGCCCC 60.621 54.545 0.00 0.00 0.00 5.80
5433 6253 2.041081 TGCCACCATATATACCAAGCCC 59.959 50.000 0.00 0.00 0.00 5.19
5434 6254 3.433306 TGCCACCATATATACCAAGCC 57.567 47.619 0.00 0.00 0.00 4.35
5435 6255 3.188460 CGTTGCCACCATATATACCAAGC 59.812 47.826 0.00 0.00 0.00 4.01
5436 6256 4.451096 GTCGTTGCCACCATATATACCAAG 59.549 45.833 0.00 0.00 0.00 3.61
5437 6257 4.382291 GTCGTTGCCACCATATATACCAA 58.618 43.478 0.00 0.00 0.00 3.67
5438 6258 3.553302 CGTCGTTGCCACCATATATACCA 60.553 47.826 0.00 0.00 0.00 3.25
5439 6259 2.991190 CGTCGTTGCCACCATATATACC 59.009 50.000 0.00 0.00 0.00 2.73
5440 6260 3.904571 TCGTCGTTGCCACCATATATAC 58.095 45.455 0.00 0.00 0.00 1.47


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.