Multiple sequence alignment - TraesCS7A01G202900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G202900 chr7A 100.000 6623 0 0 1 6623 164667030 164660408 0.000000e+00 12231.0
1 TraesCS7A01G202900 chr7A 78.388 546 105 11 5206 5741 164742988 164742446 6.360000e-90 342.0
2 TraesCS7A01G202900 chr7A 85.950 242 14 7 2348 2589 130091531 130091752 2.390000e-59 241.0
3 TraesCS7A01G202900 chr7A 84.184 196 29 2 3065 3259 714867843 714868037 8.770000e-44 189.0
4 TraesCS7A01G202900 chr7A 92.623 122 9 0 1214 1335 164720826 164720705 6.830000e-40 176.0
5 TraesCS7A01G202900 chr7A 88.618 123 8 3 1216 1335 164744864 164744745 1.920000e-30 145.0
6 TraesCS7A01G202900 chr7A 91.071 56 2 1 3959 4011 164663029 164662974 9.210000e-09 73.1
7 TraesCS7A01G202900 chr7A 91.071 56 2 1 4002 4057 164663072 164663020 9.210000e-09 73.1
8 TraesCS7A01G202900 chr7A 90.000 50 1 2 3783 3828 611489386 611489435 1.990000e-05 62.1
9 TraesCS7A01G202900 chr7B 92.114 1547 74 25 4783 6316 125607364 125605853 0.000000e+00 2137.0
10 TraesCS7A01G202900 chr7B 86.510 1401 106 40 717 2055 125610046 125608667 0.000000e+00 1463.0
11 TraesCS7A01G202900 chr7B 88.146 658 50 17 3998 4640 125608041 125607397 0.000000e+00 758.0
12 TraesCS7A01G202900 chr7B 90.171 468 26 11 3257 3710 125608670 125608209 5.720000e-165 592.0
13 TraesCS7A01G202900 chr7B 91.809 293 22 2 420 712 125610415 125610125 2.220000e-109 407.0
14 TraesCS7A01G202900 chr7B 89.577 307 19 7 6327 6623 125605779 125605476 1.740000e-100 377.0
15 TraesCS7A01G202900 chr7B 78.428 547 103 12 5206 5741 125724698 125724156 6.360000e-90 342.0
16 TraesCS7A01G202900 chr7B 89.558 249 21 2 2348 2596 92063038 92063281 1.790000e-80 311.0
17 TraesCS7A01G202900 chr7B 85.542 166 17 2 3845 4003 125608159 125607994 4.110000e-37 167.0
18 TraesCS7A01G202900 chr7B 91.818 110 6 2 1229 1335 125726160 125726051 4.140000e-32 150.0
19 TraesCS7A01G202900 chr7B 87.200 125 10 3 1214 1335 125685974 125685853 3.220000e-28 137.0
20 TraesCS7A01G202900 chr7B 90.000 50 5 0 3779 3828 521567888 521567937 1.540000e-06 65.8
21 TraesCS7A01G202900 chr7B 89.130 46 5 0 3783 3828 531893244 531893199 2.580000e-04 58.4
22 TraesCS7A01G202900 chr7D 87.762 1528 123 34 4623 6113 163374578 163373078 0.000000e+00 1727.0
23 TraesCS7A01G202900 chr7D 83.366 1028 72 39 1098 2064 163376747 163375758 0.000000e+00 859.0
24 TraesCS7A01G202900 chr7D 88.683 539 52 6 2061 2596 421864907 421864375 0.000000e+00 649.0
25 TraesCS7A01G202900 chr7D 82.601 592 53 22 4014 4572 163375150 163374576 1.670000e-130 477.0
26 TraesCS7A01G202900 chr7D 86.530 438 31 19 3283 3703 163375759 163375333 2.180000e-124 457.0
27 TraesCS7A01G202900 chr7D 87.887 355 24 12 717 1065 163377086 163376745 3.720000e-107 399.0
28 TraesCS7A01G202900 chr7D 80.110 543 85 19 5238 5763 163489547 163489011 3.750000e-102 383.0
29 TraesCS7A01G202900 chr7D 78.832 548 97 14 5206 5741 163532958 163532418 1.060000e-92 351.0
30 TraesCS7A01G202900 chr7D 87.119 295 19 5 426 712 163377441 163377158 3.850000e-82 316.0
31 TraesCS7A01G202900 chr7D 86.345 249 14 7 2348 2596 131269412 131269640 3.070000e-63 254.0
32 TraesCS7A01G202900 chr7D 86.082 194 24 3 3065 3256 421864715 421864907 8.710000e-49 206.0
33 TraesCS7A01G202900 chr7D 92.623 122 6 1 1214 1335 163490755 163490637 8.830000e-39 172.0
34 TraesCS7A01G202900 chr7D 85.256 156 9 5 6161 6316 163373064 163372923 1.490000e-31 148.0
35 TraesCS7A01G202900 chr7D 87.931 116 12 1 6404 6519 454079227 454079114 1.160000e-27 135.0
36 TraesCS7A01G202900 chr7D 88.034 117 7 5 1229 1339 163534410 163534295 1.500000e-26 132.0
37 TraesCS7A01G202900 chr1A 89.231 1235 89 18 2061 3258 84274115 84272888 0.000000e+00 1504.0
38 TraesCS7A01G202900 chr1A 91.667 192 16 0 3065 3256 84273924 84274115 3.940000e-67 267.0
39 TraesCS7A01G202900 chr1A 90.909 44 4 0 3788 3831 171453440 171453397 7.170000e-05 60.2
40 TraesCS7A01G202900 chrUn 86.910 1039 74 29 2277 3259 75945336 75944304 0.000000e+00 1109.0
41 TraesCS7A01G202900 chrUn 90.625 192 17 1 2061 2251 75944307 75944498 3.070000e-63 254.0
42 TraesCS7A01G202900 chrUn 85.789 190 25 2 3071 3259 42434646 42434458 4.050000e-47 200.0
43 TraesCS7A01G202900 chrUn 88.119 101 12 0 6400 6500 96471029 96471129 3.240000e-23 121.0
44 TraesCS7A01G202900 chr6B 86.910 1039 75 29 2277 3259 9966537 9967570 0.000000e+00 1109.0
45 TraesCS7A01G202900 chr6B 91.146 192 16 1 2061 2251 9967567 9967376 6.590000e-65 259.0
46 TraesCS7A01G202900 chr6B 88.542 192 21 1 2050 2240 9966344 9966535 1.440000e-56 231.0
47 TraesCS7A01G202900 chr5B 88.454 537 52 7 2721 3257 37097999 37098525 2.010000e-179 640.0
48 TraesCS7A01G202900 chr4B 86.184 456 41 18 3264 3702 261787582 261787132 2.160000e-129 473.0
49 TraesCS7A01G202900 chr4B 84.034 119 17 2 6401 6519 586900995 586901111 5.430000e-21 113.0
50 TraesCS7A01G202900 chr4B 92.683 41 3 0 3788 3828 453767759 453767799 7.170000e-05 60.2
51 TraesCS7A01G202900 chr6A 86.726 226 25 2 2362 2587 17057856 17057636 5.130000e-61 246.0
52 TraesCS7A01G202900 chr6A 97.674 43 1 0 3788 3830 51757301 51757259 2.560000e-09 75.0
53 TraesCS7A01G202900 chr3D 83.898 236 33 2 2361 2596 418208366 418208136 3.110000e-53 220.0
54 TraesCS7A01G202900 chr3D 82.123 179 27 5 2057 2232 82554592 82554768 1.490000e-31 148.0
55 TraesCS7A01G202900 chr3D 83.051 118 18 1 6406 6523 7167382 7167267 9.080000e-19 106.0
56 TraesCS7A01G202900 chr3D 89.130 46 5 0 3783 3828 437829138 437829183 2.580000e-04 58.4
57 TraesCS7A01G202900 chr1B 85.027 187 26 2 3071 3256 333489776 333489961 8.770000e-44 189.0
58 TraesCS7A01G202900 chr1B 89.362 47 5 0 3782 3828 250426857 250426903 7.170000e-05 60.2
59 TraesCS7A01G202900 chr1D 83.146 178 25 5 2061 2235 403047148 403046973 2.470000e-34 158.0
60 TraesCS7A01G202900 chr1D 82.386 176 24 7 2061 2232 415679660 415679832 5.350000e-31 147.0
61 TraesCS7A01G202900 chr5D 81.818 176 25 7 2061 2232 100124200 100124372 2.490000e-29 141.0
62 TraesCS7A01G202900 chr2B 83.969 131 15 5 6394 6522 243784817 243784691 3.240000e-23 121.0
63 TraesCS7A01G202900 chr4D 83.740 123 18 2 6401 6523 468361374 468361494 1.510000e-21 115.0
64 TraesCS7A01G202900 chr6D 84.746 118 12 5 6404 6519 156450512 156450399 5.430000e-21 113.0
65 TraesCS7A01G202900 chr2D 82.787 122 15 5 6404 6523 187642665 187642548 3.270000e-18 104.0
66 TraesCS7A01G202900 chr2D 90.769 65 5 1 6 70 49386771 49386708 1.180000e-12 86.1
67 TraesCS7A01G202900 chr3A 90.000 50 5 0 3779 3828 485530450 485530499 1.540000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G202900 chr7A 164660408 164667030 6622 True 12231.000000 12231 100.000000 1 6623 1 chr7A.!!$R1 6622
1 TraesCS7A01G202900 chr7A 164742446 164744864 2418 True 243.500000 342 83.503000 1216 5741 2 chr7A.!!$R4 4525
2 TraesCS7A01G202900 chr7B 125605476 125610415 4939 True 843.000000 2137 89.124143 420 6623 7 chr7B.!!$R3 6203
3 TraesCS7A01G202900 chr7B 125724156 125726160 2004 True 246.000000 342 85.123000 1229 5741 2 chr7B.!!$R4 4512
4 TraesCS7A01G202900 chr7D 421864375 421864907 532 True 649.000000 649 88.683000 2061 2596 1 chr7D.!!$R1 535
5 TraesCS7A01G202900 chr7D 163372923 163377441 4518 True 626.142857 1727 85.788714 426 6316 7 chr7D.!!$R3 5890
6 TraesCS7A01G202900 chr7D 163489011 163490755 1744 True 277.500000 383 86.366500 1214 5763 2 chr7D.!!$R4 4549
7 TraesCS7A01G202900 chr7D 163532418 163534410 1992 True 241.500000 351 83.433000 1229 5741 2 chr7D.!!$R5 4512
8 TraesCS7A01G202900 chr1A 84272888 84274115 1227 True 1504.000000 1504 89.231000 2061 3258 1 chr1A.!!$R1 1197
9 TraesCS7A01G202900 chrUn 75944304 75945336 1032 True 1109.000000 1109 86.910000 2277 3259 1 chrUn.!!$R2 982
10 TraesCS7A01G202900 chr6B 9966344 9967570 1226 False 670.000000 1109 87.726000 2050 3259 2 chr6B.!!$F1 1209
11 TraesCS7A01G202900 chr5B 37097999 37098525 526 False 640.000000 640 88.454000 2721 3257 1 chr5B.!!$F1 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 264 0.035439 ATGGTTTACTCGGCCAGGTG 60.035 55.0 2.24 0.00 35.56 4.00 F
302 303 0.107752 CCCCATGGGCCAAATTTTCG 60.108 55.0 26.87 3.38 35.35 3.46 F
1224 1335 0.322906 CCAAGGGCAAGGAGGAGTTC 60.323 60.0 0.00 0.00 0.00 3.01 F
1225 1336 0.695347 CAAGGGCAAGGAGGAGTTCT 59.305 55.0 0.00 0.00 0.00 3.01 F
1789 1942 0.721154 CATATTCACACACGCACGCT 59.279 50.0 0.00 0.00 0.00 5.07 F
3506 3800 1.418373 CGTTGAGACGCACATGAGAA 58.582 50.0 0.00 0.00 43.03 2.87 F
3799 4108 0.035152 TCTACTGCCTCCGTTCGGTA 60.035 55.0 11.04 0.00 0.00 4.02 F
4304 4739 0.455633 AATCGTCGTGTGTCGCTACC 60.456 55.0 0.00 0.00 39.67 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1825 2003 0.037326 TCGGTGGTCTCACAAGATGC 60.037 55.000 0.00 0.00 45.32 3.91 R
1861 2060 0.103026 TGGCATGCTACTCGCTACAG 59.897 55.000 18.92 0.00 40.11 2.74 R
2221 2424 0.558712 AACCTTACTTGTGGGCCCAA 59.441 50.000 30.64 11.93 0.00 4.12 R
2589 2798 0.889186 ACTAACAACTTGGCGGCTGG 60.889 55.000 11.43 5.33 0.00 4.85 R
3716 4025 0.317603 GATACACCGACCGTCCATCG 60.318 60.000 0.00 0.00 39.33 3.84 R
4863 5761 0.238289 GTTTGACAGTCATGCACCCG 59.762 55.000 3.45 0.00 0.00 5.28 R
4866 5764 1.001378 GGTGGTTTGACAGTCATGCAC 60.001 52.381 3.45 1.97 0.00 4.57 R
5953 7356 1.611491 GGTCCTCACATTTTTCGCCAA 59.389 47.619 0.00 0.00 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.061848 GCCAATGTGGTGGACCGG 61.062 66.667 0.00 0.00 41.65 5.28
18 19 2.753701 CCAATGTGGTGGACCGGA 59.246 61.111 9.46 0.00 41.65 5.14
19 20 1.674322 CCAATGTGGTGGACCGGAC 60.674 63.158 9.46 0.00 41.65 4.79
20 21 2.032634 CAATGTGGTGGACCGGACG 61.033 63.158 9.46 0.00 39.43 4.79
21 22 3.248446 AATGTGGTGGACCGGACGG 62.248 63.158 9.46 9.56 39.43 4.79
24 25 4.707768 TGGTGGACCGGACGGGAT 62.708 66.667 9.46 0.00 39.97 3.85
25 26 3.396570 GGTGGACCGGACGGGATT 61.397 66.667 9.46 0.00 39.97 3.01
26 27 2.666812 GTGGACCGGACGGGATTT 59.333 61.111 9.46 0.00 39.97 2.17
27 28 1.002990 GTGGACCGGACGGGATTTT 60.003 57.895 9.46 0.00 39.97 1.82
28 29 0.607217 GTGGACCGGACGGGATTTTT 60.607 55.000 9.46 0.00 39.97 1.94
48 49 4.513198 TTTATGCCCAACCTTTTCTTCG 57.487 40.909 0.00 0.00 0.00 3.79
49 50 1.256812 ATGCCCAACCTTTTCTTCGG 58.743 50.000 0.00 0.00 0.00 4.30
50 51 0.106419 TGCCCAACCTTTTCTTCGGT 60.106 50.000 0.00 0.00 34.27 4.69
51 52 0.313987 GCCCAACCTTTTCTTCGGTG 59.686 55.000 0.00 0.00 32.86 4.94
52 53 0.313987 CCCAACCTTTTCTTCGGTGC 59.686 55.000 0.00 0.00 32.86 5.01
53 54 0.040425 CCAACCTTTTCTTCGGTGCG 60.040 55.000 0.00 0.00 32.86 5.34
54 55 0.040425 CAACCTTTTCTTCGGTGCGG 60.040 55.000 0.00 0.00 32.86 5.69
55 56 1.170290 AACCTTTTCTTCGGTGCGGG 61.170 55.000 0.00 0.00 32.86 6.13
56 57 2.561373 CTTTTCTTCGGTGCGGGC 59.439 61.111 0.00 0.00 0.00 6.13
57 58 2.203224 TTTTCTTCGGTGCGGGCA 60.203 55.556 0.00 0.00 0.00 5.36
58 59 2.187599 CTTTTCTTCGGTGCGGGCAG 62.188 60.000 0.00 0.00 0.00 4.85
112 113 4.717313 GGCGGTGGTGGAAGGGTC 62.717 72.222 0.00 0.00 0.00 4.46
113 114 3.637273 GCGGTGGTGGAAGGGTCT 61.637 66.667 0.00 0.00 0.00 3.85
114 115 3.157680 CGGTGGTGGAAGGGTCTT 58.842 61.111 0.00 0.00 0.00 3.01
115 116 1.833787 GCGGTGGTGGAAGGGTCTTA 61.834 60.000 0.00 0.00 0.00 2.10
116 117 0.688487 CGGTGGTGGAAGGGTCTTAA 59.312 55.000 0.00 0.00 0.00 1.85
117 118 1.338769 CGGTGGTGGAAGGGTCTTAAG 60.339 57.143 0.00 0.00 0.00 1.85
118 119 1.982958 GGTGGTGGAAGGGTCTTAAGA 59.017 52.381 0.00 0.00 0.00 2.10
119 120 2.576648 GGTGGTGGAAGGGTCTTAAGAT 59.423 50.000 8.75 0.00 0.00 2.40
120 121 3.370633 GGTGGTGGAAGGGTCTTAAGATC 60.371 52.174 8.75 7.97 0.00 2.75
121 122 2.844348 TGGTGGAAGGGTCTTAAGATCC 59.156 50.000 25.04 25.04 45.74 3.36
128 129 3.127425 GGGTCTTAAGATCCATTCCGG 57.873 52.381 26.98 0.00 44.75 5.14
138 139 2.577606 TCCATTCCGGACACAACAAT 57.422 45.000 1.83 0.00 39.64 2.71
139 140 3.704800 TCCATTCCGGACACAACAATA 57.295 42.857 1.83 0.00 39.64 1.90
140 141 3.605634 TCCATTCCGGACACAACAATAG 58.394 45.455 1.83 0.00 39.64 1.73
141 142 3.008594 TCCATTCCGGACACAACAATAGT 59.991 43.478 1.83 0.00 39.64 2.12
142 143 3.374058 CCATTCCGGACACAACAATAGTC 59.626 47.826 1.83 0.00 36.56 2.59
143 144 3.755112 TTCCGGACACAACAATAGTCA 57.245 42.857 1.83 0.00 34.04 3.41
144 145 3.973206 TCCGGACACAACAATAGTCAT 57.027 42.857 0.00 0.00 34.04 3.06
145 146 3.857052 TCCGGACACAACAATAGTCATC 58.143 45.455 0.00 0.00 34.04 2.92
146 147 2.603110 CCGGACACAACAATAGTCATCG 59.397 50.000 0.00 0.00 34.04 3.84
147 148 2.603110 CGGACACAACAATAGTCATCGG 59.397 50.000 0.00 0.00 34.04 4.18
148 149 2.351726 GGACACAACAATAGTCATCGGC 59.648 50.000 0.00 0.00 34.04 5.54
149 150 1.999735 ACACAACAATAGTCATCGGCG 59.000 47.619 0.00 0.00 0.00 6.46
150 151 1.327460 CACAACAATAGTCATCGGCGG 59.673 52.381 7.21 0.00 0.00 6.13
151 152 0.304705 CAACAATAGTCATCGGCGGC 59.695 55.000 7.21 0.00 0.00 6.53
152 153 1.151777 AACAATAGTCATCGGCGGCG 61.152 55.000 27.15 27.15 0.00 6.46
153 154 1.299850 CAATAGTCATCGGCGGCGA 60.300 57.895 36.40 36.40 0.00 5.54
154 155 0.667487 CAATAGTCATCGGCGGCGAT 60.667 55.000 37.39 37.39 0.00 4.58
183 184 4.789123 GGGAGGCGGCGGCTAAAA 62.789 66.667 36.29 0.00 38.98 1.52
184 185 3.506096 GGAGGCGGCGGCTAAAAC 61.506 66.667 36.29 22.66 38.98 2.43
185 186 2.436115 GAGGCGGCGGCTAAAACT 60.436 61.111 36.29 13.83 38.98 2.66
186 187 1.153509 GAGGCGGCGGCTAAAACTA 60.154 57.895 36.29 0.00 38.98 2.24
187 188 0.532196 GAGGCGGCGGCTAAAACTAT 60.532 55.000 36.29 12.11 38.98 2.12
188 189 0.814010 AGGCGGCGGCTAAAACTATG 60.814 55.000 35.47 0.00 36.44 2.23
189 190 1.647084 GCGGCGGCTAAAACTATGG 59.353 57.895 9.78 0.00 35.83 2.74
190 191 1.647084 CGGCGGCTAAAACTATGGC 59.353 57.895 7.61 0.00 0.00 4.40
196 197 3.609103 GGCTAAAACTATGGCGATGTG 57.391 47.619 0.00 0.00 0.00 3.21
197 198 2.943033 GGCTAAAACTATGGCGATGTGT 59.057 45.455 0.00 0.00 0.00 3.72
198 199 3.242739 GGCTAAAACTATGGCGATGTGTG 60.243 47.826 0.00 0.00 0.00 3.82
199 200 3.621268 GCTAAAACTATGGCGATGTGTGA 59.379 43.478 0.00 0.00 0.00 3.58
200 201 4.094294 GCTAAAACTATGGCGATGTGTGAA 59.906 41.667 0.00 0.00 0.00 3.18
201 202 5.391523 GCTAAAACTATGGCGATGTGTGAAA 60.392 40.000 0.00 0.00 0.00 2.69
202 203 4.685169 AAACTATGGCGATGTGTGAAAG 57.315 40.909 0.00 0.00 0.00 2.62
203 204 3.610040 ACTATGGCGATGTGTGAAAGA 57.390 42.857 0.00 0.00 0.00 2.52
204 205 3.937814 ACTATGGCGATGTGTGAAAGAA 58.062 40.909 0.00 0.00 0.00 2.52
205 206 3.935203 ACTATGGCGATGTGTGAAAGAAG 59.065 43.478 0.00 0.00 0.00 2.85
206 207 2.542020 TGGCGATGTGTGAAAGAAGA 57.458 45.000 0.00 0.00 0.00 2.87
207 208 2.844946 TGGCGATGTGTGAAAGAAGAA 58.155 42.857 0.00 0.00 0.00 2.52
208 209 3.210227 TGGCGATGTGTGAAAGAAGAAA 58.790 40.909 0.00 0.00 0.00 2.52
209 210 3.250762 TGGCGATGTGTGAAAGAAGAAAG 59.749 43.478 0.00 0.00 0.00 2.62
210 211 3.498397 GGCGATGTGTGAAAGAAGAAAGA 59.502 43.478 0.00 0.00 0.00 2.52
211 212 4.154918 GGCGATGTGTGAAAGAAGAAAGAT 59.845 41.667 0.00 0.00 0.00 2.40
212 213 5.084722 GCGATGTGTGAAAGAAGAAAGATG 58.915 41.667 0.00 0.00 0.00 2.90
213 214 5.334414 GCGATGTGTGAAAGAAGAAAGATGT 60.334 40.000 0.00 0.00 0.00 3.06
214 215 6.075918 CGATGTGTGAAAGAAGAAAGATGTG 58.924 40.000 0.00 0.00 0.00 3.21
215 216 6.293081 CGATGTGTGAAAGAAGAAAGATGTGT 60.293 38.462 0.00 0.00 0.00 3.72
216 217 6.122850 TGTGTGAAAGAAGAAAGATGTGTG 57.877 37.500 0.00 0.00 0.00 3.82
217 218 5.647658 TGTGTGAAAGAAGAAAGATGTGTGT 59.352 36.000 0.00 0.00 0.00 3.72
218 219 6.821160 TGTGTGAAAGAAGAAAGATGTGTGTA 59.179 34.615 0.00 0.00 0.00 2.90
219 220 7.011389 TGTGTGAAAGAAGAAAGATGTGTGTAG 59.989 37.037 0.00 0.00 0.00 2.74
220 221 7.011482 GTGTGAAAGAAGAAAGATGTGTGTAGT 59.989 37.037 0.00 0.00 0.00 2.73
221 222 8.201464 TGTGAAAGAAGAAAGATGTGTGTAGTA 58.799 33.333 0.00 0.00 0.00 1.82
222 223 8.704234 GTGAAAGAAGAAAGATGTGTGTAGTAG 58.296 37.037 0.00 0.00 0.00 2.57
223 224 7.872993 TGAAAGAAGAAAGATGTGTGTAGTAGG 59.127 37.037 0.00 0.00 0.00 3.18
224 225 6.287589 AGAAGAAAGATGTGTGTAGTAGGG 57.712 41.667 0.00 0.00 0.00 3.53
225 226 5.187967 AGAAGAAAGATGTGTGTAGTAGGGG 59.812 44.000 0.00 0.00 0.00 4.79
226 227 4.684724 AGAAAGATGTGTGTAGTAGGGGA 58.315 43.478 0.00 0.00 0.00 4.81
227 228 4.712337 AGAAAGATGTGTGTAGTAGGGGAG 59.288 45.833 0.00 0.00 0.00 4.30
228 229 3.033659 AGATGTGTGTAGTAGGGGAGG 57.966 52.381 0.00 0.00 0.00 4.30
229 230 2.040178 GATGTGTGTAGTAGGGGAGGG 58.960 57.143 0.00 0.00 0.00 4.30
230 231 0.042131 TGTGTGTAGTAGGGGAGGGG 59.958 60.000 0.00 0.00 0.00 4.79
231 232 0.337428 GTGTGTAGTAGGGGAGGGGA 59.663 60.000 0.00 0.00 0.00 4.81
232 233 0.635009 TGTGTAGTAGGGGAGGGGAG 59.365 60.000 0.00 0.00 0.00 4.30
233 234 0.105607 GTGTAGTAGGGGAGGGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
234 235 1.301913 TGTAGTAGGGGAGGGGAGGG 61.302 65.000 0.00 0.00 0.00 4.30
235 236 1.707691 TAGTAGGGGAGGGGAGGGG 60.708 68.421 0.00 0.00 0.00 4.79
236 237 4.188511 GTAGGGGAGGGGAGGGGG 62.189 77.778 0.00 0.00 0.00 5.40
237 238 4.431947 TAGGGGAGGGGAGGGGGA 62.432 72.222 0.00 0.00 0.00 4.81
241 242 4.179599 GGAGGGGAGGGGGAGGAG 62.180 77.778 0.00 0.00 0.00 3.69
242 243 4.179599 GAGGGGAGGGGGAGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
243 244 4.761304 AGGGGAGGGGGAGGAGGA 62.761 72.222 0.00 0.00 0.00 3.71
244 245 3.707189 GGGGAGGGGGAGGAGGAA 61.707 72.222 0.00 0.00 0.00 3.36
245 246 2.712746 GGGAGGGGGAGGAGGAAT 59.287 66.667 0.00 0.00 0.00 3.01
246 247 1.772156 GGGAGGGGGAGGAGGAATG 60.772 68.421 0.00 0.00 0.00 2.67
247 248 1.772156 GGAGGGGGAGGAGGAATGG 60.772 68.421 0.00 0.00 0.00 3.16
248 249 1.004891 GAGGGGGAGGAGGAATGGT 59.995 63.158 0.00 0.00 0.00 3.55
249 250 0.624795 GAGGGGGAGGAGGAATGGTT 60.625 60.000 0.00 0.00 0.00 3.67
250 251 0.178801 AGGGGGAGGAGGAATGGTTT 60.179 55.000 0.00 0.00 0.00 3.27
251 252 1.083912 AGGGGGAGGAGGAATGGTTTA 59.916 52.381 0.00 0.00 0.00 2.01
252 253 1.214673 GGGGGAGGAGGAATGGTTTAC 59.785 57.143 0.00 0.00 0.00 2.01
253 254 2.206223 GGGGAGGAGGAATGGTTTACT 58.794 52.381 0.00 0.00 0.00 2.24
254 255 2.172930 GGGGAGGAGGAATGGTTTACTC 59.827 54.545 0.00 0.00 41.46 2.59
255 256 2.158943 GGGAGGAGGAATGGTTTACTCG 60.159 54.545 0.00 0.00 42.90 4.18
256 257 2.158943 GGAGGAGGAATGGTTTACTCGG 60.159 54.545 0.00 0.00 42.90 4.63
257 258 1.209747 AGGAGGAATGGTTTACTCGGC 59.790 52.381 0.00 0.00 42.90 5.54
258 259 1.664873 GAGGAATGGTTTACTCGGCC 58.335 55.000 0.00 0.00 33.16 6.13
259 260 0.988832 AGGAATGGTTTACTCGGCCA 59.011 50.000 2.24 0.00 36.64 5.36
260 261 1.065418 AGGAATGGTTTACTCGGCCAG 60.065 52.381 2.24 1.58 35.56 4.85
261 262 1.379527 GAATGGTTTACTCGGCCAGG 58.620 55.000 2.24 0.00 35.56 4.45
262 263 0.696501 AATGGTTTACTCGGCCAGGT 59.303 50.000 2.24 2.76 35.56 4.00
263 264 0.035439 ATGGTTTACTCGGCCAGGTG 60.035 55.000 2.24 0.00 35.56 4.00
264 265 1.376812 GGTTTACTCGGCCAGGTGG 60.377 63.158 2.24 0.00 38.53 4.61
265 266 1.675219 GTTTACTCGGCCAGGTGGA 59.325 57.895 2.24 0.00 37.39 4.02
266 267 0.391263 GTTTACTCGGCCAGGTGGAG 60.391 60.000 2.24 2.88 37.39 3.86
267 268 1.550130 TTTACTCGGCCAGGTGGAGG 61.550 60.000 2.24 0.00 37.39 4.30
268 269 2.449967 TTACTCGGCCAGGTGGAGGA 62.450 60.000 2.24 0.00 37.39 3.71
269 270 2.238319 TACTCGGCCAGGTGGAGGAT 62.238 60.000 2.24 0.00 37.39 3.24
270 271 3.083349 TCGGCCAGGTGGAGGATG 61.083 66.667 2.24 0.00 37.39 3.51
271 272 3.083349 CGGCCAGGTGGAGGATGA 61.083 66.667 2.24 0.00 37.39 2.92
272 273 2.592308 GGCCAGGTGGAGGATGAC 59.408 66.667 0.00 0.00 37.39 3.06
273 274 2.300967 GGCCAGGTGGAGGATGACA 61.301 63.158 0.00 0.00 37.39 3.58
274 275 1.685224 GCCAGGTGGAGGATGACAA 59.315 57.895 0.00 0.00 37.39 3.18
275 276 0.257039 GCCAGGTGGAGGATGACAAT 59.743 55.000 0.00 0.00 37.39 2.71
276 277 1.490490 GCCAGGTGGAGGATGACAATA 59.510 52.381 0.00 0.00 37.39 1.90
277 278 2.107204 GCCAGGTGGAGGATGACAATAT 59.893 50.000 0.00 0.00 37.39 1.28
278 279 3.435601 GCCAGGTGGAGGATGACAATATT 60.436 47.826 0.00 0.00 37.39 1.28
279 280 4.796606 CCAGGTGGAGGATGACAATATTT 58.203 43.478 0.00 0.00 37.39 1.40
280 281 5.690097 GCCAGGTGGAGGATGACAATATTTA 60.690 44.000 0.00 0.00 37.39 1.40
281 282 6.000219 CCAGGTGGAGGATGACAATATTTAG 59.000 44.000 0.00 0.00 37.39 1.85
282 283 6.183361 CCAGGTGGAGGATGACAATATTTAGA 60.183 42.308 0.00 0.00 37.39 2.10
283 284 6.708054 CAGGTGGAGGATGACAATATTTAGAC 59.292 42.308 0.00 0.00 0.00 2.59
284 285 5.998363 GGTGGAGGATGACAATATTTAGACC 59.002 44.000 0.00 0.00 0.00 3.85
285 286 5.998363 GTGGAGGATGACAATATTTAGACCC 59.002 44.000 0.00 0.00 0.00 4.46
286 287 5.073144 TGGAGGATGACAATATTTAGACCCC 59.927 44.000 0.00 0.00 0.00 4.95
287 288 5.073144 GGAGGATGACAATATTTAGACCCCA 59.927 44.000 0.00 0.00 0.00 4.96
288 289 6.240292 GGAGGATGACAATATTTAGACCCCAT 60.240 42.308 0.00 0.00 0.00 4.00
289 290 6.546484 AGGATGACAATATTTAGACCCCATG 58.454 40.000 0.00 0.00 0.00 3.66
290 291 5.711976 GGATGACAATATTTAGACCCCATGG 59.288 44.000 4.14 4.14 37.80 3.66
301 302 3.880040 CCCCATGGGCCAAATTTTC 57.120 52.632 26.87 0.00 35.35 2.29
302 303 0.107752 CCCCATGGGCCAAATTTTCG 60.108 55.000 26.87 3.38 35.35 3.46
303 304 0.107752 CCCATGGGCCAAATTTTCGG 60.108 55.000 20.41 2.44 0.00 4.30
304 305 0.612744 CCATGGGCCAAATTTTCGGT 59.387 50.000 11.89 0.00 0.00 4.69
305 306 1.675415 CCATGGGCCAAATTTTCGGTG 60.675 52.381 11.89 0.00 0.00 4.94
306 307 1.001860 CATGGGCCAAATTTTCGGTGT 59.998 47.619 11.89 0.00 0.00 4.16
307 308 1.996798 TGGGCCAAATTTTCGGTGTA 58.003 45.000 2.13 0.00 0.00 2.90
308 309 1.889829 TGGGCCAAATTTTCGGTGTAG 59.110 47.619 2.13 0.00 0.00 2.74
309 310 1.203758 GGGCCAAATTTTCGGTGTAGG 59.796 52.381 4.39 0.00 0.00 3.18
310 311 2.164338 GGCCAAATTTTCGGTGTAGGA 58.836 47.619 0.00 0.00 0.00 2.94
311 312 2.758423 GGCCAAATTTTCGGTGTAGGAT 59.242 45.455 0.00 0.00 0.00 3.24
312 313 3.194755 GGCCAAATTTTCGGTGTAGGATT 59.805 43.478 0.00 0.00 0.00 3.01
313 314 4.399934 GGCCAAATTTTCGGTGTAGGATTA 59.600 41.667 0.00 0.00 0.00 1.75
314 315 5.105675 GGCCAAATTTTCGGTGTAGGATTAA 60.106 40.000 0.00 0.00 0.00 1.40
315 316 6.406512 GGCCAAATTTTCGGTGTAGGATTAAT 60.407 38.462 0.00 0.00 0.00 1.40
316 317 7.201839 GGCCAAATTTTCGGTGTAGGATTAATA 60.202 37.037 0.00 0.00 0.00 0.98
317 318 8.192110 GCCAAATTTTCGGTGTAGGATTAATAA 58.808 33.333 0.00 0.00 0.00 1.40
348 349 7.424001 ACTCCTATAACCGATTTAGAACTTCG 58.576 38.462 0.00 0.00 0.00 3.79
366 367 6.663944 ACTTCGGCTAAGTGTGATTTATTC 57.336 37.500 3.32 0.00 46.90 1.75
367 368 6.170506 ACTTCGGCTAAGTGTGATTTATTCA 58.829 36.000 3.32 0.00 46.90 2.57
368 369 6.313905 ACTTCGGCTAAGTGTGATTTATTCAG 59.686 38.462 3.32 0.00 46.90 3.02
369 370 5.730550 TCGGCTAAGTGTGATTTATTCAGT 58.269 37.500 0.00 0.00 34.17 3.41
370 371 6.869695 TCGGCTAAGTGTGATTTATTCAGTA 58.130 36.000 0.00 0.00 34.17 2.74
371 372 7.324935 TCGGCTAAGTGTGATTTATTCAGTAA 58.675 34.615 0.00 0.00 34.17 2.24
372 373 7.820386 TCGGCTAAGTGTGATTTATTCAGTAAA 59.180 33.333 0.00 0.00 36.75 2.01
373 374 8.116753 CGGCTAAGTGTGATTTATTCAGTAAAG 58.883 37.037 0.00 0.00 35.83 1.85
374 375 8.947115 GGCTAAGTGTGATTTATTCAGTAAAGT 58.053 33.333 0.00 0.00 35.83 2.66
402 403 9.847224 AACTGAAATTTTACTCTTAGTCCTTGA 57.153 29.630 0.00 0.00 0.00 3.02
403 404 9.847224 ACTGAAATTTTACTCTTAGTCCTTGAA 57.153 29.630 0.00 0.00 0.00 2.69
405 406 8.784043 TGAAATTTTACTCTTAGTCCTTGAAGC 58.216 33.333 0.00 0.00 0.00 3.86
406 407 7.689446 AATTTTACTCTTAGTCCTTGAAGCC 57.311 36.000 0.00 0.00 0.00 4.35
407 408 5.818678 TTTACTCTTAGTCCTTGAAGCCA 57.181 39.130 0.00 0.00 0.00 4.75
408 409 6.374417 TTTACTCTTAGTCCTTGAAGCCAT 57.626 37.500 0.00 0.00 0.00 4.40
409 410 4.479786 ACTCTTAGTCCTTGAAGCCATC 57.520 45.455 0.00 0.00 0.00 3.51
410 411 3.840666 ACTCTTAGTCCTTGAAGCCATCA 59.159 43.478 0.00 0.00 35.85 3.07
411 412 4.187694 CTCTTAGTCCTTGAAGCCATCAC 58.812 47.826 0.00 0.00 37.92 3.06
412 413 3.582647 TCTTAGTCCTTGAAGCCATCACA 59.417 43.478 0.00 0.00 37.92 3.58
413 414 4.225942 TCTTAGTCCTTGAAGCCATCACAT 59.774 41.667 0.00 0.00 37.92 3.21
414 415 2.996631 AGTCCTTGAAGCCATCACATC 58.003 47.619 0.00 0.00 37.92 3.06
415 416 2.306805 AGTCCTTGAAGCCATCACATCA 59.693 45.455 0.00 0.00 37.92 3.07
416 417 2.421424 GTCCTTGAAGCCATCACATCAC 59.579 50.000 0.00 0.00 37.92 3.06
417 418 1.747355 CCTTGAAGCCATCACATCACC 59.253 52.381 0.00 0.00 37.92 4.02
418 419 1.399440 CTTGAAGCCATCACATCACCG 59.601 52.381 0.00 0.00 37.92 4.94
472 473 3.133464 CCCCATGCGTCAATGCGT 61.133 61.111 0.00 0.00 37.81 5.24
493 495 4.490959 CGTGAGTCGTAATTAAGCAAGCAG 60.491 45.833 0.00 0.00 34.52 4.24
529 531 1.586564 CCGCGAAGTCACTCGATCC 60.587 63.158 8.23 0.00 41.44 3.36
558 560 1.387084 GTGATCACGCGACAGTCTTTC 59.613 52.381 15.93 0.00 0.00 2.62
562 564 2.546778 TCACGCGACAGTCTTTCTTTT 58.453 42.857 15.93 0.00 0.00 2.27
563 565 2.284150 TCACGCGACAGTCTTTCTTTTG 59.716 45.455 15.93 0.00 0.00 2.44
587 597 1.399572 CGGAAGATACACGCGAGATG 58.600 55.000 15.93 2.56 0.00 2.90
600 610 2.536329 CGCGAGATGCACAAGAAATCAG 60.536 50.000 0.00 0.00 46.97 2.90
614 624 4.279145 AGAAATCAGTTACCGCTCTCCTA 58.721 43.478 0.00 0.00 0.00 2.94
621 631 2.815503 GTTACCGCTCTCCTATCTCTCC 59.184 54.545 0.00 0.00 0.00 3.71
639 649 5.002464 TCTCCCCTTTCGTTTACTTATCG 57.998 43.478 0.00 0.00 0.00 2.92
745 845 1.203994 ACGGGGATATATTCGCGAAGG 59.796 52.381 30.78 8.04 40.92 3.46
756 856 3.475944 GCGAAGGCGAGAGAAACC 58.524 61.111 0.00 0.00 40.82 3.27
761 861 0.531200 AAGGCGAGAGAAACCGGTAG 59.469 55.000 8.00 0.00 0.00 3.18
768 868 3.366679 CGAGAGAAACCGGTAGTTAAGCA 60.367 47.826 8.00 0.00 37.88 3.91
876 980 1.002250 GCGCCGTGGATATCAGTACG 61.002 60.000 15.32 15.32 36.39 3.67
931 1041 1.605058 CTATATCACCCCCGGCCTCG 61.605 65.000 0.00 0.00 0.00 4.63
960 1070 2.040278 CCAGTGCCTCTCCCTCCT 59.960 66.667 0.00 0.00 0.00 3.69
1024 1135 4.308458 CCAAGTCCGCGGTCACCA 62.308 66.667 27.15 1.01 0.00 4.17
1026 1137 4.309950 AAGTCCGCGGTCACCACC 62.310 66.667 27.15 5.47 39.69 4.61
1068 1179 5.280011 CCCGGCCAGTTATATTGAGAGTTAT 60.280 44.000 2.24 0.00 0.00 1.89
1069 1180 6.231211 CCGGCCAGTTATATTGAGAGTTATT 58.769 40.000 2.24 0.00 0.00 1.40
1070 1181 7.383687 CCGGCCAGTTATATTGAGAGTTATTA 58.616 38.462 2.24 0.00 0.00 0.98
1085 1196 5.248477 AGAGTTATTAGTGAAGGCTGTTCCA 59.752 40.000 0.00 0.00 37.29 3.53
1088 1199 0.690762 TAGTGAAGGCTGTTCCACCC 59.309 55.000 0.00 0.00 37.29 4.61
1089 1200 1.603739 GTGAAGGCTGTTCCACCCC 60.604 63.158 0.00 0.00 37.29 4.95
1090 1201 2.359975 GAAGGCTGTTCCACCCCG 60.360 66.667 0.00 0.00 37.29 5.73
1091 1202 3.920093 GAAGGCTGTTCCACCCCGG 62.920 68.421 0.00 0.00 37.29 5.73
1092 1203 4.974438 AGGCTGTTCCACCCCGGA 62.974 66.667 0.73 0.00 44.40 5.14
1093 1204 3.728373 GGCTGTTCCACCCCGGAT 61.728 66.667 0.73 0.00 45.80 4.18
1117 1228 4.635769 CCGCCATGGCTCTGTTTA 57.364 55.556 33.07 0.00 39.32 2.01
1119 1230 0.947244 CCGCCATGGCTCTGTTTATC 59.053 55.000 33.07 1.74 39.32 1.75
1223 1334 1.770324 CCAAGGGCAAGGAGGAGTT 59.230 57.895 0.00 0.00 0.00 3.01
1224 1335 0.322906 CCAAGGGCAAGGAGGAGTTC 60.323 60.000 0.00 0.00 0.00 3.01
1225 1336 0.695347 CAAGGGCAAGGAGGAGTTCT 59.305 55.000 0.00 0.00 0.00 3.01
1355 1469 2.054585 GTATTTACGTGGCGCGCG 60.055 61.111 28.44 28.44 46.11 6.86
1393 1507 2.219674 CGATCAATCGCTTTCTACCTGC 59.780 50.000 0.00 0.00 43.84 4.85
1473 1587 1.068816 TCTCGCGATCGAAAACTGACA 60.069 47.619 21.57 0.00 44.98 3.58
1474 1588 1.318785 CTCGCGATCGAAAACTGACAG 59.681 52.381 21.57 0.00 44.98 3.51
1477 1591 1.126846 GCGATCGAAAACTGACAGTGG 59.873 52.381 21.57 0.00 0.00 4.00
1478 1592 2.672714 CGATCGAAAACTGACAGTGGA 58.327 47.619 10.26 5.22 0.00 4.02
1593 1712 2.409975 ACCGGTATATATGCACGCAAC 58.590 47.619 4.49 0.00 0.00 4.17
1631 1768 5.804944 TTCTCTCTCTCCATGATTGATCC 57.195 43.478 0.00 0.00 0.00 3.36
1666 1819 2.094390 TGAGATGCGTACCCTGTTACAC 60.094 50.000 0.00 0.00 0.00 2.90
1673 1826 2.685100 GTACCCTGTTACACTGCTGTC 58.315 52.381 0.00 0.00 0.00 3.51
1690 1843 2.046314 CCTAGGTGCGGTTGTGGG 60.046 66.667 0.00 0.00 0.00 4.61
1745 1898 0.794473 CTTTCGGAGTTAACGTGGGC 59.206 55.000 0.00 0.00 0.00 5.36
1753 1906 3.565063 GGAGTTAACGTGGGCACTTTTAA 59.435 43.478 0.00 0.00 0.00 1.52
1760 1913 2.861335 CGTGGGCACTTTTAAAAACACC 59.139 45.455 1.66 3.55 0.00 4.16
1787 1940 1.459209 ACACATATTCACACACGCACG 59.541 47.619 0.00 0.00 0.00 5.34
1789 1942 0.721154 CATATTCACACACGCACGCT 59.279 50.000 0.00 0.00 0.00 5.07
1801 1969 1.421410 CGCACGCTCACCCTATGAAC 61.421 60.000 0.00 0.00 36.69 3.18
1816 1994 4.751600 CCTATGAACGCACACACATCATAT 59.248 41.667 0.00 0.00 33.78 1.78
1819 1997 2.988010 ACGCACACACATCATATCCT 57.012 45.000 0.00 0.00 0.00 3.24
1825 2003 5.119743 CGCACACACATCATATCCTTATGAG 59.880 44.000 2.54 0.00 45.59 2.90
1841 2019 2.462456 TGAGCATCTTGTGAGACCAC 57.538 50.000 0.00 0.00 38.92 4.16
1855 2054 2.280524 CCACCGAAGTCGCCACAA 60.281 61.111 0.00 0.00 38.18 3.33
1861 2060 3.249973 GAAGTCGCCACAAACGCCC 62.250 63.158 0.00 0.00 0.00 6.13
1867 2066 2.978018 GCCACAAACGCCCTGTAGC 61.978 63.158 0.00 0.00 0.00 3.58
1940 2141 6.723298 AATCTTGTAAAACACAATCACCCA 57.277 33.333 0.00 0.00 45.96 4.51
1953 2154 2.787473 TCACCCATGCCAAAGTCTAG 57.213 50.000 0.00 0.00 0.00 2.43
2040 2241 8.856103 ACTACTTTTGCATAGTTGGTTAACAAT 58.144 29.630 8.10 0.00 41.95 2.71
2048 2249 7.613801 TGCATAGTTGGTTAACAATATTCCAGT 59.386 33.333 8.10 0.00 41.95 4.00
2075 2276 6.068931 CACACGAACGAGTATTTAACCAAAG 58.931 40.000 0.14 0.00 0.00 2.77
2076 2277 5.754890 ACACGAACGAGTATTTAACCAAAGT 59.245 36.000 0.14 0.00 0.00 2.66
2113 2315 2.543635 ACCGTACCCAGAAACTACCAT 58.456 47.619 0.00 0.00 0.00 3.55
2188 2391 4.718961 ACTATCAAGTGTGAAAAGTGCCT 58.281 39.130 0.00 0.00 37.30 4.75
2221 2424 4.002906 TCTAAACGCCTTTCTGACATGT 57.997 40.909 0.00 0.00 0.00 3.21
2245 2448 1.905637 CCCACAAGTAAGGTTGACCC 58.094 55.000 0.00 0.00 36.42 4.46
2275 2478 3.962063 TGACCGTTATTACAGATAGGGCA 59.038 43.478 0.00 0.00 32.10 5.36
2339 2542 5.293324 TGTGCATTACATCGAACAGGTTATC 59.707 40.000 0.00 0.00 33.42 1.75
2405 2608 3.068881 TCCGAGTGGAAGGCTTGG 58.931 61.111 3.46 0.00 42.85 3.61
2406 2609 2.747855 CCGAGTGGAAGGCTTGGC 60.748 66.667 3.46 0.00 37.49 4.52
2407 2610 2.348998 CGAGTGGAAGGCTTGGCT 59.651 61.111 3.46 0.00 0.00 4.75
2421 2624 2.914097 GGCTTGGCTGCACTTGGT 60.914 61.111 0.50 0.00 34.04 3.67
2459 2668 4.052229 CGTCCCCGAACTCGCTGT 62.052 66.667 0.00 0.00 38.18 4.40
2561 2770 1.613928 TAGGTCATGGCGGGGAACA 60.614 57.895 0.00 0.00 0.00 3.18
2576 2785 2.113243 GAACAAGGCGACCACCTCCT 62.113 60.000 0.00 0.00 39.93 3.69
2605 2814 2.912025 CCCAGCCGCCAAGTTGTT 60.912 61.111 1.45 0.00 0.00 2.83
2707 2938 4.201679 CATGCACATGGCCAGCCG 62.202 66.667 13.05 4.61 43.89 5.52
2772 3003 4.357947 GTGACCAGCCAGTCGCGA 62.358 66.667 3.71 3.71 44.76 5.87
3102 3381 4.051167 TGGGCCCAGCATGTCAGG 62.051 66.667 24.45 0.00 0.00 3.86
3116 3395 3.040147 TGTCAGGAAGGCGTTTAGAAG 57.960 47.619 0.00 0.00 0.00 2.85
3143 3422 1.757682 TCGGGCACTTTTCACACTTT 58.242 45.000 0.00 0.00 0.00 2.66
3204 3483 4.337985 TTCGCACAAAAACGTAAAGTGA 57.662 36.364 12.61 0.04 32.14 3.41
3216 3495 6.947644 AACGTAAAGTGATAGTTTTTGGGT 57.052 33.333 0.00 0.00 0.00 4.51
3227 3506 4.370094 AGTTTTTGGGTACGGTTCCATA 57.630 40.909 6.13 0.00 32.48 2.74
3259 3538 7.778853 TGGTAGTTTTTGGTTAAATACTCCACA 59.221 33.333 0.00 0.00 38.47 4.17
3260 3539 8.077991 GGTAGTTTTTGGTTAAATACTCCACAC 58.922 37.037 0.00 0.00 38.47 3.82
3261 3540 6.731164 AGTTTTTGGTTAAATACTCCACACG 58.269 36.000 0.00 0.00 34.37 4.49
3262 3541 6.543100 AGTTTTTGGTTAAATACTCCACACGA 59.457 34.615 0.00 0.00 34.37 4.35
3287 3566 2.162408 GAGCACAAACTAGATGGTTGCC 59.838 50.000 0.00 0.00 46.80 4.52
3305 3584 1.879796 GCCTGATTTAGATGGAGGGCG 60.880 57.143 0.00 0.00 0.00 6.13
3317 3596 6.195600 AGATGGAGGGCGGTATAAATAAAA 57.804 37.500 0.00 0.00 0.00 1.52
3394 3673 2.540973 CGGCGTCGAGATCTACAAATGA 60.541 50.000 1.44 0.00 39.00 2.57
3505 3799 3.107017 CGTTGAGACGCACATGAGA 57.893 52.632 0.00 0.00 43.03 3.27
3506 3800 1.418373 CGTTGAGACGCACATGAGAA 58.582 50.000 0.00 0.00 43.03 2.87
3584 3882 9.617975 GAAATGAATAGCCAATGATTTAGCTAC 57.382 33.333 8.40 0.29 40.41 3.58
3587 3885 7.282585 TGAATAGCCAATGATTTAGCTACACT 58.717 34.615 8.40 0.00 40.41 3.55
3628 3929 5.346281 CGAGACAAAGAAACTTTAGCGAGAT 59.654 40.000 0.00 0.00 0.00 2.75
3629 3930 6.453134 CGAGACAAAGAAACTTTAGCGAGATC 60.453 42.308 0.00 0.00 0.00 2.75
3631 3932 7.603651 AGACAAAGAAACTTTAGCGAGATCTA 58.396 34.615 0.00 0.00 0.00 1.98
3685 3992 1.466856 ACATGCAAGCACACCCTATG 58.533 50.000 0.00 0.00 0.00 2.23
3697 4006 4.780815 CACACCCTATGCTTTAGATTGGA 58.219 43.478 0.00 0.00 0.00 3.53
3710 4019 5.825593 TTAGATTGGACCAACTGAACTCT 57.174 39.130 9.67 9.86 0.00 3.24
3711 4020 4.713792 AGATTGGACCAACTGAACTCTT 57.286 40.909 9.67 0.00 0.00 2.85
3712 4021 4.646572 AGATTGGACCAACTGAACTCTTC 58.353 43.478 9.67 0.00 0.00 2.87
3714 4023 2.123589 TGGACCAACTGAACTCTTCCA 58.876 47.619 0.00 0.00 0.00 3.53
3715 4024 2.104792 TGGACCAACTGAACTCTTCCAG 59.895 50.000 0.00 0.00 36.53 3.86
3716 4025 2.147150 GACCAACTGAACTCTTCCAGC 58.853 52.381 0.00 0.00 33.90 4.85
3717 4026 1.151668 CCAACTGAACTCTTCCAGCG 58.848 55.000 0.00 0.00 33.90 5.18
3718 4027 1.270305 CCAACTGAACTCTTCCAGCGA 60.270 52.381 0.00 0.00 33.90 4.93
3719 4028 2.613977 CCAACTGAACTCTTCCAGCGAT 60.614 50.000 0.00 0.00 33.90 4.58
3720 4029 2.376808 ACTGAACTCTTCCAGCGATG 57.623 50.000 0.00 0.00 33.90 3.84
3721 4030 1.066573 ACTGAACTCTTCCAGCGATGG 60.067 52.381 15.12 15.12 33.90 3.51
3722 4031 1.205655 CTGAACTCTTCCAGCGATGGA 59.794 52.381 20.59 20.59 35.93 3.41
3723 4032 1.066858 TGAACTCTTCCAGCGATGGAC 60.067 52.381 24.58 10.53 37.76 4.02
3724 4033 0.108615 AACTCTTCCAGCGATGGACG 60.109 55.000 24.58 21.68 45.66 4.79
3725 4034 1.227089 CTCTTCCAGCGATGGACGG 60.227 63.158 24.58 18.07 42.83 4.79
3732 4041 4.430765 GCGATGGACGGTCGGTGT 62.431 66.667 1.43 0.00 42.83 4.16
3733 4042 3.055080 GCGATGGACGGTCGGTGTA 62.055 63.158 1.43 0.00 42.83 2.90
3734 4043 1.731700 CGATGGACGGTCGGTGTAT 59.268 57.895 1.43 0.00 38.46 2.29
3735 4044 0.317603 CGATGGACGGTCGGTGTATC 60.318 60.000 1.43 1.03 38.46 2.24
3739 4048 1.134936 TGGACGGTCGGTGTATCATTG 60.135 52.381 1.43 0.00 0.00 2.82
3773 4082 1.645710 AGACCATCGAGTTTCCCACT 58.354 50.000 0.00 0.00 39.07 4.00
3785 4094 3.910627 AGTTTCCCACTTGACCATCTACT 59.089 43.478 0.00 0.00 27.32 2.57
3786 4095 3.981071 TTCCCACTTGACCATCTACTG 57.019 47.619 0.00 0.00 0.00 2.74
3787 4096 1.555075 TCCCACTTGACCATCTACTGC 59.445 52.381 0.00 0.00 0.00 4.40
3788 4097 1.407437 CCCACTTGACCATCTACTGCC 60.407 57.143 0.00 0.00 0.00 4.85
3789 4098 1.556911 CCACTTGACCATCTACTGCCT 59.443 52.381 0.00 0.00 0.00 4.75
3790 4099 2.419297 CCACTTGACCATCTACTGCCTC 60.419 54.545 0.00 0.00 0.00 4.70
3791 4100 1.834263 ACTTGACCATCTACTGCCTCC 59.166 52.381 0.00 0.00 0.00 4.30
3792 4101 0.824109 TTGACCATCTACTGCCTCCG 59.176 55.000 0.00 0.00 0.00 4.63
3793 4102 0.324368 TGACCATCTACTGCCTCCGT 60.324 55.000 0.00 0.00 0.00 4.69
3794 4103 0.824759 GACCATCTACTGCCTCCGTT 59.175 55.000 0.00 0.00 0.00 4.44
3795 4104 0.824759 ACCATCTACTGCCTCCGTTC 59.175 55.000 0.00 0.00 0.00 3.95
3796 4105 0.249073 CCATCTACTGCCTCCGTTCG 60.249 60.000 0.00 0.00 0.00 3.95
3797 4106 0.249073 CATCTACTGCCTCCGTTCGG 60.249 60.000 4.74 4.74 0.00 4.30
3798 4107 0.683504 ATCTACTGCCTCCGTTCGGT 60.684 55.000 11.04 0.00 0.00 4.69
3799 4108 0.035152 TCTACTGCCTCCGTTCGGTA 60.035 55.000 11.04 0.00 0.00 4.02
3800 4109 1.030457 CTACTGCCTCCGTTCGGTAT 58.970 55.000 11.04 0.00 0.00 2.73
3801 4110 1.407979 CTACTGCCTCCGTTCGGTATT 59.592 52.381 11.04 0.00 0.00 1.89
3802 4111 1.477553 ACTGCCTCCGTTCGGTATTA 58.522 50.000 11.04 0.00 0.00 0.98
3803 4112 1.826720 ACTGCCTCCGTTCGGTATTAA 59.173 47.619 11.04 0.00 0.00 1.40
3804 4113 2.199236 CTGCCTCCGTTCGGTATTAAC 58.801 52.381 11.04 0.00 0.00 2.01
3805 4114 1.826720 TGCCTCCGTTCGGTATTAACT 59.173 47.619 11.04 0.00 0.00 2.24
3806 4115 2.199236 GCCTCCGTTCGGTATTAACTG 58.801 52.381 11.04 0.00 0.00 3.16
3807 4116 2.417787 GCCTCCGTTCGGTATTAACTGT 60.418 50.000 11.04 0.00 33.38 3.55
3808 4117 3.442100 CCTCCGTTCGGTATTAACTGTC 58.558 50.000 11.04 0.00 33.38 3.51
3809 4118 3.103738 CTCCGTTCGGTATTAACTGTCG 58.896 50.000 11.04 0.00 33.38 4.35
3810 4119 1.585214 CCGTTCGGTATTAACTGTCGC 59.415 52.381 2.82 0.00 33.05 5.19
3811 4120 2.523015 CGTTCGGTATTAACTGTCGCT 58.477 47.619 0.00 0.00 33.38 4.93
3812 4121 2.278094 CGTTCGGTATTAACTGTCGCTG 59.722 50.000 0.00 0.00 33.38 5.18
3813 4122 3.504863 GTTCGGTATTAACTGTCGCTGA 58.495 45.455 0.00 0.00 33.38 4.26
3814 4123 3.853831 TCGGTATTAACTGTCGCTGAA 57.146 42.857 0.00 0.00 33.38 3.02
3815 4124 4.177165 TCGGTATTAACTGTCGCTGAAA 57.823 40.909 0.00 0.00 33.38 2.69
3816 4125 4.751060 TCGGTATTAACTGTCGCTGAAAT 58.249 39.130 0.00 0.00 33.38 2.17
3817 4126 4.565166 TCGGTATTAACTGTCGCTGAAATG 59.435 41.667 0.00 0.00 33.38 2.32
3818 4127 4.565166 CGGTATTAACTGTCGCTGAAATGA 59.435 41.667 0.00 0.00 0.00 2.57
3819 4128 5.276395 CGGTATTAACTGTCGCTGAAATGAG 60.276 44.000 0.00 0.00 0.00 2.90
3820 4129 5.581085 GGTATTAACTGTCGCTGAAATGAGT 59.419 40.000 0.00 0.00 0.00 3.41
3821 4130 4.990543 TTAACTGTCGCTGAAATGAGTG 57.009 40.909 0.00 0.00 0.00 3.51
3822 4131 2.820059 ACTGTCGCTGAAATGAGTGA 57.180 45.000 0.00 0.00 0.00 3.41
3823 4132 3.111853 ACTGTCGCTGAAATGAGTGAA 57.888 42.857 0.00 0.00 34.31 3.18
3824 4133 3.668447 ACTGTCGCTGAAATGAGTGAAT 58.332 40.909 0.00 0.00 34.31 2.57
3825 4134 3.681897 ACTGTCGCTGAAATGAGTGAATC 59.318 43.478 0.00 0.00 34.31 2.52
3826 4135 3.930336 TGTCGCTGAAATGAGTGAATCT 58.070 40.909 0.00 0.00 34.31 2.40
3827 4136 5.072040 TGTCGCTGAAATGAGTGAATCTA 57.928 39.130 0.00 0.00 34.31 1.98
3828 4137 5.105063 TGTCGCTGAAATGAGTGAATCTAG 58.895 41.667 0.00 0.00 34.31 2.43
3829 4138 5.105756 TGTCGCTGAAATGAGTGAATCTAGA 60.106 40.000 0.00 0.00 34.31 2.43
3830 4139 5.231147 GTCGCTGAAATGAGTGAATCTAGAC 59.769 44.000 0.00 0.00 34.31 2.59
3831 4140 4.205996 CGCTGAAATGAGTGAATCTAGACG 59.794 45.833 0.00 0.00 0.00 4.18
3832 4141 4.026145 GCTGAAATGAGTGAATCTAGACGC 60.026 45.833 0.00 0.00 0.00 5.19
3833 4142 4.105486 TGAAATGAGTGAATCTAGACGCG 58.895 43.478 3.53 3.53 0.00 6.01
3834 4143 2.783828 ATGAGTGAATCTAGACGCGG 57.216 50.000 12.47 0.00 0.00 6.46
3835 4144 1.746470 TGAGTGAATCTAGACGCGGA 58.254 50.000 12.47 0.00 0.00 5.54
3836 4145 1.671328 TGAGTGAATCTAGACGCGGAG 59.329 52.381 12.47 4.65 0.00 4.63
3837 4146 1.002251 GAGTGAATCTAGACGCGGAGG 60.002 57.143 12.47 0.00 0.00 4.30
3838 4147 0.739561 GTGAATCTAGACGCGGAGGT 59.260 55.000 12.47 0.00 0.00 3.85
3839 4148 1.945394 GTGAATCTAGACGCGGAGGTA 59.055 52.381 12.47 0.00 0.00 3.08
3840 4149 2.357009 GTGAATCTAGACGCGGAGGTAA 59.643 50.000 12.47 0.00 0.00 2.85
3841 4150 3.004524 GTGAATCTAGACGCGGAGGTAAT 59.995 47.826 12.47 0.00 0.00 1.89
3842 4151 4.214971 GTGAATCTAGACGCGGAGGTAATA 59.785 45.833 12.47 0.00 0.00 0.98
3877 4186 2.648059 CCGCTCCCAAAAGAGATGAAT 58.352 47.619 0.00 0.00 35.82 2.57
3894 4205 1.824852 GAATTGTTTGCCTTCCCGGAT 59.175 47.619 0.73 0.00 33.16 4.18
3896 4207 2.588464 TTGTTTGCCTTCCCGGATAA 57.412 45.000 0.73 0.00 33.16 1.75
3910 4221 2.104792 CCGGATAAAGCAGAGGATGGAA 59.895 50.000 0.00 0.00 0.00 3.53
3912 4223 3.145286 GGATAAAGCAGAGGATGGAAGC 58.855 50.000 0.00 0.00 0.00 3.86
3942 4259 1.597742 GGCGTATCTACCTCGTGGTA 58.402 55.000 15.22 15.22 46.43 3.25
3957 4274 2.109126 GGTAAGAAGCCGCTGCCAG 61.109 63.158 0.00 0.00 38.69 4.85
3967 4284 2.202730 GCTGCCAGAGACGAGCTC 60.203 66.667 2.73 2.73 44.29 4.09
4005 4329 1.002684 GGAGTGCCGTATGACTAGACG 60.003 57.143 0.00 0.00 40.96 4.18
4007 4331 1.941294 AGTGCCGTATGACTAGACGAG 59.059 52.381 0.00 0.00 43.80 4.18
4008 4332 0.661552 TGCCGTATGACTAGACGAGC 59.338 55.000 0.00 2.79 43.80 5.03
4011 4335 1.192757 CCGTATGACTAGACGAGCTCG 59.807 57.143 33.45 33.45 43.80 5.03
4013 4337 2.211806 GTATGACTAGACGAGCTCGGT 58.788 52.381 36.93 25.63 44.95 4.69
4014 4338 1.752683 ATGACTAGACGAGCTCGGTT 58.247 50.000 36.93 26.34 44.95 4.44
4017 4341 1.062880 GACTAGACGAGCTCGGTTCAG 59.937 57.143 36.93 27.60 44.95 3.02
4019 4343 1.329292 CTAGACGAGCTCGGTTCAGAG 59.671 57.143 36.93 22.39 44.95 3.35
4020 4344 0.606944 AGACGAGCTCGGTTCAGAGT 60.607 55.000 36.93 15.99 44.95 3.24
4021 4345 1.085091 GACGAGCTCGGTTCAGAGTA 58.915 55.000 36.93 0.00 44.95 2.59
4022 4346 1.671845 GACGAGCTCGGTTCAGAGTAT 59.328 52.381 36.93 14.45 44.95 2.12
4023 4347 2.093106 ACGAGCTCGGTTCAGAGTATT 58.907 47.619 36.93 11.25 44.95 1.89
4024 4348 2.097791 ACGAGCTCGGTTCAGAGTATTC 59.902 50.000 36.93 0.00 44.95 1.75
4025 4349 2.722071 GAGCTCGGTTCAGAGTATTCG 58.278 52.381 0.00 0.00 40.26 3.34
4026 4350 2.355132 GAGCTCGGTTCAGAGTATTCGA 59.645 50.000 0.00 0.00 40.26 3.71
4027 4351 2.097791 AGCTCGGTTCAGAGTATTCGAC 59.902 50.000 0.00 0.00 40.26 4.20
4028 4352 2.706273 CTCGGTTCAGAGTATTCGACG 58.294 52.381 0.00 0.00 33.75 5.12
4029 4353 1.399440 TCGGTTCAGAGTATTCGACGG 59.601 52.381 0.00 0.00 0.00 4.79
4030 4354 1.399440 CGGTTCAGAGTATTCGACGGA 59.601 52.381 0.00 0.00 0.00 4.69
4031 4355 2.539142 CGGTTCAGAGTATTCGACGGAG 60.539 54.545 0.00 0.00 0.00 4.63
4049 4373 3.474600 GGAGTAGTGCCGTATGACTAGA 58.525 50.000 0.00 0.00 0.00 2.43
4075 4399 1.000955 TCTGGCCGAGAAACAGAAGAC 59.999 52.381 0.00 0.00 38.22 3.01
4167 4564 2.544267 AGAAGAAAGCGAAAACACCGAG 59.456 45.455 0.00 0.00 0.00 4.63
4234 4639 4.631813 GTCTTTACAGCAGGACCTAACATG 59.368 45.833 0.00 0.00 0.00 3.21
4300 4735 3.545078 AGTTATTAATCGTCGTGTGTCGC 59.455 43.478 0.00 0.00 39.67 5.19
4304 4739 0.455633 AATCGTCGTGTGTCGCTACC 60.456 55.000 0.00 0.00 39.67 3.18
4455 4915 0.724549 GTTTATGTGCACATCGCCGA 59.275 50.000 34.54 15.32 41.33 5.54
4469 4999 0.673644 CGCCGACAACCTCCATTTCT 60.674 55.000 0.00 0.00 0.00 2.52
4482 5012 6.842676 ACCTCCATTTCTAATTAGGTGGATC 58.157 40.000 23.43 0.00 36.03 3.36
4485 5015 7.079451 TCCATTTCTAATTAGGTGGATCCTC 57.921 40.000 21.24 9.56 44.42 3.71
4486 5016 6.044404 TCCATTTCTAATTAGGTGGATCCTCC 59.956 42.308 23.03 23.03 44.42 4.30
4487 5017 6.183361 CCATTTCTAATTAGGTGGATCCTCCA 60.183 42.308 29.93 14.34 45.98 3.86
4501 5036 6.472887 TGGATCCTCCAAAGTTTACAGTTAG 58.527 40.000 14.23 0.00 45.00 2.34
4504 5039 5.861727 TCCTCCAAAGTTTACAGTTAGACC 58.138 41.667 0.00 0.00 0.00 3.85
4523 5058 6.019656 AGACCTCTCTAACATGGAGTATCA 57.980 41.667 0.00 0.00 36.25 2.15
4767 5313 7.497773 AAAAGGTCAGCTAATTACTCCTACT 57.502 36.000 0.00 0.00 0.00 2.57
4773 5319 6.036191 GTCAGCTAATTACTCCTACTTGCAAC 59.964 42.308 0.00 0.00 0.00 4.17
4777 5323 6.532657 GCTAATTACTCCTACTTGCAACGTAA 59.467 38.462 0.00 0.00 0.00 3.18
4863 5761 3.113260 AGTCTTGCCGCCTTATGATAC 57.887 47.619 0.00 0.00 0.00 2.24
4866 5764 0.250124 TTGCCGCCTTATGATACGGG 60.250 55.000 2.17 0.00 45.72 5.28
4888 5786 1.956477 GCATGACTGTCAAACCACCTT 59.044 47.619 15.31 0.00 0.00 3.50
4929 5827 0.823460 AGAGAAGCAGCTAGGAGTGC 59.177 55.000 0.00 0.00 40.17 4.40
4953 5851 2.685897 TGTTGTCTTTGTTCTTTCCCCG 59.314 45.455 0.00 0.00 0.00 5.73
4954 5852 2.686405 GTTGTCTTTGTTCTTTCCCCGT 59.314 45.455 0.00 0.00 0.00 5.28
4955 5853 3.007473 TGTCTTTGTTCTTTCCCCGTT 57.993 42.857 0.00 0.00 0.00 4.44
4956 5854 2.685897 TGTCTTTGTTCTTTCCCCGTTG 59.314 45.455 0.00 0.00 0.00 4.10
4958 5856 2.946990 TCTTTGTTCTTTCCCCGTTGTC 59.053 45.455 0.00 0.00 0.00 3.18
4959 5857 2.721425 TTGTTCTTTCCCCGTTGTCT 57.279 45.000 0.00 0.00 0.00 3.41
4960 5858 3.842007 TTGTTCTTTCCCCGTTGTCTA 57.158 42.857 0.00 0.00 0.00 2.59
4961 5859 3.842007 TGTTCTTTCCCCGTTGTCTAA 57.158 42.857 0.00 0.00 0.00 2.10
5058 5956 6.821665 TGAGATTAGTTAAGGTATTGTGGCAC 59.178 38.462 11.55 11.55 0.00 5.01
5060 5958 7.346471 AGATTAGTTAAGGTATTGTGGCACAT 58.654 34.615 22.73 13.74 44.52 3.21
5097 5995 6.570672 TGACGTGTAGAGAAGTTGAACTAT 57.429 37.500 0.00 0.00 0.00 2.12
5108 6006 9.877178 AGAGAAGTTGAACTATCGATAAATTGT 57.123 29.630 6.58 0.00 0.00 2.71
5127 6025 1.144496 GCCGCCCGATGGTAACTAA 59.856 57.895 0.00 0.00 37.61 2.24
5200 6538 6.371548 AGACGTACAAAGATAATGCAACATGT 59.628 34.615 0.00 0.00 0.00 3.21
5201 6539 6.314018 ACGTACAAAGATAATGCAACATGTG 58.686 36.000 0.00 0.00 0.00 3.21
5202 6540 6.072728 ACGTACAAAGATAATGCAACATGTGT 60.073 34.615 0.00 0.00 0.00 3.72
5203 6541 6.801377 CGTACAAAGATAATGCAACATGTGTT 59.199 34.615 0.00 0.00 39.12 3.32
5204 6542 7.007367 CGTACAAAGATAATGCAACATGTGTTC 59.993 37.037 0.00 0.00 35.83 3.18
5205 6543 5.858049 ACAAAGATAATGCAACATGTGTTCG 59.142 36.000 0.00 0.00 35.83 3.95
5360 6710 1.439679 CAAACAGGGAGCCTAACGAC 58.560 55.000 0.00 0.00 29.64 4.34
5657 7027 6.379703 TCCCAATACCCTGTTATTTGTGATTG 59.620 38.462 0.00 0.00 0.00 2.67
5791 7170 5.507482 GCCTGTTTGTCTAGATATCGCAGTA 60.507 44.000 0.00 0.00 0.00 2.74
5802 7181 6.052840 AGATATCGCAGTAGTTTGCAAATG 57.947 37.500 16.21 10.54 44.28 2.32
5975 7378 2.039216 TGGCGAAAAATGTGAGGACCTA 59.961 45.455 0.00 0.00 0.00 3.08
6086 7492 9.617975 CCAAAGAAGACATGAATCTCTAAAAAC 57.382 33.333 0.00 0.00 0.00 2.43
6139 7545 9.620660 CCAAACAACTACTATTATTGTGTTTCC 57.379 33.333 0.00 0.00 36.69 3.13
6140 7546 9.325150 CAAACAACTACTATTATTGTGTTTCCG 57.675 33.333 0.00 0.00 36.69 4.30
6158 7564 9.698617 GTGTTTCCGAACTATTATTATTGTGTC 57.301 33.333 0.00 0.00 36.70 3.67
6177 7583 6.820335 TGTGTCCTTATCCATGTAGAATCTG 58.180 40.000 0.00 0.00 0.00 2.90
6178 7584 6.384015 TGTGTCCTTATCCATGTAGAATCTGT 59.616 38.462 0.00 0.00 0.00 3.41
6179 7585 6.926272 GTGTCCTTATCCATGTAGAATCTGTC 59.074 42.308 0.00 0.00 0.00 3.51
6180 7586 6.841229 TGTCCTTATCCATGTAGAATCTGTCT 59.159 38.462 0.00 0.00 40.71 3.41
6259 7665 6.041979 ACCAAAGAGGCACTGAATTTTATTGT 59.958 34.615 0.00 0.00 41.55 2.71
6304 7710 8.880878 AAATTGGTATTTAGTTTCACCACAAC 57.119 30.769 0.00 0.00 40.69 3.32
6316 7722 8.057536 AGTTTCACCACAACATTTTACTGTTA 57.942 30.769 0.00 0.00 37.25 2.41
6318 7724 8.588789 GTTTCACCACAACATTTTACTGTTAAC 58.411 33.333 0.00 0.00 37.25 2.01
6320 7726 8.734218 TCACCACAACATTTTACTGTTAACTA 57.266 30.769 7.22 0.00 37.25 2.24
6321 7727 8.832521 TCACCACAACATTTTACTGTTAACTAG 58.167 33.333 7.22 5.45 37.25 2.57
6322 7728 7.589954 CACCACAACATTTTACTGTTAACTAGC 59.410 37.037 7.22 0.00 37.25 3.42
6323 7729 7.501225 ACCACAACATTTTACTGTTAACTAGCT 59.499 33.333 7.22 0.00 37.25 3.32
6324 7730 7.803189 CCACAACATTTTACTGTTAACTAGCTG 59.197 37.037 7.22 0.00 37.25 4.24
6325 7731 7.803189 CACAACATTTTACTGTTAACTAGCTGG 59.197 37.037 7.22 0.00 37.25 4.85
6326 7732 7.501225 ACAACATTTTACTGTTAACTAGCTGGT 59.499 33.333 7.22 0.00 37.25 4.00
6327 7733 7.435068 ACATTTTACTGTTAACTAGCTGGTG 57.565 36.000 2.40 0.00 0.00 4.17
6330 7736 3.703001 ACTGTTAACTAGCTGGTGCAT 57.297 42.857 2.40 0.00 42.74 3.96
6331 7737 3.338249 ACTGTTAACTAGCTGGTGCATG 58.662 45.455 2.40 0.00 42.74 4.06
6332 7738 2.083774 TGTTAACTAGCTGGTGCATGC 58.916 47.619 11.82 11.82 42.74 4.06
6333 7739 2.083774 GTTAACTAGCTGGTGCATGCA 58.916 47.619 18.46 18.46 42.74 3.96
6337 7743 0.883153 CTAGCTGGTGCATGCAACAA 59.117 50.000 36.00 22.35 43.66 2.83
6338 7744 1.475280 CTAGCTGGTGCATGCAACAAT 59.525 47.619 36.00 28.62 43.66 2.71
6367 7836 7.173907 ACACATCTTGAGGTGAGATTTGTTTAG 59.826 37.037 19.98 0.00 40.00 1.85
6384 7853 4.631377 TGTTTAGCTGCTAGTGCACTTATG 59.369 41.667 27.06 16.28 45.31 1.90
6409 7878 7.719633 TGTAGAAACATAGCAAATAATCCCTCC 59.280 37.037 0.00 0.00 0.00 4.30
6410 7879 5.765182 AGAAACATAGCAAATAATCCCTCCG 59.235 40.000 0.00 0.00 0.00 4.63
6413 7882 5.063880 ACATAGCAAATAATCCCTCCGTTC 58.936 41.667 0.00 0.00 0.00 3.95
6414 7883 3.644966 AGCAAATAATCCCTCCGTTCA 57.355 42.857 0.00 0.00 0.00 3.18
6415 7884 3.279434 AGCAAATAATCCCTCCGTTCAC 58.721 45.455 0.00 0.00 0.00 3.18
6416 7885 3.013921 GCAAATAATCCCTCCGTTCACA 58.986 45.455 0.00 0.00 0.00 3.58
6417 7886 3.442273 GCAAATAATCCCTCCGTTCACAA 59.558 43.478 0.00 0.00 0.00 3.33
6476 7945 4.471904 ACAGACTGAAGTGAGTCAACAA 57.528 40.909 10.08 0.00 44.25 2.83
6478 7947 5.431765 ACAGACTGAAGTGAGTCAACAAAT 58.568 37.500 10.08 0.00 44.25 2.32
6483 7952 7.386299 AGACTGAAGTGAGTCAACAAATACATC 59.614 37.037 0.00 0.00 44.25 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.061848 CCGGTCCACCACATTGGC 61.062 66.667 0.00 0.00 42.67 4.52
1 2 1.674322 GTCCGGTCCACCACATTGG 60.674 63.158 0.00 0.00 45.02 3.16
4 5 3.702048 CCGTCCGGTCCACCACAT 61.702 66.667 0.00 0.00 35.14 3.21
7 8 4.707768 ATCCCGTCCGGTCCACCA 62.708 66.667 0.00 0.00 35.14 4.17
8 9 2.473891 AAAATCCCGTCCGGTCCACC 62.474 60.000 0.00 0.00 0.00 4.61
9 10 0.607217 AAAAATCCCGTCCGGTCCAC 60.607 55.000 0.00 0.00 0.00 4.02
10 11 1.762471 AAAAATCCCGTCCGGTCCA 59.238 52.632 0.00 0.00 0.00 4.02
11 12 4.728409 AAAAATCCCGTCCGGTCC 57.272 55.556 0.00 0.00 0.00 4.46
25 26 5.293560 CGAAGAAAAGGTTGGGCATAAAAA 58.706 37.500 0.00 0.00 0.00 1.94
26 27 4.262249 CCGAAGAAAAGGTTGGGCATAAAA 60.262 41.667 0.00 0.00 0.00 1.52
27 28 3.257127 CCGAAGAAAAGGTTGGGCATAAA 59.743 43.478 0.00 0.00 0.00 1.40
28 29 2.823154 CCGAAGAAAAGGTTGGGCATAA 59.177 45.455 0.00 0.00 0.00 1.90
29 30 2.224917 ACCGAAGAAAAGGTTGGGCATA 60.225 45.455 0.00 0.00 37.49 3.14
30 31 1.256812 CCGAAGAAAAGGTTGGGCAT 58.743 50.000 0.00 0.00 0.00 4.40
31 32 0.106419 ACCGAAGAAAAGGTTGGGCA 60.106 50.000 0.00 0.00 37.49 5.36
32 33 0.313987 CACCGAAGAAAAGGTTGGGC 59.686 55.000 0.00 0.00 39.00 5.36
33 34 0.313987 GCACCGAAGAAAAGGTTGGG 59.686 55.000 0.00 0.00 39.00 4.12
34 35 0.040425 CGCACCGAAGAAAAGGTTGG 60.040 55.000 0.00 0.00 39.00 3.77
35 36 0.040425 CCGCACCGAAGAAAAGGTTG 60.040 55.000 0.00 0.00 39.00 3.77
36 37 1.170290 CCCGCACCGAAGAAAAGGTT 61.170 55.000 0.00 0.00 39.00 3.50
37 38 1.599797 CCCGCACCGAAGAAAAGGT 60.600 57.895 0.00 0.00 42.34 3.50
38 39 2.978018 GCCCGCACCGAAGAAAAGG 61.978 63.158 0.00 0.00 0.00 3.11
39 40 2.187599 CTGCCCGCACCGAAGAAAAG 62.188 60.000 0.00 0.00 0.00 2.27
40 41 2.203224 TGCCCGCACCGAAGAAAA 60.203 55.556 0.00 0.00 0.00 2.29
41 42 2.668212 CTGCCCGCACCGAAGAAA 60.668 61.111 0.00 0.00 0.00 2.52
95 96 4.717313 GACCCTTCCACCACCGCC 62.717 72.222 0.00 0.00 0.00 6.13
96 97 1.833787 TAAGACCCTTCCACCACCGC 61.834 60.000 0.00 0.00 0.00 5.68
97 98 0.688487 TTAAGACCCTTCCACCACCG 59.312 55.000 0.00 0.00 0.00 4.94
98 99 1.982958 TCTTAAGACCCTTCCACCACC 59.017 52.381 0.00 0.00 0.00 4.61
99 100 3.370633 GGATCTTAAGACCCTTCCACCAC 60.371 52.174 8.84 0.00 0.00 4.16
100 101 2.844348 GGATCTTAAGACCCTTCCACCA 59.156 50.000 8.84 0.00 0.00 4.17
101 102 2.844348 TGGATCTTAAGACCCTTCCACC 59.156 50.000 17.20 7.02 27.82 4.61
102 103 4.779993 ATGGATCTTAAGACCCTTCCAC 57.220 45.455 22.14 1.78 33.73 4.02
103 104 4.166144 GGAATGGATCTTAAGACCCTTCCA 59.834 45.833 30.06 26.87 43.20 3.53
104 105 4.720046 GGAATGGATCTTAAGACCCTTCC 58.280 47.826 26.21 26.21 39.72 3.46
105 106 4.381411 CGGAATGGATCTTAAGACCCTTC 58.619 47.826 17.20 19.56 0.00 3.46
106 107 3.136626 CCGGAATGGATCTTAAGACCCTT 59.863 47.826 17.20 7.96 42.00 3.95
107 108 2.706190 CCGGAATGGATCTTAAGACCCT 59.294 50.000 17.20 6.72 42.00 4.34
108 109 2.704065 TCCGGAATGGATCTTAAGACCC 59.296 50.000 9.20 9.20 43.74 4.46
120 121 3.343617 ACTATTGTTGTGTCCGGAATGG 58.656 45.455 5.23 0.00 40.09 3.16
121 122 4.000325 TGACTATTGTTGTGTCCGGAATG 59.000 43.478 5.23 0.00 0.00 2.67
122 123 4.280436 TGACTATTGTTGTGTCCGGAAT 57.720 40.909 5.23 0.00 0.00 3.01
123 124 3.755112 TGACTATTGTTGTGTCCGGAA 57.245 42.857 5.23 0.00 0.00 4.30
124 125 3.674955 CGATGACTATTGTTGTGTCCGGA 60.675 47.826 0.00 0.00 0.00 5.14
125 126 2.603110 CGATGACTATTGTTGTGTCCGG 59.397 50.000 0.00 0.00 0.00 5.14
126 127 2.603110 CCGATGACTATTGTTGTGTCCG 59.397 50.000 0.00 0.00 0.00 4.79
127 128 2.351726 GCCGATGACTATTGTTGTGTCC 59.648 50.000 0.00 0.00 0.00 4.02
128 129 2.029244 CGCCGATGACTATTGTTGTGTC 59.971 50.000 0.00 0.00 0.00 3.67
129 130 1.999735 CGCCGATGACTATTGTTGTGT 59.000 47.619 0.00 0.00 0.00 3.72
130 131 1.327460 CCGCCGATGACTATTGTTGTG 59.673 52.381 0.00 0.00 0.00 3.33
131 132 1.651987 CCGCCGATGACTATTGTTGT 58.348 50.000 0.00 0.00 0.00 3.32
132 133 0.304705 GCCGCCGATGACTATTGTTG 59.695 55.000 0.00 0.00 0.00 3.33
133 134 1.151777 CGCCGCCGATGACTATTGTT 61.152 55.000 0.00 0.00 36.29 2.83
134 135 1.591594 CGCCGCCGATGACTATTGT 60.592 57.895 0.00 0.00 36.29 2.71
135 136 1.299850 TCGCCGCCGATGACTATTG 60.300 57.895 0.00 0.00 38.82 1.90
136 137 3.125607 TCGCCGCCGATGACTATT 58.874 55.556 0.00 0.00 38.82 1.73
166 167 4.789123 TTTTAGCCGCCGCCTCCC 62.789 66.667 0.00 0.00 34.57 4.30
167 168 2.582734 TAGTTTTAGCCGCCGCCTCC 62.583 60.000 0.00 0.00 34.57 4.30
168 169 0.532196 ATAGTTTTAGCCGCCGCCTC 60.532 55.000 0.00 0.00 34.57 4.70
169 170 0.814010 CATAGTTTTAGCCGCCGCCT 60.814 55.000 0.00 0.00 34.57 5.52
170 171 1.647084 CATAGTTTTAGCCGCCGCC 59.353 57.895 0.00 0.00 34.57 6.13
171 172 1.647084 CCATAGTTTTAGCCGCCGC 59.353 57.895 0.00 0.00 0.00 6.53
172 173 1.647084 GCCATAGTTTTAGCCGCCG 59.353 57.895 0.00 0.00 0.00 6.46
173 174 0.812412 TCGCCATAGTTTTAGCCGCC 60.812 55.000 0.00 0.00 0.00 6.13
174 175 1.069906 CATCGCCATAGTTTTAGCCGC 60.070 52.381 0.00 0.00 0.00 6.53
175 176 2.032894 CACATCGCCATAGTTTTAGCCG 60.033 50.000 0.00 0.00 0.00 5.52
176 177 2.943033 ACACATCGCCATAGTTTTAGCC 59.057 45.455 0.00 0.00 0.00 3.93
177 178 3.621268 TCACACATCGCCATAGTTTTAGC 59.379 43.478 0.00 0.00 0.00 3.09
178 179 5.794687 TTCACACATCGCCATAGTTTTAG 57.205 39.130 0.00 0.00 0.00 1.85
179 180 5.935206 TCTTTCACACATCGCCATAGTTTTA 59.065 36.000 0.00 0.00 0.00 1.52
180 181 4.759693 TCTTTCACACATCGCCATAGTTTT 59.240 37.500 0.00 0.00 0.00 2.43
181 182 4.323417 TCTTTCACACATCGCCATAGTTT 58.677 39.130 0.00 0.00 0.00 2.66
182 183 3.937814 TCTTTCACACATCGCCATAGTT 58.062 40.909 0.00 0.00 0.00 2.24
183 184 3.610040 TCTTTCACACATCGCCATAGT 57.390 42.857 0.00 0.00 0.00 2.12
184 185 4.183865 TCTTCTTTCACACATCGCCATAG 58.816 43.478 0.00 0.00 0.00 2.23
185 186 4.200838 TCTTCTTTCACACATCGCCATA 57.799 40.909 0.00 0.00 0.00 2.74
186 187 3.057969 TCTTCTTTCACACATCGCCAT 57.942 42.857 0.00 0.00 0.00 4.40
187 188 2.542020 TCTTCTTTCACACATCGCCA 57.458 45.000 0.00 0.00 0.00 5.69
188 189 3.498397 TCTTTCTTCTTTCACACATCGCC 59.502 43.478 0.00 0.00 0.00 5.54
189 190 4.732285 TCTTTCTTCTTTCACACATCGC 57.268 40.909 0.00 0.00 0.00 4.58
190 191 6.075918 CACATCTTTCTTCTTTCACACATCG 58.924 40.000 0.00 0.00 0.00 3.84
191 192 6.854892 CACACATCTTTCTTCTTTCACACATC 59.145 38.462 0.00 0.00 0.00 3.06
192 193 6.319658 ACACACATCTTTCTTCTTTCACACAT 59.680 34.615 0.00 0.00 0.00 3.21
193 194 5.647658 ACACACATCTTTCTTCTTTCACACA 59.352 36.000 0.00 0.00 0.00 3.72
194 195 6.124088 ACACACATCTTTCTTCTTTCACAC 57.876 37.500 0.00 0.00 0.00 3.82
195 196 7.047891 ACTACACACATCTTTCTTCTTTCACA 58.952 34.615 0.00 0.00 0.00 3.58
196 197 7.484035 ACTACACACATCTTTCTTCTTTCAC 57.516 36.000 0.00 0.00 0.00 3.18
197 198 7.872993 CCTACTACACACATCTTTCTTCTTTCA 59.127 37.037 0.00 0.00 0.00 2.69
198 199 7.332182 CCCTACTACACACATCTTTCTTCTTTC 59.668 40.741 0.00 0.00 0.00 2.62
199 200 7.162082 CCCTACTACACACATCTTTCTTCTTT 58.838 38.462 0.00 0.00 0.00 2.52
200 201 6.295916 CCCCTACTACACACATCTTTCTTCTT 60.296 42.308 0.00 0.00 0.00 2.52
201 202 5.187967 CCCCTACTACACACATCTTTCTTCT 59.812 44.000 0.00 0.00 0.00 2.85
202 203 5.187186 TCCCCTACTACACACATCTTTCTTC 59.813 44.000 0.00 0.00 0.00 2.87
203 204 5.091552 TCCCCTACTACACACATCTTTCTT 58.908 41.667 0.00 0.00 0.00 2.52
204 205 4.684724 TCCCCTACTACACACATCTTTCT 58.315 43.478 0.00 0.00 0.00 2.52
205 206 4.141914 CCTCCCCTACTACACACATCTTTC 60.142 50.000 0.00 0.00 0.00 2.62
206 207 3.775316 CCTCCCCTACTACACACATCTTT 59.225 47.826 0.00 0.00 0.00 2.52
207 208 3.375699 CCTCCCCTACTACACACATCTT 58.624 50.000 0.00 0.00 0.00 2.40
208 209 2.359355 CCCTCCCCTACTACACACATCT 60.359 54.545 0.00 0.00 0.00 2.90
209 210 2.040178 CCCTCCCCTACTACACACATC 58.960 57.143 0.00 0.00 0.00 3.06
210 211 1.344087 CCCCTCCCCTACTACACACAT 60.344 57.143 0.00 0.00 0.00 3.21
211 212 0.042131 CCCCTCCCCTACTACACACA 59.958 60.000 0.00 0.00 0.00 3.72
212 213 0.337428 TCCCCTCCCCTACTACACAC 59.663 60.000 0.00 0.00 0.00 3.82
213 214 0.635009 CTCCCCTCCCCTACTACACA 59.365 60.000 0.00 0.00 0.00 3.72
214 215 0.105607 CCTCCCCTCCCCTACTACAC 60.106 65.000 0.00 0.00 0.00 2.90
215 216 1.301913 CCCTCCCCTCCCCTACTACA 61.302 65.000 0.00 0.00 0.00 2.74
216 217 1.547760 CCCTCCCCTCCCCTACTAC 59.452 68.421 0.00 0.00 0.00 2.73
217 218 1.707691 CCCCTCCCCTCCCCTACTA 60.708 68.421 0.00 0.00 0.00 1.82
218 219 3.043404 CCCCTCCCCTCCCCTACT 61.043 72.222 0.00 0.00 0.00 2.57
219 220 4.188511 CCCCCTCCCCTCCCCTAC 62.189 77.778 0.00 0.00 0.00 3.18
220 221 4.431947 TCCCCCTCCCCTCCCCTA 62.432 72.222 0.00 0.00 0.00 3.53
224 225 4.179599 CTCCTCCCCCTCCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
225 226 4.179599 CCTCCTCCCCCTCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
226 227 4.761304 TCCTCCTCCCCCTCCCCT 62.761 72.222 0.00 0.00 0.00 4.79
227 228 3.054557 ATTCCTCCTCCCCCTCCCC 62.055 68.421 0.00 0.00 0.00 4.81
228 229 1.772156 CATTCCTCCTCCCCCTCCC 60.772 68.421 0.00 0.00 0.00 4.30
229 230 1.772156 CCATTCCTCCTCCCCCTCC 60.772 68.421 0.00 0.00 0.00 4.30
230 231 0.624795 AACCATTCCTCCTCCCCCTC 60.625 60.000 0.00 0.00 0.00 4.30
231 232 0.178801 AAACCATTCCTCCTCCCCCT 60.179 55.000 0.00 0.00 0.00 4.79
232 233 1.214673 GTAAACCATTCCTCCTCCCCC 59.785 57.143 0.00 0.00 0.00 5.40
233 234 2.172930 GAGTAAACCATTCCTCCTCCCC 59.827 54.545 0.00 0.00 0.00 4.81
234 235 2.158943 CGAGTAAACCATTCCTCCTCCC 60.159 54.545 0.00 0.00 0.00 4.30
235 236 2.158943 CCGAGTAAACCATTCCTCCTCC 60.159 54.545 0.00 0.00 0.00 4.30
236 237 2.742204 GCCGAGTAAACCATTCCTCCTC 60.742 54.545 0.00 0.00 0.00 3.71
237 238 1.209747 GCCGAGTAAACCATTCCTCCT 59.790 52.381 0.00 0.00 0.00 3.69
238 239 1.664873 GCCGAGTAAACCATTCCTCC 58.335 55.000 0.00 0.00 0.00 4.30
239 240 1.065709 TGGCCGAGTAAACCATTCCTC 60.066 52.381 0.00 0.00 0.00 3.71
240 241 0.988832 TGGCCGAGTAAACCATTCCT 59.011 50.000 0.00 0.00 0.00 3.36
241 242 1.379527 CTGGCCGAGTAAACCATTCC 58.620 55.000 0.00 0.00 31.79 3.01
242 243 1.339727 ACCTGGCCGAGTAAACCATTC 60.340 52.381 0.00 0.00 31.79 2.67
243 244 0.696501 ACCTGGCCGAGTAAACCATT 59.303 50.000 0.00 0.00 31.79 3.16
244 245 0.035439 CACCTGGCCGAGTAAACCAT 60.035 55.000 0.00 0.00 31.79 3.55
245 246 1.373435 CACCTGGCCGAGTAAACCA 59.627 57.895 0.00 0.00 0.00 3.67
246 247 1.376812 CCACCTGGCCGAGTAAACC 60.377 63.158 0.00 0.00 0.00 3.27
247 248 0.391263 CTCCACCTGGCCGAGTAAAC 60.391 60.000 0.00 0.00 34.44 2.01
248 249 1.550130 CCTCCACCTGGCCGAGTAAA 61.550 60.000 0.00 0.00 34.44 2.01
249 250 1.987855 CCTCCACCTGGCCGAGTAA 60.988 63.158 0.00 0.00 34.44 2.24
250 251 2.238319 ATCCTCCACCTGGCCGAGTA 62.238 60.000 0.00 0.00 34.44 2.59
251 252 3.625632 ATCCTCCACCTGGCCGAGT 62.626 63.158 0.00 0.00 34.44 4.18
252 253 2.765807 ATCCTCCACCTGGCCGAG 60.766 66.667 0.00 0.00 34.44 4.63
253 254 3.083349 CATCCTCCACCTGGCCGA 61.083 66.667 0.00 0.00 34.44 5.54
254 255 3.083349 TCATCCTCCACCTGGCCG 61.083 66.667 0.00 0.00 34.44 6.13
255 256 1.852157 TTGTCATCCTCCACCTGGCC 61.852 60.000 0.00 0.00 34.44 5.36
256 257 0.257039 ATTGTCATCCTCCACCTGGC 59.743 55.000 0.00 0.00 34.44 4.85
257 258 4.443978 AATATTGTCATCCTCCACCTGG 57.556 45.455 0.00 0.00 0.00 4.45
258 259 6.708054 GTCTAAATATTGTCATCCTCCACCTG 59.292 42.308 0.00 0.00 0.00 4.00
259 260 6.183361 GGTCTAAATATTGTCATCCTCCACCT 60.183 42.308 0.00 0.00 0.00 4.00
260 261 5.998363 GGTCTAAATATTGTCATCCTCCACC 59.002 44.000 0.00 0.00 0.00 4.61
261 262 5.998363 GGGTCTAAATATTGTCATCCTCCAC 59.002 44.000 0.00 0.00 0.00 4.02
262 263 5.073144 GGGGTCTAAATATTGTCATCCTCCA 59.927 44.000 0.00 0.00 0.00 3.86
263 264 5.073144 TGGGGTCTAAATATTGTCATCCTCC 59.927 44.000 0.00 0.00 0.00 4.30
264 265 6.187727 TGGGGTCTAAATATTGTCATCCTC 57.812 41.667 0.00 0.00 0.00 3.71
265 266 6.467775 CCATGGGGTCTAAATATTGTCATCCT 60.468 42.308 2.85 0.00 0.00 3.24
266 267 5.711976 CCATGGGGTCTAAATATTGTCATCC 59.288 44.000 2.85 0.00 0.00 3.51
267 268 5.711976 CCCATGGGGTCTAAATATTGTCATC 59.288 44.000 24.53 0.00 38.25 2.92
268 269 5.644188 CCCATGGGGTCTAAATATTGTCAT 58.356 41.667 24.53 0.00 38.25 3.06
269 270 4.691376 GCCCATGGGGTCTAAATATTGTCA 60.691 45.833 32.23 0.00 46.51 3.58
270 271 3.826729 GCCCATGGGGTCTAAATATTGTC 59.173 47.826 32.23 6.21 46.51 3.18
271 272 3.437931 GGCCCATGGGGTCTAAATATTGT 60.438 47.826 32.23 0.00 45.53 2.71
272 273 3.165071 GGCCCATGGGGTCTAAATATTG 58.835 50.000 32.23 1.97 45.53 1.90
273 274 3.542969 GGCCCATGGGGTCTAAATATT 57.457 47.619 32.23 0.00 45.53 1.28
282 283 0.991146 GAAAATTTGGCCCATGGGGT 59.009 50.000 32.23 0.00 46.51 4.95
284 285 0.107752 CCGAAAATTTGGCCCATGGG 60.108 55.000 27.87 27.87 38.57 4.00
285 286 0.612744 ACCGAAAATTTGGCCCATGG 59.387 50.000 4.14 4.14 34.93 3.66
286 287 1.001860 ACACCGAAAATTTGGCCCATG 59.998 47.619 0.00 0.00 34.93 3.66
287 288 1.347062 ACACCGAAAATTTGGCCCAT 58.653 45.000 0.00 0.00 34.93 4.00
288 289 1.889829 CTACACCGAAAATTTGGCCCA 59.110 47.619 0.00 0.00 34.93 5.36
289 290 1.203758 CCTACACCGAAAATTTGGCCC 59.796 52.381 0.00 0.00 34.93 5.80
290 291 2.164338 TCCTACACCGAAAATTTGGCC 58.836 47.619 0.00 0.00 34.93 5.36
291 292 4.450082 AATCCTACACCGAAAATTTGGC 57.550 40.909 0.00 0.00 34.93 4.52
322 323 8.562892 CGAAGTTCTAAATCGGTTATAGGAGTA 58.437 37.037 0.56 0.00 33.15 2.59
323 324 7.424001 CGAAGTTCTAAATCGGTTATAGGAGT 58.576 38.462 0.56 0.00 33.15 3.85
324 325 7.854934 CGAAGTTCTAAATCGGTTATAGGAG 57.145 40.000 0.56 0.00 33.15 3.69
334 335 4.863131 ACACTTAGCCGAAGTTCTAAATCG 59.137 41.667 0.56 0.00 46.79 3.34
335 336 5.867716 TCACACTTAGCCGAAGTTCTAAATC 59.132 40.000 0.56 0.00 46.79 2.17
336 337 5.790593 TCACACTTAGCCGAAGTTCTAAAT 58.209 37.500 0.56 0.00 46.79 1.40
337 338 5.204409 TCACACTTAGCCGAAGTTCTAAA 57.796 39.130 0.56 0.00 46.79 1.85
338 339 4.859304 TCACACTTAGCCGAAGTTCTAA 57.141 40.909 0.56 0.00 46.79 2.10
339 340 5.401531 AATCACACTTAGCCGAAGTTCTA 57.598 39.130 0.56 0.00 46.79 2.10
340 341 3.963428 ATCACACTTAGCCGAAGTTCT 57.037 42.857 0.56 0.00 46.79 3.01
341 342 6.663944 ATAAATCACACTTAGCCGAAGTTC 57.336 37.500 0.00 0.00 46.79 3.01
342 343 6.653320 TGAATAAATCACACTTAGCCGAAGTT 59.347 34.615 0.00 0.00 38.65 2.66
343 344 6.170506 TGAATAAATCACACTTAGCCGAAGT 58.829 36.000 0.00 0.00 40.24 3.01
344 345 6.313905 ACTGAATAAATCACACTTAGCCGAAG 59.686 38.462 0.00 0.00 36.17 3.79
345 346 6.170506 ACTGAATAAATCACACTTAGCCGAA 58.829 36.000 0.00 0.00 33.47 4.30
346 347 5.730550 ACTGAATAAATCACACTTAGCCGA 58.269 37.500 0.00 0.00 33.47 5.54
347 348 7.534085 TTACTGAATAAATCACACTTAGCCG 57.466 36.000 0.00 0.00 33.47 5.52
348 349 8.947115 ACTTTACTGAATAAATCACACTTAGCC 58.053 33.333 0.00 0.00 32.23 3.93
376 377 9.847224 TCAAGGACTAAGAGTAAAATTTCAGTT 57.153 29.630 0.00 0.00 0.00 3.16
377 378 9.847224 TTCAAGGACTAAGAGTAAAATTTCAGT 57.153 29.630 0.00 0.00 0.00 3.41
379 380 8.784043 GCTTCAAGGACTAAGAGTAAAATTTCA 58.216 33.333 0.00 0.00 0.00 2.69
380 381 8.237949 GGCTTCAAGGACTAAGAGTAAAATTTC 58.762 37.037 0.00 0.00 0.00 2.17
381 382 7.724061 TGGCTTCAAGGACTAAGAGTAAAATTT 59.276 33.333 0.00 0.00 0.00 1.82
382 383 7.231467 TGGCTTCAAGGACTAAGAGTAAAATT 58.769 34.615 0.00 0.00 0.00 1.82
383 384 6.779860 TGGCTTCAAGGACTAAGAGTAAAAT 58.220 36.000 0.00 0.00 0.00 1.82
384 385 6.182507 TGGCTTCAAGGACTAAGAGTAAAA 57.817 37.500 0.00 0.00 0.00 1.52
385 386 5.818678 TGGCTTCAAGGACTAAGAGTAAA 57.181 39.130 0.00 0.00 0.00 2.01
386 387 5.483937 TGATGGCTTCAAGGACTAAGAGTAA 59.516 40.000 0.00 0.00 0.00 2.24
387 388 5.023452 TGATGGCTTCAAGGACTAAGAGTA 58.977 41.667 0.00 0.00 0.00 2.59
388 389 3.840666 TGATGGCTTCAAGGACTAAGAGT 59.159 43.478 0.00 0.00 0.00 3.24
389 390 4.187694 GTGATGGCTTCAAGGACTAAGAG 58.812 47.826 4.47 0.00 35.70 2.85
390 391 3.582647 TGTGATGGCTTCAAGGACTAAGA 59.417 43.478 4.47 0.00 35.70 2.10
391 392 3.942829 TGTGATGGCTTCAAGGACTAAG 58.057 45.455 4.47 0.00 35.70 2.18
392 393 4.019411 TGATGTGATGGCTTCAAGGACTAA 60.019 41.667 4.47 0.00 35.70 2.24
393 394 3.519107 TGATGTGATGGCTTCAAGGACTA 59.481 43.478 4.47 0.00 35.70 2.59
394 395 2.306805 TGATGTGATGGCTTCAAGGACT 59.693 45.455 4.47 0.00 35.70 3.85
395 396 2.421424 GTGATGTGATGGCTTCAAGGAC 59.579 50.000 4.47 0.00 35.70 3.85
396 397 2.618816 GGTGATGTGATGGCTTCAAGGA 60.619 50.000 4.47 0.00 35.70 3.36
397 398 1.747355 GGTGATGTGATGGCTTCAAGG 59.253 52.381 4.47 0.00 35.70 3.61
398 399 1.399440 CGGTGATGTGATGGCTTCAAG 59.601 52.381 4.47 0.00 35.70 3.02
399 400 1.003003 TCGGTGATGTGATGGCTTCAA 59.997 47.619 4.47 0.00 35.70 2.69
400 401 0.612744 TCGGTGATGTGATGGCTTCA 59.387 50.000 0.00 0.00 0.00 3.02
401 402 1.398390 GTTCGGTGATGTGATGGCTTC 59.602 52.381 0.00 0.00 0.00 3.86
402 403 1.271325 TGTTCGGTGATGTGATGGCTT 60.271 47.619 0.00 0.00 0.00 4.35
403 404 0.324614 TGTTCGGTGATGTGATGGCT 59.675 50.000 0.00 0.00 0.00 4.75
404 405 0.729116 CTGTTCGGTGATGTGATGGC 59.271 55.000 0.00 0.00 0.00 4.40
405 406 1.066215 TCCTGTTCGGTGATGTGATGG 60.066 52.381 0.00 0.00 0.00 3.51
406 407 2.385013 TCCTGTTCGGTGATGTGATG 57.615 50.000 0.00 0.00 0.00 3.07
407 408 3.417069 TTTCCTGTTCGGTGATGTGAT 57.583 42.857 0.00 0.00 0.00 3.06
408 409 2.920724 TTTCCTGTTCGGTGATGTGA 57.079 45.000 0.00 0.00 0.00 3.58
409 410 2.226437 CCTTTTCCTGTTCGGTGATGTG 59.774 50.000 0.00 0.00 0.00 3.21
410 411 2.158667 ACCTTTTCCTGTTCGGTGATGT 60.159 45.455 0.00 0.00 0.00 3.06
411 412 2.226437 CACCTTTTCCTGTTCGGTGATG 59.774 50.000 0.00 0.00 46.11 3.07
412 413 2.504367 CACCTTTTCCTGTTCGGTGAT 58.496 47.619 0.00 0.00 46.11 3.06
413 414 1.476110 CCACCTTTTCCTGTTCGGTGA 60.476 52.381 8.22 0.00 46.11 4.02
414 415 0.951558 CCACCTTTTCCTGTTCGGTG 59.048 55.000 0.00 0.00 43.58 4.94
415 416 0.841289 TCCACCTTTTCCTGTTCGGT 59.159 50.000 0.00 0.00 0.00 4.69
416 417 1.607148 GTTCCACCTTTTCCTGTTCGG 59.393 52.381 0.00 0.00 0.00 4.30
417 418 2.032924 GTGTTCCACCTTTTCCTGTTCG 59.967 50.000 0.00 0.00 0.00 3.95
418 419 2.032924 CGTGTTCCACCTTTTCCTGTTC 59.967 50.000 0.00 0.00 0.00 3.18
424 425 1.281656 CCGCGTGTTCCACCTTTTC 59.718 57.895 4.92 0.00 0.00 2.29
472 473 3.932710 CCTGCTTGCTTAATTACGACTCA 59.067 43.478 0.00 0.00 0.00 3.41
529 531 1.781555 GCGTGATCACCTGTGTTCG 59.218 57.895 20.03 6.98 33.26 3.95
558 560 4.708601 CGTGTATCTTCCGGAAACAAAAG 58.291 43.478 19.21 6.98 0.00 2.27
562 564 1.717194 GCGTGTATCTTCCGGAAACA 58.283 50.000 19.39 16.79 0.00 2.83
563 565 0.643820 CGCGTGTATCTTCCGGAAAC 59.356 55.000 19.39 14.22 0.00 2.78
587 597 2.484264 AGCGGTAACTGATTTCTTGTGC 59.516 45.455 0.00 0.00 0.00 4.57
600 610 2.815503 GGAGAGATAGGAGAGCGGTAAC 59.184 54.545 0.00 0.00 0.00 2.50
614 624 6.461231 CGATAAGTAAACGAAAGGGGAGAGAT 60.461 42.308 0.00 0.00 0.00 2.75
621 631 2.283351 CGCCGATAAGTAAACGAAAGGG 59.717 50.000 0.00 0.00 0.00 3.95
639 649 3.179939 GCGTTCTCTTCCGTCGCC 61.180 66.667 0.00 0.00 40.83 5.54
712 722 3.047877 CCCGTCGGTTTCCTGCAC 61.048 66.667 11.06 0.00 0.00 4.57
713 723 4.323477 CCCCGTCGGTTTCCTGCA 62.323 66.667 11.06 0.00 0.00 4.41
714 724 1.963464 TATCCCCGTCGGTTTCCTGC 61.963 60.000 11.06 0.00 0.00 4.85
715 725 0.756903 ATATCCCCGTCGGTTTCCTG 59.243 55.000 11.06 0.00 0.00 3.86
745 845 2.927553 TAACTACCGGTTTCTCTCGC 57.072 50.000 15.04 0.00 39.17 5.03
756 856 3.057456 AGAGACACAGTGCTTAACTACCG 60.057 47.826 0.00 0.00 36.83 4.02
768 868 0.175760 AACACGCACAGAGACACAGT 59.824 50.000 0.00 0.00 0.00 3.55
869 973 1.369692 CTTGTGGGTGGCGTACTGA 59.630 57.895 0.00 0.00 0.00 3.41
931 1041 2.282462 CACTGGTCCCAAGGTGGC 60.282 66.667 0.00 0.00 35.79 5.01
941 1051 2.363172 GGAGGGAGAGGCACTGGTC 61.363 68.421 0.00 0.00 41.55 4.02
943 1053 2.040278 AGGAGGGAGAGGCACTGG 59.960 66.667 0.00 0.00 41.55 4.00
960 1070 0.608640 GAAAGGTTGCGAGAGAGGGA 59.391 55.000 0.00 0.00 0.00 4.20
1024 1135 1.183676 AGGTCGAACTAACCTGCGGT 61.184 55.000 0.00 0.00 45.50 5.68
1202 1313 3.983420 CCTCCTTGCCCTTGGGCA 61.983 66.667 27.73 27.73 43.62 5.36
1203 1314 3.651980 CTCCTCCTTGCCCTTGGGC 62.652 68.421 22.91 22.91 0.00 5.36
1204 1315 1.793820 AACTCCTCCTTGCCCTTGGG 61.794 60.000 0.32 0.32 0.00 4.12
1205 1316 0.322906 GAACTCCTCCTTGCCCTTGG 60.323 60.000 0.00 0.00 0.00 3.61
1206 1317 0.695347 AGAACTCCTCCTTGCCCTTG 59.305 55.000 0.00 0.00 0.00 3.61
1207 1318 0.988063 GAGAACTCCTCCTTGCCCTT 59.012 55.000 0.00 0.00 35.87 3.95
1293 1407 1.635663 GGATGACGCCGTCCTTGTTG 61.636 60.000 15.60 0.00 43.62 3.33
1362 1476 1.060937 GATTGATCGGCGTGTGTGC 59.939 57.895 6.85 0.00 0.00 4.57
1376 1490 2.096496 CCAAGCAGGTAGAAAGCGATTG 59.904 50.000 0.00 0.00 0.00 2.67
1393 1507 2.380410 CCGACTTCCGCGTTCCAAG 61.380 63.158 4.92 4.08 36.84 3.61
1473 1587 1.757306 CCTGCAGACCAACTCCACT 59.243 57.895 17.39 0.00 0.00 4.00
1474 1588 1.302832 CCCTGCAGACCAACTCCAC 60.303 63.158 17.39 0.00 0.00 4.02
1477 1591 0.606673 GGAACCCTGCAGACCAACTC 60.607 60.000 17.39 2.61 0.00 3.01
1478 1592 1.456287 GGAACCCTGCAGACCAACT 59.544 57.895 17.39 0.00 0.00 3.16
1537 1656 1.620819 AGCAGTCCGTTGATGAAGACT 59.379 47.619 0.00 0.00 40.15 3.24
1626 1763 4.080751 TCTCAATCATGCACAGAAGGATCA 60.081 41.667 0.00 0.00 0.00 2.92
1631 1768 3.546218 CGCATCTCAATCATGCACAGAAG 60.546 47.826 5.56 0.00 46.01 2.85
1666 1819 2.172483 AACCGCACCTAGGACAGCAG 62.172 60.000 17.98 11.15 0.00 4.24
1673 1826 2.046314 CCCACAACCGCACCTAGG 60.046 66.667 7.41 7.41 0.00 3.02
1690 1843 4.007644 GCAACCCAAGCCTTGCCC 62.008 66.667 0.00 0.00 37.41 5.36
1745 1898 5.107453 TGTTTGCACGGTGTTTTTAAAAGTG 60.107 36.000 10.24 11.10 0.00 3.16
1787 1940 0.391130 TGTGCGTTCATAGGGTGAGC 60.391 55.000 0.00 0.00 38.29 4.26
1789 1942 0.682292 TGTGTGCGTTCATAGGGTGA 59.318 50.000 0.00 0.00 34.25 4.02
1801 1969 4.990426 TCATAAGGATATGATGTGTGTGCG 59.010 41.667 0.00 0.00 42.30 5.34
1816 1994 4.141846 GGTCTCACAAGATGCTCATAAGGA 60.142 45.833 0.00 0.00 33.08 3.36
1819 1997 4.507710 GTGGTCTCACAAGATGCTCATAA 58.492 43.478 0.00 0.00 43.13 1.90
1825 2003 0.037326 TCGGTGGTCTCACAAGATGC 60.037 55.000 0.00 0.00 45.32 3.91
1841 2019 2.549282 CGTTTGTGGCGACTTCGG 59.451 61.111 0.00 0.00 40.23 4.30
1861 2060 0.103026 TGGCATGCTACTCGCTACAG 59.897 55.000 18.92 0.00 40.11 2.74
1876 2076 1.603171 TTCTTTCAGCGGCATGGCA 60.603 52.632 20.37 0.00 34.64 4.92
1929 2130 1.619827 ACTTTGGCATGGGTGATTGTG 59.380 47.619 0.00 0.00 0.00 3.33
1940 2141 7.224297 TGAGTTTAAGTTCTAGACTTTGGCAT 58.776 34.615 11.25 0.00 46.34 4.40
1953 2154 5.552178 ACCTGTCCATCTGAGTTTAAGTTC 58.448 41.667 0.00 0.00 0.00 3.01
1980 2181 1.197036 GGTGACTAAGTTTCTTGCGGC 59.803 52.381 0.00 0.00 0.00 6.53
2040 2241 2.488937 TCGTTCGTGTGCTACTGGAATA 59.511 45.455 0.00 0.00 0.00 1.75
2041 2242 1.271379 TCGTTCGTGTGCTACTGGAAT 59.729 47.619 0.00 0.00 0.00 3.01
2048 2249 4.858692 GGTTAAATACTCGTTCGTGTGCTA 59.141 41.667 9.60 0.00 0.00 3.49
2075 2276 3.504520 ACGGTTCCATGAATTGTGGTAAC 59.495 43.478 0.00 8.69 37.96 2.50
2076 2277 3.757270 ACGGTTCCATGAATTGTGGTAA 58.243 40.909 0.00 0.00 37.96 2.85
2113 2315 4.922103 AGTTTTCCGCACAAAAACGTAAAA 59.078 33.333 10.75 0.00 46.34 1.52
2188 2391 5.416271 AGGCGTTTAGAAGAGGTAAATCA 57.584 39.130 0.00 0.00 0.00 2.57
2221 2424 0.558712 AACCTTACTTGTGGGCCCAA 59.441 50.000 30.64 11.93 0.00 4.12
2275 2478 3.203716 GAAGAAGAGGGTTGACGTGTTT 58.796 45.455 0.00 0.00 0.00 2.83
2403 2606 2.913578 CCAAGTGCAGCCAAGCCA 60.914 61.111 0.00 0.00 0.00 4.75
2404 2607 2.914097 ACCAAGTGCAGCCAAGCC 60.914 61.111 0.00 0.00 0.00 4.35
2405 2608 2.138656 CTCACCAAGTGCAGCCAAGC 62.139 60.000 0.00 0.00 32.98 4.01
2406 2609 1.521450 CCTCACCAAGTGCAGCCAAG 61.521 60.000 0.00 0.00 32.98 3.61
2407 2610 1.529010 CCTCACCAAGTGCAGCCAA 60.529 57.895 0.00 0.00 32.98 4.52
2459 2668 4.662961 CGAGTGCACCGTCTGCCA 62.663 66.667 14.63 0.00 46.51 4.92
2489 2698 1.821332 GAGGCAAGGGCGAAGATGG 60.821 63.158 0.00 0.00 42.47 3.51
2561 2770 3.322466 CCAGGAGGTGGTCGCCTT 61.322 66.667 4.43 0.00 43.42 4.35
2589 2798 0.889186 ACTAACAACTTGGCGGCTGG 60.889 55.000 11.43 5.33 0.00 4.85
2708 2939 4.286320 CTACTAGCTGGCCGCCGG 62.286 72.222 14.51 14.51 40.39 6.13
2772 3003 4.075910 CGTGCGTGCATGCGAAGT 62.076 61.111 25.05 0.00 37.81 3.01
2851 3084 2.431057 GTCGTATCCCTGTCTGGATTGT 59.569 50.000 0.00 0.00 42.62 2.71
3062 3341 2.138596 GTCAGGTTGACCGTTAACGA 57.861 50.000 28.79 6.68 41.37 3.85
3102 3381 5.005490 CGATTTACCTCTTCTAAACGCCTTC 59.995 44.000 0.00 0.00 0.00 3.46
3116 3395 3.078837 TGAAAAGTGCCCGATTTACCTC 58.921 45.455 0.00 0.00 0.00 3.85
3164 3443 7.921214 TGTGCGAAAAACTACCATTTTTATTCA 59.079 29.630 0.00 0.00 40.89 2.57
3204 3483 4.370094 TGGAACCGTACCCAAAAACTAT 57.630 40.909 0.00 0.00 0.00 2.12
3216 3495 6.052405 ACTACCACAATTTATGGAACCGTA 57.948 37.500 11.72 0.00 39.87 4.02
3259 3538 3.728076 TCTAGTTTGTGCTCTGTTCGT 57.272 42.857 0.00 0.00 0.00 3.85
3260 3539 3.369147 CCATCTAGTTTGTGCTCTGTTCG 59.631 47.826 0.00 0.00 0.00 3.95
3261 3540 4.319177 ACCATCTAGTTTGTGCTCTGTTC 58.681 43.478 0.00 0.00 0.00 3.18
3262 3541 4.357918 ACCATCTAGTTTGTGCTCTGTT 57.642 40.909 0.00 0.00 0.00 3.16
3287 3566 1.417890 ACCGCCCTCCATCTAAATCAG 59.582 52.381 0.00 0.00 0.00 2.90
3305 3584 5.526111 TCTCGTGCAGCCTTTTATTTATACC 59.474 40.000 0.00 0.00 0.00 2.73
3317 3596 1.808945 CTTTTGAATCTCGTGCAGCCT 59.191 47.619 0.00 0.00 0.00 4.58
3394 3673 5.121768 CGTTTTAGTAATGCCTGTTGCTAGT 59.878 40.000 0.00 0.00 42.00 2.57
3505 3799 8.635765 AACTAACATGTTCATTGGTCTATGTT 57.364 30.769 15.85 0.00 40.56 2.71
3506 3800 8.268850 GAACTAACATGTTCATTGGTCTATGT 57.731 34.615 15.85 0.00 44.00 2.29
3584 3882 6.362820 GTCTCGTTGTAGTAGAAAGGAAAGTG 59.637 42.308 0.00 0.00 0.00 3.16
3587 3885 6.395426 TGTCTCGTTGTAGTAGAAAGGAAA 57.605 37.500 0.00 0.00 0.00 3.13
3674 3976 3.316308 CCAATCTAAAGCATAGGGTGTGC 59.684 47.826 0.00 0.00 42.81 4.57
3675 3977 4.576463 GTCCAATCTAAAGCATAGGGTGTG 59.424 45.833 0.00 0.00 0.00 3.82
3679 3986 4.437682 TGGTCCAATCTAAAGCATAGGG 57.562 45.455 0.00 0.00 0.00 3.53
3685 3992 4.762251 AGTTCAGTTGGTCCAATCTAAAGC 59.238 41.667 7.77 0.00 0.00 3.51
3697 4006 1.541233 CGCTGGAAGAGTTCAGTTGGT 60.541 52.381 0.00 0.00 34.07 3.67
3712 4021 4.873129 CCGACCGTCCATCGCTGG 62.873 72.222 0.00 0.00 44.64 4.85
3714 4023 4.129737 CACCGACCGTCCATCGCT 62.130 66.667 0.00 0.00 38.27 4.93
3715 4024 2.345880 ATACACCGACCGTCCATCGC 62.346 60.000 0.00 0.00 38.27 4.58
3716 4025 0.317603 GATACACCGACCGTCCATCG 60.318 60.000 0.00 0.00 39.33 3.84
3717 4026 0.742505 TGATACACCGACCGTCCATC 59.257 55.000 0.00 0.00 0.00 3.51
3718 4027 1.410004 ATGATACACCGACCGTCCAT 58.590 50.000 0.00 0.00 0.00 3.41
3719 4028 1.134936 CAATGATACACCGACCGTCCA 60.135 52.381 0.00 0.00 0.00 4.02
3720 4029 1.134907 ACAATGATACACCGACCGTCC 60.135 52.381 0.00 0.00 0.00 4.79
3721 4030 2.288961 ACAATGATACACCGACCGTC 57.711 50.000 0.00 0.00 0.00 4.79
3722 4031 5.475909 AGATATACAATGATACACCGACCGT 59.524 40.000 0.00 0.00 0.00 4.83
3723 4032 5.950883 AGATATACAATGATACACCGACCG 58.049 41.667 0.00 0.00 0.00 4.79
3724 4033 7.159322 AGAGATATACAATGATACACCGACC 57.841 40.000 0.00 0.00 0.00 4.79
3725 4034 9.130312 GAAAGAGATATACAATGATACACCGAC 57.870 37.037 0.00 0.00 0.00 4.79
3726 4035 8.856103 TGAAAGAGATATACAATGATACACCGA 58.144 33.333 0.00 0.00 0.00 4.69
3727 4036 9.645059 ATGAAAGAGATATACAATGATACACCG 57.355 33.333 0.00 0.00 0.00 4.94
3739 4048 8.952278 ACTCGATGGTCTATGAAAGAGATATAC 58.048 37.037 0.00 0.00 33.88 1.47
3773 4082 0.824109 CGGAGGCAGTAGATGGTCAA 59.176 55.000 0.00 0.00 0.00 3.18
3785 4094 1.826720 AGTTAATACCGAACGGAGGCA 59.173 47.619 20.14 2.61 38.96 4.75
3786 4095 2.199236 CAGTTAATACCGAACGGAGGC 58.801 52.381 20.14 4.09 38.96 4.70
3787 4096 3.442100 GACAGTTAATACCGAACGGAGG 58.558 50.000 20.14 0.00 38.96 4.30
3788 4097 3.103738 CGACAGTTAATACCGAACGGAG 58.896 50.000 20.14 0.00 38.96 4.63
3789 4098 2.731968 GCGACAGTTAATACCGAACGGA 60.732 50.000 20.14 4.23 38.96 4.69
3790 4099 1.585214 GCGACAGTTAATACCGAACGG 59.415 52.381 11.83 11.83 42.03 4.44
3791 4100 2.278094 CAGCGACAGTTAATACCGAACG 59.722 50.000 0.00 0.00 31.85 3.95
3792 4101 3.504863 TCAGCGACAGTTAATACCGAAC 58.495 45.455 0.00 0.00 0.00 3.95
3793 4102 3.853831 TCAGCGACAGTTAATACCGAA 57.146 42.857 0.00 0.00 0.00 4.30
3794 4103 3.853831 TTCAGCGACAGTTAATACCGA 57.146 42.857 0.00 0.00 0.00 4.69
3795 4104 4.565166 TCATTTCAGCGACAGTTAATACCG 59.435 41.667 0.00 0.00 0.00 4.02
3796 4105 5.581085 ACTCATTTCAGCGACAGTTAATACC 59.419 40.000 0.00 0.00 0.00 2.73
3797 4106 6.310467 TCACTCATTTCAGCGACAGTTAATAC 59.690 38.462 0.00 0.00 0.00 1.89
3798 4107 6.394809 TCACTCATTTCAGCGACAGTTAATA 58.605 36.000 0.00 0.00 0.00 0.98
3799 4108 5.237815 TCACTCATTTCAGCGACAGTTAAT 58.762 37.500 0.00 0.00 0.00 1.40
3800 4109 4.627058 TCACTCATTTCAGCGACAGTTAA 58.373 39.130 0.00 0.00 0.00 2.01
3801 4110 4.251543 TCACTCATTTCAGCGACAGTTA 57.748 40.909 0.00 0.00 0.00 2.24
3802 4111 3.111853 TCACTCATTTCAGCGACAGTT 57.888 42.857 0.00 0.00 0.00 3.16
3803 4112 2.820059 TCACTCATTTCAGCGACAGT 57.180 45.000 0.00 0.00 0.00 3.55
3804 4113 3.931468 AGATTCACTCATTTCAGCGACAG 59.069 43.478 0.00 0.00 0.00 3.51
3805 4114 3.930336 AGATTCACTCATTTCAGCGACA 58.070 40.909 0.00 0.00 0.00 4.35
3806 4115 5.231147 GTCTAGATTCACTCATTTCAGCGAC 59.769 44.000 0.00 0.00 0.00 5.19
3807 4116 5.344066 GTCTAGATTCACTCATTTCAGCGA 58.656 41.667 0.00 0.00 0.00 4.93
3808 4117 4.205996 CGTCTAGATTCACTCATTTCAGCG 59.794 45.833 0.00 0.00 0.00 5.18
3809 4118 4.026145 GCGTCTAGATTCACTCATTTCAGC 60.026 45.833 0.00 0.00 0.00 4.26
3810 4119 4.205996 CGCGTCTAGATTCACTCATTTCAG 59.794 45.833 0.00 0.00 0.00 3.02
3811 4120 4.105486 CGCGTCTAGATTCACTCATTTCA 58.895 43.478 0.00 0.00 0.00 2.69
3812 4121 3.487574 CCGCGTCTAGATTCACTCATTTC 59.512 47.826 4.92 0.00 0.00 2.17
3813 4122 3.130516 TCCGCGTCTAGATTCACTCATTT 59.869 43.478 4.92 0.00 0.00 2.32
3814 4123 2.688446 TCCGCGTCTAGATTCACTCATT 59.312 45.455 4.92 0.00 0.00 2.57
3815 4124 2.292016 CTCCGCGTCTAGATTCACTCAT 59.708 50.000 4.92 0.00 0.00 2.90
3816 4125 1.671328 CTCCGCGTCTAGATTCACTCA 59.329 52.381 4.92 0.00 0.00 3.41
3817 4126 1.002251 CCTCCGCGTCTAGATTCACTC 60.002 57.143 4.92 0.00 0.00 3.51
3818 4127 1.025812 CCTCCGCGTCTAGATTCACT 58.974 55.000 4.92 0.00 0.00 3.41
3819 4128 0.739561 ACCTCCGCGTCTAGATTCAC 59.260 55.000 4.92 0.00 0.00 3.18
3820 4129 2.336945 TACCTCCGCGTCTAGATTCA 57.663 50.000 4.92 0.00 0.00 2.57
3821 4130 3.919223 ATTACCTCCGCGTCTAGATTC 57.081 47.619 4.92 0.00 0.00 2.52
3822 4131 5.779529 TTTATTACCTCCGCGTCTAGATT 57.220 39.130 4.92 0.00 0.00 2.40
3823 4132 5.779529 TTTTATTACCTCCGCGTCTAGAT 57.220 39.130 4.92 0.00 0.00 1.98
3824 4133 5.581126 TTTTTATTACCTCCGCGTCTAGA 57.419 39.130 4.92 0.00 0.00 2.43
3825 4134 6.839820 AATTTTTATTACCTCCGCGTCTAG 57.160 37.500 4.92 0.00 0.00 2.43
3826 4135 7.224557 GGTTAATTTTTATTACCTCCGCGTCTA 59.775 37.037 4.92 0.00 0.00 2.59
3827 4136 6.037500 GGTTAATTTTTATTACCTCCGCGTCT 59.962 38.462 4.92 0.00 0.00 4.18
3828 4137 6.194463 GGTTAATTTTTATTACCTCCGCGTC 58.806 40.000 4.92 0.00 0.00 5.19
3829 4138 5.066375 GGGTTAATTTTTATTACCTCCGCGT 59.934 40.000 4.92 0.00 0.00 6.01
3830 4139 5.297527 AGGGTTAATTTTTATTACCTCCGCG 59.702 40.000 0.00 0.00 0.00 6.46
3831 4140 6.704289 AGGGTTAATTTTTATTACCTCCGC 57.296 37.500 0.00 0.00 0.00 5.54
3832 4141 6.976349 GCAAGGGTTAATTTTTATTACCTCCG 59.024 38.462 0.00 0.00 0.00 4.63
3833 4142 7.270047 GGCAAGGGTTAATTTTTATTACCTCC 58.730 38.462 0.00 0.00 0.00 4.30
3834 4143 6.976349 CGGCAAGGGTTAATTTTTATTACCTC 59.024 38.462 0.00 0.00 0.00 3.85
3835 4144 6.628621 GCGGCAAGGGTTAATTTTTATTACCT 60.629 38.462 0.00 0.00 0.00 3.08
3836 4145 5.521010 GCGGCAAGGGTTAATTTTTATTACC 59.479 40.000 0.00 0.00 0.00 2.85
3837 4146 6.334989 AGCGGCAAGGGTTAATTTTTATTAC 58.665 36.000 1.45 0.00 0.00 1.89
3838 4147 6.406065 GGAGCGGCAAGGGTTAATTTTTATTA 60.406 38.462 1.45 0.00 0.00 0.98
3839 4148 5.414789 AGCGGCAAGGGTTAATTTTTATT 57.585 34.783 1.45 0.00 0.00 1.40
3840 4149 4.142026 GGAGCGGCAAGGGTTAATTTTTAT 60.142 41.667 1.45 0.00 0.00 1.40
3841 4150 3.193903 GGAGCGGCAAGGGTTAATTTTTA 59.806 43.478 1.45 0.00 0.00 1.52
3842 4151 2.028476 GGAGCGGCAAGGGTTAATTTTT 60.028 45.455 1.45 0.00 0.00 1.94
3877 4186 2.588464 TTATCCGGGAAGGCAAACAA 57.412 45.000 0.00 0.00 40.77 2.83
3894 4205 3.009473 ACTTGCTTCCATCCTCTGCTTTA 59.991 43.478 0.00 0.00 0.00 1.85
3896 4207 1.353694 ACTTGCTTCCATCCTCTGCTT 59.646 47.619 0.00 0.00 0.00 3.91
3910 4221 2.102588 AGATACGCCCGATTTACTTGCT 59.897 45.455 0.00 0.00 0.00 3.91
3912 4223 3.985925 GGTAGATACGCCCGATTTACTTG 59.014 47.826 0.00 0.00 0.00 3.16
3942 4259 2.046507 CTCTGGCAGCGGCTTCTT 60.047 61.111 10.34 0.00 40.87 2.52
3949 4266 4.127040 AGCTCGTCTCTGGCAGCG 62.127 66.667 10.34 8.21 36.95 5.18
3957 4274 0.098025 CTCTGAACCGAGCTCGTCTC 59.902 60.000 32.41 26.36 38.47 3.36
3967 4284 1.399440 TCCGTCGAATACTCTGAACCG 59.601 52.381 0.00 0.00 0.00 4.44
4005 4329 2.355132 TCGAATACTCTGAACCGAGCTC 59.645 50.000 2.73 2.73 34.35 4.09
4007 4331 2.452105 GTCGAATACTCTGAACCGAGC 58.548 52.381 0.00 0.00 34.35 5.03
4008 4332 2.539142 CCGTCGAATACTCTGAACCGAG 60.539 54.545 0.00 0.00 37.07 4.63
4011 4335 2.422832 ACTCCGTCGAATACTCTGAACC 59.577 50.000 0.00 0.00 0.00 3.62
4013 4337 4.331992 CACTACTCCGTCGAATACTCTGAA 59.668 45.833 0.00 0.00 0.00 3.02
4014 4338 3.869832 CACTACTCCGTCGAATACTCTGA 59.130 47.826 0.00 0.00 0.00 3.27
4017 4341 2.286891 GGCACTACTCCGTCGAATACTC 60.287 54.545 0.00 0.00 0.00 2.59
4019 4343 1.596464 CGGCACTACTCCGTCGAATAC 60.596 57.143 0.00 0.00 41.85 1.89
4020 4344 0.659427 CGGCACTACTCCGTCGAATA 59.341 55.000 0.00 0.00 41.85 1.75
4021 4345 1.432251 CGGCACTACTCCGTCGAAT 59.568 57.895 0.00 0.00 41.85 3.34
4022 4346 2.872557 CGGCACTACTCCGTCGAA 59.127 61.111 0.00 0.00 41.85 3.71
4028 4352 3.250521 GTCTAGTCATACGGCACTACTCC 59.749 52.174 0.00 0.00 0.00 3.85
4029 4353 3.250521 GGTCTAGTCATACGGCACTACTC 59.749 52.174 0.00 0.00 0.00 2.59
4030 4354 3.212685 GGTCTAGTCATACGGCACTACT 58.787 50.000 0.00 0.00 0.00 2.57
4031 4355 2.947652 TGGTCTAGTCATACGGCACTAC 59.052 50.000 0.00 0.00 0.00 2.73
4032 4356 2.947652 GTGGTCTAGTCATACGGCACTA 59.052 50.000 0.00 0.00 0.00 2.74
4033 4357 1.749634 GTGGTCTAGTCATACGGCACT 59.250 52.381 0.00 0.00 0.00 4.40
4034 4358 1.202382 GGTGGTCTAGTCATACGGCAC 60.202 57.143 0.00 0.00 0.00 5.01
4035 4359 1.108776 GGTGGTCTAGTCATACGGCA 58.891 55.000 0.00 0.00 0.00 5.69
4036 4360 1.337387 GAGGTGGTCTAGTCATACGGC 59.663 57.143 0.00 0.00 0.00 5.68
4037 4361 2.619177 CAGAGGTGGTCTAGTCATACGG 59.381 54.545 0.00 0.00 32.51 4.02
4038 4362 2.619177 CCAGAGGTGGTCTAGTCATACG 59.381 54.545 0.00 0.00 39.30 3.06
4039 4363 2.362717 GCCAGAGGTGGTCTAGTCATAC 59.637 54.545 0.00 0.00 46.96 2.39
4040 4364 2.667470 GCCAGAGGTGGTCTAGTCATA 58.333 52.381 0.00 0.00 46.96 2.15
4041 4365 1.490574 GCCAGAGGTGGTCTAGTCAT 58.509 55.000 0.00 0.00 46.96 3.06
4049 4373 1.841556 TTTCTCGGCCAGAGGTGGT 60.842 57.895 19.88 0.00 46.96 4.16
4167 4564 1.860484 GCCTGACAGTGCTCCTTTGC 61.860 60.000 0.93 0.00 0.00 3.68
4234 4639 2.094026 GCACTGAACCAATCCCCATTTC 60.094 50.000 0.00 0.00 0.00 2.17
4300 4735 0.176680 ATGTTCTCCTGCAGCGGTAG 59.823 55.000 8.66 2.73 0.00 3.18
4304 4739 0.725686 CTTCATGTTCTCCTGCAGCG 59.274 55.000 8.66 1.56 0.00 5.18
4380 4815 2.202690 TACACGCCCGAATCGCTG 60.203 61.111 0.00 0.00 0.00 5.18
4455 4915 6.011981 TCCACCTAATTAGAAATGGAGGTTGT 60.012 38.462 20.54 3.85 35.08 3.32
4482 5012 5.866207 AGGTCTAACTGTAAACTTTGGAGG 58.134 41.667 0.00 0.00 0.00 4.30
4485 5015 6.760291 AGAGAGGTCTAACTGTAAACTTTGG 58.240 40.000 0.00 0.00 0.00 3.28
4501 5036 6.716934 TTGATACTCCATGTTAGAGAGGTC 57.283 41.667 4.68 2.01 35.27 3.85
4631 5172 8.302965 TCATGAAGTATCTTTGATCGCTATTG 57.697 34.615 0.00 0.00 0.00 1.90
4633 5174 8.363390 TCTTCATGAAGTATCTTTGATCGCTAT 58.637 33.333 29.80 0.00 39.38 2.97
4762 5308 3.331150 TCCACATTACGTTGCAAGTAGG 58.669 45.455 0.00 3.06 0.00 3.18
4763 5309 4.242475 TCTCCACATTACGTTGCAAGTAG 58.758 43.478 0.00 0.00 0.00 2.57
4764 5310 4.021807 TCTCTCCACATTACGTTGCAAGTA 60.022 41.667 0.00 1.84 0.00 2.24
4765 5311 3.067106 CTCTCCACATTACGTTGCAAGT 58.933 45.455 0.00 2.91 0.00 3.16
4766 5312 3.325870 TCTCTCCACATTACGTTGCAAG 58.674 45.455 0.00 0.00 0.00 4.01
4767 5313 3.006430 TCTCTCTCCACATTACGTTGCAA 59.994 43.478 0.00 0.00 0.00 4.08
4773 5319 3.440522 TGTCACTCTCTCTCCACATTACG 59.559 47.826 0.00 0.00 0.00 3.18
4777 5323 5.122707 TCTATGTCACTCTCTCTCCACAT 57.877 43.478 0.00 0.00 0.00 3.21
4863 5761 0.238289 GTTTGACAGTCATGCACCCG 59.762 55.000 3.45 0.00 0.00 5.28
4866 5764 1.001378 GGTGGTTTGACAGTCATGCAC 60.001 52.381 3.45 1.97 0.00 4.57
4929 5827 4.440112 GGGGAAAGAACAAAGACAACACAG 60.440 45.833 0.00 0.00 0.00 3.66
4953 5851 8.142551 TCTTCCTTCAGAGTTTAGTTAGACAAC 58.857 37.037 0.00 0.00 34.67 3.32
4954 5852 8.246430 TCTTCCTTCAGAGTTTAGTTAGACAA 57.754 34.615 0.00 0.00 0.00 3.18
4955 5853 7.724506 TCTCTTCCTTCAGAGTTTAGTTAGACA 59.275 37.037 0.00 0.00 41.18 3.41
4956 5854 8.113173 TCTCTTCCTTCAGAGTTTAGTTAGAC 57.887 38.462 0.00 0.00 41.18 2.59
4958 5856 7.491048 GCATCTCTTCCTTCAGAGTTTAGTTAG 59.509 40.741 0.00 0.00 41.18 2.34
4959 5857 7.324178 GCATCTCTTCCTTCAGAGTTTAGTTA 58.676 38.462 0.00 0.00 41.18 2.24
4960 5858 6.169800 GCATCTCTTCCTTCAGAGTTTAGTT 58.830 40.000 0.00 0.00 41.18 2.24
4961 5859 5.337975 GGCATCTCTTCCTTCAGAGTTTAGT 60.338 44.000 0.00 0.00 41.18 2.24
5058 5956 2.995939 ACGTCATAGCAACACTGTCATG 59.004 45.455 0.00 0.00 0.00 3.07
5060 5958 2.223947 ACACGTCATAGCAACACTGTCA 60.224 45.455 0.00 0.00 0.00 3.58
5097 5995 1.433053 CGGGCGGCACAATTTATCGA 61.433 55.000 12.47 0.00 0.00 3.59
5108 6006 1.615165 TTAGTTACCATCGGGCGGCA 61.615 55.000 12.47 0.00 37.90 5.69
5137 6035 6.486657 TGCTTTAGAGTTGTGTTGCTATCTTT 59.513 34.615 0.00 0.00 0.00 2.52
5360 6710 4.131596 TGGAAACTTACCGTCCTTTCAAG 58.868 43.478 0.00 0.00 32.28 3.02
5728 7100 6.814146 TCCATAAAAGAACAAACAAACACACC 59.186 34.615 0.00 0.00 0.00 4.16
5791 7170 4.344679 TGGAAACATCCTCATTTGCAAACT 59.655 37.500 15.41 0.99 33.81 2.66
5833 7213 5.746721 GTGGAGACATAAAACAAACACCAAC 59.253 40.000 0.00 0.00 46.14 3.77
5905 7305 4.202441 GACAATGGTCATGAGGTAATGCT 58.798 43.478 0.00 0.00 43.73 3.79
5910 7310 4.018506 ACAATGGACAATGGTCATGAGGTA 60.019 41.667 1.86 0.00 46.17 3.08
5951 7354 2.293399 GTCCTCACATTTTTCGCCAACT 59.707 45.455 0.00 0.00 0.00 3.16
5953 7356 1.611491 GGTCCTCACATTTTTCGCCAA 59.389 47.619 0.00 0.00 0.00 4.52
6086 7492 5.220265 GCACCGTATGAAAAATGCAGAAATG 60.220 40.000 0.00 0.00 33.27 2.32
6105 7511 1.673920 AGTAGTTGTTTGGTTGCACCG 59.326 47.619 0.00 0.00 42.58 4.94
6177 7583 9.988815 AGAATAGGATGTCATAACATTGTAGAC 57.011 33.333 8.98 8.98 46.20 2.59
6219 7625 6.681777 CCTCTTTGGTTTGTAGGATTTCAAG 58.318 40.000 0.00 0.00 0.00 3.02
6287 7693 9.528018 CAGTAAAATGTTGTGGTGAAACTAAAT 57.472 29.630 0.00 0.00 36.74 1.40
6304 7710 6.072728 TGCACCAGCTAGTTAACAGTAAAATG 60.073 38.462 8.61 0.12 42.74 2.32
6316 7722 0.883833 GTTGCATGCACCAGCTAGTT 59.116 50.000 22.58 0.00 42.74 2.24
6318 7724 0.883153 TTGTTGCATGCACCAGCTAG 59.117 50.000 22.58 0.00 42.74 3.42
6320 7726 0.037697 CATTGTTGCATGCACCAGCT 60.038 50.000 22.58 8.25 42.74 4.24
6321 7727 0.038067 TCATTGTTGCATGCACCAGC 60.038 50.000 22.58 11.56 42.57 4.85
6322 7728 2.063266 GTTCATTGTTGCATGCACCAG 58.937 47.619 22.58 9.12 0.00 4.00
6323 7729 1.411612 TGTTCATTGTTGCATGCACCA 59.588 42.857 22.58 18.42 0.00 4.17
6324 7730 1.794116 GTGTTCATTGTTGCATGCACC 59.206 47.619 22.58 15.34 0.00 5.01
6325 7731 2.471818 TGTGTTCATTGTTGCATGCAC 58.528 42.857 22.58 16.00 0.00 4.57
6326 7732 2.884894 TGTGTTCATTGTTGCATGCA 57.115 40.000 18.46 18.46 0.00 3.96
6327 7733 3.581755 AGATGTGTTCATTGTTGCATGC 58.418 40.909 11.82 11.82 34.06 4.06
6330 7736 4.261698 CCTCAAGATGTGTTCATTGTTGCA 60.262 41.667 0.00 0.00 34.06 4.08
6331 7737 4.232221 CCTCAAGATGTGTTCATTGTTGC 58.768 43.478 0.00 0.00 34.06 4.17
6332 7738 5.008911 TCACCTCAAGATGTGTTCATTGTTG 59.991 40.000 5.59 0.00 34.06 3.33
6333 7739 5.132502 TCACCTCAAGATGTGTTCATTGTT 58.867 37.500 5.59 0.00 34.06 2.83
6337 7743 4.897509 TCTCACCTCAAGATGTGTTCAT 57.102 40.909 5.59 0.00 36.95 2.57
6338 7744 4.897509 ATCTCACCTCAAGATGTGTTCA 57.102 40.909 5.59 0.00 32.27 3.18
6367 7836 8.796601 ATGTTTCTACATAAGTGCACTAGCAGC 61.797 40.741 22.01 6.46 46.76 5.25
6384 7853 7.095187 CGGAGGGATTATTTGCTATGTTTCTAC 60.095 40.741 0.00 0.00 0.00 2.59
6402 7871 6.494666 TCTTATATTTGTGAACGGAGGGAT 57.505 37.500 0.00 0.00 0.00 3.85
6403 7872 5.943349 TCTTATATTTGTGAACGGAGGGA 57.057 39.130 0.00 0.00 0.00 4.20
6404 7873 8.848474 AATATCTTATATTTGTGAACGGAGGG 57.152 34.615 0.00 0.00 0.00 4.30
6457 7926 6.582636 TGTATTTGTTGACTCACTTCAGTCT 58.417 36.000 2.49 0.00 43.00 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.