Multiple sequence alignment - TraesCS7A01G205400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G205400 chr7A 100.000 5230 0 0 1 5230 167679397 167684626 0.000000e+00 9659.0
1 TraesCS7A01G205400 chr7A 92.990 913 38 8 1067 1965 167736246 167735346 0.000000e+00 1308.0
2 TraesCS7A01G205400 chr7A 94.004 567 33 1 4665 5230 591628879 591628313 0.000000e+00 857.0
3 TraesCS7A01G205400 chr7A 83.808 562 87 4 4671 5230 510616571 510617130 9.970000e-147 531.0
4 TraesCS7A01G205400 chr7A 81.282 390 44 18 414 792 167736894 167736523 6.630000e-74 289.0
5 TraesCS7A01G205400 chr7A 87.190 242 29 2 2783 3022 167734063 167733822 1.860000e-69 274.0
6 TraesCS7A01G205400 chr7A 77.694 399 62 19 3602 3988 167733306 167732923 8.820000e-53 219.0
7 TraesCS7A01G205400 chr7A 82.573 241 27 11 2055 2283 632668936 632669173 1.150000e-46 198.0
8 TraesCS7A01G205400 chr7A 81.974 233 27 11 2062 2283 406081724 406081952 3.220000e-42 183.0
9 TraesCS7A01G205400 chr7B 91.508 1990 106 36 1 1948 130119470 130121438 0.000000e+00 2680.0
10 TraesCS7A01G205400 chr7B 94.647 878 24 6 1097 1963 130504069 130503204 0.000000e+00 1339.0
11 TraesCS7A01G205400 chr7B 89.130 552 48 6 2520 3066 130121873 130122417 0.000000e+00 676.0
12 TraesCS7A01G205400 chr7B 93.023 430 25 3 3146 3574 130124794 130125219 1.600000e-174 623.0
13 TraesCS7A01G205400 chr7B 83.929 672 66 24 3979 4627 130125652 130126304 5.790000e-169 604.0
14 TraesCS7A01G205400 chr7B 82.265 671 84 24 3979 4627 130187134 130187791 9.900000e-152 547.0
15 TraesCS7A01G205400 chr7B 90.148 406 37 3 3583 3988 130125194 130125596 4.640000e-145 525.0
16 TraesCS7A01G205400 chr7B 89.776 313 31 1 3676 3988 130186770 130187081 2.930000e-107 399.0
17 TraesCS7A01G205400 chr7B 84.750 400 45 9 1136 1527 609704071 609704462 2.280000e-103 387.0
18 TraesCS7A01G205400 chr7B 83.763 388 53 6 2644 3022 130502584 130502198 4.980000e-95 359.0
19 TraesCS7A01G205400 chr7B 80.668 419 42 27 386 792 130505030 130504639 6.630000e-74 289.0
20 TraesCS7A01G205400 chr7B 77.444 399 63 17 3602 3988 130501754 130501371 4.100000e-51 213.0
21 TraesCS7A01G205400 chr7B 92.958 142 9 1 3434 3574 130186580 130186721 6.870000e-49 206.0
22 TraesCS7A01G205400 chr7B 83.043 230 31 7 2061 2283 674235349 674235121 8.880000e-48 202.0
23 TraesCS7A01G205400 chr7B 85.417 96 9 4 1971 2065 130503133 130503042 1.550000e-15 95.3
24 TraesCS7A01G205400 chr7B 89.362 47 5 0 2474 2520 22070656 22070702 5.660000e-05 60.2
25 TraesCS7A01G205400 chr7D 90.887 1668 75 38 344 1963 165943833 165945471 0.000000e+00 2167.0
26 TraesCS7A01G205400 chr7D 93.391 1044 41 8 901 1942 166204511 166203494 0.000000e+00 1520.0
27 TraesCS7A01G205400 chr7D 85.223 1076 76 33 3606 4632 165947481 165948522 0.000000e+00 1029.0
28 TraesCS7A01G205400 chr7D 82.410 830 79 33 2378 3194 165946071 165946846 0.000000e+00 662.0
29 TraesCS7A01G205400 chr7D 93.684 285 17 1 3288 3571 165946840 165947124 4.840000e-115 425.0
30 TraesCS7A01G205400 chr7D 86.534 401 26 15 1 397 165943476 165943852 2.910000e-112 416.0
31 TraesCS7A01G205400 chr7D 81.854 507 69 19 2520 3022 166202968 166202481 6.310000e-109 405.0
32 TraesCS7A01G205400 chr7D 79.250 400 56 23 3602 3988 166202033 166201648 2.420000e-63 254.0
33 TraesCS7A01G205400 chr7D 89.815 108 8 2 402 506 166205197 166205090 9.140000e-28 135.0
34 TraesCS7A01G205400 chr7D 89.362 47 5 0 2474 2520 75938515 75938561 5.660000e-05 60.2
35 TraesCS7A01G205400 chr5D 96.113 566 22 0 4665 5230 500877952 500877387 0.000000e+00 924.0
36 TraesCS7A01G205400 chr5D 92.920 565 39 1 4667 5230 507909547 507908983 0.000000e+00 821.0
37 TraesCS7A01G205400 chr3A 91.379 580 36 2 4665 5230 243877161 243877740 0.000000e+00 782.0
38 TraesCS7A01G205400 chr3A 97.059 34 1 0 2488 2521 54123616 54123583 2.030000e-04 58.4
39 TraesCS7A01G205400 chr3A 94.595 37 2 0 2481 2517 657230471 657230435 2.030000e-04 58.4
40 TraesCS7A01G205400 chr3A 90.476 42 3 1 2472 2512 374433095 374433136 3.000000e-03 54.7
41 TraesCS7A01G205400 chr2D 91.234 559 48 1 4673 5230 509237440 509236882 0.000000e+00 760.0
42 TraesCS7A01G205400 chr2D 81.333 225 36 6 2061 2283 646053612 646053832 1.500000e-40 178.0
43 TraesCS7A01G205400 chr2D 79.565 230 33 10 2059 2278 435195887 435196112 9.070000e-33 152.0
44 TraesCS7A01G205400 chr6D 90.698 559 51 1 4673 5230 105956270 105955712 0.000000e+00 743.0
45 TraesCS7A01G205400 chr6D 80.224 536 72 21 1107 1610 382798510 382797977 6.400000e-99 372.0
46 TraesCS7A01G205400 chr2A 89.624 559 57 1 4673 5230 712518940 712518382 0.000000e+00 710.0
47 TraesCS7A01G205400 chr5A 86.607 560 75 0 4671 5230 549407645 549408204 2.070000e-173 619.0
48 TraesCS7A01G205400 chr5A 88.835 206 19 3 3291 3493 256240049 256239845 3.130000e-62 250.0
49 TraesCS7A01G205400 chr5A 95.349 43 2 0 2481 2523 439860382 439860340 9.400000e-08 69.4
50 TraesCS7A01G205400 chr6B 87.435 382 47 1 4671 5052 198447549 198447929 6.220000e-119 438.0
51 TraesCS7A01G205400 chr6B 79.963 534 72 20 1111 1610 573161732 573161200 1.380000e-95 361.0
52 TraesCS7A01G205400 chr6B 87.948 307 34 2 2827 3131 462306287 462306592 4.980000e-95 359.0
53 TraesCS7A01G205400 chr6B 89.524 210 17 4 3288 3493 462306637 462306845 1.440000e-65 261.0
54 TraesCS7A01G205400 chr6B 89.583 48 4 1 2473 2520 60597100 60597054 5.660000e-05 60.2
55 TraesCS7A01G205400 chr4B 86.327 373 42 7 2827 3194 638663343 638663711 1.060000e-106 398.0
56 TraesCS7A01G205400 chr4B 89.524 210 17 4 3288 3493 638663705 638663913 1.440000e-65 261.0
57 TraesCS7A01G205400 chr4B 95.000 40 2 0 2481 2520 178077917 178077878 4.370000e-06 63.9
58 TraesCS7A01G205400 chr6A 80.190 525 78 15 1111 1610 524868425 524867902 2.300000e-98 370.0
59 TraesCS7A01G205400 chr3B 84.409 372 52 5 2827 3194 602907361 602907730 1.380000e-95 361.0
60 TraesCS7A01G205400 chr1B 83.772 228 27 8 2061 2283 655062011 655061789 1.910000e-49 207.0
61 TraesCS7A01G205400 chr1A 80.769 234 31 10 2063 2283 575797674 575797442 2.500000e-38 171.0
62 TraesCS7A01G205400 chr2B 80.508 236 30 11 2060 2283 435682596 435682827 3.240000e-37 167.0
63 TraesCS7A01G205400 chr4A 79.498 239 38 6 2054 2283 346065233 346065469 5.420000e-35 159.0
64 TraesCS7A01G205400 chr4D 94.872 39 2 0 2481 2519 116276908 116276870 1.570000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G205400 chr7A 167679397 167684626 5229 False 9659.00 9659 100.0000 1 5230 1 chr7A.!!$F1 5229
1 TraesCS7A01G205400 chr7A 591628313 591628879 566 True 857.00 857 94.0040 4665 5230 1 chr7A.!!$R1 565
2 TraesCS7A01G205400 chr7A 510616571 510617130 559 False 531.00 531 83.8080 4671 5230 1 chr7A.!!$F3 559
3 TraesCS7A01G205400 chr7A 167732923 167736894 3971 True 522.50 1308 84.7890 414 3988 4 chr7A.!!$R2 3574
4 TraesCS7A01G205400 chr7B 130119470 130126304 6834 False 1021.60 2680 89.5476 1 4627 5 chr7B.!!$F3 4626
5 TraesCS7A01G205400 chr7B 130501371 130505030 3659 True 459.06 1339 84.3878 386 3988 5 chr7B.!!$R2 3602
6 TraesCS7A01G205400 chr7B 130186580 130187791 1211 False 384.00 547 88.3330 3434 4627 3 chr7B.!!$F4 1193
7 TraesCS7A01G205400 chr7D 165943476 165948522 5046 False 939.80 2167 87.7476 1 4632 5 chr7D.!!$F2 4631
8 TraesCS7A01G205400 chr7D 166201648 166205197 3549 True 578.50 1520 86.0775 402 3988 4 chr7D.!!$R1 3586
9 TraesCS7A01G205400 chr5D 500877387 500877952 565 True 924.00 924 96.1130 4665 5230 1 chr5D.!!$R1 565
10 TraesCS7A01G205400 chr5D 507908983 507909547 564 True 821.00 821 92.9200 4667 5230 1 chr5D.!!$R2 563
11 TraesCS7A01G205400 chr3A 243877161 243877740 579 False 782.00 782 91.3790 4665 5230 1 chr3A.!!$F1 565
12 TraesCS7A01G205400 chr2D 509236882 509237440 558 True 760.00 760 91.2340 4673 5230 1 chr2D.!!$R1 557
13 TraesCS7A01G205400 chr6D 105955712 105956270 558 True 743.00 743 90.6980 4673 5230 1 chr6D.!!$R1 557
14 TraesCS7A01G205400 chr6D 382797977 382798510 533 True 372.00 372 80.2240 1107 1610 1 chr6D.!!$R2 503
15 TraesCS7A01G205400 chr2A 712518382 712518940 558 True 710.00 710 89.6240 4673 5230 1 chr2A.!!$R1 557
16 TraesCS7A01G205400 chr5A 549407645 549408204 559 False 619.00 619 86.6070 4671 5230 1 chr5A.!!$F1 559
17 TraesCS7A01G205400 chr6B 573161200 573161732 532 True 361.00 361 79.9630 1111 1610 1 chr6B.!!$R2 499
18 TraesCS7A01G205400 chr6B 462306287 462306845 558 False 310.00 359 88.7360 2827 3493 2 chr6B.!!$F2 666
19 TraesCS7A01G205400 chr4B 638663343 638663913 570 False 329.50 398 87.9255 2827 3493 2 chr4B.!!$F1 666
20 TraesCS7A01G205400 chr6A 524867902 524868425 523 True 370.00 370 80.1900 1111 1610 1 chr6A.!!$R1 499

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
187 190 0.031585 ACTAGCACGAGCACGAACAA 59.968 50.0 11.40 0.00 45.49 2.83 F
954 1553 0.179233 GCTCGCCCGTTTTAAACTCG 60.179 55.0 6.27 6.90 0.00 4.18 F
2117 3134 0.036952 CACGCCAACACTCATCCTCT 60.037 55.0 0.00 0.00 0.00 3.69 F
2669 4020 0.036010 GATACGCCATGGGATCCCTG 60.036 60.0 31.05 23.84 36.94 4.45 F
3285 7484 0.038159 AAGAAACAGGCCGAGAGTCG 60.038 55.0 0.00 0.00 40.07 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2097 3114 0.320771 GAGGATGAGTGTTGGCGTGT 60.321 55.0 0.00 0.0 0.00 4.49 R
2191 3208 0.098200 CTACGAGGCGTCAACGATGA 59.902 55.0 12.92 0.0 41.54 2.92 R
3962 8581 0.318762 ACTTCAGGTGGACGAGAAGC 59.681 55.0 0.00 0.0 38.70 3.86 R
4135 8836 0.029834 CAGCAATGTTATCGCAGGCC 59.970 55.0 0.00 0.0 0.00 5.19 R
4880 9616 0.683504 GGGACTTCTCACCGCTAGGA 60.684 60.0 0.00 0.0 41.02 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 83 3.514539 TGAGACCCCCTCATGATCATAG 58.485 50.000 8.15 6.55 46.38 2.23
87 89 3.176411 CCCCTCATGATCATAGCACCTA 58.824 50.000 8.15 0.00 0.00 3.08
176 179 2.155194 GTCGAGCAGCACTAGCACG 61.155 63.158 0.00 0.00 45.25 5.34
187 190 0.031585 ACTAGCACGAGCACGAACAA 59.968 50.000 11.40 0.00 45.49 2.83
237 241 1.131638 TCCCCATCAATTCTCCTCCG 58.868 55.000 0.00 0.00 0.00 4.63
252 256 3.470888 CCGTCCCCGCCATTCTCT 61.471 66.667 0.00 0.00 0.00 3.10
257 261 4.473520 CCCGCCATTCTCTGCCGT 62.474 66.667 0.00 0.00 0.00 5.68
261 265 1.375908 GCCATTCTCTGCCGTGACA 60.376 57.895 0.00 0.00 0.00 3.58
357 361 6.539324 GTTTGCTAGCACGTTAAATATGACA 58.461 36.000 19.17 0.00 0.00 3.58
365 369 7.855545 AGCACGTTAAATATGACATGATCTTC 58.144 34.615 0.00 0.00 0.00 2.87
465 504 2.443958 AAGGCTCTGGCTTATTTCCC 57.556 50.000 4.55 0.00 46.45 3.97
568 618 3.043713 TTCTGCACAGCCGAAGCG 61.044 61.111 0.00 0.00 46.67 4.68
679 751 4.792704 GCGTTTTGCTTCTGAATCTGGAAA 60.793 41.667 0.00 0.00 41.73 3.13
687 759 2.093288 TCTGAATCTGGAAATGCGAGCT 60.093 45.455 0.00 0.00 0.00 4.09
688 760 2.681848 CTGAATCTGGAAATGCGAGCTT 59.318 45.455 0.00 0.00 0.00 3.74
689 761 3.872696 TGAATCTGGAAATGCGAGCTTA 58.127 40.909 0.00 0.00 0.00 3.09
690 762 4.260985 TGAATCTGGAAATGCGAGCTTAA 58.739 39.130 0.00 0.00 0.00 1.85
725 797 6.267070 GGTCAAAAACGTGTTTTCATCCTTA 58.733 36.000 10.83 0.00 41.45 2.69
726 798 6.197655 GGTCAAAAACGTGTTTTCATCCTTAC 59.802 38.462 10.83 0.00 41.45 2.34
727 799 6.970613 GTCAAAAACGTGTTTTCATCCTTACT 59.029 34.615 10.83 0.00 41.45 2.24
728 800 7.165318 GTCAAAAACGTGTTTTCATCCTTACTC 59.835 37.037 10.83 0.00 41.45 2.59
729 801 6.687081 AAAACGTGTTTTCATCCTTACTCA 57.313 33.333 4.93 0.00 38.27 3.41
730 802 6.877611 AAACGTGTTTTCATCCTTACTCAT 57.122 33.333 0.00 0.00 0.00 2.90
731 803 7.972832 AAACGTGTTTTCATCCTTACTCATA 57.027 32.000 0.00 0.00 0.00 2.15
732 804 6.963049 ACGTGTTTTCATCCTTACTCATAC 57.037 37.500 0.00 0.00 0.00 2.39
733 805 6.698380 ACGTGTTTTCATCCTTACTCATACT 58.302 36.000 0.00 0.00 0.00 2.12
734 806 6.812160 ACGTGTTTTCATCCTTACTCATACTC 59.188 38.462 0.00 0.00 0.00 2.59
757 1027 7.440556 ACTCTAGTTAATTAGACATGCATGCAG 59.559 37.037 26.69 19.15 0.00 4.41
794 1071 1.072965 CTCCTGCCTTCCACTTTCAGT 59.927 52.381 0.00 0.00 0.00 3.41
843 1140 8.597662 TGTAGAAAATAATACTGTATTCCCGC 57.402 34.615 15.84 4.74 0.00 6.13
844 1141 8.205512 TGTAGAAAATAATACTGTATTCCCGCA 58.794 33.333 15.84 0.00 0.00 5.69
845 1142 9.048446 GTAGAAAATAATACTGTATTCCCGCAA 57.952 33.333 15.84 0.00 0.00 4.85
846 1143 8.514330 AGAAAATAATACTGTATTCCCGCAAA 57.486 30.769 15.84 0.00 0.00 3.68
847 1144 8.962679 AGAAAATAATACTGTATTCCCGCAAAA 58.037 29.630 15.84 0.00 0.00 2.44
848 1145 9.575783 GAAAATAATACTGTATTCCCGCAAAAA 57.424 29.630 15.84 0.00 0.00 1.94
954 1553 0.179233 GCTCGCCCGTTTTAAACTCG 60.179 55.000 6.27 6.90 0.00 4.18
973 1581 2.192861 CACACCCCACACGCACAAT 61.193 57.895 0.00 0.00 0.00 2.71
1011 1637 3.485346 AACCGAACCCACGCACCAT 62.485 57.895 0.00 0.00 0.00 3.55
1015 1641 2.672996 AACCCACGCACCATCAGC 60.673 61.111 0.00 0.00 0.00 4.26
1028 1654 0.388659 CATCAGCGAAGAGGAGAGGG 59.611 60.000 0.00 0.00 0.00 4.30
1778 2486 3.644399 GAGTCCCAGGTTCGCCGTC 62.644 68.421 0.00 0.00 43.66 4.79
1811 2519 1.750018 TGCCAGGTTCATGATGCCG 60.750 57.895 0.00 0.00 0.00 5.69
1812 2520 1.451927 GCCAGGTTCATGATGCCGA 60.452 57.895 0.00 0.00 0.00 5.54
1813 2521 1.718757 GCCAGGTTCATGATGCCGAC 61.719 60.000 0.00 0.00 0.00 4.79
1987 2999 8.899427 ATGGTCTGAATCAAATCACTGTATAG 57.101 34.615 0.00 0.00 0.00 1.31
2057 3074 6.292150 AGTTTTGTGTGAAAGGGAAACAAAA 58.708 32.000 7.67 7.67 44.23 2.44
2059 3076 6.734104 TTTGTGTGAAAGGGAAACAAAATG 57.266 33.333 0.00 0.00 37.68 2.32
2084 3101 5.798015 TTTTTAACACAGTACAGACGCAA 57.202 34.783 0.00 0.00 0.00 4.85
2086 3103 1.217882 AACACAGTACAGACGCAAGC 58.782 50.000 0.00 0.00 45.62 4.01
2087 3104 0.939577 ACACAGTACAGACGCAAGCG 60.940 55.000 13.50 13.50 46.03 4.68
2088 3105 2.022129 ACAGTACAGACGCAAGCGC 61.022 57.895 15.09 0.00 44.19 5.92
2091 3108 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
2093 3110 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
2094 3111 0.803768 ACAGACGCAAGCGCTCATAG 60.804 55.000 12.06 5.40 44.19 2.23
2097 3114 0.999406 GACGCAAGCGCTCATAGAAA 59.001 50.000 12.06 0.00 44.19 2.52
2100 3117 1.527793 CGCAAGCGCTCATAGAAACAC 60.528 52.381 12.06 0.00 35.30 3.32
2101 3118 1.527793 GCAAGCGCTCATAGAAACACG 60.528 52.381 12.06 0.00 34.30 4.49
2102 3119 0.721718 AAGCGCTCATAGAAACACGC 59.278 50.000 12.06 0.00 46.20 5.34
2103 3120 1.084370 AGCGCTCATAGAAACACGCC 61.084 55.000 2.64 0.00 46.99 5.68
2104 3121 1.358725 GCGCTCATAGAAACACGCCA 61.359 55.000 0.00 0.00 40.43 5.69
2105 3122 1.075542 CGCTCATAGAAACACGCCAA 58.924 50.000 0.00 0.00 0.00 4.52
2106 3123 1.201921 CGCTCATAGAAACACGCCAAC 60.202 52.381 0.00 0.00 0.00 3.77
2107 3124 1.804151 GCTCATAGAAACACGCCAACA 59.196 47.619 0.00 0.00 0.00 3.33
2108 3125 2.412847 GCTCATAGAAACACGCCAACAC 60.413 50.000 0.00 0.00 0.00 3.32
2109 3126 3.067106 CTCATAGAAACACGCCAACACT 58.933 45.455 0.00 0.00 0.00 3.55
2110 3127 3.064207 TCATAGAAACACGCCAACACTC 58.936 45.455 0.00 0.00 0.00 3.51
2111 3128 2.605837 TAGAAACACGCCAACACTCA 57.394 45.000 0.00 0.00 0.00 3.41
2112 3129 1.967319 AGAAACACGCCAACACTCAT 58.033 45.000 0.00 0.00 0.00 2.90
2113 3130 1.873591 AGAAACACGCCAACACTCATC 59.126 47.619 0.00 0.00 0.00 2.92
2114 3131 0.951558 AAACACGCCAACACTCATCC 59.048 50.000 0.00 0.00 0.00 3.51
2115 3132 0.108585 AACACGCCAACACTCATCCT 59.891 50.000 0.00 0.00 0.00 3.24
2116 3133 0.320771 ACACGCCAACACTCATCCTC 60.321 55.000 0.00 0.00 0.00 3.71
2117 3134 0.036952 CACGCCAACACTCATCCTCT 60.037 55.000 0.00 0.00 0.00 3.69
2118 3135 1.204704 CACGCCAACACTCATCCTCTA 59.795 52.381 0.00 0.00 0.00 2.43
2119 3136 2.111384 ACGCCAACACTCATCCTCTAT 58.889 47.619 0.00 0.00 0.00 1.98
2120 3137 2.159043 ACGCCAACACTCATCCTCTATG 60.159 50.000 0.00 0.00 36.88 2.23
2121 3138 2.101415 CGCCAACACTCATCCTCTATGA 59.899 50.000 0.00 0.00 42.48 2.15
2122 3139 3.430790 CGCCAACACTCATCCTCTATGAA 60.431 47.826 0.00 0.00 44.05 2.57
2123 3140 3.873952 GCCAACACTCATCCTCTATGAAC 59.126 47.826 0.00 0.00 44.05 3.18
2124 3141 4.623886 GCCAACACTCATCCTCTATGAACA 60.624 45.833 0.00 0.00 44.05 3.18
2125 3142 4.872691 CCAACACTCATCCTCTATGAACAC 59.127 45.833 0.00 0.00 44.05 3.32
2126 3143 5.482006 CAACACTCATCCTCTATGAACACA 58.518 41.667 0.00 0.00 44.05 3.72
2127 3144 5.078411 ACACTCATCCTCTATGAACACAC 57.922 43.478 0.00 0.00 44.05 3.82
2128 3145 4.528206 ACACTCATCCTCTATGAACACACA 59.472 41.667 0.00 0.00 44.05 3.72
2129 3146 4.867047 CACTCATCCTCTATGAACACACAC 59.133 45.833 0.00 0.00 44.05 3.82
2130 3147 4.081420 ACTCATCCTCTATGAACACACACC 60.081 45.833 0.00 0.00 44.05 4.16
2131 3148 3.197766 TCATCCTCTATGAACACACACCC 59.802 47.826 0.00 0.00 41.75 4.61
2132 3149 2.902608 TCCTCTATGAACACACACCCT 58.097 47.619 0.00 0.00 0.00 4.34
2133 3150 4.055710 TCCTCTATGAACACACACCCTA 57.944 45.455 0.00 0.00 0.00 3.53
2134 3151 3.767673 TCCTCTATGAACACACACCCTAC 59.232 47.826 0.00 0.00 0.00 3.18
2135 3152 3.118738 CCTCTATGAACACACACCCTACC 60.119 52.174 0.00 0.00 0.00 3.18
2136 3153 2.835764 TCTATGAACACACACCCTACCC 59.164 50.000 0.00 0.00 0.00 3.69
2137 3154 0.696501 ATGAACACACACCCTACCCC 59.303 55.000 0.00 0.00 0.00 4.95
2138 3155 0.400815 TGAACACACACCCTACCCCT 60.401 55.000 0.00 0.00 0.00 4.79
2139 3156 1.132785 TGAACACACACCCTACCCCTA 60.133 52.381 0.00 0.00 0.00 3.53
2140 3157 2.193993 GAACACACACCCTACCCCTAT 58.806 52.381 0.00 0.00 0.00 2.57
2141 3158 1.580059 ACACACACCCTACCCCTATG 58.420 55.000 0.00 0.00 0.00 2.23
2142 3159 1.079825 ACACACACCCTACCCCTATGA 59.920 52.381 0.00 0.00 0.00 2.15
2143 3160 2.193127 CACACACCCTACCCCTATGAA 58.807 52.381 0.00 0.00 0.00 2.57
2144 3161 2.093128 CACACACCCTACCCCTATGAAC 60.093 54.545 0.00 0.00 0.00 3.18
2145 3162 2.193127 CACACCCTACCCCTATGAACA 58.807 52.381 0.00 0.00 0.00 3.18
2146 3163 2.093128 CACACCCTACCCCTATGAACAC 60.093 54.545 0.00 0.00 0.00 3.32
2147 3164 1.489230 CACCCTACCCCTATGAACACC 59.511 57.143 0.00 0.00 0.00 4.16
2148 3165 1.368558 ACCCTACCCCTATGAACACCT 59.631 52.381 0.00 0.00 0.00 4.00
2149 3166 2.047830 CCCTACCCCTATGAACACCTC 58.952 57.143 0.00 0.00 0.00 3.85
2150 3167 2.047830 CCTACCCCTATGAACACCTCC 58.952 57.143 0.00 0.00 0.00 4.30
2151 3168 2.628559 CCTACCCCTATGAACACCTCCA 60.629 54.545 0.00 0.00 0.00 3.86
2152 3169 2.053747 ACCCCTATGAACACCTCCAA 57.946 50.000 0.00 0.00 0.00 3.53
2153 3170 1.916181 ACCCCTATGAACACCTCCAAG 59.084 52.381 0.00 0.00 0.00 3.61
2154 3171 2.196595 CCCCTATGAACACCTCCAAGA 58.803 52.381 0.00 0.00 0.00 3.02
2155 3172 2.171448 CCCCTATGAACACCTCCAAGAG 59.829 54.545 0.00 0.00 0.00 2.85
2156 3173 3.107601 CCCTATGAACACCTCCAAGAGA 58.892 50.000 0.00 0.00 0.00 3.10
2157 3174 3.118592 CCCTATGAACACCTCCAAGAGAC 60.119 52.174 0.00 0.00 0.00 3.36
2158 3175 3.772025 CCTATGAACACCTCCAAGAGACT 59.228 47.826 0.00 0.00 0.00 3.24
2159 3176 4.956700 CCTATGAACACCTCCAAGAGACTA 59.043 45.833 0.00 0.00 0.00 2.59
2160 3177 5.422331 CCTATGAACACCTCCAAGAGACTAA 59.578 44.000 0.00 0.00 0.00 2.24
2161 3178 4.873746 TGAACACCTCCAAGAGACTAAG 57.126 45.455 0.00 0.00 0.00 2.18
2162 3179 3.006967 TGAACACCTCCAAGAGACTAAGC 59.993 47.826 0.00 0.00 0.00 3.09
2163 3180 1.903183 ACACCTCCAAGAGACTAAGCC 59.097 52.381 0.00 0.00 0.00 4.35
2164 3181 1.134965 CACCTCCAAGAGACTAAGCCG 60.135 57.143 0.00 0.00 0.00 5.52
2165 3182 1.272536 ACCTCCAAGAGACTAAGCCGA 60.273 52.381 0.00 0.00 0.00 5.54
2166 3183 2.035632 CCTCCAAGAGACTAAGCCGAT 58.964 52.381 0.00 0.00 0.00 4.18
2167 3184 3.223435 CCTCCAAGAGACTAAGCCGATA 58.777 50.000 0.00 0.00 0.00 2.92
2168 3185 3.829601 CCTCCAAGAGACTAAGCCGATAT 59.170 47.826 0.00 0.00 0.00 1.63
2169 3186 5.010933 CCTCCAAGAGACTAAGCCGATATA 58.989 45.833 0.00 0.00 0.00 0.86
2170 3187 5.654650 CCTCCAAGAGACTAAGCCGATATAT 59.345 44.000 0.00 0.00 0.00 0.86
2171 3188 6.183360 CCTCCAAGAGACTAAGCCGATATATC 60.183 46.154 2.34 2.34 0.00 1.63
2172 3189 6.246163 TCCAAGAGACTAAGCCGATATATCA 58.754 40.000 13.11 0.00 0.00 2.15
2173 3190 6.892456 TCCAAGAGACTAAGCCGATATATCAT 59.108 38.462 13.11 0.00 0.00 2.45
2174 3191 7.067615 TCCAAGAGACTAAGCCGATATATCATC 59.932 40.741 13.11 3.68 0.00 2.92
2175 3192 7.068103 CCAAGAGACTAAGCCGATATATCATCT 59.932 40.741 13.11 5.83 0.00 2.90
2176 3193 8.465999 CAAGAGACTAAGCCGATATATCATCTT 58.534 37.037 13.11 14.92 0.00 2.40
2177 3194 7.995289 AGAGACTAAGCCGATATATCATCTTG 58.005 38.462 19.08 13.78 0.00 3.02
2178 3195 7.831690 AGAGACTAAGCCGATATATCATCTTGA 59.168 37.037 19.08 8.49 0.00 3.02
2179 3196 7.995289 AGACTAAGCCGATATATCATCTTGAG 58.005 38.462 19.08 15.35 0.00 3.02
2180 3197 7.831690 AGACTAAGCCGATATATCATCTTGAGA 59.168 37.037 19.08 6.04 0.00 3.27
2181 3198 8.532186 ACTAAGCCGATATATCATCTTGAGAT 57.468 34.615 19.08 0.00 32.49 2.75
2182 3199 8.976353 ACTAAGCCGATATATCATCTTGAGATT 58.024 33.333 19.08 6.05 30.15 2.40
2183 3200 9.814899 CTAAGCCGATATATCATCTTGAGATTT 57.185 33.333 19.08 2.62 30.15 2.17
2186 3203 9.593134 AGCCGATATATCATCTTGAGATTTTAC 57.407 33.333 13.11 0.00 30.15 2.01
2187 3204 9.371136 GCCGATATATCATCTTGAGATTTTACA 57.629 33.333 13.11 0.00 30.15 2.41
2196 3213 8.659491 TCATCTTGAGATTTTACAAAGTCATCG 58.341 33.333 0.86 0.00 31.21 3.84
2197 3214 7.962964 TCTTGAGATTTTACAAAGTCATCGT 57.037 32.000 0.86 0.00 0.00 3.73
2198 3215 8.378172 TCTTGAGATTTTACAAAGTCATCGTT 57.622 30.769 0.86 0.00 0.00 3.85
2199 3216 8.282592 TCTTGAGATTTTACAAAGTCATCGTTG 58.717 33.333 0.86 0.00 38.59 4.10
2200 3217 7.722795 TGAGATTTTACAAAGTCATCGTTGA 57.277 32.000 0.00 0.00 36.74 3.18
2207 3224 3.374330 GTCATCGTTGACGCCTCG 58.626 61.111 10.66 0.00 42.66 4.63
2208 3225 1.443872 GTCATCGTTGACGCCTCGT 60.444 57.895 10.66 0.00 42.66 4.18
2209 3226 0.179181 GTCATCGTTGACGCCTCGTA 60.179 55.000 10.66 0.00 42.66 3.43
2210 3227 0.098200 TCATCGTTGACGCCTCGTAG 59.902 55.000 0.00 0.00 41.37 3.51
2211 3228 1.226603 ATCGTTGACGCCTCGTAGC 60.227 57.895 0.00 0.00 41.37 3.58
2212 3229 2.609183 ATCGTTGACGCCTCGTAGCC 62.609 60.000 0.00 0.00 41.37 3.93
2213 3230 2.260434 GTTGACGCCTCGTAGCCA 59.740 61.111 0.00 0.00 41.37 4.75
2214 3231 1.373748 GTTGACGCCTCGTAGCCAA 60.374 57.895 0.00 0.00 41.37 4.52
2215 3232 1.373748 TTGACGCCTCGTAGCCAAC 60.374 57.895 0.00 0.00 41.37 3.77
2233 3250 3.403276 CGAGAACGTCTCTTCCCAC 57.597 57.895 11.50 0.00 41.26 4.61
2234 3251 0.882474 CGAGAACGTCTCTTCCCACT 59.118 55.000 11.50 0.00 41.26 4.00
2235 3252 2.082231 CGAGAACGTCTCTTCCCACTA 58.918 52.381 11.50 0.00 41.26 2.74
2236 3253 2.486982 CGAGAACGTCTCTTCCCACTAA 59.513 50.000 11.50 0.00 41.26 2.24
2237 3254 3.057736 CGAGAACGTCTCTTCCCACTAAA 60.058 47.826 11.50 0.00 41.26 1.85
2238 3255 4.236147 GAGAACGTCTCTTCCCACTAAAC 58.764 47.826 0.00 0.00 40.30 2.01
2239 3256 2.719426 ACGTCTCTTCCCACTAAACG 57.281 50.000 0.00 0.00 35.00 3.60
2240 3257 1.959282 ACGTCTCTTCCCACTAAACGT 59.041 47.619 0.00 0.00 37.09 3.99
2241 3258 2.288030 ACGTCTCTTCCCACTAAACGTG 60.288 50.000 0.00 0.00 40.02 4.49
2242 3259 2.067013 GTCTCTTCCCACTAAACGTGC 58.933 52.381 0.00 0.00 42.42 5.34
2243 3260 1.689813 TCTCTTCCCACTAAACGTGCA 59.310 47.619 0.00 0.00 42.42 4.57
2244 3261 2.301870 TCTCTTCCCACTAAACGTGCAT 59.698 45.455 0.00 0.00 42.42 3.96
2245 3262 2.673368 CTCTTCCCACTAAACGTGCATC 59.327 50.000 0.00 0.00 42.42 3.91
2246 3263 1.393539 CTTCCCACTAAACGTGCATCG 59.606 52.381 7.07 7.07 42.42 3.84
2247 3264 1.017177 TCCCACTAAACGTGCATCGC 61.017 55.000 8.31 0.00 42.42 4.58
2248 3265 1.423845 CCACTAAACGTGCATCGCC 59.576 57.895 8.31 0.00 42.42 5.54
2249 3266 1.058748 CACTAAACGTGCATCGCCG 59.941 57.895 8.31 0.93 44.19 6.46
2250 3267 2.098233 ACTAAACGTGCATCGCCGG 61.098 57.895 0.00 0.00 44.19 6.13
2251 3268 1.807981 CTAAACGTGCATCGCCGGA 60.808 57.895 5.05 0.00 44.19 5.14
2252 3269 1.355796 CTAAACGTGCATCGCCGGAA 61.356 55.000 5.05 0.00 44.19 4.30
2253 3270 0.949588 TAAACGTGCATCGCCGGAAA 60.950 50.000 5.05 0.00 44.19 3.13
2254 3271 1.582610 AAACGTGCATCGCCGGAAAT 61.583 50.000 5.05 0.00 44.19 2.17
2255 3272 1.977594 AACGTGCATCGCCGGAAATC 61.978 55.000 5.05 0.00 44.19 2.17
2256 3273 2.715624 GTGCATCGCCGGAAATCC 59.284 61.111 5.05 0.00 0.00 3.01
2257 3274 1.819632 GTGCATCGCCGGAAATCCT 60.820 57.895 5.05 0.00 0.00 3.24
2258 3275 0.531974 GTGCATCGCCGGAAATCCTA 60.532 55.000 5.05 0.00 0.00 2.94
2259 3276 0.179234 TGCATCGCCGGAAATCCTAA 59.821 50.000 5.05 0.00 0.00 2.69
2260 3277 1.305201 GCATCGCCGGAAATCCTAAA 58.695 50.000 5.05 0.00 0.00 1.85
2261 3278 1.673920 GCATCGCCGGAAATCCTAAAA 59.326 47.619 5.05 0.00 0.00 1.52
2262 3279 2.293399 GCATCGCCGGAAATCCTAAAAT 59.707 45.455 5.05 0.00 0.00 1.82
2263 3280 3.500680 GCATCGCCGGAAATCCTAAAATA 59.499 43.478 5.05 0.00 0.00 1.40
2264 3281 4.023536 GCATCGCCGGAAATCCTAAAATAA 60.024 41.667 5.05 0.00 0.00 1.40
2265 3282 5.506649 GCATCGCCGGAAATCCTAAAATAAA 60.507 40.000 5.05 0.00 0.00 1.40
2266 3283 6.677913 CATCGCCGGAAATCCTAAAATAAAT 58.322 36.000 5.05 0.00 0.00 1.40
2267 3284 6.702716 TCGCCGGAAATCCTAAAATAAATT 57.297 33.333 5.05 0.00 0.00 1.82
2268 3285 7.102847 TCGCCGGAAATCCTAAAATAAATTT 57.897 32.000 5.05 0.00 34.92 1.82
2269 3286 8.223177 TCGCCGGAAATCCTAAAATAAATTTA 57.777 30.769 5.05 0.00 32.27 1.40
2270 3287 8.684520 TCGCCGGAAATCCTAAAATAAATTTAA 58.315 29.630 5.05 0.00 33.20 1.52
2271 3288 8.964150 CGCCGGAAATCCTAAAATAAATTTAAG 58.036 33.333 5.05 0.00 33.20 1.85
2303 3320 1.463674 ATCTCATTGCCCGGTCAAAC 58.536 50.000 0.24 0.00 0.00 2.93
2429 3681 1.141053 AGCGGATAAATGGTCCTCACC 59.859 52.381 0.00 0.00 44.10 4.02
2482 3736 7.907214 AAATTAGCTTCGACTAATTCACACT 57.093 32.000 16.86 3.82 46.93 3.55
2483 3737 6.893958 ATTAGCTTCGACTAATTCACACTG 57.106 37.500 0.00 0.00 39.31 3.66
2484 3738 2.996621 AGCTTCGACTAATTCACACTGC 59.003 45.455 0.00 0.00 0.00 4.40
2485 3739 2.094417 GCTTCGACTAATTCACACTGCC 59.906 50.000 0.00 0.00 0.00 4.85
2486 3740 3.589988 CTTCGACTAATTCACACTGCCT 58.410 45.455 0.00 0.00 0.00 4.75
2487 3741 3.232213 TCGACTAATTCACACTGCCTC 57.768 47.619 0.00 0.00 0.00 4.70
2488 3742 2.826128 TCGACTAATTCACACTGCCTCT 59.174 45.455 0.00 0.00 0.00 3.69
2489 3743 2.926200 CGACTAATTCACACTGCCTCTG 59.074 50.000 0.00 0.00 0.00 3.35
2493 3747 2.758736 ATTCACACTGCCTCTGTCTC 57.241 50.000 0.00 0.00 0.00 3.36
2495 3749 1.413118 TCACACTGCCTCTGTCTCAA 58.587 50.000 0.00 0.00 0.00 3.02
2496 3750 1.762370 TCACACTGCCTCTGTCTCAAA 59.238 47.619 0.00 0.00 0.00 2.69
2497 3751 2.170397 TCACACTGCCTCTGTCTCAAAA 59.830 45.455 0.00 0.00 0.00 2.44
2498 3752 3.144506 CACACTGCCTCTGTCTCAAAAT 58.855 45.455 0.00 0.00 0.00 1.82
2499 3753 4.040339 TCACACTGCCTCTGTCTCAAAATA 59.960 41.667 0.00 0.00 0.00 1.40
2500 3754 4.940046 CACACTGCCTCTGTCTCAAAATAT 59.060 41.667 0.00 0.00 0.00 1.28
2501 3755 6.070824 TCACACTGCCTCTGTCTCAAAATATA 60.071 38.462 0.00 0.00 0.00 0.86
2502 3756 6.595326 CACACTGCCTCTGTCTCAAAATATAA 59.405 38.462 0.00 0.00 0.00 0.98
2503 3757 6.820656 ACACTGCCTCTGTCTCAAAATATAAG 59.179 38.462 0.00 0.00 0.00 1.73
2504 3758 7.044181 CACTGCCTCTGTCTCAAAATATAAGA 58.956 38.462 0.00 0.00 0.00 2.10
2505 3759 7.010923 CACTGCCTCTGTCTCAAAATATAAGAC 59.989 40.741 0.00 0.00 39.87 3.01
2506 3760 6.042777 TGCCTCTGTCTCAAAATATAAGACG 58.957 40.000 0.00 0.00 41.84 4.18
2507 3761 6.043411 GCCTCTGTCTCAAAATATAAGACGT 58.957 40.000 0.00 0.00 41.84 4.34
2508 3762 6.535508 GCCTCTGTCTCAAAATATAAGACGTT 59.464 38.462 0.00 0.00 41.84 3.99
2509 3763 7.064728 GCCTCTGTCTCAAAATATAAGACGTTT 59.935 37.037 0.00 0.00 41.84 3.60
2510 3764 8.936864 CCTCTGTCTCAAAATATAAGACGTTTT 58.063 33.333 0.00 0.00 41.84 2.43
2513 3767 9.878599 CTGTCTCAAAATATAAGACGTTTTTGT 57.121 29.630 16.32 4.99 41.84 2.83
2540 3796 8.578308 TGCTAAACATAGCATGCAAATATTTC 57.422 30.769 21.98 4.82 46.94 2.17
2541 3797 8.196103 TGCTAAACATAGCATGCAAATATTTCA 58.804 29.630 21.98 7.17 46.94 2.69
2547 3803 5.511234 AGCATGCAAATATTTCACTCTCC 57.489 39.130 21.98 0.00 0.00 3.71
2553 3809 5.122239 TGCAAATATTTCACTCTCCTTCACG 59.878 40.000 0.00 0.00 0.00 4.35
2559 3815 0.600255 CACTCTCCTTCACGCGGTTT 60.600 55.000 12.47 0.00 0.00 3.27
2628 3885 9.223099 CATGCATATATCTTTGTTATGGACTGA 57.777 33.333 0.00 0.00 0.00 3.41
2629 3886 9.797642 ATGCATATATCTTTGTTATGGACTGAA 57.202 29.630 0.00 0.00 0.00 3.02
2638 3895 8.405531 TCTTTGTTATGGACTGAAAAGTCAAAG 58.594 33.333 8.06 0.00 40.38 2.77
2642 3993 4.836125 TGGACTGAAAAGTCAAAGCATC 57.164 40.909 8.06 0.00 40.38 3.91
2660 4011 4.453478 AGCATCAAATACTGATACGCCATG 59.547 41.667 0.00 0.00 43.28 3.66
2669 4020 0.036010 GATACGCCATGGGATCCCTG 60.036 60.000 31.05 23.84 36.94 4.45
2673 4024 2.818169 GCCATGGGATCCCTGCGTA 61.818 63.158 31.05 11.51 36.94 4.42
2675 4026 0.321919 CCATGGGATCCCTGCGTATG 60.322 60.000 31.05 23.48 36.94 2.39
2773 4138 3.859411 AGCGTGTTTTGAGGTTTTTCA 57.141 38.095 0.00 0.00 0.00 2.69
2774 4139 3.769536 AGCGTGTTTTGAGGTTTTTCAG 58.230 40.909 0.00 0.00 0.00 3.02
2820 4675 5.545063 TGTTGGCGATCAATTCTAGGATA 57.455 39.130 0.00 0.00 37.73 2.59
2821 4676 5.541845 TGTTGGCGATCAATTCTAGGATAG 58.458 41.667 0.00 0.00 37.62 2.08
2829 4684 6.349777 CGATCAATTCTAGGATAGGACTGGTC 60.350 46.154 0.00 0.00 39.78 4.02
2887 4743 6.322712 ACTCCTACTTGAATATCTGGAGACAC 59.677 42.308 12.33 0.00 41.31 3.67
2899 4755 3.574396 TCTGGAGACACGAGACAATTCTT 59.426 43.478 0.00 0.00 35.60 2.52
2905 4761 6.424207 GGAGACACGAGACAATTCTTAGTTTT 59.576 38.462 0.00 0.00 29.47 2.43
2920 4776 1.686052 AGTTTTTGGCTGCGGATGAAA 59.314 42.857 0.00 0.00 0.00 2.69
2927 4783 1.303309 GCTGCGGATGAAACATAGCT 58.697 50.000 0.00 0.00 0.00 3.32
2948 4811 4.764823 GCTGTAGCAGTCATAGATCTACCT 59.235 45.833 4.10 0.00 41.59 3.08
3025 4891 4.488126 TGTCAACAGATTTTAGCACAGC 57.512 40.909 0.00 0.00 0.00 4.40
3040 4906 1.131883 CACAGCAAGTCAGCAATAGCC 59.868 52.381 0.00 0.00 43.56 3.93
3047 4913 1.630369 AGTCAGCAATAGCCCTGTTCA 59.370 47.619 0.00 0.00 43.56 3.18
3067 4933 7.703328 TGTTCAATCTTCAACCTAAAACTGTC 58.297 34.615 0.00 0.00 0.00 3.51
3077 4943 2.725723 CCTAAAACTGTCGCGTTTCGTA 59.274 45.455 5.77 0.00 36.16 3.43
3078 4944 2.916735 AAAACTGTCGCGTTTCGTAG 57.083 45.000 5.77 0.00 36.16 3.51
3093 4959 6.293626 GCGTTTCGTAGTATGGATAGTCCTTA 60.294 42.308 0.00 0.00 37.46 2.69
3094 4960 7.296660 CGTTTCGTAGTATGGATAGTCCTTAG 58.703 42.308 0.00 0.00 37.46 2.18
3131 4997 0.674895 GCAGCCATTCTGACGTTCCT 60.675 55.000 0.00 0.00 45.72 3.36
3147 5013 6.816640 TGACGTTCCTTCCACATTTCTAATAG 59.183 38.462 0.00 0.00 0.00 1.73
3244 7440 8.028938 CCATTTCAAAACATTAGAAGTACCTGG 58.971 37.037 0.00 0.00 0.00 4.45
3245 7441 8.792633 CATTTCAAAACATTAGAAGTACCTGGA 58.207 33.333 0.00 0.00 0.00 3.86
3246 7442 8.934023 TTTCAAAACATTAGAAGTACCTGGAT 57.066 30.769 0.00 0.00 0.00 3.41
3247 7443 8.934023 TTCAAAACATTAGAAGTACCTGGATT 57.066 30.769 0.00 0.00 0.00 3.01
3285 7484 0.038159 AAGAAACAGGCCGAGAGTCG 60.038 55.000 0.00 0.00 40.07 4.18
3298 7497 1.065401 GAGAGTCGCATCTCTGACCAG 59.935 57.143 11.57 0.00 43.74 4.00
3310 7509 2.262915 GACCAGGTGTCCAGAGCG 59.737 66.667 0.00 0.00 38.09 5.03
3313 7513 1.979155 CCAGGTGTCCAGAGCGAGA 60.979 63.158 0.00 0.00 0.00 4.04
3385 7589 2.025321 CCCATTAGTGTACCTTTGGGCT 60.025 50.000 13.92 0.00 38.11 5.19
3432 7638 8.863086 ACTAATGTACTGTCAACTTACTGGTTA 58.137 33.333 0.00 0.00 0.00 2.85
3520 7728 1.883084 GCAGGCGACGGTTAGATGG 60.883 63.158 0.00 0.00 0.00 3.51
3574 7852 4.226168 CCAGGGGAACTATCTCTTTGAAGT 59.774 45.833 0.00 0.00 0.00 3.01
3575 7853 5.280727 CCAGGGGAACTATCTCTTTGAAGTT 60.281 44.000 0.00 0.00 34.96 2.66
3576 7854 5.877564 CAGGGGAACTATCTCTTTGAAGTTC 59.122 44.000 5.68 5.68 44.51 3.01
3577 7855 5.788014 AGGGGAACTATCTCTTTGAAGTTCT 59.212 40.000 12.31 0.00 44.60 3.01
3578 7856 6.273495 AGGGGAACTATCTCTTTGAAGTTCTT 59.727 38.462 12.31 0.00 44.60 2.52
3579 7857 6.943146 GGGGAACTATCTCTTTGAAGTTCTTT 59.057 38.462 12.31 0.00 44.60 2.52
3580 7858 7.094592 GGGGAACTATCTCTTTGAAGTTCTTTG 60.095 40.741 12.31 0.00 44.60 2.77
3581 7859 7.445707 GGGAACTATCTCTTTGAAGTTCTTTGT 59.554 37.037 12.31 0.00 44.60 2.83
3582 7860 8.841300 GGAACTATCTCTTTGAAGTTCTTTGTT 58.159 33.333 12.31 0.00 44.60 2.83
3587 7865 7.581011 TCTCTTTGAAGTTCTTTGTTTTTGC 57.419 32.000 4.17 0.00 0.00 3.68
3588 7866 6.307800 TCTCTTTGAAGTTCTTTGTTTTTGCG 59.692 34.615 4.17 0.00 0.00 4.85
3589 7867 5.347364 TCTTTGAAGTTCTTTGTTTTTGCGG 59.653 36.000 4.17 0.00 0.00 5.69
3590 7868 3.516615 TGAAGTTCTTTGTTTTTGCGGG 58.483 40.909 4.17 0.00 0.00 6.13
3591 7869 3.056465 TGAAGTTCTTTGTTTTTGCGGGT 60.056 39.130 4.17 0.00 0.00 5.28
3592 7870 4.158025 TGAAGTTCTTTGTTTTTGCGGGTA 59.842 37.500 4.17 0.00 0.00 3.69
3593 7871 4.722361 AGTTCTTTGTTTTTGCGGGTAA 57.278 36.364 0.00 0.00 0.00 2.85
3594 7872 4.426416 AGTTCTTTGTTTTTGCGGGTAAC 58.574 39.130 0.00 0.00 0.00 2.50
3595 7873 4.158949 AGTTCTTTGTTTTTGCGGGTAACT 59.841 37.500 0.00 0.00 0.00 2.24
3596 7874 5.357596 AGTTCTTTGTTTTTGCGGGTAACTA 59.642 36.000 0.00 0.00 0.00 2.24
3597 7875 6.040054 AGTTCTTTGTTTTTGCGGGTAACTAT 59.960 34.615 0.00 0.00 0.00 2.12
3598 7876 6.004408 TCTTTGTTTTTGCGGGTAACTATC 57.996 37.500 0.00 0.00 0.00 2.08
3599 7877 5.766174 TCTTTGTTTTTGCGGGTAACTATCT 59.234 36.000 0.00 0.00 0.00 1.98
3600 7878 5.616488 TTGTTTTTGCGGGTAACTATCTC 57.384 39.130 0.00 0.00 0.00 2.75
3642 8243 3.365832 CATGACACCATTTAGCAATCGC 58.634 45.455 0.00 0.00 38.99 4.58
3653 8254 3.905900 GCAATCGCTTTCTACCTGC 57.094 52.632 0.00 0.00 34.30 4.85
3667 8268 0.179018 ACCTGCGCCAGTTTTTCTCT 60.179 50.000 4.18 0.00 0.00 3.10
3672 8273 1.071605 CGCCAGTTTTTCTCTCTCGG 58.928 55.000 0.00 0.00 0.00 4.63
3686 8287 5.996644 TCTCTCTCGGAGATAAGGGATATC 58.003 45.833 8.39 0.00 45.20 1.63
3712 8313 2.678336 CGGCAGAACCTTTCATTAGGAC 59.322 50.000 0.00 0.00 38.73 3.85
3776 8392 4.393680 TCGGCATGTACTTTTTCATGTACC 59.606 41.667 0.00 0.00 42.09 3.34
3791 8407 7.660030 TTCATGTACCTGATGTTCTGATCTA 57.340 36.000 1.42 0.00 0.00 1.98
3805 8421 2.036992 CTGATCTAGCAAATCTCGGCCT 59.963 50.000 0.00 0.00 0.00 5.19
3851 8468 4.022935 TGAACAGATCAGCAATTGGTTGAC 60.023 41.667 7.57 2.27 39.69 3.18
3863 8480 2.932855 TGGTTGACACGAATTACCCA 57.067 45.000 0.00 0.00 0.00 4.51
3892 8509 2.836372 TGCTGACATCTTCTCCTGTGAT 59.164 45.455 0.00 0.00 0.00 3.06
4016 8701 2.515523 CAGATTGCCGGAGCTGGG 60.516 66.667 5.05 0.00 40.80 4.45
4066 8751 4.459089 GCCTCGCCCGCTTCTTCT 62.459 66.667 0.00 0.00 0.00 2.85
4067 8752 2.266055 CCTCGCCCGCTTCTTCTT 59.734 61.111 0.00 0.00 0.00 2.52
4068 8753 1.811679 CCTCGCCCGCTTCTTCTTC 60.812 63.158 0.00 0.00 0.00 2.87
4069 8754 1.216710 CTCGCCCGCTTCTTCTTCT 59.783 57.895 0.00 0.00 0.00 2.85
4070 8755 0.390472 CTCGCCCGCTTCTTCTTCTT 60.390 55.000 0.00 0.00 0.00 2.52
4071 8756 0.389948 TCGCCCGCTTCTTCTTCTTC 60.390 55.000 0.00 0.00 0.00 2.87
4072 8757 0.390472 CGCCCGCTTCTTCTTCTTCT 60.390 55.000 0.00 0.00 0.00 2.85
4073 8758 1.364721 GCCCGCTTCTTCTTCTTCTC 58.635 55.000 0.00 0.00 0.00 2.87
4114 8799 0.038526 TGGAGCGTCGTTTTCCTCTC 60.039 55.000 11.87 1.05 32.12 3.20
4135 8836 5.699458 TCTCTTGTTTACCTTTTTAGCCTCG 59.301 40.000 0.00 0.00 0.00 4.63
4221 8927 7.886629 ATGGACCTCTACGTATAAACTTACA 57.113 36.000 0.00 0.00 0.00 2.41
4222 8928 7.088589 TGGACCTCTACGTATAAACTTACAC 57.911 40.000 0.00 0.00 0.00 2.90
4266 8978 4.779733 AGATCGGACCCGCCCTGT 62.780 66.667 3.13 0.00 39.59 4.00
4277 8989 3.041940 GCCCTGTGTTGTCGACGG 61.042 66.667 11.62 5.03 0.00 4.79
4301 9014 1.752833 GGTCGTCTCCCAACCTTGT 59.247 57.895 0.00 0.00 0.00 3.16
4306 9019 1.398692 GTCTCCCAACCTTGTTGCAA 58.601 50.000 0.00 0.00 0.00 4.08
4319 9032 1.081509 TTGCAATCGGCTTTCGCAC 60.082 52.632 0.00 0.00 45.15 5.34
4340 9053 2.665185 GCGTGCCGTCTGGTCTTT 60.665 61.111 0.00 0.00 37.67 2.52
4458 9185 2.552373 CGGTTAGGGTCCTTCTTTTGCT 60.552 50.000 0.00 0.00 0.00 3.91
4488 9223 9.875675 CATGAGCTTTATTGATTACTTAGAAGC 57.124 33.333 0.00 0.00 38.72 3.86
4504 9239 7.497595 ACTTAGAAGCAATATACATTCGTGGA 58.502 34.615 0.00 0.00 0.00 4.02
4515 9250 6.951256 ATACATTCGTGGATGATACAATCG 57.049 37.500 0.00 0.00 0.00 3.34
4551 9287 3.547413 CGAAACAAAGGGTCCTTTTCGAC 60.547 47.826 21.24 10.63 42.93 4.20
4560 9296 3.058085 GGGTCCTTTTCGACGCATTTTTA 60.058 43.478 0.00 0.00 43.29 1.52
4563 9299 5.106987 GGTCCTTTTCGACGCATTTTTAGTA 60.107 40.000 0.00 0.00 33.30 1.82
4644 9380 8.929827 TTTTATATTTCAGCCACAACATCATG 57.070 30.769 0.00 0.00 0.00 3.07
4645 9381 2.728690 TTTCAGCCACAACATCATGC 57.271 45.000 0.00 0.00 0.00 4.06
4646 9382 1.618487 TTCAGCCACAACATCATGCA 58.382 45.000 0.00 0.00 0.00 3.96
4647 9383 1.842052 TCAGCCACAACATCATGCAT 58.158 45.000 0.00 0.00 0.00 3.96
4648 9384 1.746787 TCAGCCACAACATCATGCATC 59.253 47.619 0.00 0.00 0.00 3.91
4649 9385 1.749063 CAGCCACAACATCATGCATCT 59.251 47.619 0.00 0.00 0.00 2.90
4650 9386 2.165641 CAGCCACAACATCATGCATCTT 59.834 45.455 0.00 0.00 0.00 2.40
4651 9387 2.829720 AGCCACAACATCATGCATCTTT 59.170 40.909 0.00 0.00 0.00 2.52
4652 9388 3.259876 AGCCACAACATCATGCATCTTTT 59.740 39.130 0.00 0.00 0.00 2.27
4653 9389 4.463539 AGCCACAACATCATGCATCTTTTA 59.536 37.500 0.00 0.00 0.00 1.52
4654 9390 5.047164 AGCCACAACATCATGCATCTTTTAA 60.047 36.000 0.00 0.00 0.00 1.52
4655 9391 5.638657 GCCACAACATCATGCATCTTTTAAA 59.361 36.000 0.00 0.00 0.00 1.52
4656 9392 6.147492 GCCACAACATCATGCATCTTTTAAAA 59.853 34.615 0.00 0.00 0.00 1.52
4657 9393 7.307870 GCCACAACATCATGCATCTTTTAAAAA 60.308 33.333 0.00 0.00 0.00 1.94
4763 9499 2.362077 CAGCCACACCTTGCTTAACTTT 59.638 45.455 0.00 0.00 35.12 2.66
4834 9570 2.277084 CCTAACCCACGAAATCTTCCG 58.723 52.381 0.00 0.00 0.00 4.30
4880 9616 1.536662 GACCTCCTCCACCACAGGT 60.537 63.158 0.00 0.00 42.24 4.00
4899 9635 0.683504 TCCTAGCGGTGAGAAGTCCC 60.684 60.000 0.00 0.00 0.00 4.46
4904 9640 0.250338 GCGGTGAGAAGTCCCTTTGT 60.250 55.000 0.00 0.00 0.00 2.83
4940 9687 3.027412 ACATACGATCTCCTTGCAGTCT 58.973 45.455 0.00 0.00 0.00 3.24
5033 9780 2.750350 CTTGCGGGGTCACTTCCT 59.250 61.111 0.00 0.00 0.00 3.36
5160 9911 1.852626 CCTTCACCCACCCCTCCTT 60.853 63.158 0.00 0.00 0.00 3.36
5206 9957 1.588667 CGGCGTGTTTTGCTTGCTT 60.589 52.632 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 98 4.564782 AAGGAGATGTGCTTTGAGATCA 57.435 40.909 0.00 0.00 27.91 2.92
176 179 0.880278 TCTGCCTGTTGTTCGTGCTC 60.880 55.000 0.00 0.00 0.00 4.26
187 190 1.340405 GGTTGGACATGATCTGCCTGT 60.340 52.381 0.00 0.00 0.00 4.00
237 241 2.514824 GCAGAGAATGGCGGGGAC 60.515 66.667 0.00 0.00 0.00 4.46
252 256 0.247460 CAGAAGGAGATGTCACGGCA 59.753 55.000 0.00 0.00 0.00 5.69
256 260 1.067565 TCGTGCAGAAGGAGATGTCAC 60.068 52.381 0.00 0.00 0.00 3.67
257 261 1.203287 CTCGTGCAGAAGGAGATGTCA 59.797 52.381 0.00 0.00 42.34 3.58
304 308 2.185867 GACCCGCCGAATAGCACA 59.814 61.111 0.00 0.00 0.00 4.57
306 310 2.712944 TTCGACCCGCCGAATAGCA 61.713 57.895 0.00 0.00 42.74 3.49
376 380 8.306761 AGCATCAGATCACATCATATTACGTTA 58.693 33.333 0.00 0.00 0.00 3.18
465 504 3.245479 ACTTGGTACCTAATTTGGTGGGG 60.245 47.826 20.15 9.03 41.05 4.96
549 599 2.970974 GCTTCGGCTGTGCAGAACC 61.971 63.158 3.02 0.00 37.77 3.62
568 618 0.611062 GGGTGGCAAAGGGTAGGTTC 60.611 60.000 0.00 0.00 0.00 3.62
679 751 4.024048 CCGTCCAATTAATTAAGCTCGCAT 60.024 41.667 0.00 0.00 0.00 4.73
687 759 7.378995 CACGTTTTTGACCGTCCAATTAATTAA 59.621 33.333 0.00 0.00 34.59 1.40
688 760 6.856938 CACGTTTTTGACCGTCCAATTAATTA 59.143 34.615 0.00 0.00 34.59 1.40
689 761 5.688176 CACGTTTTTGACCGTCCAATTAATT 59.312 36.000 0.00 0.00 34.59 1.40
690 762 5.216648 CACGTTTTTGACCGTCCAATTAAT 58.783 37.500 0.00 0.00 34.59 1.40
729 801 9.429359 GCATGCATGTCTAATTAACTAGAGTAT 57.571 33.333 26.79 0.00 0.00 2.12
730 802 8.421002 TGCATGCATGTCTAATTAACTAGAGTA 58.579 33.333 26.79 0.00 0.00 2.59
731 803 7.275183 TGCATGCATGTCTAATTAACTAGAGT 58.725 34.615 26.79 0.00 0.00 3.24
732 804 7.440556 ACTGCATGCATGTCTAATTAACTAGAG 59.559 37.037 26.79 5.07 0.00 2.43
733 805 7.275183 ACTGCATGCATGTCTAATTAACTAGA 58.725 34.615 26.79 0.00 0.00 2.43
734 806 7.488187 ACTGCATGCATGTCTAATTAACTAG 57.512 36.000 26.79 5.85 0.00 2.57
757 1027 4.492611 CAGGAGGTTAAAGTCGGTTCTAC 58.507 47.826 0.00 0.00 0.00 2.59
867 1429 2.826128 TGAGCTTGACGTAGACTGGAAT 59.174 45.455 0.00 0.00 0.00 3.01
973 1581 2.539338 GCGTGGTTCTTTGCGGTGA 61.539 57.895 0.00 0.00 0.00 4.02
1011 1637 1.380515 CCCCTCTCCTCTTCGCTGA 60.381 63.158 0.00 0.00 0.00 4.26
1015 1641 3.532155 CGCCCCCTCTCCTCTTCG 61.532 72.222 0.00 0.00 0.00 3.79
1028 1654 2.282180 TCTTGTCTTTGGCCGCCC 60.282 61.111 7.03 0.00 0.00 6.13
1035 1661 3.038710 GCTGCGTTTTCTCTTGTCTTTG 58.961 45.455 0.00 0.00 0.00 2.77
1956 2673 9.941664 CAGTGATTTGATTCAGACCATAATAAC 57.058 33.333 0.00 0.00 0.00 1.89
1963 2903 8.078060 TCTATACAGTGATTTGATTCAGACCA 57.922 34.615 0.00 0.00 0.00 4.02
1987 2999 8.382003 CGAAAAGCAATACAAAAGGACTAATC 57.618 34.615 0.00 0.00 0.00 1.75
2034 3046 6.546972 TTTTGTTTCCCTTTCACACAAAAC 57.453 33.333 4.76 0.00 40.61 2.43
2035 3047 6.712547 ACATTTTGTTTCCCTTTCACACAAAA 59.287 30.769 10.09 10.09 46.11 2.44
2039 3051 6.735678 AAACATTTTGTTTCCCTTTCACAC 57.264 33.333 0.00 0.00 46.61 3.82
2067 3084 1.217882 GCTTGCGTCTGTACTGTGTT 58.782 50.000 0.00 0.00 0.00 3.32
2068 3085 0.939577 CGCTTGCGTCTGTACTGTGT 60.940 55.000 6.86 0.00 0.00 3.72
2069 3086 1.775344 CGCTTGCGTCTGTACTGTG 59.225 57.895 6.86 0.00 0.00 3.66
2070 3087 2.022129 GCGCTTGCGTCTGTACTGT 61.022 57.895 16.38 0.00 0.00 3.55
2071 3088 1.678269 GAGCGCTTGCGTCTGTACTG 61.678 60.000 13.26 0.00 45.69 2.74
2073 3090 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
2074 3091 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
2075 3092 0.803768 CTATGAGCGCTTGCGTCTGT 60.804 55.000 13.26 7.66 45.69 3.41
2076 3093 0.526310 TCTATGAGCGCTTGCGTCTG 60.526 55.000 13.26 0.00 45.69 3.51
2078 3095 0.999406 TTTCTATGAGCGCTTGCGTC 59.001 50.000 13.26 12.36 45.69 5.19
2079 3096 0.721718 GTTTCTATGAGCGCTTGCGT 59.278 50.000 13.26 3.24 45.69 5.24
2080 3097 0.721154 TGTTTCTATGAGCGCTTGCG 59.279 50.000 13.26 10.90 45.69 4.85
2081 3098 1.527793 CGTGTTTCTATGAGCGCTTGC 60.528 52.381 13.26 0.00 39.58 4.01
2082 3099 1.527793 GCGTGTTTCTATGAGCGCTTG 60.528 52.381 13.26 2.57 41.37 4.01
2083 3100 0.721718 GCGTGTTTCTATGAGCGCTT 59.278 50.000 13.26 0.00 41.37 4.68
2084 3101 1.084370 GGCGTGTTTCTATGAGCGCT 61.084 55.000 11.27 11.27 43.65 5.92
2085 3102 1.348594 GGCGTGTTTCTATGAGCGC 59.651 57.895 0.00 0.00 43.46 5.92
2086 3103 1.075542 TTGGCGTGTTTCTATGAGCG 58.924 50.000 0.00 0.00 0.00 5.03
2087 3104 1.804151 TGTTGGCGTGTTTCTATGAGC 59.196 47.619 0.00 0.00 0.00 4.26
2088 3105 3.067106 AGTGTTGGCGTGTTTCTATGAG 58.933 45.455 0.00 0.00 0.00 2.90
2091 3108 3.120321 TGAGTGTTGGCGTGTTTCTAT 57.880 42.857 0.00 0.00 0.00 1.98
2093 3110 1.873591 GATGAGTGTTGGCGTGTTTCT 59.126 47.619 0.00 0.00 0.00 2.52
2094 3111 1.069227 GGATGAGTGTTGGCGTGTTTC 60.069 52.381 0.00 0.00 0.00 2.78
2097 3114 0.320771 GAGGATGAGTGTTGGCGTGT 60.321 55.000 0.00 0.00 0.00 4.49
2100 3117 2.101415 TCATAGAGGATGAGTGTTGGCG 59.899 50.000 0.00 0.00 39.78 5.69
2101 3118 3.827008 TCATAGAGGATGAGTGTTGGC 57.173 47.619 0.00 0.00 39.78 4.52
2102 3119 4.872691 GTGTTCATAGAGGATGAGTGTTGG 59.127 45.833 0.00 0.00 45.43 3.77
2103 3120 5.349817 GTGTGTTCATAGAGGATGAGTGTTG 59.650 44.000 0.00 0.00 45.43 3.33
2104 3121 5.012046 TGTGTGTTCATAGAGGATGAGTGTT 59.988 40.000 0.00 0.00 45.43 3.32
2105 3122 4.528206 TGTGTGTTCATAGAGGATGAGTGT 59.472 41.667 0.00 0.00 45.43 3.55
2106 3123 4.867047 GTGTGTGTTCATAGAGGATGAGTG 59.133 45.833 0.00 0.00 45.43 3.51
2107 3124 4.081420 GGTGTGTGTTCATAGAGGATGAGT 60.081 45.833 0.00 0.00 45.43 3.41
2108 3125 4.437239 GGTGTGTGTTCATAGAGGATGAG 58.563 47.826 0.00 0.00 45.43 2.90
2109 3126 3.197766 GGGTGTGTGTTCATAGAGGATGA 59.802 47.826 0.00 0.00 43.11 2.92
2110 3127 3.198635 AGGGTGTGTGTTCATAGAGGATG 59.801 47.826 0.00 0.00 36.82 3.51
2111 3128 3.454858 AGGGTGTGTGTTCATAGAGGAT 58.545 45.455 0.00 0.00 0.00 3.24
2112 3129 2.902608 AGGGTGTGTGTTCATAGAGGA 58.097 47.619 0.00 0.00 0.00 3.71
2113 3130 3.118738 GGTAGGGTGTGTGTTCATAGAGG 60.119 52.174 0.00 0.00 0.00 3.69
2114 3131 3.118738 GGGTAGGGTGTGTGTTCATAGAG 60.119 52.174 0.00 0.00 0.00 2.43
2115 3132 2.835764 GGGTAGGGTGTGTGTTCATAGA 59.164 50.000 0.00 0.00 0.00 1.98
2116 3133 2.093128 GGGGTAGGGTGTGTGTTCATAG 60.093 54.545 0.00 0.00 0.00 2.23
2117 3134 1.910671 GGGGTAGGGTGTGTGTTCATA 59.089 52.381 0.00 0.00 0.00 2.15
2118 3135 0.696501 GGGGTAGGGTGTGTGTTCAT 59.303 55.000 0.00 0.00 0.00 2.57
2119 3136 0.400815 AGGGGTAGGGTGTGTGTTCA 60.401 55.000 0.00 0.00 0.00 3.18
2120 3137 1.648116 TAGGGGTAGGGTGTGTGTTC 58.352 55.000 0.00 0.00 0.00 3.18
2121 3138 1.913419 CATAGGGGTAGGGTGTGTGTT 59.087 52.381 0.00 0.00 0.00 3.32
2122 3139 1.079825 TCATAGGGGTAGGGTGTGTGT 59.920 52.381 0.00 0.00 0.00 3.72
2123 3140 1.874129 TCATAGGGGTAGGGTGTGTG 58.126 55.000 0.00 0.00 0.00 3.82
2124 3141 2.193993 GTTCATAGGGGTAGGGTGTGT 58.806 52.381 0.00 0.00 0.00 3.72
2125 3142 2.093128 GTGTTCATAGGGGTAGGGTGTG 60.093 54.545 0.00 0.00 0.00 3.82
2126 3143 2.193993 GTGTTCATAGGGGTAGGGTGT 58.806 52.381 0.00 0.00 0.00 4.16
2127 3144 1.489230 GGTGTTCATAGGGGTAGGGTG 59.511 57.143 0.00 0.00 0.00 4.61
2128 3145 1.368558 AGGTGTTCATAGGGGTAGGGT 59.631 52.381 0.00 0.00 0.00 4.34
2129 3146 2.047830 GAGGTGTTCATAGGGGTAGGG 58.952 57.143 0.00 0.00 0.00 3.53
2130 3147 2.047830 GGAGGTGTTCATAGGGGTAGG 58.952 57.143 0.00 0.00 0.00 3.18
2131 3148 2.759355 TGGAGGTGTTCATAGGGGTAG 58.241 52.381 0.00 0.00 0.00 3.18
2132 3149 2.953093 TGGAGGTGTTCATAGGGGTA 57.047 50.000 0.00 0.00 0.00 3.69
2133 3150 1.916181 CTTGGAGGTGTTCATAGGGGT 59.084 52.381 0.00 0.00 0.00 4.95
2134 3151 2.171448 CTCTTGGAGGTGTTCATAGGGG 59.829 54.545 0.00 0.00 0.00 4.79
2135 3152 3.107601 TCTCTTGGAGGTGTTCATAGGG 58.892 50.000 0.00 0.00 0.00 3.53
2136 3153 3.772025 AGTCTCTTGGAGGTGTTCATAGG 59.228 47.826 0.00 0.00 0.00 2.57
2137 3154 6.531503 TTAGTCTCTTGGAGGTGTTCATAG 57.468 41.667 0.00 0.00 0.00 2.23
2138 3155 5.105310 GCTTAGTCTCTTGGAGGTGTTCATA 60.105 44.000 0.00 0.00 0.00 2.15
2139 3156 4.323104 GCTTAGTCTCTTGGAGGTGTTCAT 60.323 45.833 0.00 0.00 0.00 2.57
2140 3157 3.006967 GCTTAGTCTCTTGGAGGTGTTCA 59.993 47.826 0.00 0.00 0.00 3.18
2141 3158 3.591023 GCTTAGTCTCTTGGAGGTGTTC 58.409 50.000 0.00 0.00 0.00 3.18
2142 3159 2.303311 GGCTTAGTCTCTTGGAGGTGTT 59.697 50.000 0.00 0.00 0.00 3.32
2143 3160 1.903183 GGCTTAGTCTCTTGGAGGTGT 59.097 52.381 0.00 0.00 0.00 4.16
2144 3161 1.134965 CGGCTTAGTCTCTTGGAGGTG 60.135 57.143 0.00 0.00 0.00 4.00
2145 3162 1.187087 CGGCTTAGTCTCTTGGAGGT 58.813 55.000 0.00 0.00 0.00 3.85
2146 3163 1.475403 TCGGCTTAGTCTCTTGGAGG 58.525 55.000 0.00 0.00 0.00 4.30
2147 3164 6.375736 TGATATATCGGCTTAGTCTCTTGGAG 59.624 42.308 8.19 0.00 0.00 3.86
2148 3165 6.246163 TGATATATCGGCTTAGTCTCTTGGA 58.754 40.000 8.19 0.00 0.00 3.53
2149 3166 6.516739 TGATATATCGGCTTAGTCTCTTGG 57.483 41.667 8.19 0.00 0.00 3.61
2150 3167 7.995289 AGATGATATATCGGCTTAGTCTCTTG 58.005 38.462 8.19 0.00 0.00 3.02
2151 3168 8.465999 CAAGATGATATATCGGCTTAGTCTCTT 58.534 37.037 15.44 7.20 0.00 2.85
2152 3169 7.831690 TCAAGATGATATATCGGCTTAGTCTCT 59.168 37.037 15.44 2.92 0.00 3.10
2153 3170 7.990917 TCAAGATGATATATCGGCTTAGTCTC 58.009 38.462 15.44 1.21 0.00 3.36
2154 3171 7.831690 TCTCAAGATGATATATCGGCTTAGTCT 59.168 37.037 15.44 5.69 0.00 3.24
2155 3172 7.990917 TCTCAAGATGATATATCGGCTTAGTC 58.009 38.462 15.44 4.03 0.00 2.59
2156 3173 7.946381 TCTCAAGATGATATATCGGCTTAGT 57.054 36.000 15.44 0.00 0.00 2.24
2157 3174 9.814899 AAATCTCAAGATGATATATCGGCTTAG 57.185 33.333 15.44 13.40 34.49 2.18
2160 3177 9.593134 GTAAAATCTCAAGATGATATATCGGCT 57.407 33.333 8.19 4.99 34.49 5.52
2161 3178 9.371136 TGTAAAATCTCAAGATGATATATCGGC 57.629 33.333 8.19 2.79 34.49 5.54
2170 3187 8.659491 CGATGACTTTGTAAAATCTCAAGATGA 58.341 33.333 0.00 0.00 34.49 2.92
2171 3188 8.446273 ACGATGACTTTGTAAAATCTCAAGATG 58.554 33.333 0.00 0.00 34.49 2.90
2172 3189 8.553459 ACGATGACTTTGTAAAATCTCAAGAT 57.447 30.769 0.00 0.00 36.07 2.40
2173 3190 7.962964 ACGATGACTTTGTAAAATCTCAAGA 57.037 32.000 0.00 0.00 0.00 3.02
2174 3191 8.282592 TCAACGATGACTTTGTAAAATCTCAAG 58.717 33.333 0.00 0.00 0.00 3.02
2175 3192 8.148807 TCAACGATGACTTTGTAAAATCTCAA 57.851 30.769 0.00 0.00 0.00 3.02
2176 3193 7.722795 TCAACGATGACTTTGTAAAATCTCA 57.277 32.000 0.00 0.00 0.00 3.27
2191 3208 0.098200 CTACGAGGCGTCAACGATGA 59.902 55.000 12.92 0.00 41.54 2.92
2192 3209 1.472276 GCTACGAGGCGTCAACGATG 61.472 60.000 12.92 6.49 41.54 3.84
2193 3210 1.226603 GCTACGAGGCGTCAACGAT 60.227 57.895 12.92 0.00 41.54 3.73
2194 3211 2.177531 GCTACGAGGCGTCAACGA 59.822 61.111 12.92 0.00 41.54 3.85
2195 3212 2.879462 GGCTACGAGGCGTCAACG 60.879 66.667 7.26 5.20 41.54 4.10
2196 3213 1.373748 TTGGCTACGAGGCGTCAAC 60.374 57.895 7.26 0.00 44.78 3.18
2197 3214 1.373748 GTTGGCTACGAGGCGTCAA 60.374 57.895 7.26 0.00 44.78 3.18
2198 3215 2.260434 GTTGGCTACGAGGCGTCA 59.740 61.111 7.26 0.00 44.78 4.35
2216 3233 4.236147 GTTTAGTGGGAAGAGACGTTCTC 58.764 47.826 6.85 6.85 43.70 2.87
2217 3234 3.305199 CGTTTAGTGGGAAGAGACGTTCT 60.305 47.826 0.00 0.00 37.93 3.01
2218 3235 2.985139 CGTTTAGTGGGAAGAGACGTTC 59.015 50.000 0.00 0.00 0.00 3.95
2219 3236 2.363359 ACGTTTAGTGGGAAGAGACGTT 59.637 45.455 0.00 0.00 38.91 3.99
2220 3237 1.959282 ACGTTTAGTGGGAAGAGACGT 59.041 47.619 0.00 0.00 37.42 4.34
2221 3238 2.325761 CACGTTTAGTGGGAAGAGACG 58.674 52.381 0.00 0.00 46.77 4.18
2232 3249 2.098233 CCGGCGATGCACGTTTAGT 61.098 57.895 9.30 0.00 44.60 2.24
2233 3250 1.355796 TTCCGGCGATGCACGTTTAG 61.356 55.000 9.30 0.00 44.60 1.85
2234 3251 0.949588 TTTCCGGCGATGCACGTTTA 60.950 50.000 9.30 0.00 44.60 2.01
2235 3252 1.582610 ATTTCCGGCGATGCACGTTT 61.583 50.000 9.30 0.00 44.60 3.60
2236 3253 1.977594 GATTTCCGGCGATGCACGTT 61.978 55.000 9.30 0.00 44.60 3.99
2237 3254 2.435938 ATTTCCGGCGATGCACGT 60.436 55.556 9.30 0.00 44.60 4.49
2238 3255 2.324477 GATTTCCGGCGATGCACG 59.676 61.111 9.30 0.00 45.66 5.34
2239 3256 0.531974 TAGGATTTCCGGCGATGCAC 60.532 55.000 9.30 0.00 42.08 4.57
2240 3257 0.179234 TTAGGATTTCCGGCGATGCA 59.821 50.000 9.30 0.00 42.08 3.96
2241 3258 1.305201 TTTAGGATTTCCGGCGATGC 58.695 50.000 9.30 0.00 42.08 3.91
2242 3259 5.682943 TTATTTTAGGATTTCCGGCGATG 57.317 39.130 9.30 0.00 42.08 3.84
2243 3260 6.894339 ATTTATTTTAGGATTTCCGGCGAT 57.106 33.333 9.30 0.00 42.08 4.58
2244 3261 6.702716 AATTTATTTTAGGATTTCCGGCGA 57.297 33.333 9.30 0.00 42.08 5.54
2245 3262 8.859517 TTAAATTTATTTTAGGATTTCCGGCG 57.140 30.769 0.00 0.00 42.08 6.46
2267 3284 8.712363 GCAATGAGATACTCGCATTTATCTTAA 58.288 33.333 3.75 0.00 42.78 1.85
2268 3285 7.331934 GGCAATGAGATACTCGCATTTATCTTA 59.668 37.037 3.75 0.00 42.78 2.10
2269 3286 6.148480 GGCAATGAGATACTCGCATTTATCTT 59.852 38.462 3.75 0.00 42.78 2.40
2270 3287 5.641209 GGCAATGAGATACTCGCATTTATCT 59.359 40.000 3.75 0.00 42.78 1.98
2271 3288 5.163814 GGGCAATGAGATACTCGCATTTATC 60.164 44.000 3.75 0.00 42.78 1.75
2272 3289 4.697352 GGGCAATGAGATACTCGCATTTAT 59.303 41.667 3.75 0.00 42.78 1.40
2273 3290 4.065088 GGGCAATGAGATACTCGCATTTA 58.935 43.478 3.75 0.00 42.78 1.40
2274 3291 2.880890 GGGCAATGAGATACTCGCATTT 59.119 45.455 3.75 0.00 42.78 2.32
2275 3292 2.498167 GGGCAATGAGATACTCGCATT 58.502 47.619 0.98 0.98 45.49 3.56
2276 3293 1.606480 CGGGCAATGAGATACTCGCAT 60.606 52.381 0.00 0.00 38.55 4.73
2277 3294 0.249447 CGGGCAATGAGATACTCGCA 60.249 55.000 0.00 0.00 32.35 5.10
2278 3295 0.946221 CCGGGCAATGAGATACTCGC 60.946 60.000 0.00 0.00 32.35 5.03
2279 3296 0.389391 ACCGGGCAATGAGATACTCG 59.611 55.000 6.32 0.00 32.35 4.18
2280 3297 1.412710 TGACCGGGCAATGAGATACTC 59.587 52.381 8.12 0.00 0.00 2.59
2303 3320 4.625311 GGGTGAAAGTTTCCGCATTATTTG 59.375 41.667 13.01 0.00 0.00 2.32
2344 3361 9.838339 AATTTGTGTTGGTCAAAATAAACCATA 57.162 25.926 0.00 0.00 44.72 2.74
2346 3363 9.838339 ATAATTTGTGTTGGTCAAAATAAACCA 57.162 25.926 0.00 0.00 43.72 3.67
2408 3520 2.421529 GGTGAGGACCATTTATCCGCTT 60.422 50.000 0.00 0.00 42.59 4.68
2409 3521 1.141053 GGTGAGGACCATTTATCCGCT 59.859 52.381 0.00 0.00 42.59 5.52
2410 3522 1.594331 GGTGAGGACCATTTATCCGC 58.406 55.000 0.00 0.00 42.59 5.54
2411 3523 1.138266 ACGGTGAGGACCATTTATCCG 59.862 52.381 0.00 0.00 43.33 4.18
2412 3524 3.277142 AACGGTGAGGACCATTTATCC 57.723 47.619 0.00 0.00 43.33 2.59
2460 3712 5.292101 GCAGTGTGAATTAGTCGAAGCTAAT 59.708 40.000 3.16 3.16 41.79 1.73
2479 3731 7.010923 GTCTTATATTTTGAGACAGAGGCAGTG 59.989 40.741 0.00 0.00 39.59 3.66
2482 3736 6.042777 CGTCTTATATTTTGAGACAGAGGCA 58.957 40.000 0.00 0.00 39.74 4.75
2483 3737 6.043411 ACGTCTTATATTTTGAGACAGAGGC 58.957 40.000 0.00 0.00 39.74 4.70
2484 3738 8.480643 AAACGTCTTATATTTTGAGACAGAGG 57.519 34.615 0.00 0.00 39.74 3.69
2487 3741 9.878599 ACAAAAACGTCTTATATTTTGAGACAG 57.121 29.630 21.46 1.66 42.48 3.51
2517 3771 9.740239 AGTGAAATATTTGCATGCTATGTTTAG 57.260 29.630 20.33 0.00 0.00 1.85
2525 3780 5.198965 AGGAGAGTGAAATATTTGCATGCT 58.801 37.500 20.33 0.40 0.00 3.79
2540 3796 0.600255 AAACCGCGTGAAGGAGAGTG 60.600 55.000 4.92 0.00 0.00 3.51
2541 3797 0.600255 CAAACCGCGTGAAGGAGAGT 60.600 55.000 4.92 0.00 0.00 3.24
2547 3803 1.868498 TCCTAAACAAACCGCGTGAAG 59.132 47.619 4.92 0.00 0.00 3.02
2553 3809 7.306953 TGTTTACATATTCCTAAACAAACCGC 58.693 34.615 7.31 0.00 39.02 5.68
2559 3815 8.588290 ATGGCTTGTTTACATATTCCTAAACA 57.412 30.769 6.22 6.22 39.81 2.83
2628 3885 9.846248 GTATCAGTATTTGATGCTTTGACTTTT 57.154 29.630 0.12 0.00 46.01 2.27
2629 3886 8.177663 CGTATCAGTATTTGATGCTTTGACTTT 58.822 33.333 0.12 0.00 46.01 2.66
2638 3895 4.378770 CCATGGCGTATCAGTATTTGATGC 60.379 45.833 0.00 0.00 46.01 3.91
2642 3993 3.738982 TCCCATGGCGTATCAGTATTTG 58.261 45.455 6.09 0.00 0.00 2.32
2660 4011 2.828868 TGCATACGCAGGGATCCC 59.171 61.111 24.59 24.59 45.36 3.85
2669 4020 1.092921 TCGTTCCCCATTGCATACGC 61.093 55.000 0.00 0.00 39.24 4.42
2673 4024 1.481772 CCAAATCGTTCCCCATTGCAT 59.518 47.619 0.00 0.00 0.00 3.96
2675 4026 1.134946 CTCCAAATCGTTCCCCATTGC 59.865 52.381 0.00 0.00 0.00 3.56
2719 4076 2.107750 ACATCTGCATCGGCCGAG 59.892 61.111 33.87 24.41 36.67 4.63
2789 4644 7.472543 AGAATTGATCGCCAACAAATAACTAC 58.527 34.615 0.00 0.00 37.63 2.73
2820 4675 1.753649 CATCATCACTCGACCAGTCCT 59.246 52.381 0.00 0.00 30.26 3.85
2821 4676 1.804372 GCATCATCACTCGACCAGTCC 60.804 57.143 0.00 0.00 30.26 3.85
2829 4684 5.475273 ACTGTATTTTGCATCATCACTCG 57.525 39.130 0.00 0.00 0.00 4.18
2887 4743 5.853282 CAGCCAAAAACTAAGAATTGTCTCG 59.147 40.000 0.00 0.00 30.70 4.04
2899 4755 2.192664 TCATCCGCAGCCAAAAACTA 57.807 45.000 0.00 0.00 0.00 2.24
2905 4761 2.016318 CTATGTTTCATCCGCAGCCAA 58.984 47.619 0.00 0.00 0.00 4.52
2920 4776 6.009589 AGATCTATGACTGCTACAGCTATGT 58.990 40.000 0.00 0.00 43.76 2.29
2927 4783 5.536538 CCAAGGTAGATCTATGACTGCTACA 59.463 44.000 5.57 0.00 34.58 2.74
2948 4811 2.095969 CAGCACGCGAACTATTTTCCAA 60.096 45.455 15.93 0.00 0.00 3.53
3025 4891 2.119801 ACAGGGCTATTGCTGACTTG 57.880 50.000 0.00 0.00 39.59 3.16
3040 4906 7.141363 CAGTTTTAGGTTGAAGATTGAACAGG 58.859 38.462 0.00 0.00 0.00 4.00
3047 4913 4.084013 CGCGACAGTTTTAGGTTGAAGATT 60.084 41.667 0.00 0.00 0.00 2.40
3067 4933 5.132570 GGACTATCCATACTACGAAACGCG 61.133 50.000 3.53 3.53 40.55 6.01
3077 4943 4.762765 CGCAGACTAAGGACTATCCATACT 59.237 45.833 0.00 0.00 39.61 2.12
3078 4944 4.082679 CCGCAGACTAAGGACTATCCATAC 60.083 50.000 0.00 0.00 39.61 2.39
3093 4959 1.539929 GCTATGCTGAATCCGCAGACT 60.540 52.381 5.47 0.00 41.22 3.24
3094 4960 0.864455 GCTATGCTGAATCCGCAGAC 59.136 55.000 5.47 0.00 41.22 3.51
3244 7440 7.152645 TCTTCTGCTACCGTGGAATAATAATC 58.847 38.462 0.00 0.00 0.00 1.75
3245 7441 7.062749 TCTTCTGCTACCGTGGAATAATAAT 57.937 36.000 0.00 0.00 0.00 1.28
3246 7442 6.474140 TCTTCTGCTACCGTGGAATAATAA 57.526 37.500 0.00 0.00 0.00 1.40
3247 7443 6.474140 TTCTTCTGCTACCGTGGAATAATA 57.526 37.500 0.00 0.00 0.00 0.98
3255 7454 2.069273 CCTGTTTCTTCTGCTACCGTG 58.931 52.381 0.00 0.00 0.00 4.94
3285 7484 3.450028 GACACCTGGTCAGAGATGC 57.550 57.895 0.00 0.00 46.19 3.91
3298 7497 0.678366 TCTCTCTCGCTCTGGACACC 60.678 60.000 0.00 0.00 0.00 4.16
3310 7509 8.835439 GTTATGATCCCTGAAAATTTCTCTCTC 58.165 37.037 7.29 0.00 0.00 3.20
3313 7513 7.338710 TCGTTATGATCCCTGAAAATTTCTCT 58.661 34.615 7.29 0.00 0.00 3.10
3385 7589 3.525619 CGGTGACCGGAAAGAATCA 57.474 52.632 17.80 0.00 44.15 2.57
3511 7719 4.357918 AGTATCATGCCACCATCTAACC 57.642 45.455 0.00 0.00 0.00 2.85
3520 7728 6.128336 GCTTCAATGAGATAGTATCATGCCAC 60.128 42.308 12.66 0.00 37.46 5.01
3574 7852 4.722361 AGTTACCCGCAAAAACAAAGAA 57.278 36.364 0.00 0.00 0.00 2.52
3575 7853 5.766174 AGATAGTTACCCGCAAAAACAAAGA 59.234 36.000 0.00 0.00 0.00 2.52
3576 7854 6.009115 AGATAGTTACCCGCAAAAACAAAG 57.991 37.500 0.00 0.00 0.00 2.77
3577 7855 5.766174 AGAGATAGTTACCCGCAAAAACAAA 59.234 36.000 0.00 0.00 0.00 2.83
3578 7856 5.310451 AGAGATAGTTACCCGCAAAAACAA 58.690 37.500 0.00 0.00 0.00 2.83
3579 7857 4.901868 AGAGATAGTTACCCGCAAAAACA 58.098 39.130 0.00 0.00 0.00 2.83
3580 7858 5.874895 AAGAGATAGTTACCCGCAAAAAC 57.125 39.130 0.00 0.00 0.00 2.43
3581 7859 5.998981 TCAAAGAGATAGTTACCCGCAAAAA 59.001 36.000 0.00 0.00 0.00 1.94
3582 7860 5.553123 TCAAAGAGATAGTTACCCGCAAAA 58.447 37.500 0.00 0.00 0.00 2.44
3583 7861 5.155278 TCAAAGAGATAGTTACCCGCAAA 57.845 39.130 0.00 0.00 0.00 3.68
3584 7862 4.811969 TCAAAGAGATAGTTACCCGCAA 57.188 40.909 0.00 0.00 0.00 4.85
3585 7863 4.222145 ACTTCAAAGAGATAGTTACCCGCA 59.778 41.667 0.00 0.00 0.00 5.69
3586 7864 4.756502 ACTTCAAAGAGATAGTTACCCGC 58.243 43.478 0.00 0.00 0.00 6.13
3587 7865 8.943909 ATTAACTTCAAAGAGATAGTTACCCG 57.056 34.615 0.00 0.00 33.56 5.28
3592 7870 9.575783 GACGAGATTAACTTCAAAGAGATAGTT 57.424 33.333 0.00 0.00 34.36 2.24
3593 7871 8.740906 TGACGAGATTAACTTCAAAGAGATAGT 58.259 33.333 0.00 0.00 0.00 2.12
3594 7872 9.015577 GTGACGAGATTAACTTCAAAGAGATAG 57.984 37.037 0.00 0.00 0.00 2.08
3595 7873 7.974501 GGTGACGAGATTAACTTCAAAGAGATA 59.025 37.037 0.00 0.00 0.00 1.98
3596 7874 6.814146 GGTGACGAGATTAACTTCAAAGAGAT 59.186 38.462 0.00 0.00 0.00 2.75
3597 7875 6.157211 GGTGACGAGATTAACTTCAAAGAGA 58.843 40.000 0.00 0.00 0.00 3.10
3598 7876 5.926542 TGGTGACGAGATTAACTTCAAAGAG 59.073 40.000 0.00 0.00 0.00 2.85
3599 7877 5.849510 TGGTGACGAGATTAACTTCAAAGA 58.150 37.500 0.00 0.00 0.00 2.52
3600 7878 6.368791 TCATGGTGACGAGATTAACTTCAAAG 59.631 38.462 0.00 0.00 0.00 2.77
3642 8243 1.523758 AAACTGGCGCAGGTAGAAAG 58.476 50.000 10.83 0.00 35.51 2.62
3653 8254 1.071605 CCGAGAGAGAAAAACTGGCG 58.928 55.000 0.00 0.00 0.00 5.69
3667 8268 5.256806 TGTGATATCCCTTATCTCCGAGA 57.743 43.478 0.00 0.00 38.05 4.04
3672 8273 4.160439 TGCCGATGTGATATCCCTTATCTC 59.840 45.833 0.00 0.00 38.05 2.75
3686 8287 1.522668 TGAAAGGTTCTGCCGATGTG 58.477 50.000 0.00 0.00 43.70 3.21
3776 8392 6.144241 CGAGATTTGCTAGATCAGAACATCAG 59.856 42.308 0.00 0.00 0.00 2.90
3791 8407 0.753262 ACGATAGGCCGAGATTTGCT 59.247 50.000 0.00 0.00 43.77 3.91
3805 8421 1.407618 CATCAGGGGACGACAACGATA 59.592 52.381 0.00 0.00 42.66 2.92
3851 8468 3.425404 CAAAAGCGATGGGTAATTCGTG 58.575 45.455 0.00 0.00 37.66 4.35
3863 8480 3.341823 AGAAGATGTCAGCAAAAGCGAT 58.658 40.909 0.00 0.00 0.00 4.58
3892 8509 6.090483 TCTGAAACACCACAGAAACAAAAA 57.910 33.333 0.00 0.00 39.68 1.94
3962 8581 0.318762 ACTTCAGGTGGACGAGAAGC 59.681 55.000 0.00 0.00 38.70 3.86
3966 8585 3.017442 TCTATCACTTCAGGTGGACGAG 58.983 50.000 0.00 0.00 45.38 4.18
4062 8747 7.441017 TGAAGAAGAAGAAGGAGAAGAAGAAG 58.559 38.462 0.00 0.00 0.00 2.85
4063 8748 7.366847 TGAAGAAGAAGAAGGAGAAGAAGAA 57.633 36.000 0.00 0.00 0.00 2.52
4064 8749 6.985653 TGAAGAAGAAGAAGGAGAAGAAGA 57.014 37.500 0.00 0.00 0.00 2.87
4065 8750 7.487829 CGTATGAAGAAGAAGAAGGAGAAGAAG 59.512 40.741 0.00 0.00 0.00 2.85
4066 8751 7.316640 CGTATGAAGAAGAAGAAGGAGAAGAA 58.683 38.462 0.00 0.00 0.00 2.52
4067 8752 6.127591 CCGTATGAAGAAGAAGAAGGAGAAGA 60.128 42.308 0.00 0.00 0.00 2.87
4068 8753 6.039616 CCGTATGAAGAAGAAGAAGGAGAAG 58.960 44.000 0.00 0.00 0.00 2.85
4069 8754 5.624738 GCCGTATGAAGAAGAAGAAGGAGAA 60.625 44.000 0.00 0.00 0.00 2.87
4070 8755 4.142138 GCCGTATGAAGAAGAAGAAGGAGA 60.142 45.833 0.00 0.00 0.00 3.71
4071 8756 4.116238 GCCGTATGAAGAAGAAGAAGGAG 58.884 47.826 0.00 0.00 0.00 3.69
4072 8757 3.513912 TGCCGTATGAAGAAGAAGAAGGA 59.486 43.478 0.00 0.00 0.00 3.36
4073 8758 3.861840 TGCCGTATGAAGAAGAAGAAGG 58.138 45.455 0.00 0.00 0.00 3.46
4114 8799 4.615223 GCCGAGGCTAAAAAGGTAAACAAG 60.615 45.833 6.90 0.00 38.26 3.16
4135 8836 0.029834 CAGCAATGTTATCGCAGGCC 59.970 55.000 0.00 0.00 0.00 5.19
4172 8873 5.145513 ACATCTCCCCTAAGCTAACTACT 57.854 43.478 0.00 0.00 0.00 2.57
4221 8927 2.168313 TCACGCACAGGATCATATGTGT 59.832 45.455 19.79 11.87 46.75 3.72
4393 9117 7.174080 TCCACATCGAATCAAACAATCACTTAA 59.826 33.333 0.00 0.00 0.00 1.85
4441 9168 5.772393 TGATTAGCAAAAGAAGGACCCTA 57.228 39.130 0.00 0.00 0.00 3.53
4448 9175 9.798994 AATAAAGCTCATGATTAGCAAAAGAAG 57.201 29.630 8.02 0.00 42.62 2.85
4494 9229 3.494626 GCGATTGTATCATCCACGAATGT 59.505 43.478 0.00 0.00 0.00 2.71
4495 9230 3.422214 CGCGATTGTATCATCCACGAATG 60.422 47.826 0.00 0.00 0.00 2.67
4504 9239 3.469008 TTTCCTCCGCGATTGTATCAT 57.531 42.857 8.23 0.00 0.00 2.45
4551 9287 5.238442 CGTTCGTCTCTTACTAAAAATGCG 58.762 41.667 0.00 0.00 0.00 4.73
4560 9296 4.008330 TCTCATTCCGTTCGTCTCTTACT 58.992 43.478 0.00 0.00 0.00 2.24
4563 9299 3.082548 TCTCTCATTCCGTTCGTCTCTT 58.917 45.455 0.00 0.00 0.00 2.85
4623 9359 4.403113 TGCATGATGTTGTGGCTGAAATAT 59.597 37.500 0.00 0.00 0.00 1.28
4624 9360 3.762823 TGCATGATGTTGTGGCTGAAATA 59.237 39.130 0.00 0.00 0.00 1.40
4625 9361 2.563620 TGCATGATGTTGTGGCTGAAAT 59.436 40.909 0.00 0.00 0.00 2.17
4626 9362 1.962100 TGCATGATGTTGTGGCTGAAA 59.038 42.857 0.00 0.00 0.00 2.69
4629 9365 1.749063 AGATGCATGATGTTGTGGCTG 59.251 47.619 2.46 0.00 0.00 4.85
4630 9366 2.139323 AGATGCATGATGTTGTGGCT 57.861 45.000 2.46 0.00 0.00 4.75
4631 9367 2.953466 AAGATGCATGATGTTGTGGC 57.047 45.000 2.46 0.00 0.00 5.01
4632 9368 7.655236 TTTTAAAAGATGCATGATGTTGTGG 57.345 32.000 2.46 0.00 0.00 4.17
4658 9394 4.929819 AATAAAGGTGCGACTGGTTTTT 57.070 36.364 0.00 0.00 0.00 1.94
4659 9395 4.929819 AAATAAAGGTGCGACTGGTTTT 57.070 36.364 0.00 0.00 0.00 2.43
4660 9396 5.564063 GCTTAAATAAAGGTGCGACTGGTTT 60.564 40.000 0.00 0.00 35.58 3.27
4661 9397 4.082949 GCTTAAATAAAGGTGCGACTGGTT 60.083 41.667 0.00 0.00 35.58 3.67
4662 9398 3.439129 GCTTAAATAAAGGTGCGACTGGT 59.561 43.478 0.00 0.00 35.58 4.00
4663 9399 3.438781 TGCTTAAATAAAGGTGCGACTGG 59.561 43.478 0.00 0.00 35.58 4.00
4669 9405 2.829120 TGGGGTGCTTAAATAAAGGTGC 59.171 45.455 0.00 0.00 35.58 5.01
4720 9456 3.742013 GCATGTGCCCCCAGATTTTATTG 60.742 47.826 0.00 0.00 34.31 1.90
4834 9570 3.011517 TGGCCTTGAGGGAGAGCC 61.012 66.667 3.32 0.00 44.13 4.70
4880 9616 0.683504 GGGACTTCTCACCGCTAGGA 60.684 60.000 0.00 0.00 41.02 2.94
4899 9635 4.992688 TGTAAACTTCAAGGCACACAAAG 58.007 39.130 0.00 0.00 0.00 2.77
4904 9640 4.633175 TCGTATGTAAACTTCAAGGCACA 58.367 39.130 0.00 0.00 0.00 4.57
4940 9687 6.014584 ACATTGCCAACCTACATATCGAGATA 60.015 38.462 0.00 0.00 0.00 1.98
5033 9780 2.290896 CCTTTGCCATGTCCTTCCACTA 60.291 50.000 0.00 0.00 0.00 2.74
5160 9911 2.286121 AGAAATGGAGGCCCCCGA 60.286 61.111 0.00 0.00 0.00 5.14
5206 9957 2.032799 GCAATCGATACATGGCCGAAAA 59.967 45.455 0.00 0.00 35.87 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.