Multiple sequence alignment - TraesCS7A01G199300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G199300 chr7A 100.000 2231 0 0 1 2231 162401457 162399227 0.000000e+00 4120
1 TraesCS7A01G199300 chr7A 84.663 802 83 25 458 1252 162408770 162408002 0.000000e+00 763
2 TraesCS7A01G199300 chr7A 85.584 437 27 8 1 432 162415479 162415074 2.050000e-115 425
3 TraesCS7A01G199300 chr7A 85.766 274 35 3 1957 2227 2946655 2946383 1.010000e-73 287
4 TraesCS7A01G199300 chr7A 85.526 228 27 3 1006 1233 162454206 162453985 1.330000e-57 233
5 TraesCS7A01G199300 chr7A 85.398 226 27 3 1006 1231 162414357 162414138 1.720000e-56 230
6 TraesCS7A01G199300 chr7A 88.235 102 9 3 1557 1658 97021638 97021736 3.890000e-23 119
7 TraesCS7A01G199300 chr7B 92.451 1126 57 15 458 1574 123278892 123277786 0.000000e+00 1583
8 TraesCS7A01G199300 chr7B 85.088 228 28 4 1006 1233 123288285 123288064 6.200000e-56 228
9 TraesCS7A01G199300 chr7B 84.685 222 28 3 1010 1231 123285064 123284849 1.340000e-52 217
10 TraesCS7A01G199300 chr7D 91.906 1112 55 19 462 1569 160980064 160978984 0.000000e+00 1522
11 TraesCS7A01G199300 chr7D 88.081 495 50 9 1738 2231 505422702 505423188 1.490000e-161 579
12 TraesCS7A01G199300 chr7D 86.463 229 25 3 1005 1233 161040101 161039879 1.710000e-61 246
13 TraesCS7A01G199300 chr7D 84.211 228 30 4 1006 1233 161060689 161060468 1.340000e-52 217
14 TraesCS7A01G199300 chr4D 90.439 387 29 8 1741 2126 503542392 503542013 9.200000e-139 503
15 TraesCS7A01G199300 chr5D 81.835 545 75 18 1707 2231 563455676 563455136 9.460000e-119 436
16 TraesCS7A01G199300 chr5D 90.323 93 6 3 1566 1657 455323421 455323331 3.890000e-23 119
17 TraesCS7A01G199300 chr6D 81.921 531 63 24 1707 2231 221449103 221448600 3.430000e-113 418
18 TraesCS7A01G199300 chr6D 91.860 86 7 0 1572 1657 462762739 462762824 1.080000e-23 121
19 TraesCS7A01G199300 chr3A 80.835 527 67 26 1710 2231 485057745 485057248 1.250000e-102 383
20 TraesCS7A01G199300 chr3A 91.860 86 7 0 1572 1657 499556223 499556308 1.080000e-23 121
21 TraesCS7A01G199300 chr3A 87.879 99 11 1 1573 1671 19272104 19272007 5.030000e-22 115
22 TraesCS7A01G199300 chr1B 85.042 361 48 5 1873 2231 492380179 492380535 1.630000e-96 363
23 TraesCS7A01G199300 chr5B 79.705 542 74 27 1707 2231 555956721 555957243 2.110000e-95 359
24 TraesCS7A01G199300 chr5B 91.954 87 7 0 1572 1658 165930730 165930644 3.010000e-24 122
25 TraesCS7A01G199300 chr5B 91.954 87 7 0 1571 1657 670118937 670118851 3.010000e-24 122
26 TraesCS7A01G199300 chr6A 88.809 277 29 2 1956 2231 262949201 262949476 2.740000e-89 339
27 TraesCS7A01G199300 chr4B 93.023 86 6 0 1572 1657 525796144 525796059 2.330000e-25 126
28 TraesCS7A01G199300 chr2B 93.023 86 6 0 1572 1657 95449801 95449716 2.330000e-25 126
29 TraesCS7A01G199300 chr4A 94.000 50 1 2 1707 1754 727259982 727260031 8.540000e-10 75


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G199300 chr7A 162399227 162401457 2230 True 4120.0 4120 100.0000 1 2231 1 chr7A.!!$R2 2230
1 TraesCS7A01G199300 chr7A 162408002 162408770 768 True 763.0 763 84.6630 458 1252 1 chr7A.!!$R3 794
2 TraesCS7A01G199300 chr7A 162414138 162415479 1341 True 327.5 425 85.4910 1 1231 2 chr7A.!!$R5 1230
3 TraesCS7A01G199300 chr7B 123277786 123278892 1106 True 1583.0 1583 92.4510 458 1574 1 chr7B.!!$R1 1116
4 TraesCS7A01G199300 chr7B 123284849 123288285 3436 True 222.5 228 84.8865 1006 1233 2 chr7B.!!$R2 227
5 TraesCS7A01G199300 chr7D 160978984 160980064 1080 True 1522.0 1522 91.9060 462 1569 1 chr7D.!!$R1 1107
6 TraesCS7A01G199300 chr5D 563455136 563455676 540 True 436.0 436 81.8350 1707 2231 1 chr5D.!!$R2 524
7 TraesCS7A01G199300 chr6D 221448600 221449103 503 True 418.0 418 81.9210 1707 2231 1 chr6D.!!$R1 524
8 TraesCS7A01G199300 chr5B 555956721 555957243 522 False 359.0 359 79.7050 1707 2231 1 chr5B.!!$F1 524


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
347 352 0.031994 CGTTGGCAAAAGGGTTCCTG 59.968 55.0 0.0 0.0 32.13 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1262 3475 0.243907 TTTTCTGTCGCTCTCTCCCG 59.756 55.0 0.0 0.0 0.0 5.14 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 7.815068 CCTATGATTTACTTATGTCCTTCTCCG 59.185 40.741 0.00 0.00 0.00 4.63
67 68 7.308589 CCGAACTAACCAATCTCAGACATTTTT 60.309 37.037 0.00 0.00 0.00 1.94
174 177 7.455641 AAATGTCTGTATATCTACTCTCCCG 57.544 40.000 0.00 0.00 0.00 5.14
262 267 1.202639 CCCATGATAACTAGCACCGCA 60.203 52.381 0.00 0.00 0.00 5.69
264 269 1.522676 CATGATAACTAGCACCGCACG 59.477 52.381 0.00 0.00 0.00 5.34
306 311 7.803724 AGTAGTAAATTTAGAAGCCAAACACG 58.196 34.615 0.00 0.00 0.00 4.49
307 312 6.870971 AGTAAATTTAGAAGCCAAACACGA 57.129 33.333 0.00 0.00 0.00 4.35
308 313 7.448748 AGTAAATTTAGAAGCCAAACACGAT 57.551 32.000 0.00 0.00 0.00 3.73
309 314 8.556213 AGTAAATTTAGAAGCCAAACACGATA 57.444 30.769 0.00 0.00 0.00 2.92
310 315 9.005777 AGTAAATTTAGAAGCCAAACACGATAA 57.994 29.630 0.00 0.00 0.00 1.75
312 317 8.515473 AAATTTAGAAGCCAAACACGATAAAC 57.485 30.769 0.00 0.00 0.00 2.01
313 318 5.616488 TTAGAAGCCAAACACGATAAACC 57.384 39.130 0.00 0.00 0.00 3.27
314 319 3.751518 AGAAGCCAAACACGATAAACCT 58.248 40.909 0.00 0.00 0.00 3.50
315 320 4.901868 AGAAGCCAAACACGATAAACCTA 58.098 39.130 0.00 0.00 0.00 3.08
316 321 5.310451 AGAAGCCAAACACGATAAACCTAA 58.690 37.500 0.00 0.00 0.00 2.69
317 322 5.766174 AGAAGCCAAACACGATAAACCTAAA 59.234 36.000 0.00 0.00 0.00 1.85
318 323 6.263617 AGAAGCCAAACACGATAAACCTAAAA 59.736 34.615 0.00 0.00 0.00 1.52
319 324 6.009115 AGCCAAACACGATAAACCTAAAAG 57.991 37.500 0.00 0.00 0.00 2.27
321 326 5.158494 CCAAACACGATAAACCTAAAAGGC 58.842 41.667 0.00 0.00 39.63 4.35
323 328 4.023726 ACACGATAAACCTAAAAGGCCA 57.976 40.909 5.01 0.00 39.63 5.36
344 349 0.741915 TCACGTTGGCAAAAGGGTTC 59.258 50.000 0.00 0.00 0.00 3.62
347 352 0.031994 CGTTGGCAAAAGGGTTCCTG 59.968 55.000 0.00 0.00 32.13 3.86
363 368 4.157840 GGTTCCTGTTTGGCGATATTTTCT 59.842 41.667 0.00 0.00 35.26 2.52
364 369 5.332707 GTTCCTGTTTGGCGATATTTTCTC 58.667 41.667 0.00 0.00 35.26 2.87
387 392 7.336176 TCTCGATGACTACACAAATAGTACTGT 59.664 37.037 5.39 0.00 35.48 3.55
389 394 8.610035 TCGATGACTACACAAATAGTACTGTAG 58.390 37.037 5.39 10.50 41.23 2.74
460 495 3.660054 TCTCGATCGAGAGACTTTTCG 57.340 47.619 37.31 14.52 45.26 3.46
657 745 9.684448 ACATAATTGTCGTCATCTTAGATAGTG 57.316 33.333 0.00 0.00 0.00 2.74
658 746 9.899226 CATAATTGTCGTCATCTTAGATAGTGA 57.101 33.333 0.00 0.00 0.00 3.41
877 1054 3.847671 TCATATACGCATCACCCCAAA 57.152 42.857 0.00 0.00 0.00 3.28
917 1094 1.144936 AAGGCTAGCTGTGATCGGC 59.855 57.895 15.72 0.00 45.49 5.54
969 1148 1.349357 ACAAGCAAGAAGAGGGGAGAC 59.651 52.381 0.00 0.00 0.00 3.36
988 1167 1.143684 ACACACTTGATTCCCAGTGCT 59.856 47.619 11.29 0.32 35.87 4.40
1056 3269 1.447838 GATCGTGGCCTTCTTCGCA 60.448 57.895 3.32 0.00 0.00 5.10
1167 3380 2.711542 CTTCTCCGGCAAATGTACCTT 58.288 47.619 0.00 0.00 0.00 3.50
1174 3387 1.165270 GCAAATGTACCTTCAGCGGT 58.835 50.000 0.00 0.00 41.10 5.68
1262 3475 1.215382 GCCAAAGATTTCGGGTGCC 59.785 57.895 0.00 0.00 0.00 5.01
1295 3508 4.540824 GACAGAAAATCCAACAACTCAGC 58.459 43.478 0.00 0.00 0.00 4.26
1300 3513 0.396435 ATCCAACAACTCAGCCGTGA 59.604 50.000 0.00 0.00 0.00 4.35
1371 3584 1.006825 CGTCATTCCGTCGCACTCAA 61.007 55.000 0.00 0.00 0.00 3.02
1381 3594 2.553268 GCACTCAAGCTGTCACGC 59.447 61.111 0.00 0.00 0.00 5.34
1438 3651 9.758651 ACTACTGTATCATTTTATATGTTGCGA 57.241 29.630 0.00 0.00 0.00 5.10
1539 3754 5.646360 CAGGTCCGGTTCATTGTACTATTTT 59.354 40.000 0.00 0.00 0.00 1.82
1583 3803 7.427989 TGATAAAATAAAGTACTCCCTCCGT 57.572 36.000 0.00 0.00 0.00 4.69
1584 3804 7.854337 TGATAAAATAAAGTACTCCCTCCGTT 58.146 34.615 0.00 0.00 0.00 4.44
1585 3805 7.983484 TGATAAAATAAAGTACTCCCTCCGTTC 59.017 37.037 0.00 0.00 0.00 3.95
1586 3806 4.750021 AATAAAGTACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 0.00 3.62
1587 3807 2.019807 AAAGTACTCCCTCCGTTCCA 57.980 50.000 0.00 0.00 0.00 3.53
1588 3808 2.249309 AAGTACTCCCTCCGTTCCAT 57.751 50.000 0.00 0.00 0.00 3.41
1589 3809 3.393426 AAGTACTCCCTCCGTTCCATA 57.607 47.619 0.00 0.00 0.00 2.74
1590 3810 3.393426 AGTACTCCCTCCGTTCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
1591 3811 3.924922 AGTACTCCCTCCGTTCCATAAT 58.075 45.455 0.00 0.00 0.00 1.28
1592 3812 5.070823 AGTACTCCCTCCGTTCCATAATA 57.929 43.478 0.00 0.00 0.00 0.98
1593 3813 5.652324 AGTACTCCCTCCGTTCCATAATAT 58.348 41.667 0.00 0.00 0.00 1.28
1594 3814 6.797707 AGTACTCCCTCCGTTCCATAATATA 58.202 40.000 0.00 0.00 0.00 0.86
1595 3815 7.243824 AGTACTCCCTCCGTTCCATAATATAA 58.756 38.462 0.00 0.00 0.00 0.98
1596 3816 6.607004 ACTCCCTCCGTTCCATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
1597 3817 6.320518 ACTCCCTCCGTTCCATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
1598 3818 6.785963 ACTCCCTCCGTTCCATAATATAAGAA 59.214 38.462 0.00 0.00 0.00 2.52
1599 3819 7.458170 ACTCCCTCCGTTCCATAATATAAGAAT 59.542 37.037 0.00 0.00 0.00 2.40
1600 3820 7.620880 TCCCTCCGTTCCATAATATAAGAATG 58.379 38.462 0.00 0.00 0.00 2.67
1601 3821 7.236847 TCCCTCCGTTCCATAATATAAGAATGT 59.763 37.037 0.00 0.00 0.00 2.71
1602 3822 7.883311 CCCTCCGTTCCATAATATAAGAATGTT 59.117 37.037 0.00 0.00 0.00 2.71
1603 3823 9.284968 CCTCCGTTCCATAATATAAGAATGTTT 57.715 33.333 0.00 0.00 0.00 2.83
1616 3836 5.852282 AAGAATGTTTTTGGCACTAGTGT 57.148 34.783 23.44 0.00 0.00 3.55
1617 3837 6.952773 AAGAATGTTTTTGGCACTAGTGTA 57.047 33.333 23.44 10.89 0.00 2.90
1618 3838 6.560253 AGAATGTTTTTGGCACTAGTGTAG 57.440 37.500 23.44 0.00 0.00 2.74
1619 3839 6.062095 AGAATGTTTTTGGCACTAGTGTAGT 58.938 36.000 23.44 0.94 40.28 2.73
1652 3872 9.892130 AACACTCTTATATTTTAGAACAGAGGG 57.108 33.333 0.00 0.00 36.55 4.30
1653 3873 9.268282 ACACTCTTATATTTTAGAACAGAGGGA 57.732 33.333 2.59 0.00 34.50 4.20
1654 3874 9.757227 CACTCTTATATTTTAGAACAGAGGGAG 57.243 37.037 0.00 0.00 32.92 4.30
1655 3875 9.495382 ACTCTTATATTTTAGAACAGAGGGAGT 57.505 33.333 0.00 0.00 32.21 3.85
1658 3878 9.699703 CTTATATTTTAGAACAGAGGGAGTAGC 57.300 37.037 0.00 0.00 0.00 3.58
1659 3879 7.922699 ATATTTTAGAACAGAGGGAGTAGCT 57.077 36.000 0.00 0.00 0.00 3.32
1660 3880 6.628644 ATTTTAGAACAGAGGGAGTAGCTT 57.371 37.500 0.00 0.00 0.00 3.74
1661 3881 6.435292 TTTTAGAACAGAGGGAGTAGCTTT 57.565 37.500 0.00 0.00 0.00 3.51
1662 3882 3.971245 AGAACAGAGGGAGTAGCTTTG 57.029 47.619 0.00 0.00 0.00 2.77
1663 3883 3.243724 AGAACAGAGGGAGTAGCTTTGT 58.756 45.455 0.00 0.00 0.00 2.83
1664 3884 4.417437 AGAACAGAGGGAGTAGCTTTGTA 58.583 43.478 0.00 0.00 0.00 2.41
1665 3885 4.838986 AGAACAGAGGGAGTAGCTTTGTAA 59.161 41.667 0.00 0.00 0.00 2.41
1666 3886 5.485708 AGAACAGAGGGAGTAGCTTTGTAAT 59.514 40.000 0.00 0.00 0.00 1.89
1667 3887 5.091261 ACAGAGGGAGTAGCTTTGTAATG 57.909 43.478 0.00 0.00 0.00 1.90
1668 3888 3.873952 CAGAGGGAGTAGCTTTGTAATGC 59.126 47.826 0.00 0.00 0.00 3.56
1669 3889 3.519510 AGAGGGAGTAGCTTTGTAATGCA 59.480 43.478 0.00 0.00 0.00 3.96
1670 3890 4.019321 AGAGGGAGTAGCTTTGTAATGCAA 60.019 41.667 0.00 0.00 34.87 4.08
1671 3891 4.010349 AGGGAGTAGCTTTGTAATGCAAC 58.990 43.478 0.00 0.00 36.72 4.17
1672 3892 3.181510 GGGAGTAGCTTTGTAATGCAACG 60.182 47.826 0.00 0.00 36.72 4.10
1673 3893 3.181510 GGAGTAGCTTTGTAATGCAACGG 60.182 47.826 0.00 0.00 36.72 4.44
1674 3894 3.408634 AGTAGCTTTGTAATGCAACGGT 58.591 40.909 0.00 0.00 39.73 4.83
1675 3895 3.818773 AGTAGCTTTGTAATGCAACGGTT 59.181 39.130 0.00 0.00 37.97 4.44
1676 3896 4.998672 AGTAGCTTTGTAATGCAACGGTTA 59.001 37.500 0.00 0.00 37.97 2.85
1677 3897 5.646360 AGTAGCTTTGTAATGCAACGGTTAT 59.354 36.000 0.00 0.00 37.97 1.89
1678 3898 4.732784 AGCTTTGTAATGCAACGGTTATG 58.267 39.130 0.00 0.00 34.10 1.90
1679 3899 3.857093 GCTTTGTAATGCAACGGTTATGG 59.143 43.478 0.00 0.00 36.72 2.74
1680 3900 4.617298 GCTTTGTAATGCAACGGTTATGGT 60.617 41.667 0.00 0.00 36.72 3.55
1681 3901 5.392165 GCTTTGTAATGCAACGGTTATGGTA 60.392 40.000 0.00 0.00 36.72 3.25
1682 3902 6.570672 TTTGTAATGCAACGGTTATGGTAA 57.429 33.333 0.00 0.00 36.72 2.85
1683 3903 6.761099 TTGTAATGCAACGGTTATGGTAAT 57.239 33.333 0.00 0.00 31.07 1.89
1684 3904 6.125327 TGTAATGCAACGGTTATGGTAATG 57.875 37.500 0.00 0.00 0.00 1.90
1685 3905 5.880887 TGTAATGCAACGGTTATGGTAATGA 59.119 36.000 0.00 0.00 0.00 2.57
1686 3906 6.544197 TGTAATGCAACGGTTATGGTAATGAT 59.456 34.615 0.00 0.00 0.00 2.45
1687 3907 6.463995 AATGCAACGGTTATGGTAATGATT 57.536 33.333 0.00 0.00 0.00 2.57
1688 3908 5.906113 TGCAACGGTTATGGTAATGATTT 57.094 34.783 0.00 0.00 0.00 2.17
1689 3909 5.645624 TGCAACGGTTATGGTAATGATTTG 58.354 37.500 0.00 0.00 0.00 2.32
1690 3910 5.416013 TGCAACGGTTATGGTAATGATTTGA 59.584 36.000 0.00 0.00 0.00 2.69
1691 3911 6.071896 TGCAACGGTTATGGTAATGATTTGAA 60.072 34.615 0.00 0.00 0.00 2.69
1692 3912 6.809196 GCAACGGTTATGGTAATGATTTGAAA 59.191 34.615 0.00 0.00 0.00 2.69
1693 3913 7.329717 GCAACGGTTATGGTAATGATTTGAAAA 59.670 33.333 0.00 0.00 0.00 2.29
1694 3914 9.197694 CAACGGTTATGGTAATGATTTGAAAAA 57.802 29.630 0.00 0.00 0.00 1.94
1753 3973 5.447279 CCTCCGATTTCATTAACGAAACCAG 60.447 44.000 0.00 0.00 37.69 4.00
1760 3981 4.323417 TCATTAACGAAACCAGATGCACT 58.677 39.130 0.00 0.00 0.00 4.40
1763 3984 1.229428 ACGAAACCAGATGCACTGTG 58.771 50.000 2.76 2.76 44.40 3.66
1764 3985 1.229428 CGAAACCAGATGCACTGTGT 58.771 50.000 9.86 8.94 44.40 3.72
1774 3995 3.313526 AGATGCACTGTGTCAAGTTCAAC 59.686 43.478 9.86 0.00 27.14 3.18
1775 3996 1.396648 TGCACTGTGTCAAGTTCAACG 59.603 47.619 9.86 0.00 0.00 4.10
1777 3998 2.287915 GCACTGTGTCAAGTTCAACGAT 59.712 45.455 9.86 0.00 0.00 3.73
1783 4004 2.158885 TGTCAAGTTCAACGATCCACCA 60.159 45.455 0.00 0.00 0.00 4.17
1784 4005 2.223377 GTCAAGTTCAACGATCCACCAC 59.777 50.000 0.00 0.00 0.00 4.16
1785 4006 1.535462 CAAGTTCAACGATCCACCACC 59.465 52.381 0.00 0.00 0.00 4.61
1786 4007 0.762418 AGTTCAACGATCCACCACCA 59.238 50.000 0.00 0.00 0.00 4.17
1799 4020 3.773119 TCCACCACCACCTAGATCTAAAC 59.227 47.826 3.57 0.00 0.00 2.01
1802 4023 4.081862 CACCACCACCTAGATCTAAACGAA 60.082 45.833 3.57 0.00 0.00 3.85
1803 4024 4.529377 ACCACCACCTAGATCTAAACGAAA 59.471 41.667 3.57 0.00 0.00 3.46
1805 4026 5.337330 CCACCACCTAGATCTAAACGAAACT 60.337 44.000 3.57 0.00 0.00 2.66
1811 4032 8.861101 CACCTAGATCTAAACGAAACTAAACTG 58.139 37.037 3.57 0.00 0.00 3.16
1816 4037 6.764877 TCTAAACGAAACTAAACTGCAGAG 57.235 37.500 23.35 10.28 0.00 3.35
1821 4042 3.678548 CGAAACTAAACTGCAGAGTACCC 59.321 47.826 23.35 5.60 0.00 3.69
1829 4051 3.744660 ACTGCAGAGTACCCAAAGAAAG 58.255 45.455 23.35 0.00 0.00 2.62
1841 4096 2.288395 CCAAAGAAAGGCAGTTCGCAAT 60.288 45.455 0.00 0.00 45.17 3.56
1848 4103 1.009829 GGCAGTTCGCAATAGACCAG 58.990 55.000 0.00 0.00 45.17 4.00
1850 4105 1.661112 GCAGTTCGCAATAGACCAGAC 59.339 52.381 0.00 0.00 41.79 3.51
1852 4107 2.926200 CAGTTCGCAATAGACCAGACAG 59.074 50.000 0.00 0.00 0.00 3.51
1853 4108 1.661112 GTTCGCAATAGACCAGACAGC 59.339 52.381 0.00 0.00 0.00 4.40
1855 4110 1.275010 TCGCAATAGACCAGACAGCAA 59.725 47.619 0.00 0.00 0.00 3.91
1858 4113 3.667960 CGCAATAGACCAGACAGCAAAAC 60.668 47.826 0.00 0.00 0.00 2.43
1859 4114 3.253188 GCAATAGACCAGACAGCAAAACA 59.747 43.478 0.00 0.00 0.00 2.83
1860 4115 4.261572 GCAATAGACCAGACAGCAAAACAA 60.262 41.667 0.00 0.00 0.00 2.83
1861 4116 5.455392 CAATAGACCAGACAGCAAAACAAG 58.545 41.667 0.00 0.00 0.00 3.16
1862 4117 3.004752 AGACCAGACAGCAAAACAAGT 57.995 42.857 0.00 0.00 0.00 3.16
1863 4118 3.356290 AGACCAGACAGCAAAACAAGTT 58.644 40.909 0.00 0.00 0.00 2.66
1864 4119 3.763897 AGACCAGACAGCAAAACAAGTTT 59.236 39.130 0.00 0.00 0.00 2.66
1866 4121 4.494484 ACCAGACAGCAAAACAAGTTTTC 58.506 39.130 7.89 4.43 40.45 2.29
1867 4122 4.021544 ACCAGACAGCAAAACAAGTTTTCA 60.022 37.500 7.89 0.00 40.45 2.69
1868 4123 4.928615 CCAGACAGCAAAACAAGTTTTCAA 59.071 37.500 7.89 0.00 40.45 2.69
1869 4124 5.163963 CCAGACAGCAAAACAAGTTTTCAAC 60.164 40.000 7.89 2.17 40.45 3.18
1871 4126 6.091169 CAGACAGCAAAACAAGTTTTCAACAT 59.909 34.615 7.89 0.00 40.45 2.71
1872 4127 7.275341 CAGACAGCAAAACAAGTTTTCAACATA 59.725 33.333 7.89 0.00 40.45 2.29
1882 4157 3.320826 AGTTTTCAACATAAGGGCCACAC 59.679 43.478 6.18 0.00 0.00 3.82
1887 4162 3.395702 ATAAGGGCCACACGCGGA 61.396 61.111 12.47 0.00 38.94 5.54
1903 4178 1.131315 GCGGACAAAAGATCAAGAGGC 59.869 52.381 0.00 0.00 0.00 4.70
1920 4195 2.818714 CCGCAGCCTCAGCAGAAG 60.819 66.667 0.00 0.00 43.56 2.85
1921 4196 3.497932 CGCAGCCTCAGCAGAAGC 61.498 66.667 0.00 0.00 43.56 3.86
1924 4200 1.924320 GCAGCCTCAGCAGAAGCAAG 61.924 60.000 2.31 0.00 45.49 4.01
1936 4214 5.468072 CAGCAGAAGCAAGAGAAACTAAAGA 59.532 40.000 0.00 0.00 45.49 2.52
1941 4219 9.598517 CAGAAGCAAGAGAAACTAAAGATAGAT 57.401 33.333 0.00 0.00 33.15 1.98
1950 4228 8.012957 AGAAACTAAAGATAGATGATGTCGGT 57.987 34.615 0.00 0.00 33.15 4.69
2020 4303 0.528017 CCTCACTTGCTACTCGCTCA 59.472 55.000 0.00 0.00 40.11 4.26
2035 4318 0.684153 GCTCAATTAGCCTTGCCCCA 60.684 55.000 0.00 0.00 46.25 4.96
2182 4466 2.016961 CATTTCCAGATCGCCCACG 58.983 57.895 0.00 0.00 42.01 4.94
2193 4477 1.153647 CGCCCACGTGATAGCAGAA 60.154 57.895 19.30 0.00 33.53 3.02
2217 4501 5.562298 TCCCAACTAGCACTAGTCTTTTT 57.438 39.130 10.64 0.00 44.96 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 8.652290 GGAGAAGGACATAAGTAAATCATAGGT 58.348 37.037 0.00 0.00 0.00 3.08
43 44 8.023706 GGAAAAATGTCTGAGATTGGTTAGTTC 58.976 37.037 0.34 0.21 0.00 3.01
152 155 6.013206 AGACGGGAGAGTAGATATACAGACAT 60.013 42.308 0.00 0.00 0.00 3.06
170 173 4.610605 TTGACACTATTTTGAGACGGGA 57.389 40.909 0.00 0.00 0.00 5.14
216 221 8.902540 AACGCATGAAGATATTAATACTTCCA 57.097 30.769 21.86 15.46 39.14 3.53
220 225 7.450074 TGGGAACGCATGAAGATATTAATACT 58.550 34.615 0.00 0.00 0.00 2.12
221 226 7.667043 TGGGAACGCATGAAGATATTAATAC 57.333 36.000 0.00 0.00 0.00 1.89
222 227 8.100164 TCATGGGAACGCATGAAGATATTAATA 58.900 33.333 24.70 0.00 40.90 0.98
250 255 3.622826 ACCCGTGCGGTGCTAGTT 61.623 61.111 9.90 0.00 46.09 2.24
262 267 3.555966 ACTATACTAGCCGTAAACCCGT 58.444 45.455 0.00 0.00 0.00 5.28
264 269 7.745620 TTACTACTATACTAGCCGTAAACCC 57.254 40.000 0.00 0.00 0.00 4.11
301 306 4.400120 TGGCCTTTTAGGTTTATCGTGTT 58.600 39.130 3.32 0.00 37.80 3.32
302 307 4.023726 TGGCCTTTTAGGTTTATCGTGT 57.976 40.909 3.32 0.00 37.80 4.49
303 308 5.124776 TGAATGGCCTTTTAGGTTTATCGTG 59.875 40.000 3.32 0.00 37.80 4.35
304 309 5.124936 GTGAATGGCCTTTTAGGTTTATCGT 59.875 40.000 3.32 0.00 37.80 3.73
305 310 5.578776 GTGAATGGCCTTTTAGGTTTATCG 58.421 41.667 3.32 0.00 37.80 2.92
306 311 5.124936 ACGTGAATGGCCTTTTAGGTTTATC 59.875 40.000 13.57 0.00 37.80 1.75
307 312 5.014202 ACGTGAATGGCCTTTTAGGTTTAT 58.986 37.500 13.57 0.00 37.80 1.40
308 313 4.400120 ACGTGAATGGCCTTTTAGGTTTA 58.600 39.130 13.57 0.00 37.80 2.01
309 314 3.227614 ACGTGAATGGCCTTTTAGGTTT 58.772 40.909 13.57 0.00 37.80 3.27
310 315 2.871453 ACGTGAATGGCCTTTTAGGTT 58.129 42.857 13.57 2.02 37.80 3.50
312 317 2.094752 CCAACGTGAATGGCCTTTTAGG 60.095 50.000 3.32 9.29 38.80 2.69
313 318 3.216147 CCAACGTGAATGGCCTTTTAG 57.784 47.619 3.32 2.36 0.00 1.85
321 326 1.605202 CCCTTTTGCCAACGTGAATGG 60.605 52.381 0.10 0.10 41.08 3.16
323 328 1.408969 ACCCTTTTGCCAACGTGAAT 58.591 45.000 0.00 0.00 0.00 2.57
344 349 3.621268 TCGAGAAAATATCGCCAAACAGG 59.379 43.478 0.00 0.00 39.98 4.00
347 352 5.006746 AGTCATCGAGAAAATATCGCCAAAC 59.993 40.000 0.00 0.00 39.98 2.93
363 368 7.387119 ACAGTACTATTTGTGTAGTCATCGA 57.613 36.000 0.00 0.00 36.39 3.59
364 369 8.769396 CTACAGTACTATTTGTGTAGTCATCG 57.231 38.462 0.00 0.00 38.28 3.84
405 410 1.226746 GCGGCGCAAGGAACTATATT 58.773 50.000 29.21 0.00 38.49 1.28
407 412 0.108089 TTGCGGCGCAAGGAACTATA 60.108 50.000 40.01 18.12 43.99 1.31
408 413 1.376683 TTGCGGCGCAAGGAACTAT 60.377 52.632 40.01 0.00 43.99 2.12
409 414 2.031314 TTGCGGCGCAAGGAACTA 59.969 55.556 40.01 19.72 43.99 2.24
452 487 2.851104 CACGGTCGGCGAAAAGTC 59.149 61.111 12.92 0.00 0.00 3.01
453 488 3.343421 GCACGGTCGGCGAAAAGT 61.343 61.111 12.92 9.40 0.00 2.66
454 489 3.295228 CTGCACGGTCGGCGAAAAG 62.295 63.158 12.92 8.67 0.00 2.27
455 490 3.342627 CTGCACGGTCGGCGAAAA 61.343 61.111 12.92 0.00 0.00 2.29
659 747 9.676195 GGCTTGCTACTAGTACTAATTAACTAC 57.324 37.037 3.76 0.00 0.00 2.73
917 1094 0.591741 GTACGGCTCGATCAACTCCG 60.592 60.000 10.04 10.04 45.04 4.63
969 1148 1.808945 GAGCACTGGGAATCAAGTGTG 59.191 52.381 14.18 4.53 35.00 3.82
988 1167 1.950216 CCTTGTCATCCTCGATCGAGA 59.050 52.381 39.64 27.10 44.53 4.04
1262 3475 0.243907 TTTTCTGTCGCTCTCTCCCG 59.756 55.000 0.00 0.00 0.00 5.14
1269 3482 3.251004 AGTTGTTGGATTTTCTGTCGCTC 59.749 43.478 0.00 0.00 0.00 5.03
1270 3483 3.214328 AGTTGTTGGATTTTCTGTCGCT 58.786 40.909 0.00 0.00 0.00 4.93
1271 3484 3.003275 TGAGTTGTTGGATTTTCTGTCGC 59.997 43.478 0.00 0.00 0.00 5.19
1295 3508 7.219154 CGCTATAAGATTTCTATAAGCTCACGG 59.781 40.741 0.00 0.00 0.00 4.94
1300 3513 7.543868 CAGCACGCTATAAGATTTCTATAAGCT 59.456 37.037 0.00 0.00 0.00 3.74
1312 3525 2.093711 TGAAAGGCAGCACGCTATAAGA 60.094 45.455 0.00 0.00 41.91 2.10
1381 3594 4.495422 AGCACTACTTCGACCATTAACTG 58.505 43.478 0.00 0.00 0.00 3.16
1430 3643 7.145985 ACGATAGACTATACAAATCGCAACAT 58.854 34.615 0.00 0.00 42.31 2.71
1560 3780 7.440556 GGAACGGAGGGAGTACTTTATTTTATC 59.559 40.741 0.00 0.00 0.00 1.75
1569 3789 2.249309 ATGGAACGGAGGGAGTACTT 57.751 50.000 0.00 0.00 0.00 2.24
1570 3790 3.393426 TTATGGAACGGAGGGAGTACT 57.607 47.619 0.00 0.00 0.00 2.73
1571 3791 5.997384 ATATTATGGAACGGAGGGAGTAC 57.003 43.478 0.00 0.00 0.00 2.73
1572 3792 7.472741 TCTTATATTATGGAACGGAGGGAGTA 58.527 38.462 0.00 0.00 0.00 2.59
1573 3793 6.320518 TCTTATATTATGGAACGGAGGGAGT 58.679 40.000 0.00 0.00 0.00 3.85
1574 3794 6.852420 TCTTATATTATGGAACGGAGGGAG 57.148 41.667 0.00 0.00 0.00 4.30
1575 3795 7.236847 ACATTCTTATATTATGGAACGGAGGGA 59.763 37.037 0.00 0.00 0.00 4.20
1576 3796 7.394816 ACATTCTTATATTATGGAACGGAGGG 58.605 38.462 0.00 0.00 0.00 4.30
1577 3797 8.848474 AACATTCTTATATTATGGAACGGAGG 57.152 34.615 0.00 0.00 0.00 4.30
1590 3810 9.243105 ACACTAGTGCCAAAAACATTCTTATAT 57.757 29.630 22.90 0.00 0.00 0.86
1591 3811 8.630054 ACACTAGTGCCAAAAACATTCTTATA 57.370 30.769 22.90 0.00 0.00 0.98
1592 3812 7.524717 ACACTAGTGCCAAAAACATTCTTAT 57.475 32.000 22.90 0.00 0.00 1.73
1593 3813 6.952773 ACACTAGTGCCAAAAACATTCTTA 57.047 33.333 22.90 0.00 0.00 2.10
1594 3814 5.852282 ACACTAGTGCCAAAAACATTCTT 57.148 34.783 22.90 0.00 0.00 2.52
1595 3815 6.062095 ACTACACTAGTGCCAAAAACATTCT 58.938 36.000 22.90 0.96 37.69 2.40
1596 3816 6.313744 ACTACACTAGTGCCAAAAACATTC 57.686 37.500 22.90 0.00 37.69 2.67
1626 3846 9.892130 CCCTCTGTTCTAAAATATAAGAGTGTT 57.108 33.333 0.00 0.00 0.00 3.32
1627 3847 9.268282 TCCCTCTGTTCTAAAATATAAGAGTGT 57.732 33.333 0.00 0.00 0.00 3.55
1628 3848 9.757227 CTCCCTCTGTTCTAAAATATAAGAGTG 57.243 37.037 0.00 0.00 0.00 3.51
1629 3849 9.495382 ACTCCCTCTGTTCTAAAATATAAGAGT 57.505 33.333 0.00 0.00 0.00 3.24
1632 3852 9.699703 GCTACTCCCTCTGTTCTAAAATATAAG 57.300 37.037 0.00 0.00 0.00 1.73
1633 3853 9.435570 AGCTACTCCCTCTGTTCTAAAATATAA 57.564 33.333 0.00 0.00 0.00 0.98
1634 3854 9.435570 AAGCTACTCCCTCTGTTCTAAAATATA 57.564 33.333 0.00 0.00 0.00 0.86
1635 3855 7.922699 AGCTACTCCCTCTGTTCTAAAATAT 57.077 36.000 0.00 0.00 0.00 1.28
1636 3856 7.735326 AAGCTACTCCCTCTGTTCTAAAATA 57.265 36.000 0.00 0.00 0.00 1.40
1637 3857 6.628644 AAGCTACTCCCTCTGTTCTAAAAT 57.371 37.500 0.00 0.00 0.00 1.82
1638 3858 6.183361 ACAAAGCTACTCCCTCTGTTCTAAAA 60.183 38.462 0.00 0.00 0.00 1.52
1639 3859 5.307196 ACAAAGCTACTCCCTCTGTTCTAAA 59.693 40.000 0.00 0.00 0.00 1.85
1640 3860 4.838986 ACAAAGCTACTCCCTCTGTTCTAA 59.161 41.667 0.00 0.00 0.00 2.10
1641 3861 4.417437 ACAAAGCTACTCCCTCTGTTCTA 58.583 43.478 0.00 0.00 0.00 2.10
1642 3862 3.243724 ACAAAGCTACTCCCTCTGTTCT 58.756 45.455 0.00 0.00 0.00 3.01
1643 3863 3.686916 ACAAAGCTACTCCCTCTGTTC 57.313 47.619 0.00 0.00 0.00 3.18
1644 3864 5.491982 CATTACAAAGCTACTCCCTCTGTT 58.508 41.667 0.00 0.00 0.00 3.16
1645 3865 4.624125 GCATTACAAAGCTACTCCCTCTGT 60.624 45.833 0.00 0.00 0.00 3.41
1646 3866 3.873952 GCATTACAAAGCTACTCCCTCTG 59.126 47.826 0.00 0.00 0.00 3.35
1647 3867 3.519510 TGCATTACAAAGCTACTCCCTCT 59.480 43.478 0.00 0.00 0.00 3.69
1648 3868 3.873910 TGCATTACAAAGCTACTCCCTC 58.126 45.455 0.00 0.00 0.00 4.30
1649 3869 4.010349 GTTGCATTACAAAGCTACTCCCT 58.990 43.478 0.00 0.00 40.82 4.20
1650 3870 3.181510 CGTTGCATTACAAAGCTACTCCC 60.182 47.826 0.00 0.00 40.82 4.30
1651 3871 3.181510 CCGTTGCATTACAAAGCTACTCC 60.182 47.826 0.00 0.00 40.82 3.85
1652 3872 3.435671 ACCGTTGCATTACAAAGCTACTC 59.564 43.478 0.00 0.00 40.82 2.59
1653 3873 3.408634 ACCGTTGCATTACAAAGCTACT 58.591 40.909 0.00 0.00 40.82 2.57
1654 3874 3.824414 ACCGTTGCATTACAAAGCTAC 57.176 42.857 0.00 0.00 40.82 3.58
1655 3875 5.163703 CCATAACCGTTGCATTACAAAGCTA 60.164 40.000 0.00 0.00 40.82 3.32
1656 3876 4.380444 CCATAACCGTTGCATTACAAAGCT 60.380 41.667 0.00 0.00 40.82 3.74
1657 3877 3.857093 CCATAACCGTTGCATTACAAAGC 59.143 43.478 0.00 0.00 40.82 3.51
1658 3878 5.054390 ACCATAACCGTTGCATTACAAAG 57.946 39.130 0.00 0.00 40.82 2.77
1659 3879 6.570672 TTACCATAACCGTTGCATTACAAA 57.429 33.333 0.00 0.00 40.82 2.83
1660 3880 6.374613 TCATTACCATAACCGTTGCATTACAA 59.625 34.615 0.00 0.00 35.33 2.41
1661 3881 5.880887 TCATTACCATAACCGTTGCATTACA 59.119 36.000 0.00 0.00 0.00 2.41
1662 3882 6.366315 TCATTACCATAACCGTTGCATTAC 57.634 37.500 0.00 0.00 0.00 1.89
1663 3883 7.575414 AATCATTACCATAACCGTTGCATTA 57.425 32.000 0.00 0.00 0.00 1.90
1664 3884 6.463995 AATCATTACCATAACCGTTGCATT 57.536 33.333 0.00 0.00 0.00 3.56
1665 3885 6.096141 TCAAATCATTACCATAACCGTTGCAT 59.904 34.615 0.00 0.00 0.00 3.96
1666 3886 5.416013 TCAAATCATTACCATAACCGTTGCA 59.584 36.000 0.00 0.00 0.00 4.08
1667 3887 5.885881 TCAAATCATTACCATAACCGTTGC 58.114 37.500 0.00 0.00 0.00 4.17
1668 3888 8.749841 TTTTCAAATCATTACCATAACCGTTG 57.250 30.769 0.00 0.00 0.00 4.10
1701 3921 4.356405 CCCCCTCTTTTGCTCAATTTTT 57.644 40.909 0.00 0.00 0.00 1.94
1726 3946 2.502538 TCGTTAATGAAATCGGAGGGGT 59.497 45.455 0.00 0.00 0.00 4.95
1753 3973 3.621794 GTTGAACTTGACACAGTGCATC 58.378 45.455 0.00 0.00 31.90 3.91
1760 3981 2.869801 GTGGATCGTTGAACTTGACACA 59.130 45.455 0.00 0.00 0.00 3.72
1763 3984 2.223377 GTGGTGGATCGTTGAACTTGAC 59.777 50.000 0.00 0.00 0.00 3.18
1764 3985 2.489971 GTGGTGGATCGTTGAACTTGA 58.510 47.619 0.00 0.00 0.00 3.02
1774 3995 1.341531 GATCTAGGTGGTGGTGGATCG 59.658 57.143 0.00 0.00 0.00 3.69
1775 3996 2.683768 AGATCTAGGTGGTGGTGGATC 58.316 52.381 0.00 0.00 0.00 3.36
1777 3998 3.769189 TTAGATCTAGGTGGTGGTGGA 57.231 47.619 2.02 0.00 0.00 4.02
1783 4004 5.997384 AGTTTCGTTTAGATCTAGGTGGT 57.003 39.130 2.02 0.00 0.00 4.16
1784 4005 8.033626 AGTTTAGTTTCGTTTAGATCTAGGTGG 58.966 37.037 2.02 0.00 0.00 4.61
1785 4006 8.861101 CAGTTTAGTTTCGTTTAGATCTAGGTG 58.139 37.037 2.02 0.00 0.00 4.00
1786 4007 7.544915 GCAGTTTAGTTTCGTTTAGATCTAGGT 59.455 37.037 2.02 0.00 0.00 3.08
1799 4020 3.678548 GGGTACTCTGCAGTTTAGTTTCG 59.321 47.826 14.67 0.00 33.62 3.46
1802 4023 4.699925 TTGGGTACTCTGCAGTTTAGTT 57.300 40.909 14.67 0.00 33.62 2.24
1803 4024 4.347000 TCTTTGGGTACTCTGCAGTTTAGT 59.653 41.667 14.67 12.53 33.62 2.24
1805 4026 4.967084 TCTTTGGGTACTCTGCAGTTTA 57.033 40.909 14.67 3.21 33.62 2.01
1811 4032 1.813178 GCCTTTCTTTGGGTACTCTGC 59.187 52.381 0.00 0.00 0.00 4.26
1816 4037 2.225727 CGAACTGCCTTTCTTTGGGTAC 59.774 50.000 0.00 0.00 0.00 3.34
1821 4042 2.490328 TTGCGAACTGCCTTTCTTTG 57.510 45.000 0.00 0.00 45.60 2.77
1829 4051 1.009829 CTGGTCTATTGCGAACTGCC 58.990 55.000 0.00 0.00 45.60 4.85
1841 4096 4.150897 ACTTGTTTTGCTGTCTGGTCTA 57.849 40.909 0.00 0.00 0.00 2.59
1862 4117 2.294791 CGTGTGGCCCTTATGTTGAAAA 59.705 45.455 0.00 0.00 0.00 2.29
1863 4118 1.883275 CGTGTGGCCCTTATGTTGAAA 59.117 47.619 0.00 0.00 0.00 2.69
1864 4119 1.529226 CGTGTGGCCCTTATGTTGAA 58.471 50.000 0.00 0.00 0.00 2.69
1866 4121 1.506262 GCGTGTGGCCCTTATGTTG 59.494 57.895 0.00 0.00 34.80 3.33
1867 4122 2.038269 CGCGTGTGGCCCTTATGTT 61.038 57.895 0.00 0.00 38.94 2.71
1868 4123 2.435938 CGCGTGTGGCCCTTATGT 60.436 61.111 0.00 0.00 38.94 2.29
1869 4124 3.202001 CCGCGTGTGGCCCTTATG 61.202 66.667 4.92 0.00 38.94 1.90
1871 4126 4.382320 GTCCGCGTGTGGCCCTTA 62.382 66.667 4.92 0.00 38.94 2.69
1882 4157 1.394917 CCTCTTGATCTTTTGTCCGCG 59.605 52.381 0.00 0.00 0.00 6.46
1887 4162 1.168714 GCGGCCTCTTGATCTTTTGT 58.831 50.000 0.00 0.00 0.00 2.83
1903 4178 2.818714 CTTCTGCTGAGGCTGCGG 60.819 66.667 0.00 0.00 39.59 5.69
1920 4195 9.323985 ACATCATCTATCTTTAGTTTCTCTTGC 57.676 33.333 0.00 0.00 0.00 4.01
1924 4200 8.138712 ACCGACATCATCTATCTTTAGTTTCTC 58.861 37.037 0.00 0.00 0.00 2.87
1936 4214 5.048364 GCTGAACTAGACCGACATCATCTAT 60.048 44.000 0.00 0.00 0.00 1.98
1941 4219 1.476891 GGCTGAACTAGACCGACATCA 59.523 52.381 0.00 0.00 0.00 3.07
1944 4222 1.880894 CGGCTGAACTAGACCGACA 59.119 57.895 0.00 0.00 43.92 4.35
1950 4228 1.079819 GTGCTGCGGCTGAACTAGA 60.080 57.895 20.27 0.00 39.59 2.43
2020 4303 2.595558 GCTTGGGGCAAGGCTAATT 58.404 52.632 0.00 0.00 41.31 1.40
2035 4318 4.520492 CCAGAACAAAACCTACTGATGCTT 59.480 41.667 0.00 0.00 0.00 3.91
2182 4466 4.513318 GCTAGTTGGGATTTCTGCTATCAC 59.487 45.833 0.00 0.00 0.00 3.06
2193 4477 5.763876 AAAGACTAGTGCTAGTTGGGATT 57.236 39.130 12.51 3.02 45.63 3.01



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.