Multiple sequence alignment - TraesCS7A01G199500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G199500 chr7A 100.000 2616 0 0 1 2616 162455366 162452751 0.000000e+00 4831.0
1 TraesCS7A01G199500 chr7A 79.433 987 105 51 471 1380 162415103 162414138 2.230000e-170 608.0
2 TraesCS7A01G199500 chr7A 85.526 228 27 3 1161 1382 162400452 162400225 1.570000e-57 233.0
3 TraesCS7A01G199500 chr7A 91.667 168 14 0 15 182 556161175 556161342 1.570000e-57 233.0
4 TraesCS7A01G199500 chr7A 82.099 162 15 12 1423 1581 162414139 162413989 2.730000e-25 126.0
5 TraesCS7A01G199500 chr7B 92.063 1197 74 10 329 1509 123289129 123287938 0.000000e+00 1664.0
6 TraesCS7A01G199500 chr7B 82.154 1328 142 54 488 1769 123285758 123284480 0.000000e+00 1051.0
7 TraesCS7A01G199500 chr7B 85.965 228 26 4 1161 1382 123278356 123278129 3.360000e-59 239.0
8 TraesCS7A01G199500 chr7B 100.000 29 0 0 1776 1804 592350615 592350643 1.000000e-03 54.7
9 TraesCS7A01G199500 chr7D 80.645 2170 302 66 488 2609 161058114 161056015 0.000000e+00 1572.0
10 TraesCS7A01G199500 chr7D 88.393 1232 86 13 286 1509 161061524 161060342 0.000000e+00 1430.0
11 TraesCS7A01G199500 chr7D 84.581 895 95 27 814 1685 161040445 161039571 0.000000e+00 848.0
12 TraesCS7A01G199500 chr2A 92.353 170 13 0 15 184 169355725 169355556 2.600000e-60 243.0
13 TraesCS7A01G199500 chr5D 92.308 169 13 0 15 183 418294129 418294297 9.360000e-60 241.0
14 TraesCS7A01G199500 chr5D 90.286 175 15 2 15 189 441406799 441406627 7.280000e-56 228.0
15 TraesCS7A01G199500 chr3B 92.814 167 11 1 15 180 662488996 662488830 9.360000e-60 241.0
16 TraesCS7A01G199500 chr3B 75.953 341 78 4 2076 2415 245357033 245356696 3.460000e-39 172.0
17 TraesCS7A01G199500 chr3D 91.176 170 15 0 15 184 563449098 563448929 5.630000e-57 231.0
18 TraesCS7A01G199500 chr3D 73.479 411 82 19 2204 2607 170193172 170192782 2.110000e-26 130.0
19 TraesCS7A01G199500 chr1A 91.176 170 15 0 15 184 367439836 367439667 5.630000e-57 231.0
20 TraesCS7A01G199500 chr2D 91.124 169 15 0 15 183 541547374 541547542 2.030000e-56 230.0
21 TraesCS7A01G199500 chr4B 90.588 170 14 2 15 183 413123550 413123382 9.420000e-55 224.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G199500 chr7A 162452751 162455366 2615 True 4831.0 4831 100.0000 1 2616 1 chr7A.!!$R2 2615
1 TraesCS7A01G199500 chr7A 162413989 162415103 1114 True 367.0 608 80.7660 471 1581 2 chr7A.!!$R3 1110
2 TraesCS7A01G199500 chr7B 123284480 123289129 4649 True 1357.5 1664 87.1085 329 1769 2 chr7B.!!$R2 1440
3 TraesCS7A01G199500 chr7D 161056015 161061524 5509 True 1501.0 1572 84.5190 286 2609 2 chr7D.!!$R2 2323
4 TraesCS7A01G199500 chr7D 161039571 161040445 874 True 848.0 848 84.5810 814 1685 1 chr7D.!!$R1 871

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 224 0.104304 GCCCGTCTTGTATCCGTGAT 59.896 55.0 0.0 0.0 0.0 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1981 8616 0.036164 TCAAATGGGCTAGCGTGTGT 59.964 50.0 9.0 0.0 0.0 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 7.349412 ACGGAGGGAGTATTATATGATTAGC 57.651 40.000 0.00 0.00 0.00 3.09
29 30 6.895756 ACGGAGGGAGTATTATATGATTAGCA 59.104 38.462 0.00 0.00 0.00 3.49
30 31 7.147880 ACGGAGGGAGTATTATATGATTAGCAC 60.148 40.741 0.00 0.00 0.00 4.40
31 32 7.068839 CGGAGGGAGTATTATATGATTAGCACT 59.931 40.741 0.00 0.00 0.00 4.40
32 33 9.422681 GGAGGGAGTATTATATGATTAGCACTA 57.577 37.037 0.00 0.00 0.00 2.74
72 73 5.779806 ACTACATGATAAACGTGTTGAGC 57.220 39.130 0.00 0.00 45.16 4.26
73 74 3.722555 ACATGATAAACGTGTTGAGCG 57.277 42.857 0.00 0.00 45.16 5.03
74 75 2.159707 ACATGATAAACGTGTTGAGCGC 60.160 45.455 0.00 0.00 45.16 5.92
75 76 1.790755 TGATAAACGTGTTGAGCGCT 58.209 45.000 11.27 11.27 0.00 5.92
76 77 1.724623 TGATAAACGTGTTGAGCGCTC 59.275 47.619 30.42 30.42 0.00 5.03
77 78 0.713883 ATAAACGTGTTGAGCGCTCG 59.286 50.000 30.75 21.89 0.00 5.03
78 79 0.318022 TAAACGTGTTGAGCGCTCGA 60.318 50.000 30.75 27.40 0.00 4.04
79 80 1.818221 AAACGTGTTGAGCGCTCGAC 61.818 55.000 39.44 39.44 42.86 4.20
82 83 4.673403 TGTTGAGCGCTCGACATT 57.327 50.000 42.95 9.77 46.09 2.71
83 84 2.153039 TGTTGAGCGCTCGACATTG 58.847 52.632 42.95 0.00 46.09 2.82
84 85 0.319469 TGTTGAGCGCTCGACATTGA 60.319 50.000 42.95 27.81 46.09 2.57
85 86 0.790207 GTTGAGCGCTCGACATTGAA 59.210 50.000 40.41 22.88 42.27 2.69
86 87 1.194547 GTTGAGCGCTCGACATTGAAA 59.805 47.619 40.41 22.22 42.27 2.69
87 88 1.725641 TGAGCGCTCGACATTGAAAT 58.274 45.000 30.75 0.00 0.00 2.17
88 89 2.887337 TGAGCGCTCGACATTGAAATA 58.113 42.857 30.75 7.25 0.00 1.40
89 90 2.860136 TGAGCGCTCGACATTGAAATAG 59.140 45.455 30.75 0.00 0.00 1.73
90 91 1.594862 AGCGCTCGACATTGAAATAGC 59.405 47.619 2.64 0.00 0.00 2.97
91 92 2.270202 CGCTCGACATTGAAATAGCG 57.730 50.000 0.00 0.00 45.48 4.26
92 93 1.588404 CGCTCGACATTGAAATAGCGT 59.412 47.619 14.55 0.00 45.60 5.07
93 94 2.787129 CGCTCGACATTGAAATAGCGTA 59.213 45.455 14.55 0.00 45.60 4.42
94 95 3.121663 CGCTCGACATTGAAATAGCGTAG 60.122 47.826 14.55 2.86 45.60 3.51
95 96 3.182572 GCTCGACATTGAAATAGCGTAGG 59.817 47.826 0.00 0.00 0.00 3.18
96 97 4.360563 CTCGACATTGAAATAGCGTAGGT 58.639 43.478 0.00 0.00 44.89 3.08
97 98 4.357142 TCGACATTGAAATAGCGTAGGTC 58.643 43.478 0.00 0.00 40.68 3.85
98 99 3.179795 CGACATTGAAATAGCGTAGGTCG 59.820 47.826 0.00 0.00 40.68 4.79
99 100 4.110482 GACATTGAAATAGCGTAGGTCGT 58.890 43.478 0.00 0.00 42.13 4.34
100 101 4.501071 ACATTGAAATAGCGTAGGTCGTT 58.499 39.130 0.00 0.00 42.13 3.85
101 102 4.328983 ACATTGAAATAGCGTAGGTCGTTG 59.671 41.667 0.00 0.00 42.13 4.10
102 103 2.883574 TGAAATAGCGTAGGTCGTTGG 58.116 47.619 0.00 0.00 42.13 3.77
103 104 2.492881 TGAAATAGCGTAGGTCGTTGGA 59.507 45.455 0.00 0.00 42.13 3.53
104 105 3.131577 TGAAATAGCGTAGGTCGTTGGAT 59.868 43.478 0.00 0.00 42.13 3.41
105 106 3.814005 AATAGCGTAGGTCGTTGGATT 57.186 42.857 0.00 0.00 42.13 3.01
106 107 2.572191 TAGCGTAGGTCGTTGGATTG 57.428 50.000 0.00 0.00 42.13 2.67
107 108 0.892755 AGCGTAGGTCGTTGGATTGA 59.107 50.000 0.00 0.00 42.13 2.57
108 109 0.997196 GCGTAGGTCGTTGGATTGAC 59.003 55.000 0.00 0.00 42.13 3.18
109 110 1.670674 GCGTAGGTCGTTGGATTGACA 60.671 52.381 0.00 0.00 42.13 3.58
110 111 2.888594 CGTAGGTCGTTGGATTGACAT 58.111 47.619 0.00 0.00 36.83 3.06
111 112 2.603110 CGTAGGTCGTTGGATTGACATG 59.397 50.000 0.00 0.00 36.83 3.21
112 113 3.674955 CGTAGGTCGTTGGATTGACATGA 60.675 47.826 0.00 0.00 36.83 3.07
113 114 3.634397 AGGTCGTTGGATTGACATGAT 57.366 42.857 0.00 0.00 36.83 2.45
114 115 3.955471 AGGTCGTTGGATTGACATGATT 58.045 40.909 0.00 0.00 36.83 2.57
115 116 4.335416 AGGTCGTTGGATTGACATGATTT 58.665 39.130 0.00 0.00 36.83 2.17
116 117 4.156556 AGGTCGTTGGATTGACATGATTTG 59.843 41.667 0.00 0.00 36.83 2.32
117 118 4.155826 GGTCGTTGGATTGACATGATTTGA 59.844 41.667 0.00 0.00 36.83 2.69
118 119 5.088739 GTCGTTGGATTGACATGATTTGAC 58.911 41.667 0.00 0.00 35.20 3.18
119 120 4.090729 CGTTGGATTGACATGATTTGACG 58.909 43.478 0.00 0.00 0.00 4.35
120 121 4.142924 CGTTGGATTGACATGATTTGACGA 60.143 41.667 0.00 0.00 0.00 4.20
121 122 4.944962 TGGATTGACATGATTTGACGAC 57.055 40.909 0.00 0.00 0.00 4.34
122 123 3.689161 TGGATTGACATGATTTGACGACC 59.311 43.478 0.00 0.00 0.00 4.79
123 124 3.689161 GGATTGACATGATTTGACGACCA 59.311 43.478 0.00 0.00 0.00 4.02
124 125 4.155826 GGATTGACATGATTTGACGACCAA 59.844 41.667 0.00 0.00 0.00 3.67
125 126 4.747540 TTGACATGATTTGACGACCAAG 57.252 40.909 0.00 0.00 35.94 3.61
126 127 4.001618 TGACATGATTTGACGACCAAGA 57.998 40.909 0.00 0.00 35.94 3.02
127 128 4.578871 TGACATGATTTGACGACCAAGAT 58.421 39.130 0.00 0.00 35.94 2.40
128 129 5.003160 TGACATGATTTGACGACCAAGATT 58.997 37.500 0.00 0.00 35.94 2.40
129 130 6.169800 TGACATGATTTGACGACCAAGATTA 58.830 36.000 0.00 0.00 35.94 1.75
130 131 6.652900 TGACATGATTTGACGACCAAGATTAA 59.347 34.615 0.00 0.00 35.94 1.40
131 132 7.336679 TGACATGATTTGACGACCAAGATTAAT 59.663 33.333 0.00 0.00 35.94 1.40
132 133 8.055279 ACATGATTTGACGACCAAGATTAATT 57.945 30.769 0.00 0.00 35.94 1.40
133 134 7.970061 ACATGATTTGACGACCAAGATTAATTG 59.030 33.333 0.00 0.00 35.94 2.32
145 146 6.956202 CAAGATTAATTGGATCTGCCTCTT 57.044 37.500 6.85 0.00 34.24 2.85
146 147 7.344095 CAAGATTAATTGGATCTGCCTCTTT 57.656 36.000 6.85 0.00 34.24 2.52
147 148 6.956202 AGATTAATTGGATCTGCCTCTTTG 57.044 37.500 5.62 0.00 37.63 2.77
148 149 5.832060 AGATTAATTGGATCTGCCTCTTTGG 59.168 40.000 5.62 0.00 37.63 3.28
149 150 3.744940 AATTGGATCTGCCTCTTTGGA 57.255 42.857 0.00 0.00 38.35 3.53
150 151 3.967467 ATTGGATCTGCCTCTTTGGAT 57.033 42.857 0.00 0.00 38.35 3.41
151 152 3.287867 TTGGATCTGCCTCTTTGGATC 57.712 47.619 0.00 0.00 38.35 3.36
152 153 2.485659 TGGATCTGCCTCTTTGGATCT 58.514 47.619 0.00 0.00 38.35 2.75
153 154 2.848694 TGGATCTGCCTCTTTGGATCTT 59.151 45.455 0.00 0.00 38.35 2.40
154 155 3.267812 TGGATCTGCCTCTTTGGATCTTT 59.732 43.478 0.00 0.00 38.35 2.52
155 156 4.264083 TGGATCTGCCTCTTTGGATCTTTT 60.264 41.667 0.00 0.00 38.35 2.27
156 157 4.708909 GGATCTGCCTCTTTGGATCTTTTT 59.291 41.667 0.00 0.00 38.35 1.94
157 158 5.888161 GGATCTGCCTCTTTGGATCTTTTTA 59.112 40.000 0.00 0.00 38.35 1.52
158 159 6.548993 GGATCTGCCTCTTTGGATCTTTTTAT 59.451 38.462 0.00 0.00 38.35 1.40
159 160 7.721399 GGATCTGCCTCTTTGGATCTTTTTATA 59.279 37.037 0.00 0.00 38.35 0.98
160 161 9.294614 GATCTGCCTCTTTGGATCTTTTTATAT 57.705 33.333 0.00 0.00 38.35 0.86
161 162 9.652114 ATCTGCCTCTTTGGATCTTTTTATATT 57.348 29.630 0.00 0.00 38.35 1.28
162 163 8.906867 TCTGCCTCTTTGGATCTTTTTATATTG 58.093 33.333 0.00 0.00 38.35 1.90
163 164 8.010733 TGCCTCTTTGGATCTTTTTATATTGG 57.989 34.615 0.00 0.00 38.35 3.16
164 165 7.619302 TGCCTCTTTGGATCTTTTTATATTGGT 59.381 33.333 0.00 0.00 38.35 3.67
165 166 9.131791 GCCTCTTTGGATCTTTTTATATTGGTA 57.868 33.333 0.00 0.00 38.35 3.25
205 206 8.284693 AGATGCAAAACTTGATTTTATGTTTGC 58.715 29.630 10.43 10.43 38.50 3.68
206 207 6.723282 TGCAAAACTTGATTTTATGTTTGCC 58.277 32.000 13.74 0.19 38.50 4.52
207 208 6.142139 GCAAAACTTGATTTTATGTTTGCCC 58.858 36.000 6.90 0.00 38.50 5.36
208 209 6.361899 CAAAACTTGATTTTATGTTTGCCCG 58.638 36.000 0.00 0.00 38.50 6.13
209 210 4.864704 ACTTGATTTTATGTTTGCCCGT 57.135 36.364 0.00 0.00 0.00 5.28
210 211 4.805219 ACTTGATTTTATGTTTGCCCGTC 58.195 39.130 0.00 0.00 0.00 4.79
211 212 4.522789 ACTTGATTTTATGTTTGCCCGTCT 59.477 37.500 0.00 0.00 0.00 4.18
212 213 5.010617 ACTTGATTTTATGTTTGCCCGTCTT 59.989 36.000 0.00 0.00 0.00 3.01
213 214 4.804108 TGATTTTATGTTTGCCCGTCTTG 58.196 39.130 0.00 0.00 0.00 3.02
214 215 4.279671 TGATTTTATGTTTGCCCGTCTTGT 59.720 37.500 0.00 0.00 0.00 3.16
215 216 5.473846 TGATTTTATGTTTGCCCGTCTTGTA 59.526 36.000 0.00 0.00 0.00 2.41
216 217 5.968528 TTTTATGTTTGCCCGTCTTGTAT 57.031 34.783 0.00 0.00 0.00 2.29
217 218 5.554822 TTTATGTTTGCCCGTCTTGTATC 57.445 39.130 0.00 0.00 0.00 2.24
218 219 1.816074 TGTTTGCCCGTCTTGTATCC 58.184 50.000 0.00 0.00 0.00 2.59
219 220 0.725117 GTTTGCCCGTCTTGTATCCG 59.275 55.000 0.00 0.00 0.00 4.18
220 221 0.322322 TTTGCCCGTCTTGTATCCGT 59.678 50.000 0.00 0.00 0.00 4.69
221 222 0.390603 TTGCCCGTCTTGTATCCGTG 60.391 55.000 0.00 0.00 0.00 4.94
222 223 1.252215 TGCCCGTCTTGTATCCGTGA 61.252 55.000 0.00 0.00 0.00 4.35
223 224 0.104304 GCCCGTCTTGTATCCGTGAT 59.896 55.000 0.00 0.00 0.00 3.06
224 225 1.852942 CCCGTCTTGTATCCGTGATG 58.147 55.000 0.00 0.00 0.00 3.07
225 226 1.538204 CCCGTCTTGTATCCGTGATGG 60.538 57.143 0.00 0.00 40.09 3.51
226 227 1.136305 CCGTCTTGTATCCGTGATGGT 59.864 52.381 0.00 0.00 39.52 3.55
227 228 2.193447 CGTCTTGTATCCGTGATGGTG 58.807 52.381 0.00 0.00 39.52 4.17
228 229 2.416836 CGTCTTGTATCCGTGATGGTGT 60.417 50.000 0.00 0.00 39.52 4.16
229 230 3.181494 CGTCTTGTATCCGTGATGGTGTA 60.181 47.826 0.00 0.00 39.52 2.90
230 231 4.360563 GTCTTGTATCCGTGATGGTGTAG 58.639 47.826 0.00 0.00 39.52 2.74
231 232 4.021229 TCTTGTATCCGTGATGGTGTAGT 58.979 43.478 0.00 0.00 39.52 2.73
232 233 3.793797 TGTATCCGTGATGGTGTAGTG 57.206 47.619 0.00 0.00 39.52 2.74
233 234 2.429250 TGTATCCGTGATGGTGTAGTGG 59.571 50.000 0.00 0.00 39.52 4.00
234 235 0.178068 ATCCGTGATGGTGTAGTGGC 59.822 55.000 0.00 0.00 39.52 5.01
235 236 1.188871 TCCGTGATGGTGTAGTGGCA 61.189 55.000 0.00 0.00 39.52 4.92
236 237 0.740868 CCGTGATGGTGTAGTGGCAG 60.741 60.000 0.00 0.00 0.00 4.85
237 238 0.740868 CGTGATGGTGTAGTGGCAGG 60.741 60.000 0.00 0.00 0.00 4.85
238 239 0.324943 GTGATGGTGTAGTGGCAGGT 59.675 55.000 0.00 0.00 0.00 4.00
239 240 1.553248 GTGATGGTGTAGTGGCAGGTA 59.447 52.381 0.00 0.00 0.00 3.08
240 241 1.831106 TGATGGTGTAGTGGCAGGTAG 59.169 52.381 0.00 0.00 0.00 3.18
241 242 1.831736 GATGGTGTAGTGGCAGGTAGT 59.168 52.381 0.00 0.00 0.00 2.73
242 243 0.973632 TGGTGTAGTGGCAGGTAGTG 59.026 55.000 0.00 0.00 0.00 2.74
258 259 7.891183 CAGGTAGTGCCACATACTAATTATC 57.109 40.000 0.00 0.00 40.61 1.75
259 260 7.441836 CAGGTAGTGCCACATACTAATTATCA 58.558 38.462 0.00 0.00 40.61 2.15
260 261 7.931407 CAGGTAGTGCCACATACTAATTATCAA 59.069 37.037 0.00 0.00 40.61 2.57
261 262 8.660435 AGGTAGTGCCACATACTAATTATCAAT 58.340 33.333 0.00 0.00 40.61 2.57
262 263 9.938280 GGTAGTGCCACATACTAATTATCAATA 57.062 33.333 0.00 0.00 37.17 1.90
265 266 9.507329 AGTGCCACATACTAATTATCAATAAGG 57.493 33.333 0.00 0.00 0.00 2.69
266 267 8.237267 GTGCCACATACTAATTATCAATAAGGC 58.763 37.037 0.00 0.00 35.58 4.35
267 268 7.941790 TGCCACATACTAATTATCAATAAGGCA 59.058 33.333 0.00 0.00 41.98 4.75
268 269 8.454106 GCCACATACTAATTATCAATAAGGCAG 58.546 37.037 0.00 0.00 35.15 4.85
269 270 8.454106 CCACATACTAATTATCAATAAGGCAGC 58.546 37.037 0.00 0.00 0.00 5.25
270 271 9.002600 CACATACTAATTATCAATAAGGCAGCA 57.997 33.333 0.00 0.00 0.00 4.41
271 272 9.745018 ACATACTAATTATCAATAAGGCAGCAT 57.255 29.630 0.00 0.00 0.00 3.79
275 276 9.971922 ACTAATTATCAATAAGGCAGCATTTTC 57.028 29.630 0.00 0.00 0.00 2.29
276 277 9.415544 CTAATTATCAATAAGGCAGCATTTTCC 57.584 33.333 0.00 0.00 0.00 3.13
277 278 7.607615 ATTATCAATAAGGCAGCATTTTCCT 57.392 32.000 0.00 0.00 0.00 3.36
278 279 4.989279 TCAATAAGGCAGCATTTTCCTC 57.011 40.909 0.00 0.00 0.00 3.71
279 280 4.603131 TCAATAAGGCAGCATTTTCCTCT 58.397 39.130 0.00 0.00 0.00 3.69
280 281 5.754782 TCAATAAGGCAGCATTTTCCTCTA 58.245 37.500 0.00 0.00 0.00 2.43
281 282 6.186957 TCAATAAGGCAGCATTTTCCTCTAA 58.813 36.000 0.00 0.00 0.00 2.10
282 283 6.663093 TCAATAAGGCAGCATTTTCCTCTAAA 59.337 34.615 0.00 0.00 0.00 1.85
283 284 7.178274 TCAATAAGGCAGCATTTTCCTCTAAAA 59.822 33.333 0.00 0.00 41.21 1.52
284 285 5.806654 AAGGCAGCATTTTCCTCTAAAAA 57.193 34.783 0.00 0.00 40.37 1.94
387 412 1.951602 CCATGGACATGCGTGATTCAT 59.048 47.619 14.17 9.84 37.49 2.57
389 414 1.667236 TGGACATGCGTGATTCATCC 58.333 50.000 14.17 9.22 0.00 3.51
390 415 0.583438 GGACATGCGTGATTCATCCG 59.417 55.000 14.17 0.00 0.00 4.18
391 416 1.290203 GACATGCGTGATTCATCCGT 58.710 50.000 14.17 0.00 0.00 4.69
392 417 1.004610 GACATGCGTGATTCATCCGTG 60.005 52.381 14.17 0.00 0.00 4.94
393 418 1.289276 CATGCGTGATTCATCCGTGA 58.711 50.000 0.00 0.00 0.00 4.35
394 419 1.004610 CATGCGTGATTCATCCGTGAC 60.005 52.381 0.00 0.00 33.11 3.67
395 420 0.739462 TGCGTGATTCATCCGTGACC 60.739 55.000 0.00 0.00 33.11 4.02
396 421 1.752501 GCGTGATTCATCCGTGACCG 61.753 60.000 0.00 0.00 33.11 4.79
397 422 0.179148 CGTGATTCATCCGTGACCGA 60.179 55.000 0.00 0.00 33.11 4.69
398 423 1.560923 GTGATTCATCCGTGACCGAG 58.439 55.000 0.00 0.00 33.11 4.63
399 424 0.179111 TGATTCATCCGTGACCGAGC 60.179 55.000 0.00 0.00 33.11 5.03
400 425 0.179111 GATTCATCCGTGACCGAGCA 60.179 55.000 0.00 0.00 33.11 4.26
401 426 0.249120 ATTCATCCGTGACCGAGCAA 59.751 50.000 0.00 0.00 33.11 3.91
402 427 0.389817 TTCATCCGTGACCGAGCAAG 60.390 55.000 0.00 0.00 33.11 4.01
403 428 2.125512 ATCCGTGACCGAGCAAGC 60.126 61.111 0.00 0.00 35.63 4.01
404 429 2.942796 ATCCGTGACCGAGCAAGCA 61.943 57.895 0.00 0.00 35.63 3.91
405 430 2.449031 ATCCGTGACCGAGCAAGCAA 62.449 55.000 0.00 0.00 35.63 3.91
406 431 2.034879 CCGTGACCGAGCAAGCAAT 61.035 57.895 0.00 0.00 35.63 3.56
407 432 1.577328 CCGTGACCGAGCAAGCAATT 61.577 55.000 0.00 0.00 35.63 2.32
408 433 0.238289 CGTGACCGAGCAAGCAATTT 59.762 50.000 0.00 0.00 35.63 1.82
409 434 1.725931 CGTGACCGAGCAAGCAATTTC 60.726 52.381 0.00 0.00 35.63 2.17
410 435 1.266718 GTGACCGAGCAAGCAATTTCA 59.733 47.619 0.00 0.00 0.00 2.69
411 436 1.536766 TGACCGAGCAAGCAATTTCAG 59.463 47.619 0.00 0.00 0.00 3.02
412 437 0.242017 ACCGAGCAAGCAATTTCAGC 59.758 50.000 0.00 0.00 0.00 4.26
413 438 0.241749 CCGAGCAAGCAATTTCAGCA 59.758 50.000 0.00 0.00 0.00 4.41
414 439 1.334054 CGAGCAAGCAATTTCAGCAC 58.666 50.000 0.00 0.00 0.00 4.40
415 440 1.335233 CGAGCAAGCAATTTCAGCACA 60.335 47.619 0.00 0.00 0.00 4.57
702 727 4.023279 CCATCACATCGAAAAAGAACCACA 60.023 41.667 0.00 0.00 0.00 4.17
703 728 4.811555 TCACATCGAAAAAGAACCACAG 57.188 40.909 0.00 0.00 0.00 3.66
763 788 6.507023 CATGGTCCTGGCAGAATTATTTTAC 58.493 40.000 17.94 0.00 0.00 2.01
898 4162 1.737735 CTCGCAGGTGCATCGACAA 60.738 57.895 2.33 0.00 42.21 3.18
970 4234 2.094390 ACCATGCAATGCAACATCTCAC 60.094 45.455 13.45 0.00 44.97 3.51
980 4244 3.019564 GCAACATCTCACTTGGGCTTAT 58.980 45.455 0.00 0.00 0.00 1.73
989 4253 2.102588 CACTTGGGCTTATAGCTACCGT 59.897 50.000 0.00 0.00 41.99 4.83
997 4261 3.305403 GCTTATAGCTACCGTGATGCAGA 60.305 47.826 0.00 0.00 38.45 4.26
999 4263 2.800881 TAGCTACCGTGATGCAGATG 57.199 50.000 0.00 0.00 0.00 2.90
1015 4279 5.906073 TGCAGATGCTATATATACGCATGT 58.094 37.500 23.11 19.09 43.77 3.21
1021 4285 4.142026 TGCTATATATACGCATGTCCACCC 60.142 45.833 10.83 0.00 0.00 4.61
1023 4287 1.729586 ATATACGCATGTCCACCCCT 58.270 50.000 0.00 0.00 0.00 4.79
1042 4306 2.417924 CCTTGGAACGTCTCATCCTCAG 60.418 54.545 5.64 2.19 36.64 3.35
1072 7620 2.719046 CCAAGTTCATTCGTTCGTTTGC 59.281 45.455 0.00 0.00 0.00 3.68
1094 7663 1.135859 CAGCAGCCAACAAGAATCGAC 60.136 52.381 0.00 0.00 0.00 4.20
1127 7699 5.561919 CGATCGAGTGATAGAAGAGGGAAAG 60.562 48.000 10.26 0.00 34.09 2.62
1139 7711 0.701147 AGGGAAAGGCAAGCTAGCTT 59.299 50.000 24.42 24.42 36.60 3.74
1171 7743 2.597510 GGCGGGAAGGTTTGCTGT 60.598 61.111 0.00 0.00 0.00 4.40
1193 7765 2.482316 CGTGCCGGTAATGTTCCTGATA 60.482 50.000 1.90 0.00 0.00 2.15
1301 7873 2.980233 GTGGCGGTGCAGCTTCTT 60.980 61.111 14.92 0.00 37.29 2.52
1323 7895 1.586154 GCAAATGTACCTGCAGCGGT 61.586 55.000 8.66 5.39 41.10 5.68
1388 8003 1.908793 CCCACACTGACCGAGACCT 60.909 63.158 0.00 0.00 0.00 3.85
1408 8023 4.396790 ACCTCAGACGAAATCTACTCAGAC 59.603 45.833 0.00 0.00 35.15 3.51
1413 8028 5.746245 CAGACGAAATCTACTCAGACAATCC 59.254 44.000 0.00 0.00 35.15 3.01
1414 8029 5.419155 AGACGAAATCTACTCAGACAATCCA 59.581 40.000 0.00 0.00 35.15 3.41
1415 8030 5.411781 ACGAAATCTACTCAGACAATCCAC 58.588 41.667 0.00 0.00 32.25 4.02
1416 8031 4.500837 CGAAATCTACTCAGACAATCCACG 59.499 45.833 0.00 0.00 32.25 4.94
1478 8093 1.145759 TTTCAGCCGTCGCGATCATC 61.146 55.000 14.06 0.00 41.18 2.92
1481 8096 1.372251 AGCCGTCGCGATCATCATC 60.372 57.895 14.06 0.00 41.18 2.92
1489 8104 1.368950 CGATCATCATCCGTGGCCT 59.631 57.895 3.32 0.00 0.00 5.19
1509 8124 2.036992 CTCCAGGCCAGCTCTTATGTAG 59.963 54.545 5.01 0.00 0.00 2.74
1510 8125 1.071385 CCAGGCCAGCTCTTATGTAGG 59.929 57.143 5.01 0.00 0.00 3.18
1511 8126 2.042464 CAGGCCAGCTCTTATGTAGGA 58.958 52.381 5.01 0.00 0.00 2.94
1512 8127 2.036992 CAGGCCAGCTCTTATGTAGGAG 59.963 54.545 5.01 0.00 33.07 3.69
1513 8128 2.043227 GGCCAGCTCTTATGTAGGAGT 58.957 52.381 0.00 0.00 32.57 3.85
1514 8129 3.117093 AGGCCAGCTCTTATGTAGGAGTA 60.117 47.826 5.01 0.00 32.57 2.59
1515 8130 3.835395 GGCCAGCTCTTATGTAGGAGTAT 59.165 47.826 0.00 0.00 32.57 2.12
1516 8131 4.284746 GGCCAGCTCTTATGTAGGAGTATT 59.715 45.833 0.00 0.00 32.57 1.89
1517 8132 5.221742 GGCCAGCTCTTATGTAGGAGTATTT 60.222 44.000 0.00 0.00 32.57 1.40
1518 8133 6.014499 GGCCAGCTCTTATGTAGGAGTATTTA 60.014 42.308 0.00 0.00 32.57 1.40
1549 8178 1.305201 TTGGGTGTTCTTTCTGTCGC 58.695 50.000 0.00 0.00 0.00 5.19
1561 8190 7.040892 TGTTCTTTCTGTCGCTAAGTTCTAGTA 60.041 37.037 0.00 0.00 0.00 1.82
1597 8226 9.185192 CTCAAAATACCTGTTGTTCATTCTTTC 57.815 33.333 0.00 0.00 0.00 2.62
1660 8295 5.815850 TGTTTTAGCATGCATATTGGTACG 58.184 37.500 21.98 0.00 0.00 3.67
1675 8310 1.403780 GGTACGTCACACCATGTCTCC 60.404 57.143 0.00 0.00 36.01 3.71
1676 8311 1.544691 GTACGTCACACCATGTCTCCT 59.455 52.381 0.00 0.00 0.00 3.69
1677 8312 1.919240 ACGTCACACCATGTCTCCTA 58.081 50.000 0.00 0.00 0.00 2.94
1678 8313 2.457598 ACGTCACACCATGTCTCCTAT 58.542 47.619 0.00 0.00 0.00 2.57
1679 8314 3.628008 ACGTCACACCATGTCTCCTATA 58.372 45.455 0.00 0.00 0.00 1.31
1680 8315 4.215908 ACGTCACACCATGTCTCCTATAT 58.784 43.478 0.00 0.00 0.00 0.86
1720 8355 6.144402 ACAACGCAATAATTTTGCTGAAAGAG 59.856 34.615 17.37 7.59 42.87 2.85
1727 8362 5.859205 AATTTTGCTGAAAGAGAACACCT 57.141 34.783 0.00 0.00 34.07 4.00
1771 8406 3.214328 CTCATGCCCACAATAACCCTAC 58.786 50.000 0.00 0.00 0.00 3.18
1772 8407 2.578480 TCATGCCCACAATAACCCTACA 59.422 45.455 0.00 0.00 0.00 2.74
1774 8409 3.527507 TGCCCACAATAACCCTACAAA 57.472 42.857 0.00 0.00 0.00 2.83
1781 8416 6.317893 CCCACAATAACCCTACAAACATCTAC 59.682 42.308 0.00 0.00 0.00 2.59
1782 8417 6.882140 CCACAATAACCCTACAAACATCTACA 59.118 38.462 0.00 0.00 0.00 2.74
1783 8418 7.392113 CCACAATAACCCTACAAACATCTACAA 59.608 37.037 0.00 0.00 0.00 2.41
1784 8419 8.956426 CACAATAACCCTACAAACATCTACAAT 58.044 33.333 0.00 0.00 0.00 2.71
1785 8420 9.174166 ACAATAACCCTACAAACATCTACAATC 57.826 33.333 0.00 0.00 0.00 2.67
1793 8428 4.223032 ACAAACATCTACAATCGGACTCCT 59.777 41.667 0.00 0.00 0.00 3.69
1799 8434 2.080286 ACAATCGGACTCCTCAAACG 57.920 50.000 0.00 0.00 0.00 3.60
1800 8435 1.343465 ACAATCGGACTCCTCAAACGT 59.657 47.619 0.00 0.00 0.00 3.99
1804 8439 1.533469 CGGACTCCTCAAACGTCCCT 61.533 60.000 0.00 0.00 43.30 4.20
1810 8445 2.947652 CTCCTCAAACGTCCCTATACGA 59.052 50.000 3.10 0.00 45.68 3.43
1812 8447 3.956199 TCCTCAAACGTCCCTATACGATT 59.044 43.478 3.10 0.00 45.68 3.34
1813 8448 4.403432 TCCTCAAACGTCCCTATACGATTT 59.597 41.667 3.10 0.00 45.68 2.17
1814 8449 5.593909 TCCTCAAACGTCCCTATACGATTTA 59.406 40.000 3.10 0.00 45.68 1.40
1816 8451 6.238842 CCTCAAACGTCCCTATACGATTTAGA 60.239 42.308 3.10 0.00 45.68 2.10
1817 8452 7.281040 TCAAACGTCCCTATACGATTTAGAT 57.719 36.000 3.10 0.00 45.68 1.98
1819 8454 5.640189 ACGTCCCTATACGATTTAGATGG 57.360 43.478 3.10 0.00 45.68 3.51
1820 8455 5.319453 ACGTCCCTATACGATTTAGATGGA 58.681 41.667 3.10 0.00 45.68 3.41
1821 8456 5.182760 ACGTCCCTATACGATTTAGATGGAC 59.817 44.000 3.10 0.00 45.68 4.02
1824 8459 4.421948 CCTATACGATTTAGATGGACGGC 58.578 47.826 0.00 0.00 0.00 5.68
1827 8462 1.202533 ACGATTTAGATGGACGGCCTG 60.203 52.381 9.82 0.00 34.31 4.85
1828 8463 1.068588 CGATTTAGATGGACGGCCTGA 59.931 52.381 9.82 0.00 34.31 3.86
1829 8464 2.289072 CGATTTAGATGGACGGCCTGAT 60.289 50.000 9.82 0.00 34.31 2.90
1830 8465 3.744660 GATTTAGATGGACGGCCTGATT 58.255 45.455 9.82 0.00 34.31 2.57
1831 8466 4.560716 CGATTTAGATGGACGGCCTGATTA 60.561 45.833 9.82 0.00 34.31 1.75
1832 8467 4.764050 TTTAGATGGACGGCCTGATTAA 57.236 40.909 9.82 0.00 34.31 1.40
1833 8468 4.974645 TTAGATGGACGGCCTGATTAAT 57.025 40.909 9.82 0.00 34.31 1.40
1834 8469 3.131709 AGATGGACGGCCTGATTAATG 57.868 47.619 9.82 0.00 34.31 1.90
1835 8470 2.705658 AGATGGACGGCCTGATTAATGA 59.294 45.455 9.82 0.00 34.31 2.57
1836 8471 2.325583 TGGACGGCCTGATTAATGAC 57.674 50.000 9.82 0.00 34.31 3.06
1841 8476 1.594331 GGCCTGATTAATGACCGGTC 58.406 55.000 28.17 28.17 0.00 4.79
1851 8486 3.915437 AATGACCGGTCACAAAATCAC 57.085 42.857 38.46 7.60 43.11 3.06
1852 8487 2.333688 TGACCGGTCACAAAATCACA 57.666 45.000 33.23 7.23 34.14 3.58
1854 8489 3.017442 TGACCGGTCACAAAATCACAAA 58.983 40.909 33.23 5.69 34.14 2.83
1859 8494 3.796178 CGGTCACAAAATCACAAACCAAG 59.204 43.478 0.00 0.00 0.00 3.61
1876 8511 0.530744 AAGCGCACTCTTCATACCGA 59.469 50.000 11.47 0.00 0.00 4.69
1879 8514 1.772182 CGCACTCTTCATACCGATCC 58.228 55.000 0.00 0.00 0.00 3.36
1880 8515 1.338337 CGCACTCTTCATACCGATCCT 59.662 52.381 0.00 0.00 0.00 3.24
1887 8522 3.562973 TCTTCATACCGATCCTGTACGTC 59.437 47.826 0.00 0.00 0.00 4.34
1889 8524 4.341366 TCATACCGATCCTGTACGTCTA 57.659 45.455 0.00 0.00 0.00 2.59
1897 8532 2.648059 TCCTGTACGTCTAGGCTAACC 58.352 52.381 12.01 0.00 34.00 2.85
1899 8534 2.283298 CTGTACGTCTAGGCTAACCGA 58.717 52.381 16.51 0.00 42.76 4.69
1901 8536 2.284190 GTACGTCTAGGCTAACCGACT 58.716 52.381 16.51 5.14 42.76 4.18
1902 8537 1.377536 ACGTCTAGGCTAACCGACTC 58.622 55.000 16.51 0.00 42.76 3.36
1917 8552 1.967066 CGACTCCCTTGATATCCAGCT 59.033 52.381 0.00 0.00 0.00 4.24
1918 8553 2.029470 CGACTCCCTTGATATCCAGCTC 60.029 54.545 0.00 0.00 0.00 4.09
1920 8555 3.582208 GACTCCCTTGATATCCAGCTCAT 59.418 47.826 0.00 0.00 0.00 2.90
1923 8558 5.789575 ACTCCCTTGATATCCAGCTCATATT 59.210 40.000 0.00 0.00 0.00 1.28
1944 8579 4.487714 TTGGAGCGAATATGGAGAAGTT 57.512 40.909 0.00 0.00 0.00 2.66
1945 8580 3.797039 TGGAGCGAATATGGAGAAGTTG 58.203 45.455 0.00 0.00 0.00 3.16
1951 8586 3.871594 CGAATATGGAGAAGTTGGGACAC 59.128 47.826 0.00 0.00 39.29 3.67
1964 8599 1.593265 GGACACATCCGGGTACGTT 59.407 57.895 0.00 0.00 38.78 3.99
1965 8600 0.459063 GGACACATCCGGGTACGTTC 60.459 60.000 0.00 0.00 38.78 3.95
1967 8602 1.213537 CACATCCGGGTACGTTCGT 59.786 57.895 0.00 2.91 38.78 3.85
1971 8606 1.243342 ATCCGGGTACGTTCGTCACA 61.243 55.000 0.00 0.00 38.78 3.58
1972 8607 1.213537 CCGGGTACGTTCGTCACAT 59.786 57.895 0.00 0.00 38.78 3.21
1974 8609 1.129879 CGGGTACGTTCGTCACATCG 61.130 60.000 0.00 4.19 34.81 3.84
1981 8616 1.202143 CGTTCGTCACATCGGATCAGA 60.202 52.381 0.00 0.00 0.00 3.27
1983 8618 1.459450 TCGTCACATCGGATCAGACA 58.541 50.000 15.53 4.74 0.00 3.41
1991 8626 0.733150 TCGGATCAGACACACGCTAG 59.267 55.000 0.00 0.00 0.00 3.42
1994 8629 0.528684 GATCAGACACACGCTAGCCC 60.529 60.000 9.66 0.00 0.00 5.19
1996 8631 1.219124 CAGACACACGCTAGCCCAT 59.781 57.895 9.66 0.00 0.00 4.00
1997 8632 0.391661 CAGACACACGCTAGCCCATT 60.392 55.000 9.66 0.00 0.00 3.16
1999 8634 0.447801 GACACACGCTAGCCCATTTG 59.552 55.000 9.66 1.11 0.00 2.32
2015 8650 4.458989 CCCATTTGACCCCACATATATTCG 59.541 45.833 0.00 0.00 0.00 3.34
2016 8651 4.082787 CCATTTGACCCCACATATATTCGC 60.083 45.833 0.00 0.00 0.00 4.70
2017 8652 2.851263 TGACCCCACATATATTCGCC 57.149 50.000 0.00 0.00 0.00 5.54
2026 8661 3.046374 ACATATATTCGCCCCCTATCCC 58.954 50.000 0.00 0.00 0.00 3.85
2052 8687 1.006571 GACGAAACTGGAGGACGCA 60.007 57.895 0.00 0.00 0.00 5.24
2054 8689 0.034896 ACGAAACTGGAGGACGCAAT 59.965 50.000 0.00 0.00 0.00 3.56
2059 8694 2.046023 TGGAGGACGCAATGCCAG 60.046 61.111 0.00 0.00 0.00 4.85
2062 8697 1.162800 GGAGGACGCAATGCCAGATC 61.163 60.000 0.00 0.00 0.00 2.75
2074 8709 1.293179 CCAGATCGTGGTGACTGCA 59.707 57.895 3.72 0.00 42.17 4.41
2077 8712 2.046892 ATCGTGGTGACTGCAGCC 60.047 61.111 15.27 7.86 41.74 4.85
2080 8715 2.740055 GTGGTGACTGCAGCCTCG 60.740 66.667 15.27 0.00 41.74 4.63
2118 8753 4.431131 CTGGCGCCCCAACTCCAT 62.431 66.667 26.77 0.00 41.58 3.41
2119 8754 3.012119 TGGCGCCCCAACTCCATA 61.012 61.111 26.77 0.00 38.46 2.74
2125 8760 0.618458 GCCCCAACTCCATAGTGACA 59.382 55.000 0.00 0.00 35.62 3.58
2126 8761 1.004277 GCCCCAACTCCATAGTGACAA 59.996 52.381 0.00 0.00 35.62 3.18
2157 8792 4.803426 GTGGCGCCTCGTCTCTGG 62.803 72.222 29.70 0.00 30.55 3.86
2167 8802 4.554036 GTCTCTGGGGCATCGGGC 62.554 72.222 0.00 0.00 43.74 6.13
2169 8804 4.247380 CTCTGGGGCATCGGGCTC 62.247 72.222 0.23 0.00 44.66 4.70
2188 8823 0.526662 CCGAGTAAGAGGTCAACGCT 59.473 55.000 0.00 0.00 0.00 5.07
2190 8825 2.358267 CCGAGTAAGAGGTCAACGCTAT 59.642 50.000 0.00 0.00 0.00 2.97
2194 8829 4.938080 AGTAAGAGGTCAACGCTATCATG 58.062 43.478 0.00 0.00 0.00 3.07
2195 8830 2.231215 AGAGGTCAACGCTATCATGC 57.769 50.000 0.00 0.00 0.00 4.06
2204 8839 3.814049 GCTATCATGCGTCACAAGC 57.186 52.632 0.00 0.00 0.00 4.01
2205 8840 0.305922 GCTATCATGCGTCACAAGCC 59.694 55.000 0.00 0.00 0.00 4.35
2228 8863 4.201679 CTGGGGACGCGCGACATA 62.202 66.667 39.36 18.41 0.00 2.29
2237 8872 2.883730 CGCGACATACCCACCGTG 60.884 66.667 0.00 0.00 0.00 4.94
2238 8873 2.263540 GCGACATACCCACCGTGT 59.736 61.111 0.00 0.00 0.00 4.49
2242 8877 0.892755 GACATACCCACCGTGTGAGA 59.107 55.000 5.71 0.00 37.07 3.27
2247 8882 0.895530 ACCCACCGTGTGAGACATAG 59.104 55.000 5.71 0.00 35.23 2.23
2253 8888 0.246360 CGTGTGAGACATAGGGTGCA 59.754 55.000 0.00 0.00 0.00 4.57
2254 8889 1.737029 CGTGTGAGACATAGGGTGCAG 60.737 57.143 0.00 0.00 0.00 4.41
2266 8901 2.031163 GTGCAGGAAGCCACGACT 59.969 61.111 0.00 0.00 44.83 4.18
2267 8902 1.292223 GTGCAGGAAGCCACGACTA 59.708 57.895 0.00 0.00 44.83 2.59
2268 8903 1.014564 GTGCAGGAAGCCACGACTAC 61.015 60.000 0.00 0.00 44.83 2.73
2272 8907 0.971447 AGGAAGCCACGACTACCCTC 60.971 60.000 0.00 0.00 0.00 4.30
2303 8938 1.148273 GTGGAGGTGGAGTTGCACA 59.852 57.895 6.12 0.00 35.93 4.57
2311 8946 2.193536 GGAGTTGCACACCGCCTTT 61.194 57.895 0.00 0.00 41.33 3.11
2313 8948 1.444119 GAGTTGCACACCGCCTTTGA 61.444 55.000 0.00 0.00 41.33 2.69
2357 8992 1.774254 TCCTCAAGAAGTGGCAAAGGA 59.226 47.619 0.00 0.00 0.00 3.36
2358 8993 2.157738 CCTCAAGAAGTGGCAAAGGAG 58.842 52.381 0.00 0.00 0.00 3.69
2361 8996 2.376518 TCAAGAAGTGGCAAAGGAGGAT 59.623 45.455 0.00 0.00 0.00 3.24
2366 9001 1.637553 AGTGGCAAAGGAGGATGACAT 59.362 47.619 0.00 0.00 36.84 3.06
2369 9004 1.466856 GCAAAGGAGGATGACATGCA 58.533 50.000 9.80 0.00 32.80 3.96
2375 9010 0.835941 GAGGATGACATGCACCCTCT 59.164 55.000 18.32 0.22 40.07 3.69
2377 9012 0.179034 GGATGACATGCACCCTCTCC 60.179 60.000 1.50 0.00 0.00 3.71
2378 9013 0.179034 GATGACATGCACCCTCTCCC 60.179 60.000 0.00 0.00 0.00 4.30
2409 9044 2.421739 GGCGGTCCATGCTATCGT 59.578 61.111 1.62 0.00 0.00 3.73
2420 9055 0.750546 TGCTATCGTCGTACTGCCCT 60.751 55.000 0.00 0.00 0.00 5.19
2426 9061 1.380112 GTCGTACTGCCCTCTCCCT 60.380 63.158 0.00 0.00 0.00 4.20
2427 9062 1.076923 TCGTACTGCCCTCTCCCTC 60.077 63.158 0.00 0.00 0.00 4.30
2428 9063 2.128507 CGTACTGCCCTCTCCCTCC 61.129 68.421 0.00 0.00 0.00 4.30
2429 9064 1.762858 GTACTGCCCTCTCCCTCCC 60.763 68.421 0.00 0.00 0.00 4.30
2430 9065 3.023045 TACTGCCCTCTCCCTCCCC 62.023 68.421 0.00 0.00 0.00 4.81
2433 9068 4.890306 GCCCTCTCCCTCCCCCTC 62.890 77.778 0.00 0.00 0.00 4.30
2434 9069 4.179599 CCCTCTCCCTCCCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
2435 9070 4.179599 CCTCTCCCTCCCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
2436 9071 4.179599 CTCTCCCTCCCCCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
2456 9091 0.043334 CTCCCCCAAGAGAAGGAGGA 59.957 60.000 0.00 0.00 41.90 3.71
2460 9095 0.254462 CCCAAGAGAAGGAGGAAGCC 59.746 60.000 0.00 0.00 0.00 4.35
2468 9103 1.831652 AAGGAGGAAGCCAGTGACGG 61.832 60.000 0.00 0.00 0.00 4.79
2471 9106 2.047179 GGAAGCCAGTGACGGGTC 60.047 66.667 3.24 0.00 35.11 4.46
2480 9115 1.120530 AGTGACGGGTCAGACAACTT 58.879 50.000 0.94 0.00 40.75 2.66
2481 9116 1.485066 AGTGACGGGTCAGACAACTTT 59.515 47.619 0.94 0.00 40.75 2.66
2482 9117 1.597663 GTGACGGGTCAGACAACTTTG 59.402 52.381 0.94 0.00 40.75 2.77
2483 9118 1.483004 TGACGGGTCAGACAACTTTGA 59.517 47.619 2.17 0.00 34.14 2.69
2484 9119 1.865340 GACGGGTCAGACAACTTTGAC 59.135 52.381 2.17 0.00 42.25 3.18
2493 9128 3.002042 CAGACAACTTTGACAGTGAGCAG 59.998 47.826 0.00 0.00 35.12 4.24
2500 9135 0.900182 TGACAGTGAGCAGATCCGGT 60.900 55.000 0.00 0.00 0.00 5.28
2507 9142 0.319125 GAGCAGATCCGGTTCGATCC 60.319 60.000 0.00 2.15 39.67 3.36
2513 9148 3.248602 CAGATCCGGTTCGATCCATTTTC 59.751 47.826 12.88 4.04 39.67 2.29
2518 9153 2.351726 CGGTTCGATCCATTTTCTGTCC 59.648 50.000 12.88 0.00 0.00 4.02
2527 9162 3.074390 TCCATTTTCTGTCCATGACCACT 59.926 43.478 0.00 0.00 0.00 4.00
2534 9169 2.834549 CTGTCCATGACCACTACTTCCT 59.165 50.000 0.00 0.00 0.00 3.36
2537 9172 1.137086 CCATGACCACTACTTCCTCCG 59.863 57.143 0.00 0.00 0.00 4.63
2540 9175 1.891150 TGACCACTACTTCCTCCGAAC 59.109 52.381 0.00 0.00 0.00 3.95
2556 9191 1.557443 GAACACGGCAAGGTCGACAG 61.557 60.000 18.91 7.70 33.65 3.51
2561 9196 1.361668 CGGCAAGGTCGACAGGAATG 61.362 60.000 18.91 9.13 29.41 2.67
2565 9200 2.614481 GCAAGGTCGACAGGAATGGTAA 60.614 50.000 18.91 0.00 0.00 2.85
2569 9204 0.539986 TCGACAGGAATGGTAAGGGC 59.460 55.000 0.00 0.00 0.00 5.19
2573 9208 0.257039 CAGGAATGGTAAGGGCAGCT 59.743 55.000 0.00 0.00 0.00 4.24
2597 9232 8.184192 GCTGTGCATGAACTTTATACATAGTTT 58.816 33.333 5.18 0.00 34.88 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.258708 GCTAATCATATAATACTCCCTCCGTTT 58.741 37.037 0.00 0.00 0.00 3.60
3 4 7.399191 TGCTAATCATATAATACTCCCTCCGTT 59.601 37.037 0.00 0.00 0.00 4.44
4 5 6.895756 TGCTAATCATATAATACTCCCTCCGT 59.104 38.462 0.00 0.00 0.00 4.69
5 6 7.068839 AGTGCTAATCATATAATACTCCCTCCG 59.931 40.741 0.00 0.00 0.00 4.63
6 7 8.312669 AGTGCTAATCATATAATACTCCCTCC 57.687 38.462 0.00 0.00 0.00 4.30
46 47 8.388103 GCTCAACACGTTTATCATGTAGTTAAT 58.612 33.333 0.00 0.00 0.00 1.40
47 48 7.411049 CGCTCAACACGTTTATCATGTAGTTAA 60.411 37.037 0.00 0.00 0.00 2.01
48 49 6.034150 CGCTCAACACGTTTATCATGTAGTTA 59.966 38.462 0.00 0.00 0.00 2.24
49 50 5.163992 CGCTCAACACGTTTATCATGTAGTT 60.164 40.000 0.00 0.00 0.00 2.24
50 51 4.326278 CGCTCAACACGTTTATCATGTAGT 59.674 41.667 0.00 0.00 0.00 2.73
51 52 4.779082 GCGCTCAACACGTTTATCATGTAG 60.779 45.833 0.00 0.00 0.00 2.74
52 53 3.061563 GCGCTCAACACGTTTATCATGTA 59.938 43.478 0.00 0.00 0.00 2.29
53 54 2.159707 GCGCTCAACACGTTTATCATGT 60.160 45.455 0.00 0.00 0.00 3.21
54 55 2.094258 AGCGCTCAACACGTTTATCATG 59.906 45.455 2.64 0.00 0.00 3.07
55 56 2.346803 AGCGCTCAACACGTTTATCAT 58.653 42.857 2.64 0.00 0.00 2.45
56 57 1.724623 GAGCGCTCAACACGTTTATCA 59.275 47.619 31.91 0.00 0.00 2.15
57 58 1.266404 CGAGCGCTCAACACGTTTATC 60.266 52.381 34.69 6.30 0.00 1.75
58 59 0.713883 CGAGCGCTCAACACGTTTAT 59.286 50.000 34.69 0.00 0.00 1.40
59 60 0.318022 TCGAGCGCTCAACACGTTTA 60.318 50.000 34.69 4.78 0.00 2.01
60 61 1.590525 TCGAGCGCTCAACACGTTT 60.591 52.632 34.69 0.00 0.00 3.60
61 62 2.027024 TCGAGCGCTCAACACGTT 59.973 55.556 34.69 0.00 0.00 3.99
62 63 2.729862 GTCGAGCGCTCAACACGT 60.730 61.111 34.69 0.00 0.00 4.49
63 64 1.617755 AATGTCGAGCGCTCAACACG 61.618 55.000 31.93 20.44 0.00 4.49
64 65 0.179240 CAATGTCGAGCGCTCAACAC 60.179 55.000 31.93 24.81 0.00 3.32
65 66 0.319469 TCAATGTCGAGCGCTCAACA 60.319 50.000 31.47 31.47 0.00 3.33
66 67 0.790207 TTCAATGTCGAGCGCTCAAC 59.210 50.000 34.69 28.50 0.00 3.18
67 68 1.507562 TTTCAATGTCGAGCGCTCAA 58.492 45.000 34.69 17.41 0.00 3.02
68 69 1.725641 ATTTCAATGTCGAGCGCTCA 58.274 45.000 34.69 18.66 0.00 4.26
69 70 2.348032 GCTATTTCAATGTCGAGCGCTC 60.348 50.000 27.64 27.64 0.00 5.03
70 71 1.594862 GCTATTTCAATGTCGAGCGCT 59.405 47.619 11.27 11.27 0.00 5.92
71 72 1.654775 CGCTATTTCAATGTCGAGCGC 60.655 52.381 0.00 0.00 45.12 5.92
72 73 2.270202 CGCTATTTCAATGTCGAGCG 57.730 50.000 0.00 0.00 45.58 5.03
73 74 3.182572 CCTACGCTATTTCAATGTCGAGC 59.817 47.826 0.00 0.00 0.00 5.03
74 75 4.360563 ACCTACGCTATTTCAATGTCGAG 58.639 43.478 0.00 0.00 0.00 4.04
75 76 4.357142 GACCTACGCTATTTCAATGTCGA 58.643 43.478 0.00 0.00 0.00 4.20
76 77 3.179795 CGACCTACGCTATTTCAATGTCG 59.820 47.826 0.00 0.00 37.37 4.35
77 78 4.110482 ACGACCTACGCTATTTCAATGTC 58.890 43.478 0.00 0.00 46.94 3.06
78 79 4.119442 ACGACCTACGCTATTTCAATGT 57.881 40.909 0.00 0.00 46.94 2.71
79 80 4.260212 CCAACGACCTACGCTATTTCAATG 60.260 45.833 0.00 0.00 46.94 2.82
80 81 3.869246 CCAACGACCTACGCTATTTCAAT 59.131 43.478 0.00 0.00 46.94 2.57
81 82 3.056678 TCCAACGACCTACGCTATTTCAA 60.057 43.478 0.00 0.00 46.94 2.69
82 83 2.492881 TCCAACGACCTACGCTATTTCA 59.507 45.455 0.00 0.00 46.94 2.69
83 84 3.155093 TCCAACGACCTACGCTATTTC 57.845 47.619 0.00 0.00 46.94 2.17
84 85 3.814005 ATCCAACGACCTACGCTATTT 57.186 42.857 0.00 0.00 46.94 1.40
85 86 3.131577 TCAATCCAACGACCTACGCTATT 59.868 43.478 0.00 0.00 46.94 1.73
86 87 2.691526 TCAATCCAACGACCTACGCTAT 59.308 45.455 0.00 0.00 46.94 2.97
87 88 2.093890 TCAATCCAACGACCTACGCTA 58.906 47.619 0.00 0.00 46.94 4.26
88 89 0.892755 TCAATCCAACGACCTACGCT 59.107 50.000 0.00 0.00 46.94 5.07
89 90 0.997196 GTCAATCCAACGACCTACGC 59.003 55.000 0.00 0.00 46.94 4.42
91 92 3.857052 TCATGTCAATCCAACGACCTAC 58.143 45.455 0.00 0.00 0.00 3.18
92 93 4.753516 ATCATGTCAATCCAACGACCTA 57.246 40.909 0.00 0.00 0.00 3.08
93 94 3.634397 ATCATGTCAATCCAACGACCT 57.366 42.857 0.00 0.00 0.00 3.85
94 95 4.155826 TCAAATCATGTCAATCCAACGACC 59.844 41.667 0.00 0.00 0.00 4.79
95 96 5.088739 GTCAAATCATGTCAATCCAACGAC 58.911 41.667 0.00 0.00 0.00 4.34
96 97 4.142924 CGTCAAATCATGTCAATCCAACGA 60.143 41.667 0.00 0.00 0.00 3.85
97 98 4.090729 CGTCAAATCATGTCAATCCAACG 58.909 43.478 0.00 0.00 0.00 4.10
98 99 5.088739 GTCGTCAAATCATGTCAATCCAAC 58.911 41.667 0.00 0.00 0.00 3.77
99 100 4.155826 GGTCGTCAAATCATGTCAATCCAA 59.844 41.667 0.00 0.00 0.00 3.53
100 101 3.689161 GGTCGTCAAATCATGTCAATCCA 59.311 43.478 0.00 0.00 0.00 3.41
101 102 3.689161 TGGTCGTCAAATCATGTCAATCC 59.311 43.478 0.00 0.00 0.00 3.01
102 103 4.944962 TGGTCGTCAAATCATGTCAATC 57.055 40.909 0.00 0.00 0.00 2.67
103 104 5.003160 TCTTGGTCGTCAAATCATGTCAAT 58.997 37.500 0.00 0.00 34.56 2.57
104 105 4.384940 TCTTGGTCGTCAAATCATGTCAA 58.615 39.130 0.00 0.00 34.56 3.18
105 106 4.001618 TCTTGGTCGTCAAATCATGTCA 57.998 40.909 0.00 0.00 34.56 3.58
106 107 5.551760 AATCTTGGTCGTCAAATCATGTC 57.448 39.130 0.00 0.00 34.56 3.06
107 108 7.630242 ATTAATCTTGGTCGTCAAATCATGT 57.370 32.000 0.00 0.00 34.56 3.21
108 109 7.433131 CCAATTAATCTTGGTCGTCAAATCATG 59.567 37.037 0.36 0.00 40.72 3.07
109 110 7.339212 TCCAATTAATCTTGGTCGTCAAATCAT 59.661 33.333 7.54 0.00 44.99 2.45
110 111 6.657117 TCCAATTAATCTTGGTCGTCAAATCA 59.343 34.615 7.54 0.00 44.99 2.57
111 112 7.083875 TCCAATTAATCTTGGTCGTCAAATC 57.916 36.000 7.54 0.00 44.99 2.17
112 113 7.557719 AGATCCAATTAATCTTGGTCGTCAAAT 59.442 33.333 7.54 0.00 44.99 2.32
113 114 6.884295 AGATCCAATTAATCTTGGTCGTCAAA 59.116 34.615 7.54 0.00 44.99 2.69
114 115 6.316140 CAGATCCAATTAATCTTGGTCGTCAA 59.684 38.462 7.54 0.00 44.99 3.18
115 116 5.817296 CAGATCCAATTAATCTTGGTCGTCA 59.183 40.000 7.54 0.00 44.99 4.35
116 117 5.277538 GCAGATCCAATTAATCTTGGTCGTC 60.278 44.000 7.54 5.57 44.99 4.20
117 118 4.576463 GCAGATCCAATTAATCTTGGTCGT 59.424 41.667 7.54 0.00 44.99 4.34
118 119 4.023707 GGCAGATCCAATTAATCTTGGTCG 60.024 45.833 7.54 4.21 44.99 4.79
119 120 5.136105 AGGCAGATCCAATTAATCTTGGTC 58.864 41.667 7.54 5.47 44.99 4.02
120 121 5.103771 AGAGGCAGATCCAATTAATCTTGGT 60.104 40.000 7.54 0.00 44.99 3.67
121 122 5.383476 AGAGGCAGATCCAATTAATCTTGG 58.617 41.667 1.92 1.92 45.91 3.61
122 123 6.956202 AAGAGGCAGATCCAATTAATCTTG 57.044 37.500 0.81 0.00 37.29 3.02
123 124 6.323225 CCAAAGAGGCAGATCCAATTAATCTT 59.677 38.462 0.81 0.00 37.29 2.40
124 125 5.832060 CCAAAGAGGCAGATCCAATTAATCT 59.168 40.000 0.00 0.00 37.29 2.40
125 126 5.829924 TCCAAAGAGGCAGATCCAATTAATC 59.170 40.000 0.00 0.00 37.29 1.75
126 127 5.769835 TCCAAAGAGGCAGATCCAATTAAT 58.230 37.500 0.00 0.00 37.29 1.40
127 128 5.191727 TCCAAAGAGGCAGATCCAATTAA 57.808 39.130 0.00 0.00 37.29 1.40
128 129 4.860802 TCCAAAGAGGCAGATCCAATTA 57.139 40.909 0.00 0.00 37.29 1.40
129 130 3.744940 TCCAAAGAGGCAGATCCAATT 57.255 42.857 0.00 0.00 37.29 2.32
130 131 3.462579 AGATCCAAAGAGGCAGATCCAAT 59.537 43.478 0.00 0.00 36.59 3.16
131 132 2.848694 AGATCCAAAGAGGCAGATCCAA 59.151 45.455 0.00 0.00 36.59 3.53
132 133 2.485659 AGATCCAAAGAGGCAGATCCA 58.514 47.619 0.00 0.00 36.59 3.41
133 134 3.574354 AAGATCCAAAGAGGCAGATCC 57.426 47.619 0.00 0.00 36.59 3.36
134 135 5.911378 AAAAAGATCCAAAGAGGCAGATC 57.089 39.130 0.00 0.00 37.29 2.75
135 136 9.652114 AATATAAAAAGATCCAAAGAGGCAGAT 57.348 29.630 0.00 0.00 37.29 2.90
136 137 8.906867 CAATATAAAAAGATCCAAAGAGGCAGA 58.093 33.333 0.00 0.00 37.29 4.26
137 138 8.139989 CCAATATAAAAAGATCCAAAGAGGCAG 58.860 37.037 0.00 0.00 37.29 4.85
138 139 7.619302 ACCAATATAAAAAGATCCAAAGAGGCA 59.381 33.333 0.00 0.00 37.29 4.75
139 140 8.011844 ACCAATATAAAAAGATCCAAAGAGGC 57.988 34.615 0.00 0.00 37.29 4.70
179 180 8.284693 GCAAACATAAAATCAAGTTTTGCATCT 58.715 29.630 10.43 0.00 40.17 2.90
180 181 7.534918 GGCAAACATAAAATCAAGTTTTGCATC 59.465 33.333 15.65 0.00 40.17 3.91
181 182 7.361894 GGCAAACATAAAATCAAGTTTTGCAT 58.638 30.769 15.65 0.00 40.17 3.96
182 183 6.238593 GGGCAAACATAAAATCAAGTTTTGCA 60.239 34.615 15.65 0.00 40.17 4.08
183 184 6.142139 GGGCAAACATAAAATCAAGTTTTGC 58.858 36.000 7.45 7.45 40.17 3.68
184 185 6.018343 ACGGGCAAACATAAAATCAAGTTTTG 60.018 34.615 0.00 0.00 40.17 2.44
185 186 6.052360 ACGGGCAAACATAAAATCAAGTTTT 58.948 32.000 0.00 0.00 42.47 2.43
186 187 5.606505 ACGGGCAAACATAAAATCAAGTTT 58.393 33.333 0.00 0.00 34.78 2.66
187 188 5.010617 AGACGGGCAAACATAAAATCAAGTT 59.989 36.000 0.00 0.00 0.00 2.66
188 189 4.522789 AGACGGGCAAACATAAAATCAAGT 59.477 37.500 0.00 0.00 0.00 3.16
189 190 5.059404 AGACGGGCAAACATAAAATCAAG 57.941 39.130 0.00 0.00 0.00 3.02
190 191 5.221342 ACAAGACGGGCAAACATAAAATCAA 60.221 36.000 0.00 0.00 0.00 2.57
191 192 4.279671 ACAAGACGGGCAAACATAAAATCA 59.720 37.500 0.00 0.00 0.00 2.57
192 193 4.805219 ACAAGACGGGCAAACATAAAATC 58.195 39.130 0.00 0.00 0.00 2.17
193 194 4.864704 ACAAGACGGGCAAACATAAAAT 57.135 36.364 0.00 0.00 0.00 1.82
194 195 5.106078 GGATACAAGACGGGCAAACATAAAA 60.106 40.000 0.00 0.00 0.00 1.52
195 196 4.396790 GGATACAAGACGGGCAAACATAAA 59.603 41.667 0.00 0.00 0.00 1.40
196 197 3.942748 GGATACAAGACGGGCAAACATAA 59.057 43.478 0.00 0.00 0.00 1.90
197 198 3.537580 GGATACAAGACGGGCAAACATA 58.462 45.455 0.00 0.00 0.00 2.29
198 199 2.365582 GGATACAAGACGGGCAAACAT 58.634 47.619 0.00 0.00 0.00 2.71
199 200 1.816074 GGATACAAGACGGGCAAACA 58.184 50.000 0.00 0.00 0.00 2.83
200 201 0.725117 CGGATACAAGACGGGCAAAC 59.275 55.000 0.00 0.00 0.00 2.93
201 202 0.322322 ACGGATACAAGACGGGCAAA 59.678 50.000 0.00 0.00 0.00 3.68
202 203 0.390603 CACGGATACAAGACGGGCAA 60.391 55.000 0.00 0.00 0.00 4.52
203 204 1.216977 CACGGATACAAGACGGGCA 59.783 57.895 0.00 0.00 0.00 5.36
204 205 0.104304 ATCACGGATACAAGACGGGC 59.896 55.000 0.00 0.00 0.00 6.13
205 206 1.538204 CCATCACGGATACAAGACGGG 60.538 57.143 0.00 0.00 36.56 5.28
206 207 1.136305 ACCATCACGGATACAAGACGG 59.864 52.381 0.00 0.00 38.63 4.79
207 208 2.193447 CACCATCACGGATACAAGACG 58.807 52.381 0.00 0.00 38.63 4.18
208 209 3.247006 ACACCATCACGGATACAAGAC 57.753 47.619 0.00 0.00 38.63 3.01
209 210 4.021229 ACTACACCATCACGGATACAAGA 58.979 43.478 0.00 0.00 38.63 3.02
210 211 4.112634 CACTACACCATCACGGATACAAG 58.887 47.826 0.00 0.00 38.63 3.16
211 212 3.118920 CCACTACACCATCACGGATACAA 60.119 47.826 0.00 0.00 38.63 2.41
212 213 2.429250 CCACTACACCATCACGGATACA 59.571 50.000 0.00 0.00 38.63 2.29
213 214 2.802057 GCCACTACACCATCACGGATAC 60.802 54.545 0.00 0.00 38.63 2.24
214 215 1.411246 GCCACTACACCATCACGGATA 59.589 52.381 0.00 0.00 38.63 2.59
215 216 0.178068 GCCACTACACCATCACGGAT 59.822 55.000 0.00 0.00 38.63 4.18
216 217 1.188871 TGCCACTACACCATCACGGA 61.189 55.000 0.00 0.00 38.63 4.69
217 218 0.740868 CTGCCACTACACCATCACGG 60.741 60.000 0.00 0.00 42.50 4.94
218 219 0.740868 CCTGCCACTACACCATCACG 60.741 60.000 0.00 0.00 0.00 4.35
219 220 0.324943 ACCTGCCACTACACCATCAC 59.675 55.000 0.00 0.00 0.00 3.06
220 221 1.831106 CTACCTGCCACTACACCATCA 59.169 52.381 0.00 0.00 0.00 3.07
221 222 1.831736 ACTACCTGCCACTACACCATC 59.168 52.381 0.00 0.00 0.00 3.51
222 223 1.555075 CACTACCTGCCACTACACCAT 59.445 52.381 0.00 0.00 0.00 3.55
223 224 0.973632 CACTACCTGCCACTACACCA 59.026 55.000 0.00 0.00 0.00 4.17
224 225 0.391263 GCACTACCTGCCACTACACC 60.391 60.000 0.00 0.00 40.42 4.16
225 226 3.139029 GCACTACCTGCCACTACAC 57.861 57.895 0.00 0.00 40.42 2.90
233 234 3.536956 TTAGTATGTGGCACTACCTGC 57.463 47.619 19.83 4.81 46.31 4.85
234 235 7.441836 TGATAATTAGTATGTGGCACTACCTG 58.558 38.462 19.83 0.00 40.22 4.00
235 236 7.612065 TGATAATTAGTATGTGGCACTACCT 57.388 36.000 19.83 13.04 40.22 3.08
236 237 8.848474 ATTGATAATTAGTATGTGGCACTACC 57.152 34.615 19.83 6.06 39.84 3.18
239 240 9.507329 CCTTATTGATAATTAGTATGTGGCACT 57.493 33.333 19.83 6.99 0.00 4.40
240 241 8.237267 GCCTTATTGATAATTAGTATGTGGCAC 58.763 37.037 11.55 11.55 34.00 5.01
241 242 7.941790 TGCCTTATTGATAATTAGTATGTGGCA 59.058 33.333 11.89 11.89 40.38 4.92
242 243 8.335532 TGCCTTATTGATAATTAGTATGTGGC 57.664 34.615 0.00 0.00 0.00 5.01
243 244 8.454106 GCTGCCTTATTGATAATTAGTATGTGG 58.546 37.037 0.00 0.00 0.00 4.17
244 245 9.002600 TGCTGCCTTATTGATAATTAGTATGTG 57.997 33.333 0.00 0.00 0.00 3.21
245 246 9.745018 ATGCTGCCTTATTGATAATTAGTATGT 57.255 29.630 0.00 0.00 0.00 2.29
249 250 9.971922 GAAAATGCTGCCTTATTGATAATTAGT 57.028 29.630 0.00 0.00 0.00 2.24
250 251 9.415544 GGAAAATGCTGCCTTATTGATAATTAG 57.584 33.333 0.00 0.00 0.00 1.73
251 252 9.146586 AGGAAAATGCTGCCTTATTGATAATTA 57.853 29.630 0.00 0.00 0.00 1.40
252 253 8.026396 AGGAAAATGCTGCCTTATTGATAATT 57.974 30.769 0.00 0.00 0.00 1.40
253 254 7.508296 AGAGGAAAATGCTGCCTTATTGATAAT 59.492 33.333 0.00 0.00 30.70 1.28
254 255 6.835488 AGAGGAAAATGCTGCCTTATTGATAA 59.165 34.615 0.00 0.00 30.70 1.75
255 256 6.367983 AGAGGAAAATGCTGCCTTATTGATA 58.632 36.000 0.00 0.00 30.70 2.15
256 257 5.206587 AGAGGAAAATGCTGCCTTATTGAT 58.793 37.500 0.00 0.00 30.70 2.57
257 258 4.603131 AGAGGAAAATGCTGCCTTATTGA 58.397 39.130 0.00 0.00 30.70 2.57
258 259 4.996788 AGAGGAAAATGCTGCCTTATTG 57.003 40.909 0.00 0.00 30.70 1.90
259 260 7.480760 TTTTAGAGGAAAATGCTGCCTTATT 57.519 32.000 0.00 0.00 31.90 1.40
260 261 7.480760 TTTTTAGAGGAAAATGCTGCCTTAT 57.519 32.000 0.00 0.00 36.89 1.73
261 262 6.909550 TTTTTAGAGGAAAATGCTGCCTTA 57.090 33.333 0.00 0.00 36.89 2.69
262 263 5.806654 TTTTTAGAGGAAAATGCTGCCTT 57.193 34.783 0.00 0.00 36.89 4.35
282 283 6.699575 AAATAGCAGACTGTGTGACTTTTT 57.300 33.333 9.36 9.62 0.00 1.94
283 284 6.699575 AAAATAGCAGACTGTGTGACTTTT 57.300 33.333 9.36 7.67 0.00 2.27
284 285 6.699575 AAAAATAGCAGACTGTGTGACTTT 57.300 33.333 9.36 2.17 0.00 2.66
319 320 0.107945 TTGTTTGGGGTTGCAGTTGC 60.108 50.000 0.00 0.00 42.50 4.17
326 327 2.632028 TGATGTGGATTGTTTGGGGTTG 59.368 45.455 0.00 0.00 0.00 3.77
329 330 1.550072 GGTGATGTGGATTGTTTGGGG 59.450 52.381 0.00 0.00 0.00 4.96
387 412 2.449031 ATTGCTTGCTCGGTCACGGA 62.449 55.000 0.00 0.00 41.39 4.69
389 414 0.238289 AAATTGCTTGCTCGGTCACG 59.762 50.000 0.00 0.00 42.74 4.35
390 415 1.266718 TGAAATTGCTTGCTCGGTCAC 59.733 47.619 0.00 0.00 0.00 3.67
391 416 1.536766 CTGAAATTGCTTGCTCGGTCA 59.463 47.619 0.00 0.00 0.00 4.02
392 417 1.730446 GCTGAAATTGCTTGCTCGGTC 60.730 52.381 0.00 0.00 0.00 4.79
393 418 0.242017 GCTGAAATTGCTTGCTCGGT 59.758 50.000 0.00 0.00 0.00 4.69
394 419 0.241749 TGCTGAAATTGCTTGCTCGG 59.758 50.000 4.17 0.00 0.00 4.63
395 420 1.334054 GTGCTGAAATTGCTTGCTCG 58.666 50.000 4.17 0.00 0.00 5.03
396 421 2.056577 GTGTGCTGAAATTGCTTGCTC 58.943 47.619 4.17 1.77 0.00 4.26
397 422 1.269936 GGTGTGCTGAAATTGCTTGCT 60.270 47.619 4.17 0.00 0.00 3.91
398 423 1.142474 GGTGTGCTGAAATTGCTTGC 58.858 50.000 0.00 0.00 0.00 4.01
399 424 1.411394 CGGTGTGCTGAAATTGCTTG 58.589 50.000 0.00 0.00 0.00 4.01
400 425 0.318955 GCGGTGTGCTGAAATTGCTT 60.319 50.000 0.00 0.00 41.73 3.91
401 426 1.286880 GCGGTGTGCTGAAATTGCT 59.713 52.632 0.00 0.00 41.73 3.91
402 427 2.082366 CGCGGTGTGCTGAAATTGC 61.082 57.895 0.00 0.00 43.27 3.56
403 428 1.442520 CCGCGGTGTGCTGAAATTG 60.443 57.895 19.50 0.00 43.27 2.32
404 429 2.625823 CCCGCGGTGTGCTGAAATT 61.626 57.895 26.12 0.00 43.27 1.82
405 430 3.055719 CCCGCGGTGTGCTGAAAT 61.056 61.111 26.12 0.00 43.27 2.17
414 439 3.417275 TTTTTGTGTGCCCGCGGTG 62.417 57.895 26.12 16.79 0.00 4.94
415 440 3.141488 TTTTTGTGTGCCCGCGGT 61.141 55.556 26.12 0.00 0.00 5.68
702 727 1.136828 TGTACACTGCCACCTTTCCT 58.863 50.000 0.00 0.00 0.00 3.36
703 728 1.235724 GTGTACACTGCCACCTTTCC 58.764 55.000 18.92 0.00 0.00 3.13
715 740 1.338973 TGTCTCCTCGTTGGTGTACAC 59.661 52.381 18.01 18.01 37.07 2.90
799 824 7.201393 GCTAAATTATGCACGATCTAGCAGTAG 60.201 40.741 13.28 10.15 44.94 2.57
811 4075 4.438797 GCTTCACATGCTAAATTATGCACG 59.561 41.667 7.33 2.86 42.26 5.34
970 4234 2.364324 TCACGGTAGCTATAAGCCCAAG 59.636 50.000 0.00 0.00 43.77 3.61
980 4244 1.269778 GCATCTGCATCACGGTAGCTA 60.270 52.381 0.00 0.00 41.59 3.32
989 4253 6.147864 TGCGTATATATAGCATCTGCATCA 57.852 37.500 10.57 0.00 45.16 3.07
999 4263 4.369182 GGGTGGACATGCGTATATATAGC 58.631 47.826 0.00 6.30 0.00 2.97
1021 4285 1.550524 TGAGGATGAGACGTTCCAAGG 59.449 52.381 6.77 0.00 34.27 3.61
1023 4287 1.066858 GCTGAGGATGAGACGTTCCAA 60.067 52.381 6.77 0.00 34.27 3.53
1042 4306 1.805428 AATGAACTTGGCACGGTGGC 61.805 55.000 25.93 25.93 44.03 5.01
1072 7620 0.455633 GATTCTTGTTGGCTGCTGCG 60.456 55.000 9.65 0.00 40.82 5.18
1139 7711 2.158519 TCCCGCCATCACTATAGACTCA 60.159 50.000 6.78 0.00 0.00 3.41
1141 7713 2.677542 TCCCGCCATCACTATAGACT 57.322 50.000 6.78 0.00 0.00 3.24
1142 7714 2.028930 CCTTCCCGCCATCACTATAGAC 60.029 54.545 6.78 0.00 0.00 2.59
1144 7716 1.971357 ACCTTCCCGCCATCACTATAG 59.029 52.381 0.00 0.00 0.00 1.31
1145 7717 2.097110 ACCTTCCCGCCATCACTATA 57.903 50.000 0.00 0.00 0.00 1.31
1148 7720 0.609131 CAAACCTTCCCGCCATCACT 60.609 55.000 0.00 0.00 0.00 3.41
1193 7765 1.289109 CGGCGAAGAACACCACGATT 61.289 55.000 0.00 0.00 0.00 3.34
1301 7873 1.305219 GCTGCAGGTACATTTGCCGA 61.305 55.000 17.12 0.00 39.54 5.54
1380 7995 1.746220 AGATTTCGTCTGAGGTCTCGG 59.254 52.381 0.51 0.51 35.31 4.63
1388 8003 5.959618 TTGTCTGAGTAGATTTCGTCTGA 57.040 39.130 0.00 0.00 37.83 3.27
1408 8023 2.537560 GCATCTCGCCCGTGGATTG 61.538 63.158 0.00 0.00 32.94 2.67
1413 8028 2.655364 CTACGCATCTCGCCCGTG 60.655 66.667 0.00 0.00 43.23 4.94
1414 8029 3.900892 CCTACGCATCTCGCCCGT 61.901 66.667 0.00 0.00 43.23 5.28
1415 8030 4.647615 CCCTACGCATCTCGCCCG 62.648 72.222 0.00 0.00 43.23 6.13
1416 8031 2.306255 TTTCCCTACGCATCTCGCCC 62.306 60.000 0.00 0.00 43.23 6.13
1489 8104 2.042464 CTACATAAGAGCTGGCCTGGA 58.958 52.381 12.06 0.00 0.00 3.86
1517 8132 9.886132 GAAAGAACACCCAATAGACTCTAAATA 57.114 33.333 0.00 0.00 0.00 1.40
1518 8133 8.606830 AGAAAGAACACCCAATAGACTCTAAAT 58.393 33.333 0.00 0.00 0.00 1.40
1525 8140 4.389077 CGACAGAAAGAACACCCAATAGAC 59.611 45.833 0.00 0.00 0.00 2.59
1530 8145 1.134220 AGCGACAGAAAGAACACCCAA 60.134 47.619 0.00 0.00 0.00 4.12
1549 8178 8.988064 TGAGCAAAGAATGTACTAGAACTTAG 57.012 34.615 0.00 0.00 0.00 2.18
1561 8190 6.655078 ACAGGTATTTTGAGCAAAGAATGT 57.345 33.333 0.00 0.00 0.00 2.71
1632 8263 7.329499 ACCAATATGCATGCTAAAACAATTGA 58.671 30.769 20.33 0.00 0.00 2.57
1687 8322 6.455380 GCAAAATTATTGCGTTGTGTGCATAT 60.455 34.615 8.79 0.00 42.84 1.78
1705 8340 5.859205 AGGTGTTCTCTTTCAGCAAAATT 57.141 34.783 0.00 0.00 34.97 1.82
1706 8341 5.827797 TGTAGGTGTTCTCTTTCAGCAAAAT 59.172 36.000 0.00 0.00 34.97 1.82
1720 8355 1.732259 CTCCGCAACATGTAGGTGTTC 59.268 52.381 0.00 0.00 40.17 3.18
1727 8362 1.216977 CCGACCTCCGCAACATGTA 59.783 57.895 0.00 0.00 36.84 2.29
1758 8393 7.915293 TGTAGATGTTTGTAGGGTTATTGTG 57.085 36.000 0.00 0.00 0.00 3.33
1759 8394 9.174166 GATTGTAGATGTTTGTAGGGTTATTGT 57.826 33.333 0.00 0.00 0.00 2.71
1771 8406 4.759782 AGGAGTCCGATTGTAGATGTTTG 58.240 43.478 2.76 0.00 0.00 2.93
1772 8407 4.466370 TGAGGAGTCCGATTGTAGATGTTT 59.534 41.667 2.76 0.00 0.00 2.83
1774 8409 3.632333 TGAGGAGTCCGATTGTAGATGT 58.368 45.455 2.76 0.00 0.00 3.06
1781 8416 1.993370 GACGTTTGAGGAGTCCGATTG 59.007 52.381 2.76 0.00 0.00 2.67
1782 8417 1.067071 GGACGTTTGAGGAGTCCGATT 60.067 52.381 2.76 0.00 43.96 3.34
1783 8418 0.531200 GGACGTTTGAGGAGTCCGAT 59.469 55.000 2.76 0.00 43.96 4.18
1784 8419 1.962144 GGACGTTTGAGGAGTCCGA 59.038 57.895 2.76 0.00 43.96 4.55
1785 8420 4.573162 GGACGTTTGAGGAGTCCG 57.427 61.111 2.76 0.00 43.96 4.79
1793 8428 6.698008 TCTAAATCGTATAGGGACGTTTGA 57.302 37.500 0.00 0.00 43.39 2.69
1799 8434 5.392811 CCGTCCATCTAAATCGTATAGGGAC 60.393 48.000 0.00 0.00 39.05 4.46
1800 8435 4.703575 CCGTCCATCTAAATCGTATAGGGA 59.296 45.833 0.00 0.00 0.00 4.20
1804 8439 4.082408 CAGGCCGTCCATCTAAATCGTATA 60.082 45.833 0.00 0.00 33.74 1.47
1810 8445 3.864789 AATCAGGCCGTCCATCTAAAT 57.135 42.857 0.00 0.00 33.74 1.40
1812 8447 4.346709 TCATTAATCAGGCCGTCCATCTAA 59.653 41.667 0.00 0.00 33.74 2.10
1813 8448 3.901222 TCATTAATCAGGCCGTCCATCTA 59.099 43.478 0.00 0.00 33.74 1.98
1814 8449 2.705658 TCATTAATCAGGCCGTCCATCT 59.294 45.455 0.00 0.00 33.74 2.90
1816 8451 2.487265 GGTCATTAATCAGGCCGTCCAT 60.487 50.000 0.00 0.00 33.74 3.41
1817 8452 1.134220 GGTCATTAATCAGGCCGTCCA 60.134 52.381 0.00 0.00 33.74 4.02
1819 8454 1.217882 CGGTCATTAATCAGGCCGTC 58.782 55.000 9.95 0.00 35.11 4.79
1820 8455 0.179056 CCGGTCATTAATCAGGCCGT 60.179 55.000 15.30 0.00 37.76 5.68
1821 8456 0.179056 ACCGGTCATTAATCAGGCCG 60.179 55.000 0.00 10.95 38.99 6.13
1824 8459 3.260475 TGTGACCGGTCATTAATCAGG 57.740 47.619 38.11 0.00 42.18 3.86
1827 8462 6.027749 GTGATTTTGTGACCGGTCATTAATC 58.972 40.000 34.22 34.22 42.18 1.75
1828 8463 5.475220 TGTGATTTTGTGACCGGTCATTAAT 59.525 36.000 38.11 31.73 42.18 1.40
1829 8464 4.822350 TGTGATTTTGTGACCGGTCATTAA 59.178 37.500 38.11 30.42 42.18 1.40
1830 8465 4.390264 TGTGATTTTGTGACCGGTCATTA 58.610 39.130 38.11 26.96 42.18 1.90
1831 8466 3.218453 TGTGATTTTGTGACCGGTCATT 58.782 40.909 38.11 20.88 42.18 2.57
1832 8467 2.857483 TGTGATTTTGTGACCGGTCAT 58.143 42.857 38.11 23.38 42.18 3.06
1833 8468 2.333688 TGTGATTTTGTGACCGGTCA 57.666 45.000 33.23 33.23 37.24 4.02
1834 8469 3.368495 GTTTGTGATTTTGTGACCGGTC 58.632 45.455 28.17 28.17 0.00 4.79
1835 8470 2.100087 GGTTTGTGATTTTGTGACCGGT 59.900 45.455 6.92 6.92 0.00 5.28
1836 8471 2.099921 TGGTTTGTGATTTTGTGACCGG 59.900 45.455 0.00 0.00 0.00 5.28
1841 8476 2.033832 GCGCTTGGTTTGTGATTTTGTG 60.034 45.455 0.00 0.00 0.00 3.33
1851 8486 0.662619 TGAAGAGTGCGCTTGGTTTG 59.337 50.000 9.73 0.00 0.00 2.93
1852 8487 1.609208 ATGAAGAGTGCGCTTGGTTT 58.391 45.000 9.73 0.00 0.00 3.27
1854 8489 1.676014 GGTATGAAGAGTGCGCTTGGT 60.676 52.381 9.73 0.00 0.00 3.67
1859 8494 1.132588 GATCGGTATGAAGAGTGCGC 58.867 55.000 0.00 0.00 0.00 6.09
1876 8511 3.220940 GGTTAGCCTAGACGTACAGGAT 58.779 50.000 17.07 13.66 33.42 3.24
1879 8514 2.031437 GTCGGTTAGCCTAGACGTACAG 59.969 54.545 0.00 0.00 0.00 2.74
1880 8515 2.009774 GTCGGTTAGCCTAGACGTACA 58.990 52.381 0.00 0.00 0.00 2.90
1887 8522 1.409427 CAAGGGAGTCGGTTAGCCTAG 59.591 57.143 0.00 0.00 0.00 3.02
1889 8524 0.252103 TCAAGGGAGTCGGTTAGCCT 60.252 55.000 0.00 0.00 0.00 4.58
1897 8532 1.967066 AGCTGGATATCAAGGGAGTCG 59.033 52.381 9.24 0.00 0.00 4.18
1899 8534 3.051940 TGAGCTGGATATCAAGGGAGT 57.948 47.619 9.24 0.00 0.00 3.85
1901 8536 6.479006 CAAATATGAGCTGGATATCAAGGGA 58.521 40.000 9.24 0.00 0.00 4.20
1902 8537 5.651139 CCAAATATGAGCTGGATATCAAGGG 59.349 44.000 9.24 0.00 31.38 3.95
1917 8552 6.358974 TCTCCATATTCGCTCCAAATATGA 57.641 37.500 14.40 3.94 44.43 2.15
1918 8553 6.652481 ACTTCTCCATATTCGCTCCAAATATG 59.348 38.462 8.28 8.28 42.67 1.78
1920 8555 6.174720 ACTTCTCCATATTCGCTCCAAATA 57.825 37.500 0.00 0.00 0.00 1.40
1923 8558 4.191544 CAACTTCTCCATATTCGCTCCAA 58.808 43.478 0.00 0.00 0.00 3.53
1931 8566 4.927267 TGTGTCCCAACTTCTCCATATT 57.073 40.909 0.00 0.00 0.00 1.28
1937 8572 1.676014 CCGGATGTGTCCCAACTTCTC 60.676 57.143 0.00 0.00 41.83 2.87
1938 8573 0.324943 CCGGATGTGTCCCAACTTCT 59.675 55.000 0.00 0.00 41.83 2.85
1944 8579 2.352821 CGTACCCGGATGTGTCCCA 61.353 63.158 0.73 0.00 41.83 4.37
1945 8580 1.891722 AACGTACCCGGATGTGTCCC 61.892 60.000 0.73 0.00 41.83 4.46
1951 8586 0.799534 GTGACGAACGTACCCGGATG 60.800 60.000 0.73 0.00 38.78 3.51
1960 8595 0.524414 TGATCCGATGTGACGAACGT 59.476 50.000 0.00 0.00 35.09 3.99
1964 8599 1.132453 GTGTCTGATCCGATGTGACGA 59.868 52.381 0.00 0.00 35.09 4.20
1965 8600 1.135402 TGTGTCTGATCCGATGTGACG 60.135 52.381 0.00 0.00 0.00 4.35
1967 8602 1.135402 CGTGTGTCTGATCCGATGTGA 60.135 52.381 0.00 0.00 0.00 3.58
1971 8606 1.335182 CTAGCGTGTGTCTGATCCGAT 59.665 52.381 0.00 0.00 0.00 4.18
1972 8607 0.733150 CTAGCGTGTGTCTGATCCGA 59.267 55.000 0.00 0.00 0.00 4.55
1974 8609 0.528684 GGCTAGCGTGTGTCTGATCC 60.529 60.000 9.00 0.00 0.00 3.36
1981 8616 0.036164 TCAAATGGGCTAGCGTGTGT 59.964 50.000 9.00 0.00 0.00 3.72
1983 8618 0.676782 GGTCAAATGGGCTAGCGTGT 60.677 55.000 9.00 0.00 0.00 4.49
1991 8626 2.086610 ATATGTGGGGTCAAATGGGC 57.913 50.000 0.00 0.00 0.00 5.36
1994 8629 4.082787 GGCGAATATATGTGGGGTCAAATG 60.083 45.833 0.00 0.00 0.00 2.32
1996 8631 3.482436 GGCGAATATATGTGGGGTCAAA 58.518 45.455 0.00 0.00 0.00 2.69
1997 8632 2.224670 GGGCGAATATATGTGGGGTCAA 60.225 50.000 0.00 0.00 0.00 3.18
1999 8634 1.339727 GGGGCGAATATATGTGGGGTC 60.340 57.143 0.00 0.00 0.00 4.46
2015 8650 2.941583 GGGATGGGGATAGGGGGC 60.942 72.222 0.00 0.00 0.00 5.80
2016 8651 2.610859 CGGGATGGGGATAGGGGG 60.611 72.222 0.00 0.00 0.00 5.40
2017 8652 2.610859 CCGGGATGGGGATAGGGG 60.611 72.222 0.00 0.00 0.00 4.79
2026 8661 1.449601 CCAGTTTCGTCCGGGATGG 60.450 63.158 16.03 7.04 40.09 3.51
2052 8687 0.615331 AGTCACCACGATCTGGCATT 59.385 50.000 10.15 0.00 45.32 3.56
2054 8689 1.293179 CAGTCACCACGATCTGGCA 59.707 57.895 10.15 0.00 45.32 4.92
2059 8694 2.103042 GGCTGCAGTCACCACGATC 61.103 63.158 14.88 0.00 0.00 3.69
2062 8697 2.740055 GAGGCTGCAGTCACCACG 60.740 66.667 22.50 0.00 0.00 4.94
2080 8715 3.712881 GTTGTCACTGCGTCCGGC 61.713 66.667 0.00 0.00 43.96 6.13
2091 8726 2.359850 GGCGCCAGATGGTTGTCA 60.360 61.111 24.80 0.00 37.57 3.58
2095 8730 3.978193 TTGGGGCGCCAGATGGTT 61.978 61.111 30.85 0.00 37.57 3.67
2101 8736 2.947938 CTATGGAGTTGGGGCGCCAG 62.948 65.000 30.85 8.91 41.41 4.85
2118 8753 2.695359 GAAGGGATTGCGTTGTCACTA 58.305 47.619 0.00 0.00 0.00 2.74
2119 8754 1.523758 GAAGGGATTGCGTTGTCACT 58.476 50.000 0.00 0.00 0.00 3.41
2150 8785 4.554036 GCCCGATGCCCCAGAGAC 62.554 72.222 0.00 0.00 0.00 3.36
2167 8802 1.467713 GCGTTGACCTCTTACTCGGAG 60.468 57.143 2.83 2.83 0.00 4.63
2169 8804 0.526662 AGCGTTGACCTCTTACTCGG 59.473 55.000 0.00 0.00 0.00 4.63
2174 8809 3.717707 GCATGATAGCGTTGACCTCTTA 58.282 45.455 0.00 0.00 0.00 2.10
2188 8823 2.212652 GATGGCTTGTGACGCATGATA 58.787 47.619 0.00 0.00 0.00 2.15
2190 8825 1.026182 GGATGGCTTGTGACGCATGA 61.026 55.000 0.00 0.00 0.00 3.07
2194 8829 4.166011 GCGGATGGCTTGTGACGC 62.166 66.667 0.00 0.00 40.19 5.19
2221 8856 2.098233 CACACGGTGGGTATGTCGC 61.098 63.158 13.48 0.00 0.00 5.19
2227 8862 2.097036 CTATGTCTCACACGGTGGGTA 58.903 52.381 10.66 0.00 35.23 3.69
2228 8863 0.895530 CTATGTCTCACACGGTGGGT 59.104 55.000 10.66 0.00 35.23 4.51
2237 8872 1.195115 TCCTGCACCCTATGTCTCAC 58.805 55.000 0.00 0.00 0.00 3.51
2238 8873 1.833630 CTTCCTGCACCCTATGTCTCA 59.166 52.381 0.00 0.00 0.00 3.27
2242 8877 1.207488 TGGCTTCCTGCACCCTATGT 61.207 55.000 0.00 0.00 45.15 2.29
2247 8882 4.329545 TCGTGGCTTCCTGCACCC 62.330 66.667 0.00 0.00 45.15 4.61
2253 8888 0.971447 GAGGGTAGTCGTGGCTTCCT 60.971 60.000 0.00 0.00 0.00 3.36
2254 8889 1.516423 GAGGGTAGTCGTGGCTTCC 59.484 63.158 0.00 0.00 0.00 3.46
2272 8907 2.439701 TCCACCGCCTCTACCTCG 60.440 66.667 0.00 0.00 0.00 4.63
2277 8912 2.363795 CCACCTCCACCGCCTCTA 60.364 66.667 0.00 0.00 0.00 2.43
2284 8919 1.600916 GTGCAACTCCACCTCCACC 60.601 63.158 0.00 0.00 0.00 4.61
2285 8920 1.148273 TGTGCAACTCCACCTCCAC 59.852 57.895 0.00 0.00 38.04 4.02
2286 8921 1.148273 GTGTGCAACTCCACCTCCA 59.852 57.895 0.00 0.00 38.04 3.86
2303 8938 1.004918 CTTCCTCGTCAAAGGCGGT 60.005 57.895 0.00 0.00 36.29 5.68
2305 8940 2.391389 GGCTTCCTCGTCAAAGGCG 61.391 63.158 4.80 0.00 38.14 5.52
2326 8961 4.113815 TTGAGGATGCGGGCAGGG 62.114 66.667 0.00 0.00 0.00 4.45
2330 8965 1.078143 ACTTCTTGAGGATGCGGGC 60.078 57.895 0.00 0.00 0.00 6.13
2342 8977 2.376518 TCATCCTCCTTTGCCACTTCTT 59.623 45.455 0.00 0.00 0.00 2.52
2358 8993 0.179034 GGAGAGGGTGCATGTCATCC 60.179 60.000 10.44 10.44 46.71 3.51
2361 8996 2.659063 CGGGAGAGGGTGCATGTCA 61.659 63.158 0.00 0.00 0.00 3.58
2378 9013 3.428282 CGCCCGGTTTTTCTCCCG 61.428 66.667 0.00 0.00 43.82 5.14
2389 9024 3.883744 GATAGCATGGACCGCCCGG 62.884 68.421 4.96 4.96 42.03 5.73
2390 9025 2.357517 GATAGCATGGACCGCCCG 60.358 66.667 0.00 0.00 37.93 6.13
2392 9027 1.664965 GACGATAGCATGGACCGCC 60.665 63.158 0.00 0.00 42.67 6.13
2393 9028 2.016704 CGACGATAGCATGGACCGC 61.017 63.158 0.00 0.00 42.67 5.68
2394 9029 0.589708 TACGACGATAGCATGGACCG 59.410 55.000 0.00 0.00 42.67 4.79
2404 9039 1.590932 GAGAGGGCAGTACGACGATA 58.409 55.000 0.00 0.00 0.00 2.92
2409 9044 1.076923 GAGGGAGAGGGCAGTACGA 60.077 63.158 0.00 0.00 0.00 3.43
2430 9065 4.038804 TCTTGGGGGAGGGGGAGG 62.039 72.222 0.00 0.00 0.00 4.30
2431 9066 2.367512 CTCTTGGGGGAGGGGGAG 60.368 72.222 0.00 0.00 0.00 4.30
2432 9067 2.492599 CTTCTCTTGGGGGAGGGGGA 62.493 65.000 0.00 0.00 34.39 4.81
2433 9068 2.003548 CTTCTCTTGGGGGAGGGGG 61.004 68.421 0.00 0.00 34.39 5.40
2434 9069 2.003548 CCTTCTCTTGGGGGAGGGG 61.004 68.421 0.00 0.00 34.39 4.79
2435 9070 0.985490 CTCCTTCTCTTGGGGGAGGG 60.985 65.000 0.00 0.00 40.98 4.30
2436 9071 2.614001 CTCCTTCTCTTGGGGGAGG 58.386 63.158 0.00 0.00 40.98 4.30
2439 9074 0.915364 CTTCCTCCTTCTCTTGGGGG 59.085 60.000 0.00 0.00 46.56 5.40
2440 9075 0.254462 GCTTCCTCCTTCTCTTGGGG 59.746 60.000 0.00 0.00 0.00 4.96
2441 9076 0.254462 GGCTTCCTCCTTCTCTTGGG 59.746 60.000 0.00 0.00 0.00 4.12
2442 9077 0.987294 TGGCTTCCTCCTTCTCTTGG 59.013 55.000 0.00 0.00 0.00 3.61
2443 9078 1.627834 ACTGGCTTCCTCCTTCTCTTG 59.372 52.381 0.00 0.00 0.00 3.02
2444 9079 1.627834 CACTGGCTTCCTCCTTCTCTT 59.372 52.381 0.00 0.00 0.00 2.85
2445 9080 1.203237 TCACTGGCTTCCTCCTTCTCT 60.203 52.381 0.00 0.00 0.00 3.10
2456 9091 1.837051 TCTGACCCGTCACTGGCTT 60.837 57.895 0.00 0.00 35.46 4.35
2460 9095 0.389391 AGTTGTCTGACCCGTCACTG 59.611 55.000 5.17 0.00 35.46 3.66
2468 9103 3.531538 TCACTGTCAAAGTTGTCTGACC 58.468 45.455 5.17 0.00 41.07 4.02
2471 9106 2.938451 TGCTCACTGTCAAAGTTGTCTG 59.062 45.455 0.00 0.00 36.83 3.51
2480 9115 0.247460 CCGGATCTGCTCACTGTCAA 59.753 55.000 0.00 0.00 0.00 3.18
2481 9116 0.900182 ACCGGATCTGCTCACTGTCA 60.900 55.000 9.46 0.00 0.00 3.58
2482 9117 0.247736 AACCGGATCTGCTCACTGTC 59.752 55.000 9.46 0.00 0.00 3.51
2483 9118 0.247736 GAACCGGATCTGCTCACTGT 59.752 55.000 9.46 0.00 0.00 3.55
2484 9119 0.803768 CGAACCGGATCTGCTCACTG 60.804 60.000 9.46 0.00 0.00 3.66
2493 9128 3.248602 CAGAAAATGGATCGAACCGGATC 59.751 47.826 9.46 4.52 41.67 3.36
2500 9135 4.635765 GTCATGGACAGAAAATGGATCGAA 59.364 41.667 0.00 0.00 32.09 3.71
2507 9142 5.248640 AGTAGTGGTCATGGACAGAAAATG 58.751 41.667 0.00 0.00 33.68 2.32
2513 9148 2.834549 AGGAAGTAGTGGTCATGGACAG 59.165 50.000 0.00 0.00 33.68 3.51
2518 9153 2.100197 TCGGAGGAAGTAGTGGTCATG 58.900 52.381 0.00 0.00 0.00 3.07
2537 9172 1.557443 CTGTCGACCTTGCCGTGTTC 61.557 60.000 14.12 0.00 0.00 3.18
2540 9175 2.709125 TTCCTGTCGACCTTGCCGTG 62.709 60.000 14.12 0.00 0.00 4.94
2544 9179 0.321653 ACCATTCCTGTCGACCTTGC 60.322 55.000 14.12 0.00 0.00 4.01
2556 9191 0.034089 ACAGCTGCCCTTACCATTCC 60.034 55.000 15.27 0.00 0.00 3.01
2561 9196 1.379044 ATGCACAGCTGCCCTTACC 60.379 57.895 15.27 0.00 43.51 2.85
2565 9200 1.975407 GTTCATGCACAGCTGCCCT 60.975 57.895 15.27 0.00 43.51 5.19
2569 9204 5.550232 TGTATAAAGTTCATGCACAGCTG 57.450 39.130 13.48 13.48 0.00 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.