Multiple sequence alignment - TraesCS7A01G205800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G205800 chr7A 100.000 3353 0 0 1 3353 167946278 167942926 0.000000e+00 6192.0
1 TraesCS7A01G205800 chr7A 85.161 1651 206 27 719 2359 65543322 65544943 0.000000e+00 1655.0
2 TraesCS7A01G205800 chr7A 83.670 545 82 5 1632 2175 65151306 65151844 1.070000e-139 507.0
3 TraesCS7A01G205800 chr7A 98.544 206 3 0 1 206 167951476 167951271 6.840000e-97 364.0
4 TraesCS7A01G205800 chr7A 98.068 207 3 1 1 207 845163 845368 3.180000e-95 359.0
5 TraesCS7A01G205800 chr7A 97.087 206 6 0 1 206 839993 840198 6.890000e-92 348.0
6 TraesCS7A01G205800 chr7A 80.303 198 32 5 2591 2787 722885393 722885202 3.490000e-30 143.0
7 TraesCS7A01G205800 chr7A 97.368 38 1 0 2101 2138 65151843 65151880 7.770000e-07 65.8
8 TraesCS7A01G205800 chr7B 94.821 2761 131 7 426 3181 130817440 130814687 0.000000e+00 4296.0
9 TraesCS7A01G205800 chr7B 83.797 1654 219 26 718 2359 3504167 3505783 0.000000e+00 1524.0
10 TraesCS7A01G205800 chr7B 86.264 182 16 4 244 420 130841465 130841288 4.420000e-44 189.0
11 TraesCS7A01G205800 chr7D 94.640 1138 59 2 1364 2501 166820346 166819211 0.000000e+00 1762.0
12 TraesCS7A01G205800 chr7D 84.649 1596 204 27 774 2359 61187172 61188736 0.000000e+00 1552.0
13 TraesCS7A01G205800 chr7D 82.657 1084 149 25 774 1847 61179640 61180694 0.000000e+00 924.0
14 TraesCS7A01G205800 chr7D 89.583 480 38 8 383 856 166876815 166876342 1.720000e-167 599.0
15 TraesCS7A01G205800 chr7D 88.018 434 39 4 932 1364 166875582 166875161 4.990000e-138 501.0
16 TraesCS7A01G205800 chr4B 94.203 207 7 2 2 206 605560508 605560711 9.030000e-81 311.0
17 TraesCS7A01G205800 chr4B 93.427 213 8 3 2 212 605565689 605565897 9.030000e-81 311.0
18 TraesCS7A01G205800 chr4B 97.368 38 1 0 206 243 530198773 530198810 7.770000e-07 65.8
19 TraesCS7A01G205800 chr6D 93.750 208 8 2 3 208 446057249 446057045 1.170000e-79 307.0
20 TraesCS7A01G205800 chr6D 93.720 207 8 2 2 206 446062580 446062377 4.200000e-79 305.0
21 TraesCS7A01G205800 chr6D 73.659 615 152 10 1718 2327 429018150 429018759 2.600000e-56 230.0
22 TraesCS7A01G205800 chr5A 85.377 212 17 8 2 206 701905337 701905133 1.220000e-49 207.0
23 TraesCS7A01G205800 chr3A 85.308 211 17 8 3 206 742266699 742266902 4.390000e-49 206.0
24 TraesCS7A01G205800 chr3A 97.222 36 0 1 206 241 399132239 399132273 3.610000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G205800 chr7A 167942926 167946278 3352 True 6192.0 6192 100.0000 1 3353 1 chr7A.!!$R1 3352
1 TraesCS7A01G205800 chr7A 65543322 65544943 1621 False 1655.0 1655 85.1610 719 2359 1 chr7A.!!$F3 1640
2 TraesCS7A01G205800 chr7A 65151306 65151880 574 False 286.4 507 90.5190 1632 2175 2 chr7A.!!$F4 543
3 TraesCS7A01G205800 chr7B 130814687 130817440 2753 True 4296.0 4296 94.8210 426 3181 1 chr7B.!!$R1 2755
4 TraesCS7A01G205800 chr7B 3504167 3505783 1616 False 1524.0 1524 83.7970 718 2359 1 chr7B.!!$F1 1641
5 TraesCS7A01G205800 chr7D 166819211 166820346 1135 True 1762.0 1762 94.6400 1364 2501 1 chr7D.!!$R1 1137
6 TraesCS7A01G205800 chr7D 61187172 61188736 1564 False 1552.0 1552 84.6490 774 2359 1 chr7D.!!$F2 1585
7 TraesCS7A01G205800 chr7D 61179640 61180694 1054 False 924.0 924 82.6570 774 1847 1 chr7D.!!$F1 1073
8 TraesCS7A01G205800 chr7D 166875161 166876815 1654 True 550.0 599 88.8005 383 1364 2 chr7D.!!$R2 981
9 TraesCS7A01G205800 chr6D 429018150 429018759 609 False 230.0 230 73.6590 1718 2327 1 chr6D.!!$F1 609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
99 100 0.037232 CCGAGCTCTTTTCCGTTCCT 60.037 55.0 12.85 0.0 0.00 3.36 F
287 288 0.107508 CTGATGCGACAATCCCCACT 60.108 55.0 0.00 0.0 0.00 4.00 F
1098 1813 0.179070 TTCTGTGCGTTACCACTGCA 60.179 50.0 5.78 0.0 36.68 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1120 1838 0.318445 AGATATACGGTGCGCGAACC 60.318 55.0 27.41 27.41 36.82 3.62 R
1228 1946 0.458197 TGGTTGTCGTCGTCGTTGTT 60.458 50.0 1.33 0.00 38.33 2.83 R
2502 3225 0.811281 CAAATTCTTGGAGACGGCCC 59.189 55.0 0.00 0.00 0.00 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.027161 CCGAATTTTGGTGTAAATCAACTAGG 58.973 38.462 0.00 0.00 34.34 3.02
26 27 7.094549 CCGAATTTTGGTGTAAATCAACTAGGA 60.095 37.037 0.00 0.00 34.34 2.94
27 28 8.458843 CGAATTTTGGTGTAAATCAACTAGGAT 58.541 33.333 0.00 0.00 34.34 3.24
30 31 9.927668 ATTTTGGTGTAAATCAACTAGGATTTG 57.072 29.630 13.98 2.14 44.77 2.32
31 32 8.698973 TTTGGTGTAAATCAACTAGGATTTGA 57.301 30.769 13.98 6.90 44.77 2.69
32 33 8.877864 TTGGTGTAAATCAACTAGGATTTGAT 57.122 30.769 13.98 8.60 44.77 2.57
33 34 9.967451 TTGGTGTAAATCAACTAGGATTTGATA 57.033 29.630 13.98 0.00 44.77 2.15
34 35 9.613428 TGGTGTAAATCAACTAGGATTTGATAG 57.387 33.333 13.98 0.00 44.77 2.08
35 36 9.614792 GGTGTAAATCAACTAGGATTTGATAGT 57.385 33.333 13.98 6.58 44.77 2.12
37 38 9.613428 TGTAAATCAACTAGGATTTGATAGTGG 57.387 33.333 13.98 0.00 44.77 4.00
38 39 9.832445 GTAAATCAACTAGGATTTGATAGTGGA 57.168 33.333 13.98 0.00 44.77 4.02
41 42 9.927081 AATCAACTAGGATTTGATAGTGGATTT 57.073 29.630 8.51 0.00 44.67 2.17
42 43 8.737168 TCAACTAGGATTTGATAGTGGATTTG 57.263 34.615 0.00 0.00 32.62 2.32
43 44 8.548025 TCAACTAGGATTTGATAGTGGATTTGA 58.452 33.333 0.00 0.00 32.62 2.69
44 45 8.834465 CAACTAGGATTTGATAGTGGATTTGAG 58.166 37.037 0.00 0.00 32.62 3.02
45 46 8.324191 ACTAGGATTTGATAGTGGATTTGAGA 57.676 34.615 0.00 0.00 31.09 3.27
46 47 8.428063 ACTAGGATTTGATAGTGGATTTGAGAG 58.572 37.037 0.00 0.00 31.09 3.20
47 48 6.599445 AGGATTTGATAGTGGATTTGAGAGG 58.401 40.000 0.00 0.00 0.00 3.69
48 49 6.388100 AGGATTTGATAGTGGATTTGAGAGGA 59.612 38.462 0.00 0.00 0.00 3.71
49 50 6.709846 GGATTTGATAGTGGATTTGAGAGGAG 59.290 42.308 0.00 0.00 0.00 3.69
50 51 6.627087 TTTGATAGTGGATTTGAGAGGAGT 57.373 37.500 0.00 0.00 0.00 3.85
51 52 6.627087 TTGATAGTGGATTTGAGAGGAGTT 57.373 37.500 0.00 0.00 0.00 3.01
52 53 6.627087 TGATAGTGGATTTGAGAGGAGTTT 57.373 37.500 0.00 0.00 0.00 2.66
53 54 7.733773 TGATAGTGGATTTGAGAGGAGTTTA 57.266 36.000 0.00 0.00 0.00 2.01
54 55 7.556844 TGATAGTGGATTTGAGAGGAGTTTAC 58.443 38.462 0.00 0.00 0.00 2.01
55 56 5.825593 AGTGGATTTGAGAGGAGTTTACA 57.174 39.130 0.00 0.00 0.00 2.41
56 57 5.552178 AGTGGATTTGAGAGGAGTTTACAC 58.448 41.667 0.00 0.00 0.00 2.90
57 58 5.071788 AGTGGATTTGAGAGGAGTTTACACA 59.928 40.000 0.00 0.00 0.00 3.72
58 59 5.940470 GTGGATTTGAGAGGAGTTTACACAT 59.060 40.000 0.00 0.00 0.00 3.21
59 60 6.092807 GTGGATTTGAGAGGAGTTTACACATC 59.907 42.308 0.00 0.00 0.00 3.06
60 61 6.173339 GGATTTGAGAGGAGTTTACACATCA 58.827 40.000 0.00 0.00 0.00 3.07
61 62 6.314896 GGATTTGAGAGGAGTTTACACATCAG 59.685 42.308 0.00 0.00 0.00 2.90
62 63 6.419484 TTTGAGAGGAGTTTACACATCAGA 57.581 37.500 0.00 0.00 0.00 3.27
63 64 6.419484 TTGAGAGGAGTTTACACATCAGAA 57.581 37.500 0.00 0.00 0.00 3.02
64 65 5.784177 TGAGAGGAGTTTACACATCAGAAC 58.216 41.667 0.00 0.00 0.00 3.01
65 66 5.540337 TGAGAGGAGTTTACACATCAGAACT 59.460 40.000 0.00 0.00 35.22 3.01
66 67 5.788450 AGAGGAGTTTACACATCAGAACTG 58.212 41.667 0.00 0.00 32.85 3.16
67 68 4.899502 AGGAGTTTACACATCAGAACTGG 58.100 43.478 1.93 0.00 32.85 4.00
68 69 4.593206 AGGAGTTTACACATCAGAACTGGA 59.407 41.667 1.93 0.00 32.85 3.86
69 70 4.932200 GGAGTTTACACATCAGAACTGGAG 59.068 45.833 1.93 0.00 32.85 3.86
70 71 4.319177 AGTTTACACATCAGAACTGGAGC 58.681 43.478 1.93 0.00 31.59 4.70
71 72 3.334583 TTACACATCAGAACTGGAGCC 57.665 47.619 1.93 0.00 0.00 4.70
72 73 0.326264 ACACATCAGAACTGGAGCCC 59.674 55.000 1.93 0.00 0.00 5.19
73 74 0.393537 CACATCAGAACTGGAGCCCC 60.394 60.000 1.93 0.00 0.00 5.80
74 75 0.548682 ACATCAGAACTGGAGCCCCT 60.549 55.000 1.93 0.00 0.00 4.79
75 76 0.107312 CATCAGAACTGGAGCCCCTG 60.107 60.000 1.93 0.00 37.41 4.45
76 77 1.919600 ATCAGAACTGGAGCCCCTGC 61.920 60.000 1.93 0.00 35.04 4.85
77 78 2.530151 AGAACTGGAGCCCCTGCA 60.530 61.111 0.00 0.00 41.13 4.41
78 79 1.927527 AGAACTGGAGCCCCTGCAT 60.928 57.895 0.00 0.00 41.13 3.96
79 80 1.452833 GAACTGGAGCCCCTGCATC 60.453 63.158 0.00 0.00 41.13 3.91
80 81 2.900671 GAACTGGAGCCCCTGCATCC 62.901 65.000 0.00 0.00 41.13 3.51
81 82 4.201122 CTGGAGCCCCTGCATCCC 62.201 72.222 0.88 0.00 41.13 3.85
84 85 4.247380 GAGCCCCTGCATCCCGAG 62.247 72.222 0.00 0.00 41.13 4.63
87 88 4.247380 CCCCTGCATCCCGAGCTC 62.247 72.222 2.73 2.73 0.00 4.09
88 89 3.160047 CCCTGCATCCCGAGCTCT 61.160 66.667 12.85 0.00 0.00 4.09
89 90 2.739996 CCCTGCATCCCGAGCTCTT 61.740 63.158 12.85 0.00 0.00 2.85
90 91 1.222936 CCTGCATCCCGAGCTCTTT 59.777 57.895 12.85 0.00 0.00 2.52
91 92 0.393537 CCTGCATCCCGAGCTCTTTT 60.394 55.000 12.85 0.00 0.00 2.27
92 93 1.012841 CTGCATCCCGAGCTCTTTTC 58.987 55.000 12.85 0.00 0.00 2.29
93 94 0.392998 TGCATCCCGAGCTCTTTTCC 60.393 55.000 12.85 0.00 0.00 3.13
94 95 1.432270 GCATCCCGAGCTCTTTTCCG 61.432 60.000 12.85 0.00 0.00 4.30
95 96 0.108138 CATCCCGAGCTCTTTTCCGT 60.108 55.000 12.85 0.00 0.00 4.69
96 97 0.613777 ATCCCGAGCTCTTTTCCGTT 59.386 50.000 12.85 0.00 0.00 4.44
97 98 0.037605 TCCCGAGCTCTTTTCCGTTC 60.038 55.000 12.85 0.00 0.00 3.95
98 99 1.019805 CCCGAGCTCTTTTCCGTTCC 61.020 60.000 12.85 0.00 0.00 3.62
99 100 0.037232 CCGAGCTCTTTTCCGTTCCT 60.037 55.000 12.85 0.00 0.00 3.36
100 101 1.608283 CCGAGCTCTTTTCCGTTCCTT 60.608 52.381 12.85 0.00 0.00 3.36
101 102 2.143925 CGAGCTCTTTTCCGTTCCTTT 58.856 47.619 12.85 0.00 0.00 3.11
102 103 2.157863 CGAGCTCTTTTCCGTTCCTTTC 59.842 50.000 12.85 0.00 0.00 2.62
103 104 2.484651 GAGCTCTTTTCCGTTCCTTTCC 59.515 50.000 6.43 0.00 0.00 3.13
104 105 2.106684 AGCTCTTTTCCGTTCCTTTCCT 59.893 45.455 0.00 0.00 0.00 3.36
105 106 2.885266 GCTCTTTTCCGTTCCTTTCCTT 59.115 45.455 0.00 0.00 0.00 3.36
106 107 4.070009 GCTCTTTTCCGTTCCTTTCCTTA 58.930 43.478 0.00 0.00 0.00 2.69
107 108 4.700692 GCTCTTTTCCGTTCCTTTCCTTAT 59.299 41.667 0.00 0.00 0.00 1.73
108 109 5.163744 GCTCTTTTCCGTTCCTTTCCTTATC 60.164 44.000 0.00 0.00 0.00 1.75
109 110 6.123045 TCTTTTCCGTTCCTTTCCTTATCT 57.877 37.500 0.00 0.00 0.00 1.98
110 111 6.171213 TCTTTTCCGTTCCTTTCCTTATCTC 58.829 40.000 0.00 0.00 0.00 2.75
111 112 5.757099 TTTCCGTTCCTTTCCTTATCTCT 57.243 39.130 0.00 0.00 0.00 3.10
112 113 6.862469 TTTCCGTTCCTTTCCTTATCTCTA 57.138 37.500 0.00 0.00 0.00 2.43
113 114 7.433537 TTTCCGTTCCTTTCCTTATCTCTAT 57.566 36.000 0.00 0.00 0.00 1.98
114 115 6.651975 TCCGTTCCTTTCCTTATCTCTATC 57.348 41.667 0.00 0.00 0.00 2.08
115 116 6.374588 TCCGTTCCTTTCCTTATCTCTATCT 58.625 40.000 0.00 0.00 0.00 1.98
116 117 6.839657 TCCGTTCCTTTCCTTATCTCTATCTT 59.160 38.462 0.00 0.00 0.00 2.40
117 118 7.014422 TCCGTTCCTTTCCTTATCTCTATCTTC 59.986 40.741 0.00 0.00 0.00 2.87
118 119 7.149307 CGTTCCTTTCCTTATCTCTATCTTCC 58.851 42.308 0.00 0.00 0.00 3.46
119 120 7.014808 CGTTCCTTTCCTTATCTCTATCTTCCT 59.985 40.741 0.00 0.00 0.00 3.36
120 121 8.364894 GTTCCTTTCCTTATCTCTATCTTCCTC 58.635 40.741 0.00 0.00 0.00 3.71
121 122 7.831955 TCCTTTCCTTATCTCTATCTTCCTCT 58.168 38.462 0.00 0.00 0.00 3.69
122 123 8.293216 TCCTTTCCTTATCTCTATCTTCCTCTT 58.707 37.037 0.00 0.00 0.00 2.85
123 124 8.933653 CCTTTCCTTATCTCTATCTTCCTCTTT 58.066 37.037 0.00 0.00 0.00 2.52
126 127 9.937876 TTCCTTATCTCTATCTTCCTCTTTACA 57.062 33.333 0.00 0.00 0.00 2.41
127 128 9.357161 TCCTTATCTCTATCTTCCTCTTTACAC 57.643 37.037 0.00 0.00 0.00 2.90
128 129 9.362151 CCTTATCTCTATCTTCCTCTTTACACT 57.638 37.037 0.00 0.00 0.00 3.55
132 133 8.287439 TCTCTATCTTCCTCTTTACACTCTTG 57.713 38.462 0.00 0.00 0.00 3.02
133 134 7.891183 TCTCTATCTTCCTCTTTACACTCTTGT 59.109 37.037 0.00 0.00 40.02 3.16
134 135 8.057536 TCTATCTTCCTCTTTACACTCTTGTC 57.942 38.462 0.00 0.00 37.15 3.18
135 136 5.470047 TCTTCCTCTTTACACTCTTGTCC 57.530 43.478 0.00 0.00 37.15 4.02
136 137 5.148502 TCTTCCTCTTTACACTCTTGTCCT 58.851 41.667 0.00 0.00 37.15 3.85
137 138 5.244178 TCTTCCTCTTTACACTCTTGTCCTC 59.756 44.000 0.00 0.00 37.15 3.71
138 139 3.833070 TCCTCTTTACACTCTTGTCCTCC 59.167 47.826 0.00 0.00 37.15 4.30
139 140 3.835395 CCTCTTTACACTCTTGTCCTCCT 59.165 47.826 0.00 0.00 37.15 3.69
140 141 4.322349 CCTCTTTACACTCTTGTCCTCCTG 60.322 50.000 0.00 0.00 37.15 3.86
141 142 4.480115 TCTTTACACTCTTGTCCTCCTGA 58.520 43.478 0.00 0.00 37.15 3.86
142 143 4.281182 TCTTTACACTCTTGTCCTCCTGAC 59.719 45.833 0.00 0.00 44.72 3.51
158 159 9.614792 GTCCTCCTGACATTTATAATTTACACT 57.385 33.333 0.00 0.00 43.85 3.55
176 177 8.726870 TTTACACTTTAGTACATAATCCTGCC 57.273 34.615 0.00 0.00 0.00 4.85
177 178 6.308015 ACACTTTAGTACATAATCCTGCCA 57.692 37.500 0.00 0.00 0.00 4.92
178 179 6.717289 ACACTTTAGTACATAATCCTGCCAA 58.283 36.000 0.00 0.00 0.00 4.52
179 180 7.172342 ACACTTTAGTACATAATCCTGCCAAA 58.828 34.615 0.00 0.00 0.00 3.28
180 181 7.834181 ACACTTTAGTACATAATCCTGCCAAAT 59.166 33.333 0.00 0.00 0.00 2.32
181 182 9.337396 CACTTTAGTACATAATCCTGCCAAATA 57.663 33.333 0.00 0.00 0.00 1.40
182 183 9.338622 ACTTTAGTACATAATCCTGCCAAATAC 57.661 33.333 0.00 0.00 0.00 1.89
183 184 9.337396 CTTTAGTACATAATCCTGCCAAATACA 57.663 33.333 0.00 0.00 0.00 2.29
184 185 9.688091 TTTAGTACATAATCCTGCCAAATACAA 57.312 29.630 0.00 0.00 0.00 2.41
185 186 9.688091 TTAGTACATAATCCTGCCAAATACAAA 57.312 29.630 0.00 0.00 0.00 2.83
186 187 8.766994 AGTACATAATCCTGCCAAATACAAAT 57.233 30.769 0.00 0.00 0.00 2.32
187 188 9.200817 AGTACATAATCCTGCCAAATACAAATT 57.799 29.630 0.00 0.00 0.00 1.82
188 189 9.816354 GTACATAATCCTGCCAAATACAAATTT 57.184 29.630 0.00 0.00 35.65 1.82
190 191 9.816354 ACATAATCCTGCCAAATACAAATTTAC 57.184 29.630 0.00 0.00 33.45 2.01
191 192 9.814899 CATAATCCTGCCAAATACAAATTTACA 57.185 29.630 0.00 0.00 33.45 2.41
192 193 9.816354 ATAATCCTGCCAAATACAAATTTACAC 57.184 29.630 0.00 0.00 33.45 2.90
193 194 6.031751 TCCTGCCAAATACAAATTTACACC 57.968 37.500 0.00 0.00 33.45 4.16
194 195 5.777732 TCCTGCCAAATACAAATTTACACCT 59.222 36.000 0.00 0.00 33.45 4.00
195 196 6.948886 TCCTGCCAAATACAAATTTACACCTA 59.051 34.615 0.00 0.00 33.45 3.08
196 197 7.451877 TCCTGCCAAATACAAATTTACACCTAA 59.548 33.333 0.00 0.00 33.45 2.69
197 198 8.091449 CCTGCCAAATACAAATTTACACCTAAA 58.909 33.333 0.00 0.00 33.45 1.85
198 199 8.819643 TGCCAAATACAAATTTACACCTAAAC 57.180 30.769 0.00 0.00 33.45 2.01
199 200 8.643324 TGCCAAATACAAATTTACACCTAAACT 58.357 29.630 0.00 0.00 33.45 2.66
200 201 9.135843 GCCAAATACAAATTTACACCTAAACTC 57.864 33.333 0.00 0.00 33.45 3.01
206 207 8.057536 ACAAATTTACACCTAAACTCAACACA 57.942 30.769 0.00 0.00 0.00 3.72
207 208 8.691797 ACAAATTTACACCTAAACTCAACACAT 58.308 29.630 0.00 0.00 0.00 3.21
208 209 9.528018 CAAATTTACACCTAAACTCAACACATT 57.472 29.630 0.00 0.00 0.00 2.71
209 210 9.528018 AAATTTACACCTAAACTCAACACATTG 57.472 29.630 0.00 0.00 37.14 2.82
210 211 4.568152 ACACCTAAACTCAACACATTGC 57.432 40.909 0.00 0.00 35.63 3.56
211 212 3.951037 ACACCTAAACTCAACACATTGCA 59.049 39.130 0.00 0.00 35.63 4.08
212 213 4.584325 ACACCTAAACTCAACACATTGCAT 59.416 37.500 0.00 0.00 35.63 3.96
213 214 5.767665 ACACCTAAACTCAACACATTGCATA 59.232 36.000 0.00 0.00 35.63 3.14
214 215 6.434028 ACACCTAAACTCAACACATTGCATAT 59.566 34.615 0.00 0.00 35.63 1.78
215 216 6.968904 CACCTAAACTCAACACATTGCATATC 59.031 38.462 0.00 0.00 35.63 1.63
216 217 6.095440 ACCTAAACTCAACACATTGCATATCC 59.905 38.462 0.00 0.00 35.63 2.59
217 218 6.319658 CCTAAACTCAACACATTGCATATCCT 59.680 38.462 0.00 0.00 35.63 3.24
218 219 6.594788 AAACTCAACACATTGCATATCCTT 57.405 33.333 0.00 0.00 35.63 3.36
219 220 5.571784 ACTCAACACATTGCATATCCTTG 57.428 39.130 0.00 0.00 35.63 3.61
220 221 4.142315 ACTCAACACATTGCATATCCTTGC 60.142 41.667 0.00 0.00 43.07 4.01
231 232 3.376546 GCATATCCTTGCATTAGCCTAGC 59.623 47.826 0.00 0.00 42.31 3.42
232 233 4.841422 CATATCCTTGCATTAGCCTAGCT 58.159 43.478 0.00 0.00 43.41 3.32
233 234 2.918712 TCCTTGCATTAGCCTAGCTC 57.081 50.000 0.00 0.00 40.44 4.09
234 235 1.417890 TCCTTGCATTAGCCTAGCTCC 59.582 52.381 0.00 0.00 40.44 4.70
235 236 1.506493 CTTGCATTAGCCTAGCTCCG 58.494 55.000 0.00 0.00 40.44 4.63
236 237 0.830648 TTGCATTAGCCTAGCTCCGT 59.169 50.000 0.00 0.00 40.44 4.69
237 238 0.389391 TGCATTAGCCTAGCTCCGTC 59.611 55.000 0.00 0.00 40.44 4.79
238 239 0.319986 GCATTAGCCTAGCTCCGTCC 60.320 60.000 0.00 0.00 40.44 4.79
239 240 0.318762 CATTAGCCTAGCTCCGTCCC 59.681 60.000 0.00 0.00 40.44 4.46
240 241 0.188834 ATTAGCCTAGCTCCGTCCCT 59.811 55.000 0.00 0.00 40.44 4.20
241 242 0.755698 TTAGCCTAGCTCCGTCCCTG 60.756 60.000 0.00 0.00 40.44 4.45
242 243 4.228567 GCCTAGCTCCGTCCCTGC 62.229 72.222 0.00 0.00 0.00 4.85
243 244 3.541713 CCTAGCTCCGTCCCTGCC 61.542 72.222 0.00 0.00 0.00 4.85
244 245 2.443016 CTAGCTCCGTCCCTGCCT 60.443 66.667 0.00 0.00 0.00 4.75
245 246 2.442272 TAGCTCCGTCCCTGCCTC 60.442 66.667 0.00 0.00 0.00 4.70
248 249 3.465403 CTCCGTCCCTGCCTCCTG 61.465 72.222 0.00 0.00 0.00 3.86
251 252 3.775654 CGTCCCTGCCTCCTGGTC 61.776 72.222 0.00 0.00 35.27 4.02
252 253 2.607750 GTCCCTGCCTCCTGGTCA 60.608 66.667 0.00 0.00 35.27 4.02
253 254 2.607750 TCCCTGCCTCCTGGTCAC 60.608 66.667 0.00 0.00 35.27 3.67
254 255 2.930019 CCCTGCCTCCTGGTCACA 60.930 66.667 0.00 0.00 35.27 3.58
255 256 2.667418 CCTGCCTCCTGGTCACAG 59.333 66.667 0.00 0.00 44.51 3.66
260 261 1.986413 CCTCCTGGTCACAGAAGGG 59.014 63.158 0.00 0.00 44.90 3.95
261 262 2.190488 CCTCCTGGTCACAGAAGGGC 62.190 65.000 0.00 0.00 44.90 5.19
265 266 1.228245 TGGTCACAGAAGGGCAAGC 60.228 57.895 0.00 0.00 0.00 4.01
266 267 2.328099 GGTCACAGAAGGGCAAGCG 61.328 63.158 0.00 0.00 0.00 4.68
267 268 2.032528 TCACAGAAGGGCAAGCGG 59.967 61.111 0.00 0.00 0.00 5.52
268 269 3.741476 CACAGAAGGGCAAGCGGC 61.741 66.667 0.00 0.00 43.74 6.53
269 270 3.958860 ACAGAAGGGCAAGCGGCT 61.959 61.111 0.00 0.00 44.01 5.52
270 271 3.437795 CAGAAGGGCAAGCGGCTG 61.438 66.667 1.81 0.00 44.01 4.85
271 272 3.640407 AGAAGGGCAAGCGGCTGA 61.640 61.111 1.81 0.00 44.01 4.26
272 273 2.439156 GAAGGGCAAGCGGCTGAT 60.439 61.111 1.81 0.00 44.01 2.90
273 274 2.753043 AAGGGCAAGCGGCTGATG 60.753 61.111 1.81 0.00 44.01 3.07
277 278 4.527157 GCAAGCGGCTGATGCGAC 62.527 66.667 10.57 0.00 40.82 5.19
278 279 3.120385 CAAGCGGCTGATGCGACA 61.120 61.111 1.81 0.00 40.82 4.35
279 280 2.358615 AAGCGGCTGATGCGACAA 60.359 55.556 1.81 0.00 40.82 3.18
280 281 1.746615 AAGCGGCTGATGCGACAAT 60.747 52.632 1.81 0.00 40.82 2.71
281 282 1.709147 AAGCGGCTGATGCGACAATC 61.709 55.000 1.81 0.00 40.82 2.67
282 283 3.017323 CGGCTGATGCGACAATCC 58.983 61.111 0.00 0.00 40.82 3.01
283 284 2.537560 CGGCTGATGCGACAATCCC 61.538 63.158 0.00 0.00 40.82 3.85
284 285 2.189499 GGCTGATGCGACAATCCCC 61.189 63.158 0.00 0.00 40.82 4.81
285 286 1.451927 GCTGATGCGACAATCCCCA 60.452 57.895 0.00 0.00 0.00 4.96
286 287 1.718757 GCTGATGCGACAATCCCCAC 61.719 60.000 0.00 0.00 0.00 4.61
287 288 0.107508 CTGATGCGACAATCCCCACT 60.108 55.000 0.00 0.00 0.00 4.00
288 289 0.327924 TGATGCGACAATCCCCACTT 59.672 50.000 0.00 0.00 0.00 3.16
289 290 0.734889 GATGCGACAATCCCCACTTG 59.265 55.000 0.00 0.00 0.00 3.16
290 291 0.680921 ATGCGACAATCCCCACTTGG 60.681 55.000 0.00 0.00 0.00 3.61
291 292 2.700773 GCGACAATCCCCACTTGGC 61.701 63.158 0.00 0.00 0.00 4.52
292 293 2.046285 CGACAATCCCCACTTGGCC 61.046 63.158 0.00 0.00 0.00 5.36
293 294 1.076549 GACAATCCCCACTTGGCCA 59.923 57.895 0.00 0.00 0.00 5.36
294 295 0.967380 GACAATCCCCACTTGGCCAG 60.967 60.000 5.11 2.72 0.00 4.85
295 296 2.037847 AATCCCCACTTGGCCAGC 59.962 61.111 5.11 0.00 0.00 4.85
296 297 2.551413 AATCCCCACTTGGCCAGCT 61.551 57.895 5.11 0.00 0.00 4.24
297 298 2.097978 AATCCCCACTTGGCCAGCTT 62.098 55.000 5.11 0.00 0.00 3.74
298 299 2.505364 ATCCCCACTTGGCCAGCTTC 62.505 60.000 5.11 0.00 0.00 3.86
299 300 2.437897 CCCACTTGGCCAGCTTCT 59.562 61.111 5.11 0.00 0.00 2.85
300 301 1.676967 CCCACTTGGCCAGCTTCTC 60.677 63.158 5.11 0.00 0.00 2.87
301 302 1.676967 CCACTTGGCCAGCTTCTCC 60.677 63.158 5.11 0.00 0.00 3.71
302 303 2.037136 CACTTGGCCAGCTTCTCCG 61.037 63.158 5.11 0.00 0.00 4.63
303 304 2.217038 ACTTGGCCAGCTTCTCCGA 61.217 57.895 5.11 0.00 0.00 4.55
304 305 1.743252 CTTGGCCAGCTTCTCCGAC 60.743 63.158 5.11 0.00 0.00 4.79
305 306 3.589654 TTGGCCAGCTTCTCCGACG 62.590 63.158 5.11 0.00 0.00 5.12
306 307 4.070552 GGCCAGCTTCTCCGACGT 62.071 66.667 0.00 0.00 0.00 4.34
307 308 2.507324 GCCAGCTTCTCCGACGTC 60.507 66.667 5.18 5.18 0.00 4.34
308 309 2.182030 CCAGCTTCTCCGACGTCC 59.818 66.667 10.58 0.00 0.00 4.79
309 310 2.636412 CCAGCTTCTCCGACGTCCA 61.636 63.158 10.58 0.00 0.00 4.02
310 311 1.289066 CAGCTTCTCCGACGTCCAA 59.711 57.895 10.58 0.00 0.00 3.53
311 312 1.009389 CAGCTTCTCCGACGTCCAAC 61.009 60.000 10.58 0.00 0.00 3.77
321 322 3.411351 CGTCCAACGCCCGTTCAG 61.411 66.667 2.68 0.00 36.00 3.02
322 323 2.029964 GTCCAACGCCCGTTCAGA 59.970 61.111 2.68 1.27 36.00 3.27
323 324 1.595929 GTCCAACGCCCGTTCAGAA 60.596 57.895 2.68 0.00 36.00 3.02
324 325 1.146485 TCCAACGCCCGTTCAGAAA 59.854 52.632 2.68 0.00 36.00 2.52
325 326 0.882927 TCCAACGCCCGTTCAGAAAG 60.883 55.000 2.68 0.00 36.00 2.62
326 327 1.574428 CAACGCCCGTTCAGAAAGG 59.426 57.895 8.12 8.12 36.00 3.11
327 328 2.258726 AACGCCCGTTCAGAAAGGC 61.259 57.895 9.54 11.73 42.18 4.35
329 330 2.358247 GCCCGTTCAGAAAGGCGA 60.358 61.111 9.54 0.00 35.30 5.54
330 331 2.391389 GCCCGTTCAGAAAGGCGAG 61.391 63.158 9.54 0.00 35.30 5.03
331 332 2.391389 CCCGTTCAGAAAGGCGAGC 61.391 63.158 9.54 0.00 0.00 5.03
332 333 2.391389 CCGTTCAGAAAGGCGAGCC 61.391 63.158 5.89 5.89 0.00 4.70
333 334 1.667830 CGTTCAGAAAGGCGAGCCA 60.668 57.895 17.18 0.00 38.92 4.75
334 335 1.021390 CGTTCAGAAAGGCGAGCCAT 61.021 55.000 17.18 0.50 38.92 4.40
335 336 0.449388 GTTCAGAAAGGCGAGCCATG 59.551 55.000 17.18 9.22 38.92 3.66
336 337 1.308069 TTCAGAAAGGCGAGCCATGC 61.308 55.000 17.18 2.62 38.92 4.06
337 338 2.042259 CAGAAAGGCGAGCCATGCA 61.042 57.895 17.18 0.00 38.92 3.96
338 339 1.303561 AGAAAGGCGAGCCATGCAA 60.304 52.632 17.18 0.00 38.92 4.08
339 340 0.895100 AGAAAGGCGAGCCATGCAAA 60.895 50.000 17.18 0.00 38.92 3.68
340 341 0.457337 GAAAGGCGAGCCATGCAAAG 60.457 55.000 17.18 0.00 38.92 2.77
341 342 0.895100 AAAGGCGAGCCATGCAAAGA 60.895 50.000 17.18 0.00 38.92 2.52
342 343 0.895100 AAGGCGAGCCATGCAAAGAA 60.895 50.000 17.18 0.00 38.92 2.52
343 344 1.153958 GGCGAGCCATGCAAAGAAC 60.154 57.895 9.58 0.00 35.81 3.01
344 345 1.589716 GGCGAGCCATGCAAAGAACT 61.590 55.000 9.58 0.00 35.81 3.01
345 346 0.242017 GCGAGCCATGCAAAGAACTT 59.758 50.000 0.00 0.00 0.00 2.66
346 347 1.973138 CGAGCCATGCAAAGAACTTG 58.027 50.000 0.00 0.00 38.15 3.16
354 355 3.639162 CAAAGAACTTGCACCGCAA 57.361 47.368 0.92 0.92 46.80 4.85
361 362 2.203084 TTGCACCGCAAAGGACGA 60.203 55.556 0.00 0.00 45.96 4.20
362 363 2.539338 TTGCACCGCAAAGGACGAC 61.539 57.895 0.00 0.00 45.96 4.34
363 364 2.970324 GCACCGCAAAGGACGACA 60.970 61.111 0.00 0.00 45.00 4.35
364 365 2.935955 CACCGCAAAGGACGACAC 59.064 61.111 0.00 0.00 45.00 3.67
365 366 1.594293 CACCGCAAAGGACGACACT 60.594 57.895 0.00 0.00 45.00 3.55
366 367 1.145377 ACCGCAAAGGACGACACTT 59.855 52.632 0.00 0.00 45.00 3.16
367 368 0.878961 ACCGCAAAGGACGACACTTC 60.879 55.000 0.00 0.00 45.00 3.01
368 369 1.566018 CCGCAAAGGACGACACTTCC 61.566 60.000 0.00 0.00 45.00 3.46
369 370 0.878523 CGCAAAGGACGACACTTCCA 60.879 55.000 0.00 0.00 35.33 3.53
370 371 0.868406 GCAAAGGACGACACTTCCAG 59.132 55.000 0.00 0.00 35.33 3.86
371 372 1.540363 GCAAAGGACGACACTTCCAGA 60.540 52.381 0.00 0.00 35.33 3.86
372 373 2.872038 GCAAAGGACGACACTTCCAGAT 60.872 50.000 0.00 0.00 35.33 2.90
373 374 3.403038 CAAAGGACGACACTTCCAGATT 58.597 45.455 0.00 0.00 35.33 2.40
374 375 4.566004 CAAAGGACGACACTTCCAGATTA 58.434 43.478 0.00 0.00 35.33 1.75
375 376 3.870633 AGGACGACACTTCCAGATTAC 57.129 47.619 0.00 0.00 35.33 1.89
376 377 2.496470 AGGACGACACTTCCAGATTACC 59.504 50.000 0.00 0.00 35.33 2.85
377 378 2.232941 GGACGACACTTCCAGATTACCA 59.767 50.000 0.00 0.00 32.82 3.25
378 379 3.118738 GGACGACACTTCCAGATTACCAT 60.119 47.826 0.00 0.00 32.82 3.55
379 380 3.861840 ACGACACTTCCAGATTACCATG 58.138 45.455 0.00 0.00 0.00 3.66
380 381 3.198068 CGACACTTCCAGATTACCATGG 58.802 50.000 11.19 11.19 37.97 3.66
381 382 2.945668 GACACTTCCAGATTACCATGGC 59.054 50.000 13.04 0.00 36.47 4.40
393 394 1.820906 CCATGGCCACATCCGTCTG 60.821 63.158 8.16 0.00 34.35 3.51
406 407 0.528901 CCGTCTGACGACCAACAACA 60.529 55.000 29.93 0.00 46.05 3.33
572 575 8.689061 TGTTTACTAATTCTTAGCCGATCAGTA 58.311 33.333 0.00 0.00 36.71 2.74
688 695 7.148705 GCAACTATGTGATAAAGTGTACGTTGA 60.149 37.037 0.00 0.00 31.27 3.18
744 751 0.457035 CAATCAAACGATGGGCCCTG 59.543 55.000 25.70 15.55 0.00 4.45
783 796 3.829601 TGGTATGGCCTTTGTGGTTAAAG 59.170 43.478 3.32 0.00 38.35 1.85
914 1627 7.690256 TCCCTACTTTCTCTTAATTTGCTTCT 58.310 34.615 0.00 0.00 0.00 2.85
972 1687 6.898041 TGAAGACGTTCACAATTTTCATAGG 58.102 36.000 0.00 0.00 37.79 2.57
997 1712 4.514585 GCCACCACACCACCACCA 62.515 66.667 0.00 0.00 0.00 4.17
1053 1768 7.893124 ATTTCTCATTTGGCATGATACTTCT 57.107 32.000 0.00 0.00 0.00 2.85
1098 1813 0.179070 TTCTGTGCGTTACCACTGCA 60.179 50.000 5.78 0.00 36.68 4.41
1103 1821 0.871722 TGCGTTACCACTGCAATCAC 59.128 50.000 0.00 0.00 35.33 3.06
1120 1838 1.548719 TCACCCTGTACCTCATGAACG 59.451 52.381 0.00 0.00 0.00 3.95
1131 1849 3.419759 ATGAACGGTTCGCGCACC 61.420 61.111 18.52 18.52 0.00 5.01
1220 1938 2.054021 TGAGAACATTCACCACTCCCA 58.946 47.619 0.00 0.00 0.00 4.37
1228 1946 0.105709 TCACCACTCCCAGTCTGACA 60.106 55.000 10.88 0.00 0.00 3.58
1237 1955 0.852777 CCAGTCTGACAACAACGACG 59.147 55.000 10.88 0.00 0.00 5.12
1251 1969 2.150218 CGACGACGACAACCATCGG 61.150 63.158 0.00 0.00 46.56 4.18
1287 2005 1.070786 TGAACGGTCAGACCTTGGC 59.929 57.895 17.95 5.28 35.66 4.52
1330 2049 0.034896 CCACCACTATATCCCACCGC 59.965 60.000 0.00 0.00 0.00 5.68
1392 2111 3.307269 CCATCTTCACGGCCATAGATGAT 60.307 47.826 24.12 17.45 44.19 2.45
1398 2117 2.232208 CACGGCCATAGATGATCTGCTA 59.768 50.000 4.96 0.00 0.00 3.49
1400 2119 2.738000 CGGCCATAGATGATCTGCTAGC 60.738 54.545 8.10 8.10 0.00 3.42
1428 2147 6.832384 AGACATCTATCAACCTTGATGCAATT 59.168 34.615 10.28 0.00 46.68 2.32
1455 2174 0.599991 TCATCGTGAACTGCAGCGTT 60.600 50.000 15.27 1.47 0.00 4.84
1461 2180 2.731217 GTGAACTGCAGCGTTTTCAAT 58.269 42.857 15.27 0.00 30.00 2.57
1518 2237 9.237187 AGAAGATACAAGCTTCGAGATGATATA 57.763 33.333 0.00 0.00 44.88 0.86
1961 2684 9.017509 AGTCAAGATTGCAATTTTTCTCTCATA 57.982 29.630 14.33 0.00 0.00 2.15
2258 2981 5.784177 CTCAGGATACAAGTGTAACAGTGT 58.216 41.667 0.00 0.00 40.03 3.55
2331 3054 5.819379 AGATTGCATATATCGCTACCCAATG 59.181 40.000 0.00 0.00 0.00 2.82
2530 3253 2.038813 AAGAATTTGGGGGCCCGG 59.961 61.111 17.79 0.00 39.42 5.73
2648 3372 2.222007 AAAATTTGCTCAACTGCGCA 57.778 40.000 10.98 10.98 33.51 6.09
2657 3381 5.535043 TGCTCAACTGCGCAATATATATG 57.465 39.130 13.05 0.00 32.27 1.78
2795 3519 4.552883 TCCTCCCATATGTCCTTGACTA 57.447 45.455 1.24 0.00 33.15 2.59
2819 3543 1.106351 TGCACGCCACCAGTGAAAAT 61.106 50.000 0.00 0.00 41.83 1.82
2898 3622 8.747471 TGCAACATCTTTCATTTAATCCATACA 58.253 29.630 0.00 0.00 0.00 2.29
2936 3660 7.615582 TGGATTCAGTATCAGTTCAATGTTC 57.384 36.000 0.00 0.00 34.77 3.18
2964 3688 6.258230 TCATCAATCTGGAAATGAACACAC 57.742 37.500 0.00 0.00 0.00 3.82
2975 3699 4.408993 AATGAACACACACATCATGTCG 57.591 40.909 0.00 0.00 40.64 4.35
2997 3721 4.305769 GCATCTTGTATTGTTGTTTGCCA 58.694 39.130 0.00 0.00 0.00 4.92
2998 3722 4.749099 GCATCTTGTATTGTTGTTTGCCAA 59.251 37.500 0.00 0.00 0.00 4.52
3004 3728 3.724508 ATTGTTGTTTGCCAATCACGA 57.275 38.095 0.00 0.00 35.02 4.35
3062 3786 2.383527 GCAGTGCCGGTCTTTCTCG 61.384 63.158 2.85 0.00 0.00 4.04
3171 3895 2.811542 GAAGGGGAGCACTGCCAGAC 62.812 65.000 10.58 0.00 43.56 3.51
3174 3898 2.359230 GGAGCACTGCCAGACACC 60.359 66.667 0.00 0.00 0.00 4.16
3178 3902 2.986306 GCACTGCCAGACACCATGC 61.986 63.158 0.00 0.00 0.00 4.06
3181 3905 1.450848 CTGCCAGACACCATGCGAT 60.451 57.895 0.00 0.00 0.00 4.58
3182 3906 1.712018 CTGCCAGACACCATGCGATG 61.712 60.000 0.00 0.00 0.00 3.84
3183 3907 3.104766 CCAGACACCATGCGATGC 58.895 61.111 0.00 0.00 0.00 3.91
3184 3908 2.475466 CCAGACACCATGCGATGCC 61.475 63.158 0.00 0.00 0.00 4.40
3185 3909 2.512286 AGACACCATGCGATGCCG 60.512 61.111 0.00 0.00 39.16 5.69
3209 3933 2.028190 CGGAGCATCTACCAGGCG 59.972 66.667 0.00 0.00 33.73 5.52
3210 3934 2.423446 GGAGCATCTACCAGGCGG 59.577 66.667 0.00 0.00 34.42 6.13
3211 3935 2.423446 GAGCATCTACCAGGCGGG 59.577 66.667 0.79 0.79 44.81 6.13
3212 3936 2.041922 AGCATCTACCAGGCGGGA 60.042 61.111 11.67 0.00 41.15 5.14
3213 3937 2.109181 GCATCTACCAGGCGGGAC 59.891 66.667 11.67 0.00 41.15 4.46
3214 3938 2.435693 GCATCTACCAGGCGGGACT 61.436 63.158 11.67 0.00 41.15 3.85
3215 3939 1.113517 GCATCTACCAGGCGGGACTA 61.114 60.000 11.67 0.00 41.15 2.59
3216 3940 0.962489 CATCTACCAGGCGGGACTAG 59.038 60.000 11.67 2.67 41.15 2.57
3217 3941 0.851469 ATCTACCAGGCGGGACTAGA 59.149 55.000 11.67 8.55 41.15 2.43
3218 3942 0.106819 TCTACCAGGCGGGACTAGAC 60.107 60.000 11.67 0.00 41.15 2.59
3219 3943 0.395311 CTACCAGGCGGGACTAGACA 60.395 60.000 11.67 0.00 41.15 3.41
3220 3944 0.040058 TACCAGGCGGGACTAGACAA 59.960 55.000 11.67 0.00 41.15 3.18
3221 3945 1.218316 CCAGGCGGGACTAGACAAC 59.782 63.158 0.00 0.00 40.01 3.32
3222 3946 1.153823 CAGGCGGGACTAGACAACG 60.154 63.158 0.00 0.11 0.00 4.10
3223 3947 2.183555 GGCGGGACTAGACAACGG 59.816 66.667 0.00 0.00 0.00 4.44
3224 3948 2.183555 GCGGGACTAGACAACGGG 59.816 66.667 0.00 0.00 0.00 5.28
3225 3949 2.345760 GCGGGACTAGACAACGGGA 61.346 63.158 0.00 0.00 0.00 5.14
3226 3950 1.807886 CGGGACTAGACAACGGGAG 59.192 63.158 0.00 0.00 0.00 4.30
3227 3951 0.679002 CGGGACTAGACAACGGGAGA 60.679 60.000 0.00 0.00 0.00 3.71
3228 3952 1.104630 GGGACTAGACAACGGGAGAG 58.895 60.000 0.00 0.00 0.00 3.20
3229 3953 0.456628 GGACTAGACAACGGGAGAGC 59.543 60.000 0.00 0.00 0.00 4.09
3230 3954 1.174783 GACTAGACAACGGGAGAGCA 58.825 55.000 0.00 0.00 0.00 4.26
3231 3955 1.133407 GACTAGACAACGGGAGAGCAG 59.867 57.143 0.00 0.00 0.00 4.24
3232 3956 0.179124 CTAGACAACGGGAGAGCAGC 60.179 60.000 0.00 0.00 0.00 5.25
3233 3957 1.605058 TAGACAACGGGAGAGCAGCC 61.605 60.000 0.00 0.00 0.00 4.85
3234 3958 3.959991 GACAACGGGAGAGCAGCCC 62.960 68.421 0.00 0.00 42.41 5.19
3259 3983 3.345808 CGGTGTGCAACGGACCAG 61.346 66.667 1.15 0.00 42.39 4.00
3260 3984 3.660111 GGTGTGCAACGGACCAGC 61.660 66.667 0.00 0.00 42.39 4.85
3261 3985 2.899838 GTGTGCAACGGACCAGCA 60.900 61.111 0.00 0.00 42.39 4.41
3262 3986 2.591429 TGTGCAACGGACCAGCAG 60.591 61.111 3.70 0.00 42.39 4.24
3263 3987 2.591715 GTGCAACGGACCAGCAGT 60.592 61.111 3.70 0.00 39.21 4.40
3264 3988 2.186826 GTGCAACGGACCAGCAGTT 61.187 57.895 3.70 0.00 39.21 3.16
3265 3989 1.453015 TGCAACGGACCAGCAGTTT 60.453 52.632 0.00 0.00 32.40 2.66
3266 3990 1.034838 TGCAACGGACCAGCAGTTTT 61.035 50.000 0.00 0.00 32.40 2.43
3267 3991 0.102300 GCAACGGACCAGCAGTTTTT 59.898 50.000 0.00 0.00 32.40 1.94
3268 3992 1.838913 CAACGGACCAGCAGTTTTTG 58.161 50.000 0.00 0.00 32.40 2.44
3269 3993 1.403679 CAACGGACCAGCAGTTTTTGA 59.596 47.619 0.00 0.00 32.40 2.69
3270 3994 1.981256 ACGGACCAGCAGTTTTTGAT 58.019 45.000 0.00 0.00 0.00 2.57
3271 3995 2.306847 ACGGACCAGCAGTTTTTGATT 58.693 42.857 0.00 0.00 0.00 2.57
3272 3996 2.693074 ACGGACCAGCAGTTTTTGATTT 59.307 40.909 0.00 0.00 0.00 2.17
3273 3997 3.243401 ACGGACCAGCAGTTTTTGATTTC 60.243 43.478 0.00 0.00 0.00 2.17
3274 3998 3.004734 CGGACCAGCAGTTTTTGATTTCT 59.995 43.478 0.00 0.00 0.00 2.52
3275 3999 4.499696 CGGACCAGCAGTTTTTGATTTCTT 60.500 41.667 0.00 0.00 0.00 2.52
3276 4000 4.984785 GGACCAGCAGTTTTTGATTTCTTC 59.015 41.667 0.00 0.00 0.00 2.87
3277 4001 4.610945 ACCAGCAGTTTTTGATTTCTTCG 58.389 39.130 0.00 0.00 0.00 3.79
3278 4002 3.426525 CCAGCAGTTTTTGATTTCTTCGC 59.573 43.478 0.00 0.00 0.00 4.70
3279 4003 4.043750 CAGCAGTTTTTGATTTCTTCGCA 58.956 39.130 0.00 0.00 0.00 5.10
3280 4004 4.044426 AGCAGTTTTTGATTTCTTCGCAC 58.956 39.130 0.00 0.00 0.00 5.34
3281 4005 3.796178 GCAGTTTTTGATTTCTTCGCACA 59.204 39.130 0.00 0.00 0.00 4.57
3282 4006 4.085415 GCAGTTTTTGATTTCTTCGCACAG 60.085 41.667 0.00 0.00 0.00 3.66
3283 4007 4.442073 CAGTTTTTGATTTCTTCGCACAGG 59.558 41.667 0.00 0.00 0.00 4.00
3284 4008 4.338118 AGTTTTTGATTTCTTCGCACAGGA 59.662 37.500 0.00 0.00 0.00 3.86
3285 4009 4.488126 TTTTGATTTCTTCGCACAGGAG 57.512 40.909 0.00 0.00 0.00 3.69
3286 4010 1.442769 TGATTTCTTCGCACAGGAGC 58.557 50.000 0.00 0.00 0.00 4.70
3287 4011 1.270785 TGATTTCTTCGCACAGGAGCA 60.271 47.619 0.00 0.00 0.00 4.26
3288 4012 2.012673 GATTTCTTCGCACAGGAGCAT 58.987 47.619 0.00 0.00 0.00 3.79
3289 4013 1.159285 TTTCTTCGCACAGGAGCATG 58.841 50.000 0.00 0.00 0.00 4.06
3290 4014 0.674581 TTCTTCGCACAGGAGCATGG 60.675 55.000 0.00 0.00 0.00 3.66
3291 4015 2.046023 TTCGCACAGGAGCATGGG 60.046 61.111 0.00 0.00 0.00 4.00
3292 4016 2.526450 CTTCGCACAGGAGCATGGGA 62.526 60.000 0.00 0.00 36.14 4.37
3293 4017 2.513204 CGCACAGGAGCATGGGAG 60.513 66.667 0.00 0.00 0.00 4.30
3294 4018 2.993008 GCACAGGAGCATGGGAGA 59.007 61.111 0.00 0.00 0.00 3.71
3295 4019 1.530771 GCACAGGAGCATGGGAGAT 59.469 57.895 0.00 0.00 0.00 2.75
3296 4020 0.106819 GCACAGGAGCATGGGAGATT 60.107 55.000 0.00 0.00 0.00 2.40
3297 4021 1.676746 CACAGGAGCATGGGAGATTG 58.323 55.000 0.00 0.00 0.00 2.67
3298 4022 0.106819 ACAGGAGCATGGGAGATTGC 60.107 55.000 0.00 0.00 39.17 3.56
3299 4023 1.147824 AGGAGCATGGGAGATTGCG 59.852 57.895 0.00 0.00 43.61 4.85
3300 4024 1.146930 GGAGCATGGGAGATTGCGA 59.853 57.895 0.00 0.00 43.61 5.10
3301 4025 0.883814 GGAGCATGGGAGATTGCGAG 60.884 60.000 0.00 0.00 43.61 5.03
3302 4026 0.883814 GAGCATGGGAGATTGCGAGG 60.884 60.000 0.00 0.00 43.61 4.63
3303 4027 2.550101 GCATGGGAGATTGCGAGGC 61.550 63.158 0.00 0.00 0.00 4.70
3304 4028 2.109799 ATGGGAGATTGCGAGGCG 59.890 61.111 0.00 0.00 0.00 5.52
3305 4029 3.466791 ATGGGAGATTGCGAGGCGG 62.467 63.158 0.00 0.00 0.00 6.13
3325 4049 2.356913 CACATGTGCGTGGACGGA 60.357 61.111 13.94 0.00 40.23 4.69
3326 4050 2.048222 ACATGTGCGTGGACGGAG 60.048 61.111 0.00 0.00 41.17 4.63
3327 4051 2.815211 CATGTGCGTGGACGGAGG 60.815 66.667 0.71 0.00 41.17 4.30
3328 4052 2.994995 ATGTGCGTGGACGGAGGA 60.995 61.111 0.71 0.00 41.17 3.71
3329 4053 3.006756 ATGTGCGTGGACGGAGGAG 62.007 63.158 0.71 0.00 41.17 3.69
3330 4054 3.371063 GTGCGTGGACGGAGGAGA 61.371 66.667 0.71 0.00 41.17 3.71
3331 4055 2.599281 TGCGTGGACGGAGGAGAA 60.599 61.111 0.71 0.00 40.23 2.87
3332 4056 2.126031 GCGTGGACGGAGGAGAAC 60.126 66.667 0.71 0.00 40.23 3.01
3333 4057 2.637383 GCGTGGACGGAGGAGAACT 61.637 63.158 0.71 0.00 40.23 3.01
3334 4058 1.213013 CGTGGACGGAGGAGAACTG 59.787 63.158 0.00 0.00 35.37 3.16
3335 4059 1.592223 GTGGACGGAGGAGAACTGG 59.408 63.158 0.00 0.00 0.00 4.00
3336 4060 1.609501 TGGACGGAGGAGAACTGGG 60.610 63.158 0.00 0.00 0.00 4.45
3337 4061 2.359967 GGACGGAGGAGAACTGGGG 61.360 68.421 0.00 0.00 0.00 4.96
3338 4062 2.284699 ACGGAGGAGAACTGGGGG 60.285 66.667 0.00 0.00 0.00 5.40
3339 4063 2.038975 CGGAGGAGAACTGGGGGA 59.961 66.667 0.00 0.00 0.00 4.81
3340 4064 2.060980 CGGAGGAGAACTGGGGGAG 61.061 68.421 0.00 0.00 0.00 4.30
3341 4065 1.690985 GGAGGAGAACTGGGGGAGG 60.691 68.421 0.00 0.00 0.00 4.30
3342 4066 1.690985 GAGGAGAACTGGGGGAGGG 60.691 68.421 0.00 0.00 0.00 4.30
3343 4067 2.125225 GGAGAACTGGGGGAGGGT 59.875 66.667 0.00 0.00 0.00 4.34
3344 4068 1.996187 GGAGAACTGGGGGAGGGTC 60.996 68.421 0.00 0.00 0.00 4.46
3345 4069 2.284699 AGAACTGGGGGAGGGTCG 60.285 66.667 0.00 0.00 0.00 4.79
3346 4070 4.097361 GAACTGGGGGAGGGTCGC 62.097 72.222 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.027161 CCTAGTTGATTTACACCAAAATTCGG 58.973 38.462 0.00 0.00 0.00 4.30
1 2 7.812648 TCCTAGTTGATTTACACCAAAATTCG 58.187 34.615 0.00 0.00 0.00 3.34
4 5 9.927668 CAAATCCTAGTTGATTTACACCAAAAT 57.072 29.630 6.64 0.00 41.74 1.82
5 6 9.137459 TCAAATCCTAGTTGATTTACACCAAAA 57.863 29.630 6.64 0.00 41.74 2.44
6 7 8.698973 TCAAATCCTAGTTGATTTACACCAAA 57.301 30.769 6.64 0.00 41.74 3.28
7 8 8.877864 ATCAAATCCTAGTTGATTTACACCAA 57.122 30.769 6.64 0.00 41.82 3.67
8 9 9.613428 CTATCAAATCCTAGTTGATTTACACCA 57.387 33.333 11.14 0.00 41.82 4.17
9 10 9.614792 ACTATCAAATCCTAGTTGATTTACACC 57.385 33.333 11.14 0.00 41.82 4.16
11 12 9.613428 CCACTATCAAATCCTAGTTGATTTACA 57.387 33.333 11.14 1.83 41.82 2.41
12 13 9.832445 TCCACTATCAAATCCTAGTTGATTTAC 57.168 33.333 11.14 0.00 41.82 2.01
14 15 9.927081 AATCCACTATCAAATCCTAGTTGATTT 57.073 29.630 11.14 6.73 41.82 2.17
15 16 9.927081 AAATCCACTATCAAATCCTAGTTGATT 57.073 29.630 11.14 1.25 41.82 2.57
16 17 9.347240 CAAATCCACTATCAAATCCTAGTTGAT 57.653 33.333 10.79 10.79 45.42 2.57
17 18 8.548025 TCAAATCCACTATCAAATCCTAGTTGA 58.452 33.333 0.00 0.00 39.24 3.18
18 19 8.737168 TCAAATCCACTATCAAATCCTAGTTG 57.263 34.615 0.00 0.00 0.00 3.16
19 20 8.772250 TCTCAAATCCACTATCAAATCCTAGTT 58.228 33.333 0.00 0.00 0.00 2.24
20 21 8.324191 TCTCAAATCCACTATCAAATCCTAGT 57.676 34.615 0.00 0.00 0.00 2.57
21 22 7.877097 CCTCTCAAATCCACTATCAAATCCTAG 59.123 40.741 0.00 0.00 0.00 3.02
22 23 7.568738 TCCTCTCAAATCCACTATCAAATCCTA 59.431 37.037 0.00 0.00 0.00 2.94
23 24 6.388100 TCCTCTCAAATCCACTATCAAATCCT 59.612 38.462 0.00 0.00 0.00 3.24
24 25 6.595682 TCCTCTCAAATCCACTATCAAATCC 58.404 40.000 0.00 0.00 0.00 3.01
25 26 7.278875 ACTCCTCTCAAATCCACTATCAAATC 58.721 38.462 0.00 0.00 0.00 2.17
26 27 7.205515 ACTCCTCTCAAATCCACTATCAAAT 57.794 36.000 0.00 0.00 0.00 2.32
27 28 6.627087 ACTCCTCTCAAATCCACTATCAAA 57.373 37.500 0.00 0.00 0.00 2.69
28 29 6.627087 AACTCCTCTCAAATCCACTATCAA 57.373 37.500 0.00 0.00 0.00 2.57
29 30 6.627087 AAACTCCTCTCAAATCCACTATCA 57.373 37.500 0.00 0.00 0.00 2.15
30 31 7.492994 GTGTAAACTCCTCTCAAATCCACTATC 59.507 40.741 0.00 0.00 0.00 2.08
31 32 7.038302 TGTGTAAACTCCTCTCAAATCCACTAT 60.038 37.037 0.00 0.00 0.00 2.12
32 33 6.269077 TGTGTAAACTCCTCTCAAATCCACTA 59.731 38.462 0.00 0.00 0.00 2.74
33 34 5.071788 TGTGTAAACTCCTCTCAAATCCACT 59.928 40.000 0.00 0.00 0.00 4.00
34 35 5.305585 TGTGTAAACTCCTCTCAAATCCAC 58.694 41.667 0.00 0.00 0.00 4.02
35 36 5.560722 TGTGTAAACTCCTCTCAAATCCA 57.439 39.130 0.00 0.00 0.00 3.41
36 37 6.173339 TGATGTGTAAACTCCTCTCAAATCC 58.827 40.000 0.00 0.00 0.00 3.01
37 38 7.099764 TCTGATGTGTAAACTCCTCTCAAATC 58.900 38.462 0.00 0.00 0.00 2.17
38 39 7.009179 TCTGATGTGTAAACTCCTCTCAAAT 57.991 36.000 0.00 0.00 0.00 2.32
39 40 6.419484 TCTGATGTGTAAACTCCTCTCAAA 57.581 37.500 0.00 0.00 0.00 2.69
40 41 6.042093 AGTTCTGATGTGTAAACTCCTCTCAA 59.958 38.462 0.00 0.00 0.00 3.02
41 42 5.540337 AGTTCTGATGTGTAAACTCCTCTCA 59.460 40.000 0.00 0.00 0.00 3.27
42 43 5.866633 CAGTTCTGATGTGTAAACTCCTCTC 59.133 44.000 0.00 0.00 29.78 3.20
43 44 5.279708 CCAGTTCTGATGTGTAAACTCCTCT 60.280 44.000 1.00 0.00 29.78 3.69
44 45 4.932200 CCAGTTCTGATGTGTAAACTCCTC 59.068 45.833 1.00 0.00 29.78 3.71
45 46 4.593206 TCCAGTTCTGATGTGTAAACTCCT 59.407 41.667 1.00 0.00 29.78 3.69
46 47 4.894784 TCCAGTTCTGATGTGTAAACTCC 58.105 43.478 1.00 0.00 29.78 3.85
47 48 4.390297 GCTCCAGTTCTGATGTGTAAACTC 59.610 45.833 1.00 0.00 29.78 3.01
48 49 4.319177 GCTCCAGTTCTGATGTGTAAACT 58.681 43.478 1.00 0.00 32.34 2.66
49 50 3.437049 GGCTCCAGTTCTGATGTGTAAAC 59.563 47.826 1.00 0.00 0.00 2.01
50 51 3.559171 GGGCTCCAGTTCTGATGTGTAAA 60.559 47.826 1.00 0.00 0.00 2.01
51 52 2.027192 GGGCTCCAGTTCTGATGTGTAA 60.027 50.000 1.00 0.00 0.00 2.41
52 53 1.555075 GGGCTCCAGTTCTGATGTGTA 59.445 52.381 1.00 0.00 0.00 2.90
53 54 0.326264 GGGCTCCAGTTCTGATGTGT 59.674 55.000 1.00 0.00 0.00 3.72
54 55 0.393537 GGGGCTCCAGTTCTGATGTG 60.394 60.000 0.00 0.00 0.00 3.21
55 56 0.548682 AGGGGCTCCAGTTCTGATGT 60.549 55.000 4.79 0.00 34.83 3.06
56 57 0.107312 CAGGGGCTCCAGTTCTGATG 60.107 60.000 4.79 0.00 34.83 3.07
57 58 1.919600 GCAGGGGCTCCAGTTCTGAT 61.920 60.000 4.79 0.00 36.96 2.90
58 59 2.596851 GCAGGGGCTCCAGTTCTGA 61.597 63.158 4.79 0.00 36.96 3.27
59 60 2.045536 GCAGGGGCTCCAGTTCTG 60.046 66.667 4.79 0.00 36.96 3.02
60 61 1.919600 GATGCAGGGGCTCCAGTTCT 61.920 60.000 4.79 0.00 41.91 3.01
61 62 1.452833 GATGCAGGGGCTCCAGTTC 60.453 63.158 4.79 0.00 41.91 3.01
62 63 2.679716 GATGCAGGGGCTCCAGTT 59.320 61.111 4.79 0.00 41.91 3.16
63 64 3.415087 GGATGCAGGGGCTCCAGT 61.415 66.667 4.79 0.00 41.91 4.00
64 65 4.201122 GGGATGCAGGGGCTCCAG 62.201 72.222 4.79 0.00 41.91 3.86
67 68 4.247380 CTCGGGATGCAGGGGCTC 62.247 72.222 0.00 0.00 41.91 4.70
70 71 4.247380 GAGCTCGGGATGCAGGGG 62.247 72.222 0.00 0.00 0.00 4.79
71 72 2.262774 AAAGAGCTCGGGATGCAGGG 62.263 60.000 8.37 0.00 0.00 4.45
72 73 0.393537 AAAAGAGCTCGGGATGCAGG 60.394 55.000 8.37 0.00 0.00 4.85
73 74 1.012841 GAAAAGAGCTCGGGATGCAG 58.987 55.000 8.37 0.00 0.00 4.41
74 75 0.392998 GGAAAAGAGCTCGGGATGCA 60.393 55.000 8.37 0.00 0.00 3.96
75 76 1.432270 CGGAAAAGAGCTCGGGATGC 61.432 60.000 8.37 0.80 0.00 3.91
76 77 0.108138 ACGGAAAAGAGCTCGGGATG 60.108 55.000 8.37 0.71 0.00 3.51
77 78 0.613777 AACGGAAAAGAGCTCGGGAT 59.386 50.000 8.37 0.00 0.00 3.85
78 79 0.037605 GAACGGAAAAGAGCTCGGGA 60.038 55.000 8.37 0.00 0.00 5.14
79 80 1.019805 GGAACGGAAAAGAGCTCGGG 61.020 60.000 8.37 0.00 0.00 5.14
80 81 0.037232 AGGAACGGAAAAGAGCTCGG 60.037 55.000 8.37 0.00 0.00 4.63
81 82 1.797025 AAGGAACGGAAAAGAGCTCG 58.203 50.000 8.37 0.00 0.00 5.03
82 83 2.484651 GGAAAGGAACGGAAAAGAGCTC 59.515 50.000 5.27 5.27 0.00 4.09
83 84 2.106684 AGGAAAGGAACGGAAAAGAGCT 59.893 45.455 0.00 0.00 0.00 4.09
84 85 2.505405 AGGAAAGGAACGGAAAAGAGC 58.495 47.619 0.00 0.00 0.00 4.09
85 86 6.174049 AGATAAGGAAAGGAACGGAAAAGAG 58.826 40.000 0.00 0.00 0.00 2.85
86 87 6.013639 AGAGATAAGGAAAGGAACGGAAAAGA 60.014 38.462 0.00 0.00 0.00 2.52
87 88 6.174049 AGAGATAAGGAAAGGAACGGAAAAG 58.826 40.000 0.00 0.00 0.00 2.27
88 89 6.123045 AGAGATAAGGAAAGGAACGGAAAA 57.877 37.500 0.00 0.00 0.00 2.29
89 90 5.757099 AGAGATAAGGAAAGGAACGGAAA 57.243 39.130 0.00 0.00 0.00 3.13
90 91 6.839657 AGATAGAGATAAGGAAAGGAACGGAA 59.160 38.462 0.00 0.00 0.00 4.30
91 92 6.374588 AGATAGAGATAAGGAAAGGAACGGA 58.625 40.000 0.00 0.00 0.00 4.69
92 93 6.658188 AGATAGAGATAAGGAAAGGAACGG 57.342 41.667 0.00 0.00 0.00 4.44
93 94 7.014808 AGGAAGATAGAGATAAGGAAAGGAACG 59.985 40.741 0.00 0.00 0.00 3.95
94 95 8.257602 AGGAAGATAGAGATAAGGAAAGGAAC 57.742 38.462 0.00 0.00 0.00 3.62
95 96 8.293216 AGAGGAAGATAGAGATAAGGAAAGGAA 58.707 37.037 0.00 0.00 0.00 3.36
96 97 7.831955 AGAGGAAGATAGAGATAAGGAAAGGA 58.168 38.462 0.00 0.00 0.00 3.36
97 98 8.491045 AAGAGGAAGATAGAGATAAGGAAAGG 57.509 38.462 0.00 0.00 0.00 3.11
100 101 9.937876 TGTAAAGAGGAAGATAGAGATAAGGAA 57.062 33.333 0.00 0.00 0.00 3.36
101 102 9.357161 GTGTAAAGAGGAAGATAGAGATAAGGA 57.643 37.037 0.00 0.00 0.00 3.36
102 103 9.362151 AGTGTAAAGAGGAAGATAGAGATAAGG 57.638 37.037 0.00 0.00 0.00 2.69
106 107 8.912988 CAAGAGTGTAAAGAGGAAGATAGAGAT 58.087 37.037 0.00 0.00 0.00 2.75
107 108 7.891183 ACAAGAGTGTAAAGAGGAAGATAGAGA 59.109 37.037 0.00 0.00 35.72 3.10
108 109 8.062065 ACAAGAGTGTAAAGAGGAAGATAGAG 57.938 38.462 0.00 0.00 35.72 2.43
109 110 7.122948 GGACAAGAGTGTAAAGAGGAAGATAGA 59.877 40.741 0.00 0.00 38.41 1.98
110 111 7.123547 AGGACAAGAGTGTAAAGAGGAAGATAG 59.876 40.741 0.00 0.00 38.41 2.08
111 112 6.954684 AGGACAAGAGTGTAAAGAGGAAGATA 59.045 38.462 0.00 0.00 38.41 1.98
112 113 5.782845 AGGACAAGAGTGTAAAGAGGAAGAT 59.217 40.000 0.00 0.00 38.41 2.40
113 114 5.148502 AGGACAAGAGTGTAAAGAGGAAGA 58.851 41.667 0.00 0.00 38.41 2.87
114 115 5.474825 GAGGACAAGAGTGTAAAGAGGAAG 58.525 45.833 0.00 0.00 38.41 3.46
115 116 4.283722 GGAGGACAAGAGTGTAAAGAGGAA 59.716 45.833 0.00 0.00 38.41 3.36
116 117 3.833070 GGAGGACAAGAGTGTAAAGAGGA 59.167 47.826 0.00 0.00 38.41 3.71
117 118 3.835395 AGGAGGACAAGAGTGTAAAGAGG 59.165 47.826 0.00 0.00 38.41 3.69
118 119 4.524714 TCAGGAGGACAAGAGTGTAAAGAG 59.475 45.833 0.00 0.00 38.41 2.85
119 120 4.281182 GTCAGGAGGACAAGAGTGTAAAGA 59.719 45.833 0.00 0.00 46.19 2.52
120 121 4.561105 GTCAGGAGGACAAGAGTGTAAAG 58.439 47.826 0.00 0.00 46.19 1.85
121 122 4.602340 GTCAGGAGGACAAGAGTGTAAA 57.398 45.455 0.00 0.00 46.19 2.01
150 151 9.338622 GGCAGGATTATGTACTAAAGTGTAAAT 57.661 33.333 0.00 0.00 0.00 1.40
151 152 8.322828 TGGCAGGATTATGTACTAAAGTGTAAA 58.677 33.333 0.00 0.00 0.00 2.01
152 153 7.853299 TGGCAGGATTATGTACTAAAGTGTAA 58.147 34.615 0.00 0.00 0.00 2.41
153 154 7.426606 TGGCAGGATTATGTACTAAAGTGTA 57.573 36.000 0.00 0.00 0.00 2.90
154 155 6.308015 TGGCAGGATTATGTACTAAAGTGT 57.692 37.500 0.00 0.00 0.00 3.55
155 156 7.624360 TTTGGCAGGATTATGTACTAAAGTG 57.376 36.000 0.00 0.00 0.00 3.16
156 157 9.338622 GTATTTGGCAGGATTATGTACTAAAGT 57.661 33.333 0.00 0.00 0.00 2.66
157 158 9.337396 TGTATTTGGCAGGATTATGTACTAAAG 57.663 33.333 0.00 0.00 0.00 1.85
158 159 9.688091 TTGTATTTGGCAGGATTATGTACTAAA 57.312 29.630 0.00 0.00 0.00 1.85
159 160 9.688091 TTTGTATTTGGCAGGATTATGTACTAA 57.312 29.630 0.00 0.00 0.00 2.24
160 161 9.860650 ATTTGTATTTGGCAGGATTATGTACTA 57.139 29.630 0.00 0.00 0.00 1.82
161 162 8.766994 ATTTGTATTTGGCAGGATTATGTACT 57.233 30.769 0.00 0.00 0.00 2.73
162 163 9.816354 AAATTTGTATTTGGCAGGATTATGTAC 57.184 29.630 0.00 0.00 32.79 2.90
164 165 9.816354 GTAAATTTGTATTTGGCAGGATTATGT 57.184 29.630 0.00 0.00 35.61 2.29
165 166 9.814899 TGTAAATTTGTATTTGGCAGGATTATG 57.185 29.630 0.00 0.00 35.61 1.90
166 167 9.816354 GTGTAAATTTGTATTTGGCAGGATTAT 57.184 29.630 0.00 0.00 35.61 1.28
167 168 8.254508 GGTGTAAATTTGTATTTGGCAGGATTA 58.745 33.333 0.00 0.00 35.61 1.75
168 169 7.038373 AGGTGTAAATTTGTATTTGGCAGGATT 60.038 33.333 0.00 0.00 35.61 3.01
169 170 6.440328 AGGTGTAAATTTGTATTTGGCAGGAT 59.560 34.615 0.00 0.00 35.61 3.24
170 171 5.777732 AGGTGTAAATTTGTATTTGGCAGGA 59.222 36.000 0.00 0.00 35.61 3.86
171 172 6.036577 AGGTGTAAATTTGTATTTGGCAGG 57.963 37.500 0.00 0.00 35.61 4.85
172 173 8.921670 GTTTAGGTGTAAATTTGTATTTGGCAG 58.078 33.333 0.00 0.00 35.61 4.85
173 174 8.643324 AGTTTAGGTGTAAATTTGTATTTGGCA 58.357 29.630 0.00 0.00 35.61 4.92
174 175 9.135843 GAGTTTAGGTGTAAATTTGTATTTGGC 57.864 33.333 0.00 0.00 35.61 4.52
180 181 9.175312 TGTGTTGAGTTTAGGTGTAAATTTGTA 57.825 29.630 0.00 0.00 30.76 2.41
181 182 8.057536 TGTGTTGAGTTTAGGTGTAAATTTGT 57.942 30.769 0.00 0.00 30.76 2.83
182 183 9.528018 AATGTGTTGAGTTTAGGTGTAAATTTG 57.472 29.630 0.00 0.00 30.76 2.32
183 184 9.528018 CAATGTGTTGAGTTTAGGTGTAAATTT 57.472 29.630 0.00 0.00 37.53 1.82
184 185 7.651704 GCAATGTGTTGAGTTTAGGTGTAAATT 59.348 33.333 0.00 0.00 37.53 1.82
185 186 7.145323 GCAATGTGTTGAGTTTAGGTGTAAAT 58.855 34.615 0.00 0.00 37.53 1.40
186 187 6.095580 TGCAATGTGTTGAGTTTAGGTGTAAA 59.904 34.615 0.00 0.00 37.53 2.01
187 188 5.590663 TGCAATGTGTTGAGTTTAGGTGTAA 59.409 36.000 0.00 0.00 37.53 2.41
188 189 5.126779 TGCAATGTGTTGAGTTTAGGTGTA 58.873 37.500 0.00 0.00 37.53 2.90
189 190 3.951037 TGCAATGTGTTGAGTTTAGGTGT 59.049 39.130 0.00 0.00 37.53 4.16
190 191 4.566545 TGCAATGTGTTGAGTTTAGGTG 57.433 40.909 0.00 0.00 37.53 4.00
191 192 6.095440 GGATATGCAATGTGTTGAGTTTAGGT 59.905 38.462 0.00 0.00 37.53 3.08
192 193 6.319658 AGGATATGCAATGTGTTGAGTTTAGG 59.680 38.462 0.00 0.00 37.53 2.69
193 194 7.325660 AGGATATGCAATGTGTTGAGTTTAG 57.674 36.000 0.00 0.00 37.53 1.85
194 195 7.537715 CAAGGATATGCAATGTGTTGAGTTTA 58.462 34.615 0.00 0.00 37.53 2.01
195 196 6.392354 CAAGGATATGCAATGTGTTGAGTTT 58.608 36.000 0.00 0.00 37.53 2.66
196 197 5.622914 GCAAGGATATGCAATGTGTTGAGTT 60.623 40.000 0.00 0.00 45.70 3.01
197 198 4.142315 GCAAGGATATGCAATGTGTTGAGT 60.142 41.667 0.00 0.00 45.70 3.41
198 199 4.357142 GCAAGGATATGCAATGTGTTGAG 58.643 43.478 0.00 0.00 45.70 3.02
199 200 4.374843 GCAAGGATATGCAATGTGTTGA 57.625 40.909 0.00 0.00 45.70 3.18
209 210 3.376546 GCTAGGCTAATGCAAGGATATGC 59.623 47.826 0.00 0.00 46.58 3.14
210 211 4.841422 AGCTAGGCTAATGCAAGGATATG 58.159 43.478 8.29 0.00 41.91 1.78
211 212 4.080638 GGAGCTAGGCTAATGCAAGGATAT 60.081 45.833 8.29 0.00 39.88 1.63
212 213 3.261897 GGAGCTAGGCTAATGCAAGGATA 59.738 47.826 8.29 0.00 39.88 2.59
213 214 2.039613 GGAGCTAGGCTAATGCAAGGAT 59.960 50.000 8.29 0.00 39.88 3.24
214 215 1.417890 GGAGCTAGGCTAATGCAAGGA 59.582 52.381 8.29 0.00 39.88 3.36
215 216 1.875576 CGGAGCTAGGCTAATGCAAGG 60.876 57.143 8.29 0.00 39.88 3.61
216 217 1.202580 ACGGAGCTAGGCTAATGCAAG 60.203 52.381 8.29 0.00 39.88 4.01
217 218 0.830648 ACGGAGCTAGGCTAATGCAA 59.169 50.000 8.29 0.00 39.88 4.08
218 219 0.389391 GACGGAGCTAGGCTAATGCA 59.611 55.000 8.29 0.00 39.88 3.96
219 220 0.319986 GGACGGAGCTAGGCTAATGC 60.320 60.000 0.00 0.00 39.88 3.56
220 221 0.318762 GGGACGGAGCTAGGCTAATG 59.681 60.000 0.00 0.00 39.88 1.90
221 222 0.188834 AGGGACGGAGCTAGGCTAAT 59.811 55.000 0.00 0.00 39.88 1.73
222 223 0.755698 CAGGGACGGAGCTAGGCTAA 60.756 60.000 0.00 0.00 39.88 3.09
223 224 1.152735 CAGGGACGGAGCTAGGCTA 60.153 63.158 0.00 0.00 39.88 3.93
224 225 2.443016 CAGGGACGGAGCTAGGCT 60.443 66.667 0.00 0.00 43.88 4.58
225 226 4.228567 GCAGGGACGGAGCTAGGC 62.229 72.222 0.00 0.00 0.00 3.93
226 227 3.541713 GGCAGGGACGGAGCTAGG 61.542 72.222 0.00 0.00 0.00 3.02
227 228 2.443016 AGGCAGGGACGGAGCTAG 60.443 66.667 0.00 0.00 0.00 3.42
228 229 2.442272 GAGGCAGGGACGGAGCTA 60.442 66.667 0.00 0.00 0.00 3.32
231 232 3.465403 CAGGAGGCAGGGACGGAG 61.465 72.222 0.00 0.00 0.00 4.63
234 235 3.775654 GACCAGGAGGCAGGGACG 61.776 72.222 0.00 0.00 39.06 4.79
235 236 2.607750 TGACCAGGAGGCAGGGAC 60.608 66.667 0.00 0.00 39.06 4.46
236 237 2.607750 GTGACCAGGAGGCAGGGA 60.608 66.667 0.00 0.00 39.06 4.20
237 238 2.930019 TGTGACCAGGAGGCAGGG 60.930 66.667 0.00 0.00 39.06 4.45
238 239 1.483595 TTCTGTGACCAGGAGGCAGG 61.484 60.000 0.00 0.00 39.31 4.85
239 240 0.036577 CTTCTGTGACCAGGAGGCAG 60.037 60.000 0.00 0.00 40.22 4.85
240 241 2.061220 CTTCTGTGACCAGGAGGCA 58.939 57.895 0.00 0.00 40.22 4.75
243 244 1.298014 GCCCTTCTGTGACCAGGAG 59.702 63.158 0.00 0.00 43.11 3.69
244 245 1.059584 TTGCCCTTCTGTGACCAGGA 61.060 55.000 0.00 0.00 39.31 3.86
245 246 0.607489 CTTGCCCTTCTGTGACCAGG 60.607 60.000 0.00 0.00 39.31 4.45
246 247 1.239968 GCTTGCCCTTCTGTGACCAG 61.240 60.000 0.00 0.00 40.25 4.00
247 248 1.228245 GCTTGCCCTTCTGTGACCA 60.228 57.895 0.00 0.00 0.00 4.02
248 249 2.328099 CGCTTGCCCTTCTGTGACC 61.328 63.158 0.00 0.00 0.00 4.02
249 250 2.328099 CCGCTTGCCCTTCTGTGAC 61.328 63.158 0.00 0.00 0.00 3.67
250 251 2.032528 CCGCTTGCCCTTCTGTGA 59.967 61.111 0.00 0.00 0.00 3.58
251 252 3.741476 GCCGCTTGCCCTTCTGTG 61.741 66.667 0.00 0.00 0.00 3.66
252 253 3.958860 AGCCGCTTGCCCTTCTGT 61.959 61.111 0.00 0.00 42.71 3.41
253 254 3.437795 CAGCCGCTTGCCCTTCTG 61.438 66.667 0.00 0.00 42.71 3.02
254 255 2.976490 ATCAGCCGCTTGCCCTTCT 61.976 57.895 0.00 0.00 42.71 2.85
255 256 2.439156 ATCAGCCGCTTGCCCTTC 60.439 61.111 0.00 0.00 42.71 3.46
256 257 2.753043 CATCAGCCGCTTGCCCTT 60.753 61.111 0.00 0.00 42.71 3.95
260 261 4.527157 GTCGCATCAGCCGCTTGC 62.527 66.667 6.94 6.94 41.71 4.01
261 262 1.985447 ATTGTCGCATCAGCCGCTTG 61.985 55.000 0.00 0.00 37.52 4.01
262 263 1.709147 GATTGTCGCATCAGCCGCTT 61.709 55.000 0.00 0.00 37.52 4.68
263 264 2.124983 ATTGTCGCATCAGCCGCT 60.125 55.556 0.00 0.00 37.52 5.52
264 265 2.325857 GATTGTCGCATCAGCCGC 59.674 61.111 0.00 0.00 37.52 6.53
265 266 2.537560 GGGATTGTCGCATCAGCCG 61.538 63.158 0.00 0.00 37.52 5.52
266 267 2.189499 GGGGATTGTCGCATCAGCC 61.189 63.158 0.00 0.00 37.52 4.85
267 268 1.451927 TGGGGATTGTCGCATCAGC 60.452 57.895 0.00 0.00 37.42 4.26
268 269 0.107508 AGTGGGGATTGTCGCATCAG 60.108 55.000 0.00 0.00 32.33 2.90
269 270 0.327924 AAGTGGGGATTGTCGCATCA 59.672 50.000 0.00 0.00 32.33 3.07
270 271 0.734889 CAAGTGGGGATTGTCGCATC 59.265 55.000 0.00 0.00 32.33 3.91
271 272 0.680921 CCAAGTGGGGATTGTCGCAT 60.681 55.000 0.00 0.00 32.33 4.73
272 273 1.303236 CCAAGTGGGGATTGTCGCA 60.303 57.895 0.00 0.00 0.00 5.10
273 274 2.700773 GCCAAGTGGGGATTGTCGC 61.701 63.158 0.00 0.00 37.04 5.19
274 275 2.046285 GGCCAAGTGGGGATTGTCG 61.046 63.158 0.00 0.00 37.04 4.35
275 276 0.967380 CTGGCCAAGTGGGGATTGTC 60.967 60.000 7.01 0.00 37.04 3.18
276 277 1.077265 CTGGCCAAGTGGGGATTGT 59.923 57.895 7.01 0.00 37.04 2.71
277 278 2.353610 GCTGGCCAAGTGGGGATTG 61.354 63.158 7.01 0.00 37.04 2.67
278 279 2.037847 GCTGGCCAAGTGGGGATT 59.962 61.111 7.01 0.00 37.04 3.01
279 280 2.505364 GAAGCTGGCCAAGTGGGGAT 62.505 60.000 7.01 0.00 37.04 3.85
280 281 3.185203 AAGCTGGCCAAGTGGGGA 61.185 61.111 7.01 0.00 37.04 4.81
281 282 2.677875 GAAGCTGGCCAAGTGGGG 60.678 66.667 7.01 0.00 37.04 4.96
282 283 1.676967 GAGAAGCTGGCCAAGTGGG 60.677 63.158 7.01 0.00 40.85 4.61
283 284 1.676967 GGAGAAGCTGGCCAAGTGG 60.677 63.158 7.01 0.00 38.53 4.00
284 285 2.037136 CGGAGAAGCTGGCCAAGTG 61.037 63.158 7.01 0.00 0.00 3.16
285 286 2.217038 TCGGAGAAGCTGGCCAAGT 61.217 57.895 7.01 0.00 0.00 3.16
286 287 1.743252 GTCGGAGAAGCTGGCCAAG 60.743 63.158 7.01 1.85 39.69 3.61
287 288 2.347490 GTCGGAGAAGCTGGCCAA 59.653 61.111 7.01 0.00 39.69 4.52
288 289 4.069232 CGTCGGAGAAGCTGGCCA 62.069 66.667 4.71 4.71 39.69 5.36
289 290 3.991536 GACGTCGGAGAAGCTGGCC 62.992 68.421 0.00 0.00 40.38 5.36
290 291 2.507324 GACGTCGGAGAAGCTGGC 60.507 66.667 0.00 0.00 40.38 4.85
291 292 2.154798 TTGGACGTCGGAGAAGCTGG 62.155 60.000 9.92 0.00 40.38 4.85
292 293 1.009389 GTTGGACGTCGGAGAAGCTG 61.009 60.000 9.92 0.00 40.38 4.24
293 294 1.289380 GTTGGACGTCGGAGAAGCT 59.711 57.895 9.92 0.00 40.38 3.74
294 295 2.087009 CGTTGGACGTCGGAGAAGC 61.087 63.158 9.92 0.00 40.38 3.86
295 296 2.087009 GCGTTGGACGTCGGAGAAG 61.087 63.158 9.92 0.00 44.73 2.85
296 297 2.049802 GCGTTGGACGTCGGAGAA 60.050 61.111 9.92 0.00 44.73 2.87
297 298 4.047059 GGCGTTGGACGTCGGAGA 62.047 66.667 9.92 0.00 44.73 3.71
302 303 3.408851 GAACGGGCGTTGGACGTC 61.409 66.667 7.13 7.13 46.91 4.34
303 304 4.224274 TGAACGGGCGTTGGACGT 62.224 61.111 0.00 0.00 44.73 4.34
304 305 3.411351 CTGAACGGGCGTTGGACG 61.411 66.667 0.00 0.00 45.88 4.79
305 306 1.161563 TTTCTGAACGGGCGTTGGAC 61.162 55.000 0.00 0.00 38.60 4.02
306 307 0.882927 CTTTCTGAACGGGCGTTGGA 60.883 55.000 0.00 0.00 38.60 3.53
307 308 1.574428 CTTTCTGAACGGGCGTTGG 59.426 57.895 0.00 0.00 38.60 3.77
308 309 1.574428 CCTTTCTGAACGGGCGTTG 59.426 57.895 5.07 0.00 38.60 4.10
309 310 2.258726 GCCTTTCTGAACGGGCGTT 61.259 57.895 13.99 0.00 41.54 4.84
310 311 2.668550 GCCTTTCTGAACGGGCGT 60.669 61.111 13.99 0.00 35.08 5.68
312 313 2.358247 TCGCCTTTCTGAACGGGC 60.358 61.111 18.16 18.16 41.02 6.13
313 314 2.391389 GCTCGCCTTTCTGAACGGG 61.391 63.158 13.99 9.12 0.00 5.28
314 315 2.391389 GGCTCGCCTTTCTGAACGG 61.391 63.158 8.47 8.47 0.00 4.44
315 316 1.021390 ATGGCTCGCCTTTCTGAACG 61.021 55.000 9.65 0.00 36.94 3.95
316 317 0.449388 CATGGCTCGCCTTTCTGAAC 59.551 55.000 9.65 0.00 36.94 3.18
317 318 1.308069 GCATGGCTCGCCTTTCTGAA 61.308 55.000 9.65 0.00 36.94 3.02
318 319 1.746615 GCATGGCTCGCCTTTCTGA 60.747 57.895 9.65 0.00 36.94 3.27
319 320 1.588824 TTGCATGGCTCGCCTTTCTG 61.589 55.000 9.65 3.27 36.94 3.02
320 321 0.895100 TTTGCATGGCTCGCCTTTCT 60.895 50.000 9.65 0.00 36.94 2.52
321 322 0.457337 CTTTGCATGGCTCGCCTTTC 60.457 55.000 9.65 0.00 36.94 2.62
322 323 0.895100 TCTTTGCATGGCTCGCCTTT 60.895 50.000 9.65 0.00 36.94 3.11
323 324 0.895100 TTCTTTGCATGGCTCGCCTT 60.895 50.000 9.65 0.00 36.94 4.35
324 325 1.303561 TTCTTTGCATGGCTCGCCT 60.304 52.632 9.65 0.00 36.94 5.52
325 326 1.153958 GTTCTTTGCATGGCTCGCC 60.154 57.895 0.00 0.00 0.00 5.54
326 327 0.242017 AAGTTCTTTGCATGGCTCGC 59.758 50.000 0.00 0.00 0.00 5.03
327 328 1.973138 CAAGTTCTTTGCATGGCTCG 58.027 50.000 0.00 0.00 0.00 5.03
336 337 3.639162 TTGCGGTGCAAGTTCTTTG 57.361 47.368 0.00 0.00 43.99 2.77
345 346 2.970324 GTCGTCCTTTGCGGTGCA 60.970 61.111 0.00 0.00 36.47 4.57
346 347 2.970324 TGTCGTCCTTTGCGGTGC 60.970 61.111 0.00 0.00 0.00 5.01
347 348 1.157870 AAGTGTCGTCCTTTGCGGTG 61.158 55.000 0.00 0.00 0.00 4.94
348 349 0.878961 GAAGTGTCGTCCTTTGCGGT 60.879 55.000 0.00 0.00 0.00 5.68
349 350 1.566018 GGAAGTGTCGTCCTTTGCGG 61.566 60.000 0.00 0.00 31.94 5.69
350 351 0.878523 TGGAAGTGTCGTCCTTTGCG 60.879 55.000 3.76 0.00 36.03 4.85
351 352 0.868406 CTGGAAGTGTCGTCCTTTGC 59.132 55.000 3.76 0.00 36.03 3.68
352 353 2.526304 TCTGGAAGTGTCGTCCTTTG 57.474 50.000 3.76 0.00 36.03 2.77
353 354 3.771577 AATCTGGAAGTGTCGTCCTTT 57.228 42.857 3.76 0.00 36.03 3.11
354 355 3.056035 GGTAATCTGGAAGTGTCGTCCTT 60.056 47.826 3.76 0.00 36.03 3.36
355 356 2.496470 GGTAATCTGGAAGTGTCGTCCT 59.504 50.000 3.76 0.00 36.03 3.85
356 357 2.232941 TGGTAATCTGGAAGTGTCGTCC 59.767 50.000 0.00 0.00 35.55 4.79
357 358 3.587797 TGGTAATCTGGAAGTGTCGTC 57.412 47.619 0.00 0.00 33.76 4.20
358 359 3.369471 CCATGGTAATCTGGAAGTGTCGT 60.369 47.826 2.57 0.00 34.24 4.34
359 360 3.198068 CCATGGTAATCTGGAAGTGTCG 58.802 50.000 2.57 0.00 34.24 4.35
360 361 2.945668 GCCATGGTAATCTGGAAGTGTC 59.054 50.000 14.67 0.00 34.24 3.67
361 362 2.357154 GGCCATGGTAATCTGGAAGTGT 60.357 50.000 14.67 0.00 34.24 3.55
362 363 2.301346 GGCCATGGTAATCTGGAAGTG 58.699 52.381 14.67 0.00 34.24 3.16
363 364 1.922447 TGGCCATGGTAATCTGGAAGT 59.078 47.619 14.67 0.00 34.24 3.01
364 365 2.301346 GTGGCCATGGTAATCTGGAAG 58.699 52.381 9.72 0.00 34.24 3.46
365 366 1.638070 TGTGGCCATGGTAATCTGGAA 59.362 47.619 9.72 0.00 34.24 3.53
366 367 1.294041 TGTGGCCATGGTAATCTGGA 58.706 50.000 9.72 0.00 34.24 3.86
367 368 2.233271 GATGTGGCCATGGTAATCTGG 58.767 52.381 9.72 0.00 35.53 3.86
368 369 2.233271 GGATGTGGCCATGGTAATCTG 58.767 52.381 9.72 0.00 0.00 2.90
369 370 1.202806 CGGATGTGGCCATGGTAATCT 60.203 52.381 9.72 0.00 0.00 2.40
370 371 1.238439 CGGATGTGGCCATGGTAATC 58.762 55.000 9.72 10.93 0.00 1.75
371 372 0.550914 ACGGATGTGGCCATGGTAAT 59.449 50.000 9.72 1.88 0.00 1.89
372 373 0.107410 GACGGATGTGGCCATGGTAA 60.107 55.000 9.72 0.00 0.00 2.85
373 374 0.980754 AGACGGATGTGGCCATGGTA 60.981 55.000 9.72 0.00 0.00 3.25
374 375 2.272146 GACGGATGTGGCCATGGT 59.728 61.111 9.72 2.33 0.00 3.55
375 376 1.820906 CAGACGGATGTGGCCATGG 60.821 63.158 9.72 7.63 0.00 3.66
376 377 1.091771 GTCAGACGGATGTGGCCATG 61.092 60.000 9.72 0.00 0.00 3.66
377 378 1.221840 GTCAGACGGATGTGGCCAT 59.778 57.895 9.72 0.00 0.00 4.40
378 379 2.662596 GTCAGACGGATGTGGCCA 59.337 61.111 0.00 0.00 0.00 5.36
379 380 2.509336 CGTCAGACGGATGTGGCC 60.509 66.667 15.64 0.00 38.08 5.36
380 381 1.805945 GTCGTCAGACGGATGTGGC 60.806 63.158 22.66 1.83 42.81 5.01
381 382 4.478195 GTCGTCAGACGGATGTGG 57.522 61.111 22.66 0.00 42.81 4.17
393 394 0.463116 ACCAGGTGTTGTTGGTCGTC 60.463 55.000 0.00 0.00 44.16 4.20
406 407 2.519771 TATGTACAGACGGACCAGGT 57.480 50.000 0.33 0.00 0.00 4.00
414 415 7.161829 ACGCTCAAAATTATATGTACAGACG 57.838 36.000 0.33 0.00 0.00 4.18
653 660 4.558226 ATCACATAGTTGCACTTCTCCA 57.442 40.909 0.00 0.00 0.00 3.86
662 669 6.642683 ACGTACACTTTATCACATAGTTGC 57.357 37.500 0.00 0.00 0.00 4.17
688 695 8.408043 TGTCTCAATCCACATTATGAAAAGTT 57.592 30.769 0.00 0.00 0.00 2.66
744 751 9.586435 GGCCATACCAGCAATATTTTTATTATC 57.414 33.333 0.00 0.00 38.86 1.75
914 1627 9.078990 CTGGTAGTGATACTTGGTAGATGAATA 57.921 37.037 0.00 0.00 0.00 1.75
1053 1768 1.375908 GAAGAGGCGGATGTGTGCA 60.376 57.895 0.00 0.00 0.00 4.57
1098 1813 3.369471 CGTTCATGAGGTACAGGGTGATT 60.369 47.826 0.00 0.00 0.00 2.57
1103 1821 0.902531 ACCGTTCATGAGGTACAGGG 59.097 55.000 4.86 3.47 39.30 4.45
1120 1838 0.318445 AGATATACGGTGCGCGAACC 60.318 55.000 27.41 27.41 36.82 3.62
1131 1849 6.369890 AGCAGGCATAATCAACAAGATATACG 59.630 38.462 0.00 0.00 35.39 3.06
1220 1938 1.836383 GTCGTCGTTGTTGTCAGACT 58.164 50.000 1.31 0.00 0.00 3.24
1228 1946 0.458197 TGGTTGTCGTCGTCGTTGTT 60.458 50.000 1.33 0.00 38.33 2.83
1237 1955 1.459592 CAAGAACCGATGGTTGTCGTC 59.540 52.381 5.85 0.00 46.95 4.20
1251 1969 4.143179 CGTTCAGAAATACGGGTCAAGAAC 60.143 45.833 0.00 0.00 34.30 3.01
1280 1998 0.824759 GTAGGTCTCATCGCCAAGGT 59.175 55.000 0.00 0.00 0.00 3.50
1287 2005 1.797211 GCGGGAGGTAGGTCTCATCG 61.797 65.000 0.00 0.00 35.58 3.84
1330 2049 5.898606 CACGAGCTTCGCTTAAAGAATAATG 59.101 40.000 5.63 0.00 45.12 1.90
1350 2069 1.664649 CAGTTCCGCTTCTGCACGA 60.665 57.895 0.00 0.00 39.64 4.35
1392 2111 4.137543 TGATAGATGTCTTCGCTAGCAGA 58.862 43.478 16.45 8.16 0.00 4.26
1398 2117 4.160439 TCAAGGTTGATAGATGTCTTCGCT 59.840 41.667 0.00 0.00 31.01 4.93
1400 2119 5.050499 GCATCAAGGTTGATAGATGTCTTCG 60.050 44.000 4.89 0.00 45.62 3.79
1428 2147 3.056179 TGCAGTTCACGATGAGTATGGAA 60.056 43.478 0.00 0.00 0.00 3.53
1557 2276 3.019003 AAGACCCACCGCGATGAGG 62.019 63.158 8.23 7.13 0.00 3.86
1560 2279 3.499737 GCAAGACCCACCGCGATG 61.500 66.667 8.23 0.00 0.00 3.84
1680 2399 2.223479 GCGGAACAACATGTTGAACACT 60.223 45.455 38.30 17.75 41.28 3.55
1961 2684 3.806949 TTAGCACCTTCCCTGAAATGT 57.193 42.857 0.00 0.00 0.00 2.71
1965 2688 2.647299 TCCATTTAGCACCTTCCCTGAA 59.353 45.455 0.00 0.00 0.00 3.02
2258 2981 1.608055 CTGGATGCACTTCAACACCA 58.392 50.000 0.00 0.00 0.00 4.17
2316 3039 4.565652 GGAACATCCATTGGGTAGCGATAT 60.566 45.833 2.09 0.00 36.28 1.63
2502 3225 0.811281 CAAATTCTTGGAGACGGCCC 59.189 55.000 0.00 0.00 0.00 5.80
2530 3253 9.566530 AATTAAAATTTTATTTGCATTTCGCCC 57.433 25.926 11.33 0.00 41.33 6.13
2746 3470 4.147219 ACGAAGCAAACTATTGACTTGC 57.853 40.909 9.41 9.41 44.61 4.01
2766 3490 4.785376 AGGACATATGGGAGGAATATGGAC 59.215 45.833 7.80 1.68 40.72 4.02
2795 3519 1.827789 ACTGGTGGCGTGCAACAAT 60.828 52.632 1.20 0.00 35.74 2.71
2912 3636 7.167535 TGAACATTGAACTGATACTGAATCCA 58.832 34.615 0.00 0.00 33.22 3.41
2913 3637 7.615582 TGAACATTGAACTGATACTGAATCC 57.384 36.000 0.00 0.00 33.22 3.01
2936 3660 8.653338 GTGTTCATTTCCAGATTGATGAATTTG 58.347 33.333 0.00 0.00 39.74 2.32
2940 3664 6.264970 TGTGTGTTCATTTCCAGATTGATGAA 59.735 34.615 0.00 0.00 36.47 2.57
2964 3688 5.202640 CAATACAAGATGCGACATGATGTG 58.797 41.667 1.23 0.00 0.00 3.21
2975 3699 4.305769 TGGCAAACAACAATACAAGATGC 58.694 39.130 0.00 0.00 0.00 3.91
2997 3721 7.645058 ATGGGTAATTTCTTTGATCGTGATT 57.355 32.000 0.00 0.00 0.00 2.57
2998 3722 7.339212 TCAATGGGTAATTTCTTTGATCGTGAT 59.661 33.333 0.00 0.00 0.00 3.06
3004 3728 8.472413 CACTGATCAATGGGTAATTTCTTTGAT 58.528 33.333 0.00 12.55 39.12 2.57
3055 3779 1.128692 GTGCGTCCAAATCCGAGAAAG 59.871 52.381 0.00 0.00 0.00 2.62
3062 3786 3.810896 GGCCGTGCGTCCAAATCC 61.811 66.667 0.00 0.00 0.00 3.01
3112 3836 4.228567 TGGTGTTGCTGCCGTCGA 62.229 61.111 0.00 0.00 0.00 4.20
3139 3863 1.000521 CCCTTCCTCTGCATTGCCA 60.001 57.895 6.12 0.00 0.00 4.92
3148 3872 2.297129 GCAGTGCTCCCCTTCCTCT 61.297 63.158 8.18 0.00 0.00 3.69
3185 3909 1.731257 GTAGATGCTCCGCGCTAGC 60.731 63.158 20.88 20.88 40.11 3.42
3186 3910 1.081108 GGTAGATGCTCCGCGCTAG 60.081 63.158 5.56 3.75 40.11 3.42
3187 3911 1.796190 CTGGTAGATGCTCCGCGCTA 61.796 60.000 5.56 0.00 40.11 4.26
3188 3912 3.144120 CTGGTAGATGCTCCGCGCT 62.144 63.158 5.56 0.00 40.11 5.92
3189 3913 2.659897 CTGGTAGATGCTCCGCGC 60.660 66.667 0.00 0.00 39.77 6.86
3190 3914 2.028190 CCTGGTAGATGCTCCGCG 59.972 66.667 0.00 0.00 0.00 6.46
3191 3915 2.280457 GCCTGGTAGATGCTCCGC 60.280 66.667 0.00 0.00 0.00 5.54
3192 3916 2.028190 CGCCTGGTAGATGCTCCG 59.972 66.667 0.00 0.00 0.00 4.63
3193 3917 2.423446 CCGCCTGGTAGATGCTCC 59.577 66.667 0.00 0.00 0.00 4.70
3194 3918 2.134287 TCCCGCCTGGTAGATGCTC 61.134 63.158 0.00 0.00 34.77 4.26
3195 3919 2.041922 TCCCGCCTGGTAGATGCT 60.042 61.111 0.00 0.00 34.77 3.79
3196 3920 1.113517 TAGTCCCGCCTGGTAGATGC 61.114 60.000 0.00 0.00 34.77 3.91
3197 3921 0.962489 CTAGTCCCGCCTGGTAGATG 59.038 60.000 0.00 0.00 34.77 2.90
3198 3922 0.851469 TCTAGTCCCGCCTGGTAGAT 59.149 55.000 0.00 0.00 34.77 1.98
3199 3923 0.106819 GTCTAGTCCCGCCTGGTAGA 60.107 60.000 0.00 0.00 34.77 2.59
3200 3924 0.395311 TGTCTAGTCCCGCCTGGTAG 60.395 60.000 0.00 0.00 34.77 3.18
3201 3925 0.040058 TTGTCTAGTCCCGCCTGGTA 59.960 55.000 0.00 0.00 34.77 3.25
3202 3926 1.229082 TTGTCTAGTCCCGCCTGGT 60.229 57.895 0.00 0.00 34.77 4.00
3203 3927 1.218316 GTTGTCTAGTCCCGCCTGG 59.782 63.158 0.00 0.00 0.00 4.45
3204 3928 1.153823 CGTTGTCTAGTCCCGCCTG 60.154 63.158 0.00 0.00 0.00 4.85
3205 3929 2.348888 CCGTTGTCTAGTCCCGCCT 61.349 63.158 0.00 0.00 0.00 5.52
3206 3930 2.183555 CCGTTGTCTAGTCCCGCC 59.816 66.667 0.00 0.00 0.00 6.13
3207 3931 2.183555 CCCGTTGTCTAGTCCCGC 59.816 66.667 0.00 0.00 0.00 6.13
3208 3932 0.679002 TCTCCCGTTGTCTAGTCCCG 60.679 60.000 0.00 0.00 0.00 5.14
3209 3933 1.104630 CTCTCCCGTTGTCTAGTCCC 58.895 60.000 0.00 0.00 0.00 4.46
3210 3934 0.456628 GCTCTCCCGTTGTCTAGTCC 59.543 60.000 0.00 0.00 0.00 3.85
3211 3935 1.133407 CTGCTCTCCCGTTGTCTAGTC 59.867 57.143 0.00 0.00 0.00 2.59
3212 3936 1.178276 CTGCTCTCCCGTTGTCTAGT 58.822 55.000 0.00 0.00 0.00 2.57
3213 3937 0.179124 GCTGCTCTCCCGTTGTCTAG 60.179 60.000 0.00 0.00 0.00 2.43
3214 3938 1.605058 GGCTGCTCTCCCGTTGTCTA 61.605 60.000 0.00 0.00 0.00 2.59
3215 3939 2.659610 GCTGCTCTCCCGTTGTCT 59.340 61.111 0.00 0.00 0.00 3.41
3216 3940 2.435059 GGCTGCTCTCCCGTTGTC 60.435 66.667 0.00 0.00 0.00 3.18
3217 3941 4.021925 GGGCTGCTCTCCCGTTGT 62.022 66.667 0.00 0.00 33.43 3.32
3242 3966 3.345808 CTGGTCCGTTGCACACCG 61.346 66.667 0.00 0.00 32.27 4.94
3243 3967 3.660111 GCTGGTCCGTTGCACACC 61.660 66.667 0.00 0.00 0.00 4.16
3244 3968 2.896801 CTGCTGGTCCGTTGCACAC 61.897 63.158 0.00 0.00 32.91 3.82
3245 3969 2.591429 CTGCTGGTCCGTTGCACA 60.591 61.111 0.00 0.00 32.91 4.57
3246 3970 1.724582 AAACTGCTGGTCCGTTGCAC 61.725 55.000 0.00 0.00 32.91 4.57
3247 3971 1.034838 AAAACTGCTGGTCCGTTGCA 61.035 50.000 4.36 4.36 35.30 4.08
3248 3972 0.102300 AAAAACTGCTGGTCCGTTGC 59.898 50.000 0.00 0.00 0.00 4.17
3249 3973 1.403679 TCAAAAACTGCTGGTCCGTTG 59.596 47.619 0.00 0.00 0.00 4.10
3250 3974 1.757682 TCAAAAACTGCTGGTCCGTT 58.242 45.000 0.00 0.00 0.00 4.44
3251 3975 1.981256 ATCAAAAACTGCTGGTCCGT 58.019 45.000 0.00 0.00 0.00 4.69
3252 3976 3.004734 AGAAATCAAAAACTGCTGGTCCG 59.995 43.478 0.00 0.00 0.00 4.79
3253 3977 4.590850 AGAAATCAAAAACTGCTGGTCC 57.409 40.909 0.00 0.00 0.00 4.46
3254 3978 4.676924 CGAAGAAATCAAAAACTGCTGGTC 59.323 41.667 0.00 0.00 0.00 4.02
3255 3979 4.610945 CGAAGAAATCAAAAACTGCTGGT 58.389 39.130 0.00 0.00 0.00 4.00
3256 3980 3.426525 GCGAAGAAATCAAAAACTGCTGG 59.573 43.478 0.00 0.00 0.00 4.85
3257 3981 4.043750 TGCGAAGAAATCAAAAACTGCTG 58.956 39.130 0.00 0.00 0.00 4.41
3258 3982 4.044426 GTGCGAAGAAATCAAAAACTGCT 58.956 39.130 0.00 0.00 0.00 4.24
3259 3983 3.796178 TGTGCGAAGAAATCAAAAACTGC 59.204 39.130 0.00 0.00 0.00 4.40
3260 3984 4.442073 CCTGTGCGAAGAAATCAAAAACTG 59.558 41.667 0.00 0.00 0.00 3.16
3261 3985 4.338118 TCCTGTGCGAAGAAATCAAAAACT 59.662 37.500 0.00 0.00 0.00 2.66
3262 3986 4.606961 TCCTGTGCGAAGAAATCAAAAAC 58.393 39.130 0.00 0.00 0.00 2.43
3263 3987 4.792704 GCTCCTGTGCGAAGAAATCAAAAA 60.793 41.667 0.00 0.00 0.00 1.94
3264 3988 3.304659 GCTCCTGTGCGAAGAAATCAAAA 60.305 43.478 0.00 0.00 0.00 2.44
3265 3989 2.226437 GCTCCTGTGCGAAGAAATCAAA 59.774 45.455 0.00 0.00 0.00 2.69
3266 3990 1.806542 GCTCCTGTGCGAAGAAATCAA 59.193 47.619 0.00 0.00 0.00 2.57
3267 3991 1.270785 TGCTCCTGTGCGAAGAAATCA 60.271 47.619 0.00 0.00 35.36 2.57
3268 3992 1.442769 TGCTCCTGTGCGAAGAAATC 58.557 50.000 0.00 0.00 35.36 2.17
3269 3993 1.741706 CATGCTCCTGTGCGAAGAAAT 59.258 47.619 0.00 0.00 35.36 2.17
3270 3994 1.159285 CATGCTCCTGTGCGAAGAAA 58.841 50.000 0.00 0.00 35.36 2.52
3271 3995 0.674581 CCATGCTCCTGTGCGAAGAA 60.675 55.000 0.00 0.00 35.36 2.52
3272 3996 1.078918 CCATGCTCCTGTGCGAAGA 60.079 57.895 0.00 0.00 35.36 2.87
3273 3997 2.110967 CCCATGCTCCTGTGCGAAG 61.111 63.158 0.00 0.00 35.36 3.79
3274 3998 2.046023 CCCATGCTCCTGTGCGAA 60.046 61.111 0.00 0.00 35.36 4.70
3275 3999 3.002583 TCCCATGCTCCTGTGCGA 61.003 61.111 0.00 0.00 35.36 5.10
3276 4000 2.321263 ATCTCCCATGCTCCTGTGCG 62.321 60.000 0.00 0.00 35.36 5.34
3277 4001 0.106819 AATCTCCCATGCTCCTGTGC 60.107 55.000 0.00 0.00 0.00 4.57
3278 4002 1.676746 CAATCTCCCATGCTCCTGTG 58.323 55.000 0.00 0.00 0.00 3.66
3279 4003 0.106819 GCAATCTCCCATGCTCCTGT 60.107 55.000 0.00 0.00 39.46 4.00
3280 4004 1.164662 CGCAATCTCCCATGCTCCTG 61.165 60.000 0.00 0.00 40.39 3.86
3281 4005 1.147824 CGCAATCTCCCATGCTCCT 59.852 57.895 0.00 0.00 40.39 3.69
3282 4006 0.883814 CTCGCAATCTCCCATGCTCC 60.884 60.000 0.00 0.00 40.39 4.70
3283 4007 0.883814 CCTCGCAATCTCCCATGCTC 60.884 60.000 0.00 0.00 40.39 4.26
3284 4008 1.147824 CCTCGCAATCTCCCATGCT 59.852 57.895 0.00 0.00 40.39 3.79
3285 4009 2.550101 GCCTCGCAATCTCCCATGC 61.550 63.158 0.00 0.00 39.17 4.06
3286 4010 2.249535 CGCCTCGCAATCTCCCATG 61.250 63.158 0.00 0.00 0.00 3.66
3287 4011 2.109799 CGCCTCGCAATCTCCCAT 59.890 61.111 0.00 0.00 0.00 4.00
3288 4012 4.161295 CCGCCTCGCAATCTCCCA 62.161 66.667 0.00 0.00 0.00 4.37
3308 4032 2.356913 TCCGTCCACGCACATGTG 60.357 61.111 21.83 21.83 39.60 3.21
3309 4033 2.048222 CTCCGTCCACGCACATGT 60.048 61.111 0.00 0.00 38.18 3.21
3310 4034 2.815211 CCTCCGTCCACGCACATG 60.815 66.667 0.00 0.00 38.18 3.21
3311 4035 2.994995 TCCTCCGTCCACGCACAT 60.995 61.111 0.00 0.00 38.18 3.21
3312 4036 3.680786 CTCCTCCGTCCACGCACA 61.681 66.667 0.00 0.00 38.18 4.57
3313 4037 2.927580 TTCTCCTCCGTCCACGCAC 61.928 63.158 0.00 0.00 38.18 5.34
3314 4038 2.599281 TTCTCCTCCGTCCACGCA 60.599 61.111 0.00 0.00 38.18 5.24
3315 4039 2.126031 GTTCTCCTCCGTCCACGC 60.126 66.667 0.00 0.00 38.18 5.34
3316 4040 1.213013 CAGTTCTCCTCCGTCCACG 59.787 63.158 0.00 0.00 39.44 4.94
3317 4041 1.592223 CCAGTTCTCCTCCGTCCAC 59.408 63.158 0.00 0.00 0.00 4.02
3318 4042 1.609501 CCCAGTTCTCCTCCGTCCA 60.610 63.158 0.00 0.00 0.00 4.02
3319 4043 2.359967 CCCCAGTTCTCCTCCGTCC 61.360 68.421 0.00 0.00 0.00 4.79
3320 4044 2.359967 CCCCCAGTTCTCCTCCGTC 61.360 68.421 0.00 0.00 0.00 4.79
3321 4045 2.284699 CCCCCAGTTCTCCTCCGT 60.285 66.667 0.00 0.00 0.00 4.69
3322 4046 2.038975 TCCCCCAGTTCTCCTCCG 59.961 66.667 0.00 0.00 0.00 4.63
3323 4047 1.690985 CCTCCCCCAGTTCTCCTCC 60.691 68.421 0.00 0.00 0.00 4.30
3324 4048 1.690985 CCCTCCCCCAGTTCTCCTC 60.691 68.421 0.00 0.00 0.00 3.71
3325 4049 2.456840 CCCTCCCCCAGTTCTCCT 59.543 66.667 0.00 0.00 0.00 3.69
3326 4050 1.996187 GACCCTCCCCCAGTTCTCC 60.996 68.421 0.00 0.00 0.00 3.71
3327 4051 2.359967 CGACCCTCCCCCAGTTCTC 61.360 68.421 0.00 0.00 0.00 2.87
3328 4052 2.284699 CGACCCTCCCCCAGTTCT 60.285 66.667 0.00 0.00 0.00 3.01
3329 4053 4.097361 GCGACCCTCCCCCAGTTC 62.097 72.222 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.