Multiple sequence alignment - TraesCS7A01G200600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G200600 chr7A 100.000 6509 0 0 1 6509 162920322 162926830 0.000000e+00 12020
1 TraesCS7A01G200600 chr7A 90.326 1044 99 2 2573 3616 672862956 672861915 0.000000e+00 1367
2 TraesCS7A01G200600 chr7D 93.420 2082 93 29 4412 6482 161842343 161844391 0.000000e+00 3046
3 TraesCS7A01G200600 chr7D 89.137 2550 131 55 87 2547 161838978 161841470 0.000000e+00 3040
4 TraesCS7A01G200600 chr7D 94.040 755 33 4 3613 4359 161841455 161842205 0.000000e+00 1134
5 TraesCS7A01G200600 chr7D 91.209 91 3 5 3 91 627316419 627316506 1.150000e-22 119
6 TraesCS7A01G200600 chr7B 93.425 1673 79 17 4830 6488 123861041 123862696 0.000000e+00 2451
7 TraesCS7A01G200600 chr7B 89.290 1606 112 24 87 1666 123857153 123858724 0.000000e+00 1958
8 TraesCS7A01G200600 chr7B 90.315 888 43 16 1666 2520 123858861 123859738 0.000000e+00 1123
9 TraesCS7A01G200600 chr7B 92.612 758 37 9 3613 4358 123859763 123860513 0.000000e+00 1072
10 TraesCS7A01G200600 chr7B 89.549 421 28 10 4402 4810 123860640 123861056 2.690000e-143 520
11 TraesCS7A01G200600 chr5A 97.901 1048 21 1 2569 3616 558970051 558971097 0.000000e+00 1812
12 TraesCS7A01G200600 chr5A 88.845 1013 105 6 2548 3560 455538822 455539826 0.000000e+00 1238
13 TraesCS7A01G200600 chr5A 93.902 82 1 3 10 90 4610209 4610131 3.190000e-23 121
14 TraesCS7A01G200600 chr2A 96.913 1069 33 0 2548 3616 694814606 694813538 0.000000e+00 1792
15 TraesCS7A01G200600 chr2A 92.771 83 2 3 9 91 48870560 48870638 4.120000e-22 117
16 TraesCS7A01G200600 chr6B 94.362 1082 36 2 2547 3603 120135699 120134618 0.000000e+00 1637
17 TraesCS7A01G200600 chr1A 92.939 1048 72 2 2547 3593 496056442 496055396 0.000000e+00 1524
18 TraesCS7A01G200600 chr1A 91.146 1073 80 5 2547 3616 3611939 3612999 0.000000e+00 1441
19 TraesCS7A01G200600 chr1A 89.262 1071 106 6 2548 3616 552390170 552389107 0.000000e+00 1332
20 TraesCS7A01G200600 chr4A 95.899 634 23 3 2547 3177 4872974 4873607 0.000000e+00 1024
21 TraesCS7A01G200600 chr4A 96.755 493 16 0 3124 3616 4873602 4874094 0.000000e+00 822
22 TraesCS7A01G200600 chr4A 87.255 102 7 2 2 97 114582364 114582263 1.920000e-20 111
23 TraesCS7A01G200600 chr4A 87.629 97 8 4 3 97 539300721 539300627 6.900000e-20 110
24 TraesCS7A01G200600 chr6D 90.110 91 4 4 6 91 134695707 134695797 5.330000e-21 113
25 TraesCS7A01G200600 chr6D 90.909 88 3 1 6 88 392125547 392125460 5.330000e-21 113
26 TraesCS7A01G200600 chr3B 89.362 94 4 2 1 88 125879587 125879680 5.330000e-21 113
27 TraesCS7A01G200600 chr3B 89.362 94 4 2 1 88 125897278 125897371 5.330000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G200600 chr7A 162920322 162926830 6508 False 12020.000000 12020 100.0000 1 6509 1 chr7A.!!$F1 6508
1 TraesCS7A01G200600 chr7A 672861915 672862956 1041 True 1367.000000 1367 90.3260 2573 3616 1 chr7A.!!$R1 1043
2 TraesCS7A01G200600 chr7D 161838978 161844391 5413 False 2406.666667 3046 92.1990 87 6482 3 chr7D.!!$F2 6395
3 TraesCS7A01G200600 chr7B 123857153 123862696 5543 False 1424.800000 2451 91.0382 87 6488 5 chr7B.!!$F1 6401
4 TraesCS7A01G200600 chr5A 558970051 558971097 1046 False 1812.000000 1812 97.9010 2569 3616 1 chr5A.!!$F2 1047
5 TraesCS7A01G200600 chr5A 455538822 455539826 1004 False 1238.000000 1238 88.8450 2548 3560 1 chr5A.!!$F1 1012
6 TraesCS7A01G200600 chr2A 694813538 694814606 1068 True 1792.000000 1792 96.9130 2548 3616 1 chr2A.!!$R1 1068
7 TraesCS7A01G200600 chr6B 120134618 120135699 1081 True 1637.000000 1637 94.3620 2547 3603 1 chr6B.!!$R1 1056
8 TraesCS7A01G200600 chr1A 496055396 496056442 1046 True 1524.000000 1524 92.9390 2547 3593 1 chr1A.!!$R1 1046
9 TraesCS7A01G200600 chr1A 3611939 3612999 1060 False 1441.000000 1441 91.1460 2547 3616 1 chr1A.!!$F1 1069
10 TraesCS7A01G200600 chr1A 552389107 552390170 1063 True 1332.000000 1332 89.2620 2548 3616 1 chr1A.!!$R2 1068
11 TraesCS7A01G200600 chr4A 4872974 4874094 1120 False 923.000000 1024 96.3270 2547 3616 2 chr4A.!!$F1 1069

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
510 514 0.038166 GGAGTTTCATGTGGGAGCCA 59.962 55.0 0.00 0.0 0.00 4.75 F
1598 1650 0.039911 AGTACTCAACTCCTCGCCCT 59.960 55.0 0.00 0.0 30.33 5.19 F
2364 2618 0.243636 GGTGGAAAATTGACGCAGGG 59.756 55.0 0.00 0.0 0.00 4.45 F
3616 3963 0.108424 GCCAGAGTGGACTGTAGCTG 60.108 60.0 0.00 0.0 40.96 4.24 F
4157 4512 0.179073 GCAGGGCGTGACAGTGATAT 60.179 55.0 12.03 0.0 0.00 1.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1702 1892 0.874390 TAGTAACTGTTCCGTCGCGT 59.126 50.0 5.77 0.00 0.00 6.01 R
2963 3235 0.882484 TGCGCGACAAGGTTGATGAA 60.882 50.0 12.10 0.00 0.00 2.57 R
4050 4397 0.727398 GTACCTCTTTGCATGCGACC 59.273 55.0 14.09 0.00 0.00 4.79 R
4439 4909 0.108963 TACCGGGGGTTTGTCTGTTG 59.891 55.0 6.32 0.00 37.09 3.33 R
6065 6555 0.108945 ACTAACTTGAGGCGGCGTAC 60.109 55.0 9.37 1.56 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.476628 TTACAAAATACTCCCTCCGTCC 57.523 45.455 0.00 0.00 0.00 4.79
23 24 1.558294 ACAAAATACTCCCTCCGTCCC 59.442 52.381 0.00 0.00 0.00 4.46
24 25 1.557832 CAAAATACTCCCTCCGTCCCA 59.442 52.381 0.00 0.00 0.00 4.37
25 26 2.172717 CAAAATACTCCCTCCGTCCCAT 59.827 50.000 0.00 0.00 0.00 4.00
26 27 3.339713 AAATACTCCCTCCGTCCCATA 57.660 47.619 0.00 0.00 0.00 2.74
27 28 3.339713 AATACTCCCTCCGTCCCATAA 57.660 47.619 0.00 0.00 0.00 1.90
28 29 3.562108 ATACTCCCTCCGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
29 30 4.687262 ATACTCCCTCCGTCCCATAATA 57.313 45.455 0.00 0.00 0.00 0.98
30 31 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
31 32 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
32 33 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
33 34 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
34 35 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
35 36 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
36 37 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
37 38 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
38 39 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
39 40 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
40 41 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
41 42 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
42 43 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
43 44 7.069569 CGTCCCATAATATAAGAGCGTTTTTG 58.930 38.462 0.00 0.00 0.00 2.44
44 45 7.360361 GTCCCATAATATAAGAGCGTTTTTGG 58.640 38.462 0.00 0.00 0.00 3.28
45 46 6.016610 TCCCATAATATAAGAGCGTTTTTGGC 60.017 38.462 0.00 0.00 0.00 4.52
46 47 6.238897 CCCATAATATAAGAGCGTTTTTGGCA 60.239 38.462 0.00 0.00 0.00 4.92
47 48 6.636850 CCATAATATAAGAGCGTTTTTGGCAC 59.363 38.462 0.00 0.00 0.00 5.01
48 49 5.897377 AATATAAGAGCGTTTTTGGCACT 57.103 34.783 0.00 0.00 32.60 4.40
49 50 6.995511 AATATAAGAGCGTTTTTGGCACTA 57.004 33.333 0.00 0.00 31.01 2.74
50 51 4.680171 ATAAGAGCGTTTTTGGCACTAC 57.320 40.909 0.00 0.00 31.01 2.73
51 52 1.961793 AGAGCGTTTTTGGCACTACA 58.038 45.000 0.00 0.00 29.39 2.74
52 53 1.602377 AGAGCGTTTTTGGCACTACAC 59.398 47.619 0.00 0.00 29.39 2.90
53 54 1.602377 GAGCGTTTTTGGCACTACACT 59.398 47.619 0.00 0.00 0.00 3.55
54 55 2.803956 GAGCGTTTTTGGCACTACACTA 59.196 45.455 0.00 0.00 0.00 2.74
55 56 3.207778 AGCGTTTTTGGCACTACACTAA 58.792 40.909 0.00 0.00 0.00 2.24
56 57 3.628487 AGCGTTTTTGGCACTACACTAAA 59.372 39.130 0.00 0.00 0.00 1.85
57 58 4.096682 AGCGTTTTTGGCACTACACTAAAA 59.903 37.500 0.00 0.00 0.00 1.52
58 59 4.205588 GCGTTTTTGGCACTACACTAAAAC 59.794 41.667 10.06 10.06 38.23 2.43
59 60 4.736307 CGTTTTTGGCACTACACTAAAACC 59.264 41.667 13.02 0.00 38.30 3.27
60 61 4.555348 TTTTGGCACTACACTAAAACCG 57.445 40.909 0.00 0.00 0.00 4.44
61 62 1.515081 TGGCACTACACTAAAACCGC 58.485 50.000 0.00 0.00 0.00 5.68
62 63 1.071071 TGGCACTACACTAAAACCGCT 59.929 47.619 0.00 0.00 0.00 5.52
63 64 1.730612 GGCACTACACTAAAACCGCTC 59.269 52.381 0.00 0.00 0.00 5.03
64 65 2.612221 GGCACTACACTAAAACCGCTCT 60.612 50.000 0.00 0.00 0.00 4.09
65 66 3.064931 GCACTACACTAAAACCGCTCTT 58.935 45.455 0.00 0.00 0.00 2.85
66 67 4.240096 GCACTACACTAAAACCGCTCTTA 58.760 43.478 0.00 0.00 0.00 2.10
67 68 4.868734 GCACTACACTAAAACCGCTCTTAT 59.131 41.667 0.00 0.00 0.00 1.73
68 69 6.038356 GCACTACACTAAAACCGCTCTTATA 58.962 40.000 0.00 0.00 0.00 0.98
69 70 6.700520 GCACTACACTAAAACCGCTCTTATAT 59.299 38.462 0.00 0.00 0.00 0.86
70 71 7.224167 GCACTACACTAAAACCGCTCTTATATT 59.776 37.037 0.00 0.00 0.00 1.28
71 72 9.740239 CACTACACTAAAACCGCTCTTATATTA 57.260 33.333 0.00 0.00 0.00 0.98
74 75 8.603242 ACACTAAAACCGCTCTTATATTATGG 57.397 34.615 0.00 0.00 0.00 2.74
75 76 7.660208 ACACTAAAACCGCTCTTATATTATGGG 59.340 37.037 0.00 0.00 0.00 4.00
76 77 7.876068 CACTAAAACCGCTCTTATATTATGGGA 59.124 37.037 0.00 0.00 0.00 4.37
77 78 7.876582 ACTAAAACCGCTCTTATATTATGGGAC 59.123 37.037 0.00 0.00 0.00 4.46
78 79 4.451629 ACCGCTCTTATATTATGGGACG 57.548 45.455 0.00 0.00 0.00 4.79
79 80 3.194968 ACCGCTCTTATATTATGGGACGG 59.805 47.826 0.00 0.00 42.42 4.79
80 81 3.446161 CCGCTCTTATATTATGGGACGGA 59.554 47.826 0.00 0.00 39.22 4.69
81 82 4.440250 CCGCTCTTATATTATGGGACGGAG 60.440 50.000 0.00 0.00 39.22 4.63
82 83 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
83 84 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
84 85 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
85 86 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
120 121 7.763071 AGTCTAAAAATGGTTAGGTGATACGAC 59.237 37.037 0.00 0.00 32.81 4.34
121 122 5.789710 AAAAATGGTTAGGTGATACGACG 57.210 39.130 0.00 0.00 0.00 5.12
122 123 4.724074 AAATGGTTAGGTGATACGACGA 57.276 40.909 0.00 0.00 0.00 4.20
128 129 4.436584 GGTTAGGTGATACGACGATATCCG 60.437 50.000 0.00 0.00 45.44 4.18
133 134 3.361053 GTGATACGACGATATCCGCTTTG 59.639 47.826 0.00 0.00 43.32 2.77
157 158 9.874205 TTGAAATGAGGAAGCCAATTAAATTAG 57.126 29.630 0.00 0.00 0.00 1.73
183 184 3.242543 GCGCATCAATCTACTTCCAACTG 60.243 47.826 0.30 0.00 0.00 3.16
198 199 6.152661 ACTTCCAACTGAAATGAACACTTTCA 59.847 34.615 0.00 0.00 45.93 2.69
202 203 6.813152 CCAACTGAAATGAACACTTTCAAACT 59.187 34.615 0.00 0.00 45.01 2.66
231 232 3.366679 CCACAAAAGAATCATGAAGCGCT 60.367 43.478 2.64 2.64 0.00 5.92
243 244 2.530177 TGAAGCGCTCGATACAAAGAG 58.470 47.619 12.06 0.00 37.54 2.85
254 255 3.685550 CGATACAAAGAGCCAGGGGAAAT 60.686 47.826 0.00 0.00 0.00 2.17
291 292 8.137437 CGGAATCAATAGAGGTGCAAAATTTAT 58.863 33.333 0.00 0.00 0.00 1.40
334 337 8.511604 ACCGAAATGTCATAAATTTCAGAGAT 57.488 30.769 0.00 0.00 41.90 2.75
355 358 0.901827 GCCCGGGACATTTCCAAATT 59.098 50.000 29.31 0.00 44.98 1.82
401 404 1.213182 TCACTCCGAGATGCCTAGTCT 59.787 52.381 1.33 0.00 0.00 3.24
415 418 3.873952 GCCTAGTCTATGCTTTGGAACAG 59.126 47.826 0.25 0.00 42.39 3.16
446 449 0.935898 ACTATGAGGCGACGAGTACG 59.064 55.000 0.00 0.00 45.75 3.67
467 470 2.029828 GTGTCCACCACTAGTCACTCTG 60.030 54.545 0.00 0.00 41.11 3.35
480 483 2.484264 GTCACTCTGGGGAATTGAAACG 59.516 50.000 0.00 0.00 0.00 3.60
484 487 1.702957 TCTGGGGAATTGAAACGGTCT 59.297 47.619 0.00 0.00 0.00 3.85
494 497 3.887621 TGAAACGGTCTTCATAGGGAG 57.112 47.619 0.00 0.00 30.31 4.30
507 510 3.455910 TCATAGGGAGTTTCATGTGGGAG 59.544 47.826 0.00 0.00 0.00 4.30
510 514 0.038166 GGAGTTTCATGTGGGAGCCA 59.962 55.000 0.00 0.00 0.00 4.75
525 529 1.004440 GCCAGGTCTCTGTCACCAC 60.004 63.158 0.00 0.00 39.31 4.16
619 623 3.399181 ATCGAGGAGGGGCGCAAA 61.399 61.111 10.83 0.00 0.00 3.68
620 624 3.682292 ATCGAGGAGGGGCGCAAAC 62.682 63.158 10.83 0.00 0.00 2.93
621 625 4.394712 CGAGGAGGGGCGCAAACT 62.395 66.667 10.83 3.03 0.00 2.66
622 626 2.987125 GAGGAGGGGCGCAAACTA 59.013 61.111 10.83 0.00 0.00 2.24
623 627 1.153349 GAGGAGGGGCGCAAACTAG 60.153 63.158 10.83 0.00 0.00 2.57
624 628 1.900545 GAGGAGGGGCGCAAACTAGT 61.901 60.000 10.83 0.00 0.00 2.57
625 629 1.449778 GGAGGGGCGCAAACTAGTC 60.450 63.158 10.83 0.00 0.00 2.59
626 630 1.449778 GAGGGGCGCAAACTAGTCC 60.450 63.158 10.83 0.00 0.00 3.85
627 631 2.437895 GGGGCGCAAACTAGTCCC 60.438 66.667 10.83 7.88 36.25 4.46
628 632 2.437895 GGGCGCAAACTAGTCCCC 60.438 66.667 10.83 3.22 0.00 4.81
629 633 2.349755 GGCGCAAACTAGTCCCCA 59.650 61.111 10.83 0.00 0.00 4.96
630 634 1.302993 GGCGCAAACTAGTCCCCAA 60.303 57.895 10.83 0.00 0.00 4.12
631 635 1.305930 GGCGCAAACTAGTCCCCAAG 61.306 60.000 10.83 0.00 0.00 3.61
632 636 0.321298 GCGCAAACTAGTCCCCAAGA 60.321 55.000 0.30 0.00 0.00 3.02
633 637 1.880646 GCGCAAACTAGTCCCCAAGAA 60.881 52.381 0.30 0.00 0.00 2.52
634 638 2.500229 CGCAAACTAGTCCCCAAGAAA 58.500 47.619 0.00 0.00 0.00 2.52
635 639 3.081804 CGCAAACTAGTCCCCAAGAAAT 58.918 45.455 0.00 0.00 0.00 2.17
636 640 4.258543 CGCAAACTAGTCCCCAAGAAATA 58.741 43.478 0.00 0.00 0.00 1.40
637 641 4.698304 CGCAAACTAGTCCCCAAGAAATAA 59.302 41.667 0.00 0.00 0.00 1.40
638 642 5.357032 CGCAAACTAGTCCCCAAGAAATAAT 59.643 40.000 0.00 0.00 0.00 1.28
646 650 9.793259 CTAGTCCCCAAGAAATAATAATAAGCA 57.207 33.333 0.00 0.00 0.00 3.91
667 671 7.054491 AGCAAGTAAAAGGTGTTCAATTCAT 57.946 32.000 0.00 0.00 0.00 2.57
668 672 7.500141 AGCAAGTAAAAGGTGTTCAATTCATT 58.500 30.769 0.00 0.00 0.00 2.57
669 673 7.653311 AGCAAGTAAAAGGTGTTCAATTCATTC 59.347 33.333 0.00 0.00 0.00 2.67
670 674 7.437862 GCAAGTAAAAGGTGTTCAATTCATTCA 59.562 33.333 0.00 0.00 0.00 2.57
671 675 9.311916 CAAGTAAAAGGTGTTCAATTCATTCAA 57.688 29.630 0.00 0.00 0.00 2.69
672 676 9.533253 AAGTAAAAGGTGTTCAATTCATTCAAG 57.467 29.630 0.00 0.00 0.00 3.02
673 677 8.912988 AGTAAAAGGTGTTCAATTCATTCAAGA 58.087 29.630 0.00 0.00 0.00 3.02
674 678 9.528018 GTAAAAGGTGTTCAATTCATTCAAGAA 57.472 29.630 0.00 0.00 0.00 2.52
675 679 8.652810 AAAAGGTGTTCAATTCATTCAAGAAG 57.347 30.769 0.00 0.00 0.00 2.85
680 684 8.302438 GGTGTTCAATTCATTCAAGAAGAAGAT 58.698 33.333 0.00 0.00 40.15 2.40
701 705 2.360801 TGCCAAAGAAAAAGGGAACGAG 59.639 45.455 0.00 0.00 0.00 4.18
787 792 8.783093 CCTCCTCTCTCTTTATATATATCTGCG 58.217 40.741 0.00 0.00 0.00 5.18
851 870 4.521062 ATCGCAGTCTCTGGCCGC 62.521 66.667 0.00 0.00 31.21 6.53
895 914 1.630148 CGAGAGACGGACAATTGGAC 58.370 55.000 10.83 3.43 38.46 4.02
896 915 1.067846 CGAGAGACGGACAATTGGACA 60.068 52.381 10.83 0.00 38.46 4.02
897 916 2.417379 CGAGAGACGGACAATTGGACAT 60.417 50.000 10.83 0.00 38.46 3.06
901 920 3.717707 AGACGGACAATTGGACATATCG 58.282 45.455 10.83 5.30 0.00 2.92
928 947 2.222027 CTTGACGCCTTGAGAAACCTT 58.778 47.619 0.00 0.00 0.00 3.50
932 951 0.512952 CGCCTTGAGAAACCTTCGTG 59.487 55.000 0.00 0.00 34.02 4.35
941 960 4.020218 TGAGAAACCTTCGTGGATTGATCT 60.020 41.667 4.38 0.00 39.71 2.75
952 971 4.439153 CGTGGATTGATCTGGTCCATTTTG 60.439 45.833 14.48 5.32 43.38 2.44
975 994 4.876652 GCACCTAGCAAGCAAAGC 57.123 55.556 0.00 0.00 44.79 3.51
976 995 1.959085 GCACCTAGCAAGCAAAGCA 59.041 52.632 0.00 0.00 44.79 3.91
979 998 2.223433 GCACCTAGCAAGCAAAGCATAG 60.223 50.000 0.00 0.00 44.79 2.23
993 1012 1.009829 GCATAGGCTGGTTCGTTGAG 58.990 55.000 0.00 0.00 36.96 3.02
1140 1159 2.960170 CTGAAGCACTGCAAGGCC 59.040 61.111 3.30 0.00 39.30 5.19
1365 1390 5.364157 TGAGAGGCCCTCTAATTTTCTACTC 59.636 44.000 14.70 0.00 41.35 2.59
1381 1406 4.610333 TCTACTCATGCCTTAGAGTTGGA 58.390 43.478 0.02 0.00 42.12 3.53
1389 1414 3.100671 GCCTTAGAGTTGGAGGAGAAGA 58.899 50.000 0.00 0.00 32.11 2.87
1452 1481 4.991056 TGAGCTGTGTTCAACTGTTAGATC 59.009 41.667 0.00 0.00 0.00 2.75
1458 1487 8.759641 GCTGTGTTCAACTGTTAGATCTATATG 58.240 37.037 2.58 0.00 0.00 1.78
1578 1630 4.856801 CCCTCGCAATCCCACCCG 62.857 72.222 0.00 0.00 0.00 5.28
1597 1649 2.581074 AGTACTCAACTCCTCGCCC 58.419 57.895 0.00 0.00 30.33 6.13
1598 1650 0.039911 AGTACTCAACTCCTCGCCCT 59.960 55.000 0.00 0.00 30.33 5.19
1614 1667 1.067846 GCCCTGGTCAAATTTTCCGAC 60.068 52.381 0.00 0.00 0.00 4.79
1620 1673 4.048241 GGTCAAATTTTCCGACCAAACA 57.952 40.909 17.19 0.00 46.98 2.83
1702 1892 4.389374 CTGGAGTTCTTGACTAAGCCAAA 58.611 43.478 0.00 0.00 39.19 3.28
1703 1893 4.134563 TGGAGTTCTTGACTAAGCCAAAC 58.865 43.478 0.00 0.00 39.19 2.93
1704 1894 3.186613 GGAGTTCTTGACTAAGCCAAACG 59.813 47.826 0.00 0.00 39.19 3.60
1708 1898 0.863144 TTGACTAAGCCAAACGCGAC 59.137 50.000 15.93 0.00 44.76 5.19
1718 1908 0.854062 CAAACGCGACGGAACAGTTA 59.146 50.000 15.93 0.00 0.00 2.24
1730 1920 6.145048 CGACGGAACAGTTACTACAAAAGAAT 59.855 38.462 0.00 0.00 0.00 2.40
2073 2322 1.289982 ATCTCCCTCCTCGACCTCCA 61.290 60.000 0.00 0.00 0.00 3.86
2244 2498 2.724349 GAATCATGCAATTGACGAGGC 58.276 47.619 10.34 0.00 0.00 4.70
2364 2618 0.243636 GGTGGAAAATTGACGCAGGG 59.756 55.000 0.00 0.00 0.00 4.45
2451 2708 1.210478 ACCCTGATCATTTCACCCTCG 59.790 52.381 0.00 0.00 0.00 4.63
2509 2772 2.420722 GTCAGTCAGGACTTAGGACTCG 59.579 54.545 0.00 0.00 39.75 4.18
2514 2777 1.001282 AGGACTTAGGACTCGGGACT 58.999 55.000 0.00 0.00 0.00 3.85
2517 2780 2.018515 GACTTAGGACTCGGGACTCAG 58.981 57.143 0.00 0.00 0.00 3.35
2521 2790 0.336737 AGGACTCGGGACTCAGGATT 59.663 55.000 0.00 0.00 0.00 3.01
2528 2797 4.469945 ACTCGGGACTCAGGATTCAAATTA 59.530 41.667 0.00 0.00 0.00 1.40
2540 2809 7.660617 TCAGGATTCAAATTATCAGCTGATCTC 59.339 37.037 31.92 15.36 36.05 2.75
2683 2953 0.322277 CTCACAGAGCATGCAACCCT 60.322 55.000 21.98 8.24 0.00 4.34
2694 2964 3.351740 CATGCAACCCTATAACCACACA 58.648 45.455 0.00 0.00 0.00 3.72
3340 3687 2.893398 GACCTCGACGATGGCCTT 59.107 61.111 3.32 0.00 0.00 4.35
3436 3783 2.776913 CGAAGAGCTCCGTCCCCTC 61.777 68.421 10.93 0.00 0.00 4.30
3616 3963 0.108424 GCCAGAGTGGACTGTAGCTG 60.108 60.000 0.00 0.00 40.96 4.24
3617 3964 1.550327 CCAGAGTGGACTGTAGCTGA 58.450 55.000 0.00 0.00 40.96 4.26
3618 3965 2.106566 CCAGAGTGGACTGTAGCTGAT 58.893 52.381 0.00 0.00 40.96 2.90
3619 3966 2.100584 CCAGAGTGGACTGTAGCTGATC 59.899 54.545 0.00 0.00 40.96 2.92
3620 3967 3.023119 CAGAGTGGACTGTAGCTGATCT 58.977 50.000 0.00 0.00 33.73 2.75
3621 3968 3.066621 CAGAGTGGACTGTAGCTGATCTC 59.933 52.174 0.00 0.00 33.73 2.75
3622 3969 2.360801 GAGTGGACTGTAGCTGATCTCC 59.639 54.545 0.00 0.00 0.00 3.71
3623 3970 2.103373 GTGGACTGTAGCTGATCTCCA 58.897 52.381 0.00 0.00 0.00 3.86
3624 3971 2.103373 TGGACTGTAGCTGATCTCCAC 58.897 52.381 0.00 0.00 0.00 4.02
3625 3972 2.103373 GGACTGTAGCTGATCTCCACA 58.897 52.381 0.00 0.00 0.00 4.17
3626 3973 2.159170 GGACTGTAGCTGATCTCCACAC 60.159 54.545 0.00 0.00 0.00 3.82
3627 3974 2.757868 GACTGTAGCTGATCTCCACACT 59.242 50.000 0.00 0.00 0.00 3.55
3628 3975 2.495270 ACTGTAGCTGATCTCCACACTG 59.505 50.000 0.00 0.00 0.00 3.66
3657 4004 2.492088 GCATGAAAACTAACCCCACTCC 59.508 50.000 0.00 0.00 0.00 3.85
3658 4005 2.963599 TGAAAACTAACCCCACTCCC 57.036 50.000 0.00 0.00 0.00 4.30
3659 4006 2.136863 TGAAAACTAACCCCACTCCCA 58.863 47.619 0.00 0.00 0.00 4.37
3660 4007 2.158579 TGAAAACTAACCCCACTCCCAC 60.159 50.000 0.00 0.00 0.00 4.61
3687 4034 4.256140 GAATCTGTGAGCAGTTTCATCG 57.744 45.455 11.36 0.00 44.63 3.84
3691 4038 2.922387 CTGTGAGCAGTTTCATCGAGAG 59.078 50.000 0.00 0.00 37.92 3.20
3725 4072 2.264794 GTCGTCGGGGTGAGCATT 59.735 61.111 0.00 0.00 0.00 3.56
3855 4202 1.379916 CCCATGCCTCCTTCACACA 59.620 57.895 0.00 0.00 0.00 3.72
3931 4278 6.256053 ACCATCCCAAACTGAAACTATGATT 58.744 36.000 0.00 0.00 0.00 2.57
3940 4287 7.617041 AACTGAAACTATGATTACCTCAAGC 57.383 36.000 0.00 0.00 37.44 4.01
3969 4316 7.994425 TGTGCTTAAAAGAACTCCATGATTA 57.006 32.000 0.00 0.00 35.49 1.75
3978 4325 5.366460 AGAACTCCATGATTATGACTGCAG 58.634 41.667 13.48 13.48 36.36 4.41
4050 4397 4.223923 AGGGTTGAAGGAATGACTAGTCAG 59.776 45.833 28.29 0.00 43.61 3.51
4076 4431 4.676986 CGCATGCAAAGAGGTACACTACTA 60.677 45.833 19.57 0.00 0.00 1.82
4115 4470 1.462283 CAACAGTCATGAAGCAGGTCG 59.538 52.381 0.00 0.00 0.00 4.79
4144 4499 0.822164 ATTTTCAGCTGATGCAGGGC 59.178 50.000 19.04 0.00 42.74 5.19
4150 4505 2.046988 CTGATGCAGGGCGTGACA 60.047 61.111 12.03 8.92 0.00 3.58
4157 4512 0.179073 GCAGGGCGTGACAGTGATAT 60.179 55.000 12.03 0.00 0.00 1.63
4300 4655 2.124942 GGCTTGGGCTTCCTCTCG 60.125 66.667 0.00 0.00 38.73 4.04
4345 4705 7.455058 TGAGATGTAAGACCTCTATCTACTCC 58.545 42.308 0.00 0.00 0.00 3.85
4375 4755 5.452078 TTTTTGGTCTAGCAGTTTCATGG 57.548 39.130 0.00 0.00 0.00 3.66
4383 4763 6.317857 GTCTAGCAGTTTCATGGAAAATCAC 58.682 40.000 0.00 0.00 33.14 3.06
4386 4766 4.021719 AGCAGTTTCATGGAAAATCACCAG 60.022 41.667 0.00 0.00 40.89 4.00
4395 4775 3.909995 TGGAAAATCACCAGAGGAGAGAA 59.090 43.478 0.00 0.00 33.22 2.87
4402 4782 3.054287 TCACCAGAGGAGAGAACGTCTAT 60.054 47.826 0.00 0.00 34.71 1.98
4403 4783 3.066064 CACCAGAGGAGAGAACGTCTATG 59.934 52.174 0.00 0.00 34.71 2.23
4405 4785 3.066064 CCAGAGGAGAGAACGTCTATGTG 59.934 52.174 0.00 0.00 34.71 3.21
4406 4786 2.685897 AGAGGAGAGAACGTCTATGTGC 59.314 50.000 0.00 0.00 34.71 4.57
4407 4787 2.423892 GAGGAGAGAACGTCTATGTGCA 59.576 50.000 0.00 0.00 34.71 4.57
4408 4788 2.425312 AGGAGAGAACGTCTATGTGCAG 59.575 50.000 0.00 0.00 34.71 4.41
4409 4789 2.189342 GAGAGAACGTCTATGTGCAGC 58.811 52.381 0.00 0.00 34.71 5.25
4410 4790 1.821753 AGAGAACGTCTATGTGCAGCT 59.178 47.619 0.00 0.00 31.71 4.24
4434 4904 8.450964 GCTAAAAATGCTTAACTATGTCACTGA 58.549 33.333 0.00 0.00 0.00 3.41
4438 4908 8.430801 AAATGCTTAACTATGTCACTGATCTC 57.569 34.615 0.00 0.00 0.00 2.75
4439 4909 5.907207 TGCTTAACTATGTCACTGATCTCC 58.093 41.667 0.00 0.00 0.00 3.71
4452 4923 3.077359 CTGATCTCCAACAGACAAACCC 58.923 50.000 0.00 0.00 36.38 4.11
4455 4926 0.889186 CTCCAACAGACAAACCCCCG 60.889 60.000 0.00 0.00 0.00 5.73
4500 4971 1.002430 GACTTCCAGCACCACAGATCA 59.998 52.381 0.00 0.00 0.00 2.92
4639 5117 2.899900 AGAAACCATTCCCCTTTGCTTC 59.100 45.455 0.00 0.00 36.12 3.86
4651 5129 2.036217 CCTTTGCTTCAAACCATCTGCA 59.964 45.455 0.00 0.00 0.00 4.41
4737 5215 2.625314 CGGGATGAGACTGCATCTAGAA 59.375 50.000 0.00 0.00 43.25 2.10
4757 5235 3.857157 AGGCAAGAAGAACAACAGGTA 57.143 42.857 0.00 0.00 0.00 3.08
4758 5236 3.744660 AGGCAAGAAGAACAACAGGTAG 58.255 45.455 0.00 0.00 0.00 3.18
4759 5237 2.226674 GGCAAGAAGAACAACAGGTAGC 59.773 50.000 0.00 0.00 0.00 3.58
4760 5238 3.142174 GCAAGAAGAACAACAGGTAGCT 58.858 45.455 0.00 0.00 0.00 3.32
4761 5239 3.058639 GCAAGAAGAACAACAGGTAGCTG 60.059 47.826 20.16 20.16 0.00 4.24
4762 5240 4.130118 CAAGAAGAACAACAGGTAGCTGT 58.870 43.478 21.62 21.62 39.56 4.40
4763 5241 3.733337 AGAAGAACAACAGGTAGCTGTG 58.267 45.455 27.15 21.38 37.66 3.66
4764 5242 1.884235 AGAACAACAGGTAGCTGTGC 58.116 50.000 27.15 16.44 37.66 4.57
4765 5243 1.417890 AGAACAACAGGTAGCTGTGCT 59.582 47.619 27.15 18.18 43.41 4.40
4766 5244 2.632996 AGAACAACAGGTAGCTGTGCTA 59.367 45.455 27.15 0.00 40.44 3.49
4768 5246 3.252974 ACAACAGGTAGCTGTGCTATC 57.747 47.619 27.15 2.20 43.30 2.08
4799 5278 5.613358 GCTGTAGCAGTATGTTCAGTTTT 57.387 39.130 0.00 0.00 41.59 2.43
4805 5284 8.364894 TGTAGCAGTATGTTCAGTTTTCTTCTA 58.635 33.333 0.00 0.00 39.31 2.10
4809 5288 7.965107 GCAGTATGTTCAGTTTTCTTCTATTGG 59.035 37.037 0.00 0.00 39.31 3.16
4811 5290 9.220767 AGTATGTTCAGTTTTCTTCTATTGGTC 57.779 33.333 0.00 0.00 0.00 4.02
4812 5291 6.877611 TGTTCAGTTTTCTTCTATTGGTCC 57.122 37.500 0.00 0.00 0.00 4.46
4814 5293 4.575885 TCAGTTTTCTTCTATTGGTCCCG 58.424 43.478 0.00 0.00 0.00 5.14
4815 5294 3.127030 CAGTTTTCTTCTATTGGTCCCGC 59.873 47.826 0.00 0.00 0.00 6.13
4818 5297 3.426787 TTCTTCTATTGGTCCCGCAAA 57.573 42.857 0.00 0.00 0.00 3.68
4819 5298 3.426787 TCTTCTATTGGTCCCGCAAAA 57.573 42.857 0.00 0.00 0.00 2.44
4820 5299 3.757270 TCTTCTATTGGTCCCGCAAAAA 58.243 40.909 0.00 0.00 0.00 1.94
4874 5353 4.914983 ACTGAACATCTTCATGTCATGGT 58.085 39.130 12.90 0.00 42.89 3.55
5046 5525 2.202703 GCGCCGGTGAAGTACGAT 60.203 61.111 21.76 0.00 0.00 3.73
5548 6027 7.033530 ACTGTACAGTATCAGACTTGCTATC 57.966 40.000 26.91 0.00 40.43 2.08
5639 6125 4.774124 TCTATTTCTGATTGTCAGGCTGG 58.226 43.478 15.73 0.00 44.39 4.85
5807 6293 5.953571 TCTAGCTACATTACAGATGGGAGA 58.046 41.667 0.00 0.00 0.00 3.71
5950 6436 0.309302 CGTCAGATCCGAGCCTACTG 59.691 60.000 0.00 0.00 0.00 2.74
6124 6614 1.822186 GTGCCAACCCACTTCGTGT 60.822 57.895 0.00 0.00 33.02 4.49
6156 6646 4.081752 TGCACACAAGGAACAAAATTCACT 60.082 37.500 0.00 0.00 0.00 3.41
6218 6710 6.273730 TCAGGAAGAGGGTGGTAAAAGATAAA 59.726 38.462 0.00 0.00 0.00 1.40
6271 6763 8.016229 CACATAGTAGTTGAGCTTATAGGTACG 58.984 40.741 0.00 0.00 0.00 3.67
6302 6794 6.305272 TGAGAGCTTTCTCCAGTATCAAAT 57.695 37.500 5.77 0.00 40.22 2.32
6307 6799 7.554476 AGAGCTTTCTCCAGTATCAAATTTACC 59.446 37.037 0.00 0.00 40.22 2.85
6381 6873 8.587608 ACCTGAATAATTCACAATTTCACATGT 58.412 29.630 0.00 0.00 35.46 3.21
6382 6874 9.426837 CCTGAATAATTCACAATTTCACATGTT 57.573 29.630 0.00 0.00 35.46 2.71
6488 6981 8.629158 TGCAACATAACAAAACTAAGATCACTT 58.371 29.630 0.00 0.00 39.81 3.16
6489 6982 8.905702 GCAACATAACAAAACTAAGATCACTTG 58.094 33.333 0.00 0.00 37.53 3.16
6490 6983 9.398170 CAACATAACAAAACTAAGATCACTTGG 57.602 33.333 0.00 0.00 39.85 3.61
6491 6984 8.691661 ACATAACAAAACTAAGATCACTTGGT 57.308 30.769 0.00 0.00 46.84 3.67
6492 6985 8.567948 ACATAACAAAACTAAGATCACTTGGTG 58.432 33.333 0.00 0.00 44.77 4.17
6493 6986 8.783093 CATAACAAAACTAAGATCACTTGGTGA 58.217 33.333 2.80 2.80 44.77 4.02
6508 7001 8.642935 TCACTTGGTGATGGAAATATTAAACA 57.357 30.769 0.00 0.00 37.67 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.558294 GGGACGGAGGGAGTATTTTGT 59.442 52.381 0.00 0.00 0.00 2.83
4 5 1.557832 TGGGACGGAGGGAGTATTTTG 59.442 52.381 0.00 0.00 0.00 2.44
5 6 1.961133 TGGGACGGAGGGAGTATTTT 58.039 50.000 0.00 0.00 0.00 1.82
6 7 2.191981 ATGGGACGGAGGGAGTATTT 57.808 50.000 0.00 0.00 0.00 1.40
7 8 3.339713 TTATGGGACGGAGGGAGTATT 57.660 47.619 0.00 0.00 0.00 1.89
8 9 3.562108 ATTATGGGACGGAGGGAGTAT 57.438 47.619 0.00 0.00 0.00 2.12
9 10 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
10 11 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
11 12 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
12 13 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
13 14 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
14 15 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
15 16 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
16 17 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
17 18 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
18 19 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
19 20 7.360361 CCAAAAACGCTCTTATATTATGGGAC 58.640 38.462 0.00 0.00 0.00 4.46
20 21 6.016610 GCCAAAAACGCTCTTATATTATGGGA 60.017 38.462 0.00 0.00 0.00 4.37
21 22 6.149633 GCCAAAAACGCTCTTATATTATGGG 58.850 40.000 0.00 0.00 0.00 4.00
22 23 6.636850 GTGCCAAAAACGCTCTTATATTATGG 59.363 38.462 0.00 0.00 0.00 2.74
23 24 7.417612 AGTGCCAAAAACGCTCTTATATTATG 58.582 34.615 0.00 0.00 0.00 1.90
24 25 7.568199 AGTGCCAAAAACGCTCTTATATTAT 57.432 32.000 0.00 0.00 0.00 1.28
25 26 6.995511 AGTGCCAAAAACGCTCTTATATTA 57.004 33.333 0.00 0.00 0.00 0.98
26 27 5.897377 AGTGCCAAAAACGCTCTTATATT 57.103 34.783 0.00 0.00 0.00 1.28
27 28 5.878116 TGTAGTGCCAAAAACGCTCTTATAT 59.122 36.000 0.00 0.00 32.65 0.86
28 29 5.121142 GTGTAGTGCCAAAAACGCTCTTATA 59.879 40.000 0.00 0.00 32.65 0.98
29 30 4.069304 TGTAGTGCCAAAAACGCTCTTAT 58.931 39.130 0.00 0.00 32.65 1.73
30 31 3.249080 GTGTAGTGCCAAAAACGCTCTTA 59.751 43.478 0.00 0.00 32.65 2.10
31 32 2.032924 GTGTAGTGCCAAAAACGCTCTT 59.967 45.455 0.00 0.00 32.65 2.85
32 33 1.602377 GTGTAGTGCCAAAAACGCTCT 59.398 47.619 0.00 0.00 34.63 4.09
33 34 1.602377 AGTGTAGTGCCAAAAACGCTC 59.398 47.619 0.00 0.00 0.00 5.03
34 35 1.675552 AGTGTAGTGCCAAAAACGCT 58.324 45.000 0.00 0.00 0.00 5.07
35 36 3.612472 TTAGTGTAGTGCCAAAAACGC 57.388 42.857 0.00 0.00 0.00 4.84
36 37 4.736307 GGTTTTAGTGTAGTGCCAAAAACG 59.264 41.667 0.00 0.00 37.57 3.60
37 38 4.736307 CGGTTTTAGTGTAGTGCCAAAAAC 59.264 41.667 0.00 0.00 36.54 2.43
38 39 4.734108 GCGGTTTTAGTGTAGTGCCAAAAA 60.734 41.667 0.00 0.00 0.00 1.94
39 40 3.243134 GCGGTTTTAGTGTAGTGCCAAAA 60.243 43.478 0.00 0.00 0.00 2.44
40 41 2.291190 GCGGTTTTAGTGTAGTGCCAAA 59.709 45.455 0.00 0.00 0.00 3.28
41 42 1.874872 GCGGTTTTAGTGTAGTGCCAA 59.125 47.619 0.00 0.00 0.00 4.52
42 43 1.071071 AGCGGTTTTAGTGTAGTGCCA 59.929 47.619 0.00 0.00 0.00 4.92
43 44 1.730612 GAGCGGTTTTAGTGTAGTGCC 59.269 52.381 0.00 0.00 0.00 5.01
44 45 2.685100 AGAGCGGTTTTAGTGTAGTGC 58.315 47.619 0.00 0.00 0.00 4.40
45 46 8.644318 AATATAAGAGCGGTTTTAGTGTAGTG 57.356 34.615 3.90 0.00 0.00 2.74
48 49 9.701098 CCATAATATAAGAGCGGTTTTAGTGTA 57.299 33.333 3.90 0.00 0.00 2.90
49 50 7.660208 CCCATAATATAAGAGCGGTTTTAGTGT 59.340 37.037 3.90 0.00 0.00 3.55
50 51 7.876068 TCCCATAATATAAGAGCGGTTTTAGTG 59.124 37.037 3.90 0.00 0.00 2.74
51 52 7.876582 GTCCCATAATATAAGAGCGGTTTTAGT 59.123 37.037 3.90 0.00 0.00 2.24
52 53 7.063074 CGTCCCATAATATAAGAGCGGTTTTAG 59.937 40.741 3.90 0.00 0.00 1.85
53 54 6.869913 CGTCCCATAATATAAGAGCGGTTTTA 59.130 38.462 0.00 0.00 0.00 1.52
54 55 5.699458 CGTCCCATAATATAAGAGCGGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
55 56 5.235516 CGTCCCATAATATAAGAGCGGTTT 58.764 41.667 0.00 0.00 0.00 3.27
56 57 4.322499 CCGTCCCATAATATAAGAGCGGTT 60.322 45.833 0.00 0.00 0.00 4.44
57 58 3.194968 CCGTCCCATAATATAAGAGCGGT 59.805 47.826 0.00 0.00 0.00 5.68
58 59 3.446161 TCCGTCCCATAATATAAGAGCGG 59.554 47.826 0.00 0.00 37.15 5.52
59 60 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
60 61 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
61 62 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
62 63 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
63 64 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
64 65 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
65 66 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
66 67 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
67 68 3.140707 TGTACTCCCTCCGTCCCATAATA 59.859 47.826 0.00 0.00 0.00 0.98
68 69 2.090943 TGTACTCCCTCCGTCCCATAAT 60.091 50.000 0.00 0.00 0.00 1.28
69 70 1.288633 TGTACTCCCTCCGTCCCATAA 59.711 52.381 0.00 0.00 0.00 1.90
70 71 0.928505 TGTACTCCCTCCGTCCCATA 59.071 55.000 0.00 0.00 0.00 2.74
71 72 0.042131 TTGTACTCCCTCCGTCCCAT 59.958 55.000 0.00 0.00 0.00 4.00
72 73 0.613853 CTTGTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
73 74 0.614134 ACTTGTACTCCCTCCGTCCC 60.614 60.000 0.00 0.00 0.00 4.46
74 75 1.264295 AACTTGTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
75 76 3.087781 ACTAACTTGTACTCCCTCCGTC 58.912 50.000 0.00 0.00 0.00 4.79
76 77 3.087781 GACTAACTTGTACTCCCTCCGT 58.912 50.000 0.00 0.00 0.00 4.69
77 78 3.354467 AGACTAACTTGTACTCCCTCCG 58.646 50.000 0.00 0.00 0.00 4.63
78 79 6.847421 TTTAGACTAACTTGTACTCCCTCC 57.153 41.667 0.00 0.00 0.00 4.30
79 80 9.152595 CATTTTTAGACTAACTTGTACTCCCTC 57.847 37.037 0.00 0.00 0.00 4.30
80 81 8.101419 CCATTTTTAGACTAACTTGTACTCCCT 58.899 37.037 0.00 0.00 0.00 4.20
81 82 7.881751 ACCATTTTTAGACTAACTTGTACTCCC 59.118 37.037 0.00 0.00 0.00 4.30
82 83 8.843885 ACCATTTTTAGACTAACTTGTACTCC 57.156 34.615 0.00 0.00 0.00 3.85
120 121 4.058124 TCCTCATTTCAAAGCGGATATCG 58.942 43.478 0.00 0.00 42.76 2.92
121 122 5.561725 GCTTCCTCATTTCAAAGCGGATATC 60.562 44.000 0.00 0.00 35.29 1.63
122 123 4.276926 GCTTCCTCATTTCAAAGCGGATAT 59.723 41.667 0.00 0.00 35.29 1.63
128 129 3.665745 TTGGCTTCCTCATTTCAAAGC 57.334 42.857 0.00 0.00 42.60 3.51
156 157 3.873952 GGAAGTAGATTGATGCGCTTTCT 59.126 43.478 9.73 5.05 0.00 2.52
157 158 3.623060 TGGAAGTAGATTGATGCGCTTTC 59.377 43.478 9.73 6.46 0.00 2.62
183 184 9.548208 GCTAGATAGTTTGAAAGTGTTCATTTC 57.452 33.333 0.00 0.00 43.29 2.17
198 199 8.680903 CATGATTCTTTTGTGGCTAGATAGTTT 58.319 33.333 0.00 0.00 0.00 2.66
202 203 7.012704 GCTTCATGATTCTTTTGTGGCTAGATA 59.987 37.037 0.00 0.00 0.00 1.98
231 232 0.830648 CCCCTGGCTCTTTGTATCGA 59.169 55.000 0.00 0.00 0.00 3.59
243 244 0.468771 CCCTCATCATTTCCCCTGGC 60.469 60.000 0.00 0.00 0.00 4.85
244 245 1.144503 CTCCCTCATCATTTCCCCTGG 59.855 57.143 0.00 0.00 0.00 4.45
254 255 1.203237 TTGATTCCGCTCCCTCATCA 58.797 50.000 0.00 0.00 0.00 3.07
294 295 7.227711 TGACATTTCGGTTGATCTGTTTTCTTA 59.772 33.333 0.00 0.00 0.00 2.10
297 298 5.757886 TGACATTTCGGTTGATCTGTTTTC 58.242 37.500 0.00 0.00 0.00 2.29
305 308 8.739039 TCTGAAATTTATGACATTTCGGTTGAT 58.261 29.630 11.96 0.00 43.36 2.57
312 315 9.028185 GGCAATCTCTGAAATTTATGACATTTC 57.972 33.333 0.00 0.00 39.94 2.17
334 337 0.470080 TTTGGAAATGTCCCGGGCAA 60.470 50.000 18.49 9.73 44.23 4.52
355 358 8.632906 AAATTATGCATGGTTTCAAATTTCCA 57.367 26.923 10.16 0.00 0.00 3.53
371 374 4.035558 GCATCTCGGAGTGAAAATTATGCA 59.964 41.667 15.15 0.00 31.55 3.96
401 404 2.489329 GCTGAAGCTGTTCCAAAGCATA 59.511 45.455 0.00 0.00 43.37 3.14
415 418 3.059325 CGCCTCATAGTAATTGCTGAAGC 60.059 47.826 6.28 1.78 42.50 3.86
467 470 2.510613 TGAAGACCGTTTCAATTCCCC 58.489 47.619 0.00 0.00 34.32 4.81
480 483 4.878397 CACATGAAACTCCCTATGAAGACC 59.122 45.833 0.00 0.00 0.00 3.85
484 487 3.849574 TCCCACATGAAACTCCCTATGAA 59.150 43.478 0.00 0.00 0.00 2.57
494 497 0.251341 ACCTGGCTCCCACATGAAAC 60.251 55.000 0.00 0.00 0.00 2.78
510 514 0.962489 CTTCGTGGTGACAGAGACCT 59.038 55.000 0.00 0.00 44.46 3.85
525 529 1.065551 GAATTGATTTCCGGGCCTTCG 59.934 52.381 0.84 0.00 0.00 3.79
613 617 0.321298 TCTTGGGGACTAGTTTGCGC 60.321 55.000 0.00 0.00 34.59 6.09
615 619 6.775594 ATTATTTCTTGGGGACTAGTTTGC 57.224 37.500 0.00 0.00 34.59 3.68
619 623 9.794719 GCTTATTATTATTTCTTGGGGACTAGT 57.205 33.333 0.00 0.00 34.59 2.57
620 624 9.793259 TGCTTATTATTATTTCTTGGGGACTAG 57.207 33.333 0.00 0.00 34.24 2.57
622 626 9.136323 CTTGCTTATTATTATTTCTTGGGGACT 57.864 33.333 0.00 0.00 0.00 3.85
623 627 8.914011 ACTTGCTTATTATTATTTCTTGGGGAC 58.086 33.333 0.00 0.00 0.00 4.46
646 650 9.533253 CTTGAATGAATTGAACACCTTTTACTT 57.467 29.630 0.00 0.00 0.00 2.24
667 671 6.713762 TTTCTTTGGCATCTTCTTCTTGAA 57.286 33.333 0.00 0.00 0.00 2.69
668 672 6.713762 TTTTCTTTGGCATCTTCTTCTTGA 57.286 33.333 0.00 0.00 0.00 3.02
669 673 6.423001 CCTTTTTCTTTGGCATCTTCTTCTTG 59.577 38.462 0.00 0.00 0.00 3.02
670 674 6.463472 CCCTTTTTCTTTGGCATCTTCTTCTT 60.463 38.462 0.00 0.00 0.00 2.52
671 675 5.011431 CCCTTTTTCTTTGGCATCTTCTTCT 59.989 40.000 0.00 0.00 0.00 2.85
672 676 5.011023 TCCCTTTTTCTTTGGCATCTTCTTC 59.989 40.000 0.00 0.00 0.00 2.87
673 677 4.901250 TCCCTTTTTCTTTGGCATCTTCTT 59.099 37.500 0.00 0.00 0.00 2.52
674 678 4.482990 TCCCTTTTTCTTTGGCATCTTCT 58.517 39.130 0.00 0.00 0.00 2.85
675 679 4.871933 TCCCTTTTTCTTTGGCATCTTC 57.128 40.909 0.00 0.00 0.00 2.87
680 684 2.360801 CTCGTTCCCTTTTTCTTTGGCA 59.639 45.455 0.00 0.00 0.00 4.92
701 705 3.637998 CATGGTCATGGCTGCTATTTC 57.362 47.619 0.00 0.00 35.24 2.17
783 788 0.234106 CACTTGTTGTCTCAGCGCAG 59.766 55.000 11.47 0.00 0.00 5.18
787 792 1.024271 TTGGCACTTGTTGTCTCAGC 58.976 50.000 0.00 0.00 0.00 4.26
851 870 3.123620 GCTCGTGCTGCCTGGAAG 61.124 66.667 0.00 0.00 36.03 3.46
928 947 1.567357 TGGACCAGATCAATCCACGA 58.433 50.000 8.18 0.00 37.60 4.35
932 951 6.127253 ACAATCAAAATGGACCAGATCAATCC 60.127 38.462 0.00 0.00 0.00 3.01
941 960 3.383620 GTGCACAATCAAAATGGACCA 57.616 42.857 13.17 0.00 0.00 4.02
974 993 1.009829 CTCAACGAACCAGCCTATGC 58.990 55.000 0.00 0.00 37.95 3.14
975 994 1.009829 GCTCAACGAACCAGCCTATG 58.990 55.000 0.00 0.00 0.00 2.23
976 995 3.460648 GCTCAACGAACCAGCCTAT 57.539 52.632 0.00 0.00 0.00 2.57
993 1012 3.124921 CGTCCCACCATGAACCGC 61.125 66.667 0.00 0.00 0.00 5.68
1302 1321 2.254651 GTGCAGTTGAGCAGCAGC 59.745 61.111 0.00 0.00 46.69 5.25
1365 1390 2.768527 TCTCCTCCAACTCTAAGGCATG 59.231 50.000 0.00 0.00 0.00 4.06
1381 1406 7.781324 TCATTTTAGCCAAAATTCTTCTCCT 57.219 32.000 0.00 0.00 41.41 3.69
1415 1440 5.673514 ACACAGCTCAACAAATTCCATTTT 58.326 33.333 0.00 0.00 0.00 1.82
1418 1443 4.341806 TGAACACAGCTCAACAAATTCCAT 59.658 37.500 0.00 0.00 0.00 3.41
1435 1464 8.543774 GTGCATATAGATCTAACAGTTGAACAC 58.456 37.037 6.52 3.03 0.00 3.32
1614 1667 3.057104 TCATGCTGCTCTGATTTGTTTGG 60.057 43.478 0.00 0.00 0.00 3.28
1620 1673 2.391616 TCGTCATGCTGCTCTGATTT 57.608 45.000 0.00 0.00 0.00 2.17
1702 1892 0.874390 TAGTAACTGTTCCGTCGCGT 59.126 50.000 5.77 0.00 0.00 6.01
1703 1893 1.253999 GTAGTAACTGTTCCGTCGCG 58.746 55.000 0.00 0.00 0.00 5.87
1704 1894 2.336554 TGTAGTAACTGTTCCGTCGC 57.663 50.000 0.00 0.00 0.00 5.19
1708 1898 8.219105 GTGTATTCTTTTGTAGTAACTGTTCCG 58.781 37.037 0.00 0.00 0.00 4.30
1718 1908 8.123639 TCTGCTAGAGTGTATTCTTTTGTAGT 57.876 34.615 0.00 0.00 0.00 2.73
1730 1920 7.410120 TTGATGAATTCTCTGCTAGAGTGTA 57.590 36.000 7.05 2.35 42.83 2.90
1841 2073 6.203338 ACGCGTTCTCTAATTTCCTTACAAAA 59.797 34.615 5.58 0.00 0.00 2.44
1844 2076 4.813027 ACGCGTTCTCTAATTTCCTTACA 58.187 39.130 5.58 0.00 0.00 2.41
1845 2077 5.498226 CGAACGCGTTCTCTAATTTCCTTAC 60.498 44.000 39.54 16.24 37.44 2.34
1846 2078 4.560035 CGAACGCGTTCTCTAATTTCCTTA 59.440 41.667 39.54 0.00 37.44 2.69
1847 2079 3.367025 CGAACGCGTTCTCTAATTTCCTT 59.633 43.478 39.54 10.19 37.44 3.36
1848 2080 2.921754 CGAACGCGTTCTCTAATTTCCT 59.078 45.455 39.54 10.65 37.44 3.36
1906 2146 1.812922 CAGCTCCGTCATCTGCACC 60.813 63.158 0.00 0.00 0.00 5.01
2244 2498 2.887568 GCCGTCCACAGCTGATCG 60.888 66.667 23.35 17.24 0.00 3.69
2509 2772 5.240403 GCTGATAATTTGAATCCTGAGTCCC 59.760 44.000 0.00 0.00 0.00 4.46
2514 2777 7.515586 AGATCAGCTGATAATTTGAATCCTGA 58.484 34.615 28.78 0.00 34.37 3.86
2517 2780 6.713903 TGGAGATCAGCTGATAATTTGAATCC 59.286 38.462 28.78 21.72 34.37 3.01
2521 2790 5.819379 GTGTGGAGATCAGCTGATAATTTGA 59.181 40.000 28.78 9.68 34.37 2.69
2528 2797 3.996921 AAAGTGTGGAGATCAGCTGAT 57.003 42.857 29.09 29.09 37.51 2.90
2683 2953 2.371179 TCGGGTTGGTTGTGTGGTTATA 59.629 45.455 0.00 0.00 0.00 0.98
2694 2964 1.205179 GTTTTGGTTGTCGGGTTGGTT 59.795 47.619 0.00 0.00 0.00 3.67
2963 3235 0.882484 TGCGCGACAAGGTTGATGAA 60.882 50.000 12.10 0.00 0.00 2.57
3340 3687 2.426024 GTGTCGGCTACTGTTGAGGATA 59.574 50.000 0.00 0.00 0.00 2.59
3616 3963 4.507710 TGCAGTTTATCAGTGTGGAGATC 58.492 43.478 0.00 0.00 0.00 2.75
3617 3964 4.558226 TGCAGTTTATCAGTGTGGAGAT 57.442 40.909 0.00 0.00 0.00 2.75
3618 3965 4.020307 TCATGCAGTTTATCAGTGTGGAGA 60.020 41.667 0.00 0.00 0.00 3.71
3619 3966 4.256110 TCATGCAGTTTATCAGTGTGGAG 58.744 43.478 0.00 0.00 0.00 3.86
3620 3967 4.284829 TCATGCAGTTTATCAGTGTGGA 57.715 40.909 0.00 0.00 0.00 4.02
3621 3968 5.375417 TTTCATGCAGTTTATCAGTGTGG 57.625 39.130 0.00 0.00 0.00 4.17
3622 3969 6.441274 AGTTTTCATGCAGTTTATCAGTGTG 58.559 36.000 0.00 0.00 0.00 3.82
3623 3970 6.639632 AGTTTTCATGCAGTTTATCAGTGT 57.360 33.333 0.00 0.00 0.00 3.55
3624 3971 7.538678 GGTTAGTTTTCATGCAGTTTATCAGTG 59.461 37.037 0.00 0.00 0.00 3.66
3625 3972 7.309194 GGGTTAGTTTTCATGCAGTTTATCAGT 60.309 37.037 0.00 0.00 0.00 3.41
3626 3973 7.029563 GGGTTAGTTTTCATGCAGTTTATCAG 58.970 38.462 0.00 0.00 0.00 2.90
3627 3974 6.071616 GGGGTTAGTTTTCATGCAGTTTATCA 60.072 38.462 0.00 0.00 0.00 2.15
3628 3975 6.071616 TGGGGTTAGTTTTCATGCAGTTTATC 60.072 38.462 0.00 0.00 0.00 1.75
3657 4004 2.289257 TGCTCACAGATTCACAGAGTGG 60.289 50.000 0.00 0.00 33.87 4.00
3658 4005 3.036075 TGCTCACAGATTCACAGAGTG 57.964 47.619 0.00 0.00 34.45 3.51
3687 4034 1.664321 ATGTGCGTCCCGTACCTCTC 61.664 60.000 2.57 0.00 41.42 3.20
3691 4038 2.581409 CGATGTGCGTCCCGTACC 60.581 66.667 2.57 0.00 41.42 3.34
3800 4147 1.439644 CTGGTCGCCTAGCTTCTCC 59.560 63.158 0.00 0.00 0.00 3.71
3855 4202 4.323104 GGTCTTGTTATCTCTGGACTTGCT 60.323 45.833 0.00 0.00 0.00 3.91
3931 4278 2.472695 AGCACATTTCGCTTGAGGTA 57.527 45.000 0.00 0.00 35.82 3.08
3940 4287 5.757886 TGGAGTTCTTTTAAGCACATTTCG 58.242 37.500 0.00 0.00 0.00 3.46
3969 4316 1.922369 AGGGACCTGCTGCAGTCAT 60.922 57.895 26.41 12.81 0.00 3.06
3978 4325 3.334054 AAGGCCTCAGGGACCTGC 61.334 66.667 5.23 2.09 43.15 4.85
4050 4397 0.727398 GTACCTCTTTGCATGCGACC 59.273 55.000 14.09 0.00 0.00 4.79
4144 4499 5.500645 TCTTGGAGTATATCACTGTCACG 57.499 43.478 0.00 0.00 37.72 4.35
4150 4505 4.746466 CTCCCCTCTTGGAGTATATCACT 58.254 47.826 0.00 0.00 45.76 3.41
4300 4655 2.880890 CAGGTAGAGGTTTATGGCATGC 59.119 50.000 9.90 9.90 0.00 4.06
4345 4705 5.591099 ACTGCTAGACCAAAAATGTTGTTG 58.409 37.500 0.00 0.00 0.00 3.33
4375 4755 3.929610 CGTTCTCTCCTCTGGTGATTTTC 59.070 47.826 0.00 0.00 0.00 2.29
4383 4763 3.066064 CACATAGACGTTCTCTCCTCTGG 59.934 52.174 0.00 0.00 0.00 3.86
4386 4766 2.423892 TGCACATAGACGTTCTCTCCTC 59.576 50.000 0.00 0.00 0.00 3.71
4395 4775 4.437390 GCATTTTTAGCTGCACATAGACGT 60.437 41.667 1.02 0.00 38.28 4.34
4402 4782 5.452078 AGTTAAGCATTTTTAGCTGCACA 57.548 34.783 1.02 0.00 42.53 4.57
4403 4783 7.029563 ACATAGTTAAGCATTTTTAGCTGCAC 58.970 34.615 1.02 0.00 42.53 4.57
4405 4785 7.218963 GTGACATAGTTAAGCATTTTTAGCTGC 59.781 37.037 0.00 0.00 42.53 5.25
4406 4786 8.454106 AGTGACATAGTTAAGCATTTTTAGCTG 58.546 33.333 0.00 0.00 42.53 4.24
4407 4787 8.454106 CAGTGACATAGTTAAGCATTTTTAGCT 58.546 33.333 0.00 0.00 45.97 3.32
4408 4788 8.450964 TCAGTGACATAGTTAAGCATTTTTAGC 58.549 33.333 0.00 0.00 0.00 3.09
4434 4904 1.075536 GGGGGTTTGTCTGTTGGAGAT 59.924 52.381 0.00 0.00 31.63 2.75
4438 4908 1.901464 CCGGGGGTTTGTCTGTTGG 60.901 63.158 0.00 0.00 0.00 3.77
4439 4909 0.108963 TACCGGGGGTTTGTCTGTTG 59.891 55.000 6.32 0.00 37.09 3.33
4452 4923 3.705072 AGTACCTCAAATCTTCTACCGGG 59.295 47.826 6.32 0.00 0.00 5.73
4500 4971 3.736224 CTGAGCACAGGGGCCCAT 61.736 66.667 27.72 16.07 40.14 4.00
4639 5117 3.936453 CCATTGGATTTGCAGATGGTTTG 59.064 43.478 0.00 0.00 34.06 2.93
4651 5129 3.305720 AGCATGCATCTCCATTGGATTT 58.694 40.909 21.98 0.00 0.00 2.17
4737 5215 2.736670 ACCTGTTGTTCTTCTTGCCT 57.263 45.000 0.00 0.00 0.00 4.75
4797 5276 3.426787 TTGCGGGACCAATAGAAGAAA 57.573 42.857 0.00 0.00 0.00 2.52
4799 5278 3.426787 TTTTGCGGGACCAATAGAAGA 57.573 42.857 0.00 0.00 0.00 2.87
4827 5306 9.750125 GTCAACATTCCAATAGAAGAAAACTTT 57.250 29.630 0.00 0.00 38.07 2.66
4828 5307 9.136323 AGTCAACATTCCAATAGAAGAAAACTT 57.864 29.630 0.00 0.00 38.07 2.66
4829 5308 8.571336 CAGTCAACATTCCAATAGAAGAAAACT 58.429 33.333 0.00 0.00 38.07 2.66
4830 5309 8.567948 TCAGTCAACATTCCAATAGAAGAAAAC 58.432 33.333 0.00 0.00 38.07 2.43
4831 5310 8.690203 TCAGTCAACATTCCAATAGAAGAAAA 57.310 30.769 0.00 0.00 38.07 2.29
4832 5311 8.567948 GTTCAGTCAACATTCCAATAGAAGAAA 58.432 33.333 0.00 0.00 38.07 2.52
4833 5312 7.719193 TGTTCAGTCAACATTCCAATAGAAGAA 59.281 33.333 0.00 0.00 40.29 2.52
4834 5313 7.223584 TGTTCAGTCAACATTCCAATAGAAGA 58.776 34.615 0.00 0.00 40.29 2.87
4835 5314 7.439157 TGTTCAGTCAACATTCCAATAGAAG 57.561 36.000 0.00 0.00 40.29 2.85
5146 5625 1.215647 CCAGCTCGGTGTACAGGAC 59.784 63.158 0.00 0.00 0.00 3.85
5418 5897 0.320771 CACCTGTGACCAGCCAGTAC 60.321 60.000 0.00 0.00 37.38 2.73
5639 6125 7.672738 ACAATACTCGTCGTTGATTTACATTC 58.327 34.615 0.84 0.00 0.00 2.67
5807 6293 2.203596 ACGGGTCTCCACGTCCTT 60.204 61.111 0.00 0.00 39.40 3.36
5851 6337 1.012486 GCCCTCGTTTTGTCGTCGAT 61.012 55.000 0.00 0.00 33.26 3.59
6018 6505 6.823531 TCTGTATTTGTTTCGTTCCATTACG 58.176 36.000 0.00 0.00 42.68 3.18
6065 6555 0.108945 ACTAACTTGAGGCGGCGTAC 60.109 55.000 9.37 1.56 0.00 3.67
6156 6646 3.714798 ACAGTTTCTTCCTCTAACCCACA 59.285 43.478 0.00 0.00 0.00 4.17
6302 6794 9.921637 CTTAGAATTATTTTGCCACTTGGTAAA 57.078 29.630 7.37 7.37 45.78 2.01
6307 6799 8.538409 AAAGCTTAGAATTATTTTGCCACTTG 57.462 30.769 0.00 0.00 0.00 3.16
6415 6907 9.640963 TTTGCTCTTAGTGATTAGTTCTCTTAC 57.359 33.333 0.00 0.00 30.95 2.34
6466 6959 8.567948 CACCAAGTGATCTTAGTTTTGTTATGT 58.432 33.333 0.00 0.00 35.23 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.