Multiple sequence alignment - TraesCS7A01G196300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G196300 chr7A 100.000 6024 0 0 1 6024 156111108 156117131 0.000000e+00 11125.0
1 TraesCS7A01G196300 chr7A 96.552 174 5 1 4725 4898 709731059 709731231 2.750000e-73 287.0
2 TraesCS7A01G196300 chr7A 94.048 168 8 2 2274 2441 451519807 451519972 2.790000e-63 254.0
3 TraesCS7A01G196300 chr7D 94.674 3004 107 18 1742 4731 154185367 154188331 0.000000e+00 4612.0
4 TraesCS7A01G196300 chr7D 91.118 1700 62 39 573 2205 154183691 154185368 0.000000e+00 2220.0
5 TraesCS7A01G196300 chr7D 93.719 1003 38 10 4897 5898 154188333 154189311 0.000000e+00 1480.0
6 TraesCS7A01G196300 chr7D 97.126 174 2 3 4732 4905 312574292 312574122 2.120000e-74 291.0
7 TraesCS7A01G196300 chr7D 97.647 170 2 2 4729 4897 363149001 363148833 2.120000e-74 291.0
8 TraesCS7A01G196300 chr7D 97.076 171 3 2 4727 4897 164852928 164852760 2.750000e-73 287.0
9 TraesCS7A01G196300 chr7D 94.643 168 7 2 2274 2441 397555081 397554916 5.990000e-65 259.0
10 TraesCS7A01G196300 chr7D 84.293 191 21 6 2018 2205 445904063 445903879 1.730000e-40 178.0
11 TraesCS7A01G196300 chr7B 95.957 2300 65 8 2438 4731 116387071 116389348 0.000000e+00 3707.0
12 TraesCS7A01G196300 chr7B 92.662 1390 52 23 720 2084 116384942 116386306 0.000000e+00 1956.0
13 TraesCS7A01G196300 chr7B 96.610 649 20 1 4897 5545 116389350 116389996 0.000000e+00 1075.0
14 TraesCS7A01G196300 chr7B 90.876 548 36 6 1742 2280 116386532 116387074 0.000000e+00 723.0
15 TraesCS7A01G196300 chr7B 96.380 221 6 1 5680 5900 116389996 116390214 4.440000e-96 363.0
16 TraesCS7A01G196300 chr7B 86.217 341 27 9 1 336 116383222 116383547 9.610000e-93 351.0
17 TraesCS7A01G196300 chr7B 90.066 151 14 1 421 570 217461817 217461667 1.710000e-45 195.0
18 TraesCS7A01G196300 chr7B 88.961 154 14 3 420 572 119234484 119234333 2.870000e-43 187.0
19 TraesCS7A01G196300 chr7B 97.115 104 3 0 5921 6024 116390302 116390405 6.210000e-40 176.0
20 TraesCS7A01G196300 chr7B 85.714 161 20 3 2036 2194 70430106 70429947 3.730000e-37 167.0
21 TraesCS7A01G196300 chr4D 84.948 764 88 17 981 1740 502533187 502533927 0.000000e+00 749.0
22 TraesCS7A01G196300 chr4D 84.122 592 71 12 2657 3225 502534468 502535059 8.820000e-153 551.0
23 TraesCS7A01G196300 chr4D 96.133 181 4 3 4732 4912 93336684 93336861 5.910000e-75 292.0
24 TraesCS7A01G196300 chr4D 95.122 164 7 1 2279 2442 64390471 64390633 2.150000e-64 257.0
25 TraesCS7A01G196300 chr4D 94.611 167 8 1 2278 2444 334164553 334164388 2.150000e-64 257.0
26 TraesCS7A01G196300 chr4D 88.272 162 16 2 421 579 331709960 331709799 2.220000e-44 191.0
27 TraesCS7A01G196300 chr4D 81.212 165 26 4 4926 5090 502536031 502536190 1.760000e-25 128.0
28 TraesCS7A01G196300 chr5A 83.658 771 101 21 981 1740 685865729 685866485 0.000000e+00 702.0
29 TraesCS7A01G196300 chr5A 82.380 647 76 23 2591 3225 685866823 685867443 4.130000e-146 529.0
30 TraesCS7A01G196300 chr5A 83.023 483 58 11 3375 3837 685867458 685867936 3.360000e-112 416.0
31 TraesCS7A01G196300 chr5A 95.266 169 6 2 2273 2441 320214410 320214244 3.580000e-67 267.0
32 TraesCS7A01G196300 chr4B 93.458 214 11 3 3605 3816 211583904 211584116 1.260000e-81 315.0
33 TraesCS7A01G196300 chr4B 94.022 184 9 2 4729 4911 567001875 567001693 1.650000e-70 278.0
34 TraesCS7A01G196300 chr4B 94.048 168 7 3 2274 2441 532435166 532435002 1.000000e-62 252.0
35 TraesCS7A01G196300 chr5D 96.067 178 6 1 4731 4908 5112351 5112175 7.640000e-74 289.0
36 TraesCS7A01G196300 chr5D 97.633 169 3 1 4730 4898 42949726 42949559 7.640000e-74 289.0
37 TraesCS7A01G196300 chr5D 92.708 192 12 2 4720 4910 559625946 559625756 5.950000e-70 276.0
38 TraesCS7A01G196300 chr5D 80.934 257 34 10 5543 5796 368246845 368246601 7.970000e-44 189.0
39 TraesCS7A01G196300 chr3D 94.048 168 9 1 2274 2441 87926166 87926000 2.790000e-63 254.0
40 TraesCS7A01G196300 chr3D 84.753 223 25 9 3600 3819 421608280 421608064 1.310000e-51 215.0
41 TraesCS7A01G196300 chr2D 94.048 168 9 1 2276 2443 387193692 387193858 2.790000e-63 254.0
42 TraesCS7A01G196300 chr6D 84.298 242 25 5 5541 5780 440639496 440639726 2.180000e-54 224.0
43 TraesCS7A01G196300 chr6A 82.609 253 31 5 5541 5791 588600886 588601127 1.700000e-50 211.0
44 TraesCS7A01G196300 chr1D 91.083 157 12 2 2050 2205 21822472 21822317 1.700000e-50 211.0
45 TraesCS7A01G196300 chr2B 91.503 153 12 1 421 572 451836875 451836723 6.120000e-50 209.0
46 TraesCS7A01G196300 chr2B 90.476 147 12 2 2049 2194 357884360 357884505 6.160000e-45 193.0
47 TraesCS7A01G196300 chr3B 90.909 154 12 2 421 573 519399234 519399082 7.910000e-49 206.0
48 TraesCS7A01G196300 chr3B 88.889 162 13 3 419 578 493121720 493121878 1.710000e-45 195.0
49 TraesCS7A01G196300 chr3B 91.791 134 10 1 2050 2182 324234831 324234698 1.030000e-42 185.0
50 TraesCS7A01G196300 chr3B 82.439 205 26 3 5578 5781 685258395 685258200 2.890000e-38 171.0
51 TraesCS7A01G196300 chr3B 84.483 58 4 5 2247 2303 422508943 422508996 1.100000e-02 52.8
52 TraesCS7A01G196300 chr6B 89.677 155 14 1 421 573 352091630 352091784 4.760000e-46 196.0
53 TraesCS7A01G196300 chr6B 88.125 160 17 1 421 578 439062243 439062084 7.970000e-44 189.0
54 TraesCS7A01G196300 chr5B 89.241 158 15 2 2049 2205 512581639 512581483 4.760000e-46 196.0
55 TraesCS7A01G196300 chr5B 81.323 257 32 8 5543 5796 436165149 436164906 1.710000e-45 195.0
56 TraesCS7A01G196300 chr5B 88.742 151 16 1 421 571 158726511 158726362 3.710000e-42 183.0
57 TraesCS7A01G196300 chr5B 81.013 237 33 5 5558 5793 581133005 581132780 1.730000e-40 178.0
58 TraesCS7A01G196300 chr3A 80.952 252 39 6 5541 5791 744684584 744684827 2.220000e-44 191.0
59 TraesCS7A01G196300 chr1A 100.000 31 0 0 338 368 59888563 59888593 2.350000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G196300 chr7A 156111108 156117131 6023 False 11125.000000 11125 100.000000 1 6024 1 chr7A.!!$F1 6023
1 TraesCS7A01G196300 chr7D 154183691 154189311 5620 False 2770.666667 4612 93.170333 573 5898 3 chr7D.!!$F1 5325
2 TraesCS7A01G196300 chr7B 116383222 116390405 7183 False 1193.000000 3707 93.688143 1 6024 7 chr7B.!!$F1 6023
3 TraesCS7A01G196300 chr4D 502533187 502536190 3003 False 476.000000 749 83.427333 981 5090 3 chr4D.!!$F3 4109
4 TraesCS7A01G196300 chr5A 685865729 685867936 2207 False 549.000000 702 83.020333 981 3837 3 chr5A.!!$F1 2856

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
413 419 0.108377 GGGCCGGGCTTAAATGTTTG 60.108 55.000 28.80 0.0 0.00 2.93 F
414 420 0.108377 GGCCGGGCTTAAATGTTTGG 60.108 55.000 22.87 0.0 0.00 3.28 F
1482 2621 0.109723 TCAAGCAGGTTGGTACACCC 59.890 55.000 12.42 0.0 43.29 4.61 F
3240 5125 1.209504 GGGCTATGTGGTAGTTGCTCA 59.790 52.381 0.00 0.0 32.72 4.26 F
4038 5963 0.248289 GAATTGCCCACAGCTTGCAT 59.752 50.000 0.00 0.0 44.23 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1564 2703 0.038744 AAATGGCCAGTCCCAGTCTG 59.961 55.000 13.05 0.0 38.50 3.51 R
1716 2855 1.307084 GTACCCCCTGAGAAGCCCT 60.307 63.158 0.00 0.0 0.00 5.19 R
3291 5176 2.106166 AGATAGGAATGCAGCTCCTTGG 59.894 50.000 21.79 0.0 40.61 3.61 R
4351 6276 0.388134 CACGTGGTTCCGAGTACTGG 60.388 60.000 7.95 0.0 0.00 4.00 R
5901 8064 0.037605 GGAAAGGCCGTCTCTTTCGA 60.038 55.000 9.09 0.0 46.50 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 76 2.511218 ACTAGGGATGAATGTGGCACAT 59.489 45.455 26.78 26.78 44.52 3.21
74 77 3.716353 ACTAGGGATGAATGTGGCACATA 59.284 43.478 31.58 18.72 44.52 2.29
75 78 2.936202 AGGGATGAATGTGGCACATAC 58.064 47.619 31.58 21.32 44.52 2.39
76 79 2.511218 AGGGATGAATGTGGCACATACT 59.489 45.455 31.58 18.52 44.52 2.12
77 80 2.620115 GGGATGAATGTGGCACATACTG 59.380 50.000 31.58 0.00 44.52 2.74
78 81 2.033801 GGATGAATGTGGCACATACTGC 59.966 50.000 31.58 19.83 44.52 4.40
92 95 7.038926 GCACATACTGCGAGTAGTAATAATG 57.961 40.000 5.23 3.39 36.78 1.90
93 96 6.861572 GCACATACTGCGAGTAGTAATAATGA 59.138 38.462 5.23 0.00 36.78 2.57
94 97 7.542477 GCACATACTGCGAGTAGTAATAATGAT 59.458 37.037 5.23 0.00 36.78 2.45
172 175 4.348754 CCCATTAAAGGCCATGATCCATTT 59.651 41.667 5.01 0.00 0.00 2.32
174 177 4.916983 TTAAAGGCCATGATCCATTTCG 57.083 40.909 5.01 0.00 0.00 3.46
214 217 6.755542 AAAAAGGTTATTCATCCCCAACAA 57.244 33.333 0.00 0.00 0.00 2.83
215 218 6.950860 AAAAGGTTATTCATCCCCAACAAT 57.049 33.333 0.00 0.00 0.00 2.71
216 219 5.937975 AAGGTTATTCATCCCCAACAATG 57.062 39.130 0.00 0.00 0.00 2.82
274 279 9.502145 TCATTTTTCTTCGGAAATGATAAATCG 57.498 29.630 7.25 0.00 43.52 3.34
279 284 5.465390 TCTTCGGAAATGATAAATCGCGAAT 59.535 36.000 15.24 0.00 30.90 3.34
281 286 4.509970 TCGGAAATGATAAATCGCGAATGT 59.490 37.500 15.24 3.07 0.00 2.71
283 288 5.336990 CGGAAATGATAAATCGCGAATGTTC 59.663 40.000 15.24 9.20 0.00 3.18
301 307 3.119531 TGTTCGGATTTTAAGCATGGCAG 60.120 43.478 0.00 0.00 0.00 4.85
308 314 2.042686 TTAAGCATGGCAGCTCGAAT 57.957 45.000 11.02 0.50 45.89 3.34
317 323 2.557924 TGGCAGCTCGAATGTTTTTCAT 59.442 40.909 0.00 0.00 38.57 2.57
320 326 3.366273 GCAGCTCGAATGTTTTTCATGGA 60.366 43.478 0.00 0.00 36.81 3.41
336 342 3.500680 TCATGGAAACTTTAGTTCACGCC 59.499 43.478 0.00 0.00 37.25 5.68
337 343 3.202829 TGGAAACTTTAGTTCACGCCT 57.797 42.857 0.00 0.00 37.25 5.52
338 344 4.339872 TGGAAACTTTAGTTCACGCCTA 57.660 40.909 0.00 0.00 37.25 3.93
339 345 4.706035 TGGAAACTTTAGTTCACGCCTAA 58.294 39.130 0.00 0.00 37.25 2.69
340 346 5.124645 TGGAAACTTTAGTTCACGCCTAAA 58.875 37.500 0.00 0.00 37.25 1.85
341 347 5.007921 TGGAAACTTTAGTTCACGCCTAAAC 59.992 40.000 0.00 0.00 37.25 2.01
343 349 4.347360 ACTTTAGTTCACGCCTAAACCT 57.653 40.909 0.00 0.00 32.49 3.50
344 350 4.062991 ACTTTAGTTCACGCCTAAACCTG 58.937 43.478 0.00 0.00 32.49 4.00
345 351 4.202284 ACTTTAGTTCACGCCTAAACCTGA 60.202 41.667 0.00 0.00 32.49 3.86
346 352 4.546829 TTAGTTCACGCCTAAACCTGAT 57.453 40.909 0.00 0.00 0.00 2.90
347 353 2.973945 AGTTCACGCCTAAACCTGATC 58.026 47.619 0.00 0.00 0.00 2.92
348 354 2.301870 AGTTCACGCCTAAACCTGATCA 59.698 45.455 0.00 0.00 0.00 2.92
353 359 2.026262 ACGCCTAAACCTGATCATTGGT 60.026 45.455 0.00 0.00 38.35 3.67
354 360 2.614057 CGCCTAAACCTGATCATTGGTC 59.386 50.000 7.08 0.00 35.17 4.02
355 361 2.614057 GCCTAAACCTGATCATTGGTCG 59.386 50.000 7.08 0.55 35.17 4.79
356 362 3.206150 CCTAAACCTGATCATTGGTCGG 58.794 50.000 7.08 0.00 35.17 4.79
357 363 2.128771 AAACCTGATCATTGGTCGGG 57.871 50.000 21.16 21.16 45.74 5.14
358 364 0.394352 AACCTGATCATTGGTCGGGC 60.394 55.000 22.42 0.00 44.42 6.13
359 365 1.526917 CCTGATCATTGGTCGGGCC 60.527 63.158 11.86 0.00 35.47 5.80
361 367 2.591715 GATCATTGGTCGGGCCGG 60.592 66.667 27.98 8.88 41.21 6.13
362 368 4.189580 ATCATTGGTCGGGCCGGG 62.190 66.667 27.98 9.05 41.21 5.73
387 393 4.623002 TGGGACAAAAACGAATTTAAGCC 58.377 39.130 0.00 0.00 31.92 4.35
388 394 3.671459 GGGACAAAAACGAATTTAAGCCG 59.329 43.478 0.00 0.00 0.00 5.52
389 395 3.671459 GGACAAAAACGAATTTAAGCCGG 59.329 43.478 0.00 0.00 0.00 6.13
390 396 3.644823 ACAAAAACGAATTTAAGCCGGG 58.355 40.909 2.18 0.00 0.00 5.73
391 397 2.357327 AAAACGAATTTAAGCCGGGC 57.643 45.000 12.11 12.11 0.00 6.13
392 398 1.541379 AAACGAATTTAAGCCGGGCT 58.459 45.000 17.69 17.69 42.56 5.19
407 413 2.678580 GCTTGGGCCGGGCTTAAA 60.679 61.111 28.80 17.98 0.00 1.52
408 414 2.058001 GCTTGGGCCGGGCTTAAAT 61.058 57.895 28.80 0.00 0.00 1.40
409 415 1.815866 CTTGGGCCGGGCTTAAATG 59.184 57.895 28.80 8.88 0.00 2.32
410 416 0.970427 CTTGGGCCGGGCTTAAATGT 60.970 55.000 28.80 0.00 0.00 2.71
411 417 0.543174 TTGGGCCGGGCTTAAATGTT 60.543 50.000 28.80 0.00 0.00 2.71
412 418 0.543174 TGGGCCGGGCTTAAATGTTT 60.543 50.000 28.80 0.00 0.00 2.83
413 419 0.108377 GGGCCGGGCTTAAATGTTTG 60.108 55.000 28.80 0.00 0.00 2.93
414 420 0.108377 GGCCGGGCTTAAATGTTTGG 60.108 55.000 22.87 0.00 0.00 3.28
415 421 0.892063 GCCGGGCTTAAATGTTTGGA 59.108 50.000 12.87 0.00 0.00 3.53
416 422 1.480545 GCCGGGCTTAAATGTTTGGAT 59.519 47.619 12.87 0.00 0.00 3.41
417 423 2.093711 GCCGGGCTTAAATGTTTGGATT 60.094 45.455 12.87 0.00 0.00 3.01
418 424 3.618752 GCCGGGCTTAAATGTTTGGATTT 60.619 43.478 12.87 0.00 0.00 2.17
419 425 4.574892 CCGGGCTTAAATGTTTGGATTTT 58.425 39.130 0.00 0.00 0.00 1.82
420 426 5.725362 CCGGGCTTAAATGTTTGGATTTTA 58.275 37.500 0.00 0.00 0.00 1.52
421 427 6.166982 CCGGGCTTAAATGTTTGGATTTTAA 58.833 36.000 0.00 0.00 0.00 1.52
422 428 6.651225 CCGGGCTTAAATGTTTGGATTTTAAA 59.349 34.615 0.00 0.00 0.00 1.52
423 429 7.360522 CCGGGCTTAAATGTTTGGATTTTAAAC 60.361 37.037 0.00 0.00 38.26 2.01
437 443 9.947669 TTGGATTTTAAACATTGCAATTTTCTG 57.052 25.926 9.83 1.85 0.00 3.02
438 444 9.334947 TGGATTTTAAACATTGCAATTTTCTGA 57.665 25.926 9.83 0.00 0.00 3.27
439 445 9.597999 GGATTTTAAACATTGCAATTTTCTGAC 57.402 29.630 9.83 1.34 0.00 3.51
445 451 8.672214 AAACATTGCAATTTTCTGACAAAAAC 57.328 26.923 9.83 0.00 31.35 2.43
446 452 6.476896 ACATTGCAATTTTCTGACAAAAACG 58.523 32.000 9.83 0.00 31.35 3.60
447 453 6.312426 ACATTGCAATTTTCTGACAAAAACGA 59.688 30.769 9.83 0.00 31.35 3.85
448 454 6.712241 TTGCAATTTTCTGACAAAAACGAA 57.288 29.167 0.00 0.00 31.35 3.85
449 455 6.900568 TGCAATTTTCTGACAAAAACGAAT 57.099 29.167 0.00 0.00 31.35 3.34
474 480 4.646492 GGGACAAAGATGCCATGTCTTAAT 59.354 41.667 5.27 0.00 42.36 1.40
493 499 6.592607 TCTTAATAACTAAAGTTGCCACCTCG 59.407 38.462 5.62 0.00 38.90 4.63
505 511 1.504359 CCACCTCGCGTCAACTAAAA 58.496 50.000 5.77 0.00 0.00 1.52
508 514 3.479006 CACCTCGCGTCAACTAAAATTG 58.521 45.455 5.77 0.00 0.00 2.32
509 515 3.059188 CACCTCGCGTCAACTAAAATTGT 60.059 43.478 5.77 0.00 0.00 2.71
511 517 3.395671 CTCGCGTCAACTAAAATTGTCG 58.604 45.455 5.77 1.66 41.85 4.35
536 542 2.629639 AAACGTTCCGGATGAAATGC 57.370 45.000 4.15 0.00 33.94 3.56
539 545 2.980568 ACGTTCCGGATGAAATGCTTA 58.019 42.857 4.15 0.00 33.94 3.09
540 546 3.340034 ACGTTCCGGATGAAATGCTTAA 58.660 40.909 4.15 0.00 33.94 1.85
541 547 3.754323 ACGTTCCGGATGAAATGCTTAAA 59.246 39.130 4.15 0.00 33.94 1.52
542 548 4.216687 ACGTTCCGGATGAAATGCTTAAAA 59.783 37.500 4.15 0.00 33.94 1.52
544 550 5.455525 CGTTCCGGATGAAATGCTTAAAATC 59.544 40.000 4.15 0.00 33.94 2.17
545 551 5.514274 TCCGGATGAAATGCTTAAAATCC 57.486 39.130 0.00 0.00 29.44 3.01
549 555 6.812481 GGATGAAATGCTTAAAATCCGAAC 57.188 37.500 0.00 0.00 0.00 3.95
552 558 5.764131 TGAAATGCTTAAAATCCGAACGTT 58.236 33.333 0.00 0.00 0.00 3.99
567 573 2.706760 ACGTTCGAAATTTATCGCGG 57.293 45.000 6.13 0.00 42.44 6.46
568 574 1.994779 ACGTTCGAAATTTATCGCGGT 59.005 42.857 6.13 0.00 42.44 5.68
569 575 2.028404 ACGTTCGAAATTTATCGCGGTC 59.972 45.455 6.13 0.00 42.44 4.79
570 576 2.595881 CGTTCGAAATTTATCGCGGTCC 60.596 50.000 6.13 0.00 42.44 4.46
571 577 2.296831 TCGAAATTTATCGCGGTCCA 57.703 45.000 6.13 0.00 42.44 4.02
612 618 7.224362 TGTGGATCACATTTGTGTTTGAAATTC 59.776 33.333 10.30 0.00 45.76 2.17
623 629 0.820074 TTGAAATTCGGTGCCACGGT 60.820 50.000 2.14 0.00 0.00 4.83
632 638 1.068417 GTGCCACGGTAGACACACA 59.932 57.895 0.00 0.00 33.23 3.72
672 678 7.436536 GTGCAGAATTTTGTACGAATATTGG 57.563 36.000 1.56 0.00 0.00 3.16
674 680 7.429340 GTGCAGAATTTTGTACGAATATTGGAG 59.571 37.037 4.29 0.00 0.00 3.86
675 681 6.912591 GCAGAATTTTGTACGAATATTGGAGG 59.087 38.462 4.29 0.00 0.00 4.30
677 683 7.282224 CAGAATTTTGTACGAATATTGGAGGGA 59.718 37.037 4.29 0.00 0.00 4.20
678 684 7.998964 AGAATTTTGTACGAATATTGGAGGGAT 59.001 33.333 4.29 0.00 0.00 3.85
679 685 9.280174 GAATTTTGTACGAATATTGGAGGGATA 57.720 33.333 4.29 0.00 0.00 2.59
680 686 9.807921 AATTTTGTACGAATATTGGAGGGATAT 57.192 29.630 4.29 0.00 0.00 1.63
743 1843 3.673809 GCAGGATATGTACGAATTCCGAC 59.326 47.826 0.00 0.00 41.76 4.79
747 1847 4.977963 GGATATGTACGAATTCCGACGAAA 59.022 41.667 0.00 0.00 41.76 3.46
748 1848 5.459762 GGATATGTACGAATTCCGACGAAAA 59.540 40.000 0.00 0.00 41.76 2.29
749 1849 6.145048 GGATATGTACGAATTCCGACGAAAAT 59.855 38.462 0.00 0.00 41.76 1.82
750 1850 5.789710 ATGTACGAATTCCGACGAAAATT 57.210 34.783 0.00 2.00 41.76 1.82
751 1851 4.948588 TGTACGAATTCCGACGAAAATTG 58.051 39.130 11.34 7.65 41.76 2.32
753 1853 4.061570 ACGAATTCCGACGAAAATTGAC 57.938 40.909 11.34 0.88 41.76 3.18
754 1854 3.495377 ACGAATTCCGACGAAAATTGACA 59.505 39.130 11.34 0.00 41.76 3.58
755 1855 4.081761 CGAATTCCGACGAAAATTGACAG 58.918 43.478 11.34 0.65 41.76 3.51
769 1870 6.959639 AAATTGACAGCTACCAGAAGAAAA 57.040 33.333 0.00 0.00 0.00 2.29
770 1871 7.530426 AAATTGACAGCTACCAGAAGAAAAT 57.470 32.000 0.00 0.00 0.00 1.82
771 1872 8.635765 AAATTGACAGCTACCAGAAGAAAATA 57.364 30.769 0.00 0.00 0.00 1.40
772 1873 7.617041 ATTGACAGCTACCAGAAGAAAATAC 57.383 36.000 0.00 0.00 0.00 1.89
773 1874 5.488341 TGACAGCTACCAGAAGAAAATACC 58.512 41.667 0.00 0.00 0.00 2.73
816 1917 4.142271 TGGGCGAAATTTAAGCATCGAAAT 60.142 37.500 16.71 0.00 37.48 2.17
817 1918 4.803613 GGGCGAAATTTAAGCATCGAAATT 59.196 37.500 16.71 0.00 36.94 1.82
818 1919 5.974751 GGGCGAAATTTAAGCATCGAAATTA 59.025 36.000 16.71 0.00 34.86 1.40
819 1920 6.142320 GGGCGAAATTTAAGCATCGAAATTAG 59.858 38.462 16.71 0.00 34.86 1.73
830 1931 3.261981 TCGAAATTAGGGAAGTGGAGC 57.738 47.619 0.00 0.00 0.00 4.70
886 1987 1.679032 CGACTCCCAGGTTGAAATCCC 60.679 57.143 0.00 0.00 0.00 3.85
931 2032 4.760878 AGAGGAATAAAAACGAGGAGAGC 58.239 43.478 0.00 0.00 0.00 4.09
934 2035 2.311124 ATAAAAACGAGGAGAGCCGG 57.689 50.000 0.00 0.00 39.96 6.13
1434 2547 2.607750 TCCTCCCAGGACTGCCAC 60.608 66.667 0.00 0.00 40.06 5.01
1482 2621 0.109723 TCAAGCAGGTTGGTACACCC 59.890 55.000 12.42 0.00 43.29 4.61
1614 2753 2.003672 CGGGTATCACGCCGAAAAG 58.996 57.895 0.00 0.00 35.07 2.27
1716 2855 2.238942 ACACGACTGATGAAGCAACA 57.761 45.000 0.00 0.00 0.00 3.33
1770 2909 7.232330 CCCATCTCTCTGTCTCTTATTATCACA 59.768 40.741 0.00 0.00 0.00 3.58
1889 3058 2.425143 AAGCAGCTGCATTTAGGCTA 57.575 45.000 38.24 0.00 45.16 3.93
1962 3131 7.982919 TGTATTGACATGCGGTTTACTAATAGT 59.017 33.333 0.00 0.00 0.00 2.12
2094 3870 9.914131 AGTTTCATTTTTATTAGGTTCTTGAGC 57.086 29.630 0.00 0.00 0.00 4.26
2238 4014 2.837591 TGCTACTTGAGGTGCCTGATTA 59.162 45.455 0.00 0.00 0.00 1.75
2384 4160 3.395858 AGATTCGCTCATTTTGCTTCG 57.604 42.857 0.00 0.00 0.00 3.79
2392 4168 4.032900 CGCTCATTTTGCTTCGTATGTAGT 59.967 41.667 0.00 0.00 0.00 2.73
2398 4174 7.931407 TCATTTTGCTTCGTATGTAGTCCATAT 59.069 33.333 0.00 0.00 38.29 1.78
2435 4211 8.904099 AAAAGACATATATTTAGGAACGGAGG 57.096 34.615 0.00 0.00 0.00 4.30
2802 4670 6.011476 TCAAATGCAAATTGACATCTTCGA 57.989 33.333 12.72 0.00 32.10 3.71
2913 4790 5.032846 ACCCAATCTACTGAAGGATGAGAA 58.967 41.667 0.00 0.00 0.00 2.87
2965 4842 2.676748 CTAGTGGAATCTCTCCCAGCT 58.323 52.381 0.00 0.00 44.69 4.24
3240 5125 1.209504 GGGCTATGTGGTAGTTGCTCA 59.790 52.381 0.00 0.00 32.72 4.26
3291 5176 4.338539 GCAGCCACTGTGTGCTGC 62.339 66.667 36.59 36.59 46.66 5.25
3688 5594 1.899814 TCAGCCCAAGTATCTCACGTT 59.100 47.619 0.00 0.00 0.00 3.99
3944 5869 1.147191 TGTGGTAGTCTGGGACTCTGT 59.853 52.381 3.32 0.00 42.40 3.41
4038 5963 0.248289 GAATTGCCCACAGCTTGCAT 59.752 50.000 0.00 0.00 44.23 3.96
4059 5984 8.213518 TGCATAGCCTATTCTAACTTCTTTTG 57.786 34.615 0.00 0.00 0.00 2.44
4074 5999 7.181569 ACTTCTTTTGGTTTTCCTGAAATGA 57.818 32.000 0.00 0.00 41.38 2.57
4079 6004 8.891720 TCTTTTGGTTTTCCTGAAATGAATTTG 58.108 29.630 0.00 0.00 41.38 2.32
4186 6111 3.544684 GACATTGGTCTACATGCCATCA 58.455 45.455 0.00 0.00 40.99 3.07
4260 6185 6.202954 AGCTGAGTTGTGTATCAAACTGTTAC 59.797 38.462 0.00 0.00 37.81 2.50
4300 6225 4.813027 AGAAACGTAAGCGAATAGGTGAA 58.187 39.130 0.00 0.00 45.62 3.18
4351 6276 2.478134 CGGATCTACTATTGCAGCAAGC 59.522 50.000 14.47 0.00 45.96 4.01
4367 6396 0.320697 AAGCCAGTACTCGGAACCAC 59.679 55.000 13.57 0.00 0.00 4.16
4441 6473 1.230324 GTCTGTGCTCCTTTGGTGAC 58.770 55.000 0.00 0.00 0.00 3.67
4552 6584 4.416505 CTGTCAATTTTCCTGACTGCTC 57.583 45.455 4.74 0.00 43.03 4.26
4553 6585 4.070716 CTGTCAATTTTCCTGACTGCTCT 58.929 43.478 4.74 0.00 43.03 4.09
4554 6586 4.067896 TGTCAATTTTCCTGACTGCTCTC 58.932 43.478 4.74 0.00 43.03 3.20
4555 6587 4.202398 TGTCAATTTTCCTGACTGCTCTCT 60.202 41.667 4.74 0.00 43.03 3.10
4556 6588 4.391523 GTCAATTTTCCTGACTGCTCTCTC 59.608 45.833 0.00 0.00 40.10 3.20
4557 6589 4.285517 TCAATTTTCCTGACTGCTCTCTCT 59.714 41.667 0.00 0.00 0.00 3.10
4558 6590 3.951775 TTTTCCTGACTGCTCTCTCTC 57.048 47.619 0.00 0.00 0.00 3.20
4559 6591 2.897271 TTCCTGACTGCTCTCTCTCT 57.103 50.000 0.00 0.00 0.00 3.10
4560 6592 2.418368 TCCTGACTGCTCTCTCTCTC 57.582 55.000 0.00 0.00 0.00 3.20
4561 6593 1.915489 TCCTGACTGCTCTCTCTCTCT 59.085 52.381 0.00 0.00 0.00 3.10
4562 6594 2.092968 TCCTGACTGCTCTCTCTCTCTC 60.093 54.545 0.00 0.00 0.00 3.20
4563 6595 2.092753 CCTGACTGCTCTCTCTCTCTCT 60.093 54.545 0.00 0.00 0.00 3.10
4564 6596 3.201290 CTGACTGCTCTCTCTCTCTCTC 58.799 54.545 0.00 0.00 0.00 3.20
4565 6597 2.840038 TGACTGCTCTCTCTCTCTCTCT 59.160 50.000 0.00 0.00 0.00 3.10
4566 6598 3.118629 TGACTGCTCTCTCTCTCTCTCTC 60.119 52.174 0.00 0.00 0.00 3.20
4567 6599 3.110705 ACTGCTCTCTCTCTCTCTCTCT 58.889 50.000 0.00 0.00 0.00 3.10
4568 6600 3.133721 ACTGCTCTCTCTCTCTCTCTCTC 59.866 52.174 0.00 0.00 0.00 3.20
4569 6601 3.378512 TGCTCTCTCTCTCTCTCTCTCT 58.621 50.000 0.00 0.00 0.00 3.10
4570 6602 3.386078 TGCTCTCTCTCTCTCTCTCTCTC 59.614 52.174 0.00 0.00 0.00 3.20
4571 6603 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
4572 6604 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
4644 6676 7.669722 ACATGTTTTTCTTCCTGAATAAGCCTA 59.330 33.333 0.00 0.00 34.24 3.93
4645 6677 8.522830 CATGTTTTTCTTCCTGAATAAGCCTAA 58.477 33.333 0.00 0.00 34.24 2.69
4696 6728 6.889198 TCCCATGAGAGGAAACAATAGTTAG 58.111 40.000 0.00 0.00 36.84 2.34
4732 6764 6.569127 TGAACTCCCAAAGCCTATTATGTA 57.431 37.500 0.00 0.00 0.00 2.29
4733 6765 6.354130 TGAACTCCCAAAGCCTATTATGTAC 58.646 40.000 0.00 0.00 0.00 2.90
4734 6766 6.157994 TGAACTCCCAAAGCCTATTATGTACT 59.842 38.462 0.00 0.00 0.00 2.73
4735 6767 6.176014 ACTCCCAAAGCCTATTATGTACTC 57.824 41.667 0.00 0.00 0.00 2.59
4736 6768 5.071923 ACTCCCAAAGCCTATTATGTACTCC 59.928 44.000 0.00 0.00 0.00 3.85
4737 6769 4.349930 TCCCAAAGCCTATTATGTACTCCC 59.650 45.833 0.00 0.00 0.00 4.30
4738 6770 4.351111 CCCAAAGCCTATTATGTACTCCCT 59.649 45.833 0.00 0.00 0.00 4.20
4739 6771 5.513267 CCCAAAGCCTATTATGTACTCCCTC 60.513 48.000 0.00 0.00 0.00 4.30
4740 6772 5.513267 CCAAAGCCTATTATGTACTCCCTCC 60.513 48.000 0.00 0.00 0.00 4.30
4741 6773 3.432378 AGCCTATTATGTACTCCCTCCG 58.568 50.000 0.00 0.00 0.00 4.63
4742 6774 3.163467 GCCTATTATGTACTCCCTCCGT 58.837 50.000 0.00 0.00 0.00 4.69
4743 6775 3.577415 GCCTATTATGTACTCCCTCCGTT 59.423 47.826 0.00 0.00 0.00 4.44
4744 6776 4.321824 GCCTATTATGTACTCCCTCCGTTC 60.322 50.000 0.00 0.00 0.00 3.95
4745 6777 4.220163 CCTATTATGTACTCCCTCCGTTCC 59.780 50.000 0.00 0.00 0.00 3.62
4746 6778 2.077687 TATGTACTCCCTCCGTTCCC 57.922 55.000 0.00 0.00 0.00 3.97
4747 6779 0.042131 ATGTACTCCCTCCGTTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
4748 6780 0.178926 TGTACTCCCTCCGTTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
4749 6781 0.978907 GTACTCCCTCCGTTCCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
4750 6782 1.558294 GTACTCCCTCCGTTCCCAAAT 59.442 52.381 0.00 0.00 0.00 2.32
4751 6783 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4752 6784 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
4753 6785 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
4754 6786 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
4755 6787 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
4756 6788 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
4757 6789 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
4758 6790 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
4759 6791 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
4760 6792 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
4761 6793 6.602009 CCTCCGTTCCCAAATATAAGTCTTTT 59.398 38.462 0.00 0.00 0.00 2.27
4762 6794 7.122204 CCTCCGTTCCCAAATATAAGTCTTTTT 59.878 37.037 0.00 0.00 0.00 1.94
4785 6817 8.603242 TTTTAGAGATTCCAACAAGTGACTAC 57.397 34.615 0.00 0.00 0.00 2.73
4786 6818 5.808366 AGAGATTCCAACAAGTGACTACA 57.192 39.130 0.00 0.00 0.00 2.74
4787 6819 6.365970 AGAGATTCCAACAAGTGACTACAT 57.634 37.500 0.00 0.00 0.00 2.29
4788 6820 7.482169 AGAGATTCCAACAAGTGACTACATA 57.518 36.000 0.00 0.00 0.00 2.29
4789 6821 7.324178 AGAGATTCCAACAAGTGACTACATAC 58.676 38.462 0.00 0.00 0.00 2.39
4790 6822 6.100004 AGATTCCAACAAGTGACTACATACG 58.900 40.000 0.00 0.00 0.00 3.06
4791 6823 4.182693 TCCAACAAGTGACTACATACGG 57.817 45.455 0.00 0.00 0.00 4.02
4792 6824 3.827876 TCCAACAAGTGACTACATACGGA 59.172 43.478 0.00 0.00 0.00 4.69
4793 6825 4.082408 TCCAACAAGTGACTACATACGGAG 60.082 45.833 0.00 0.00 0.00 4.63
4794 6826 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
4795 6827 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
4796 6828 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
4797 6829 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
4798 6830 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
4799 6831 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
4800 6832 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
4801 6833 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
4802 6834 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
4803 6835 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
4804 6836 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
4805 6837 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
4806 6838 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
4807 6839 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
4808 6840 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
4809 6841 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
4810 6842 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
4811 6843 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
4812 6844 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
4813 6845 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
4852 6884 5.838529 CATACATCCGTATGTTGTAGTCCA 58.161 41.667 0.00 0.00 46.70 4.02
4853 6885 6.455647 CATACATCCGTATGTTGTAGTCCAT 58.544 40.000 0.00 0.00 46.70 3.41
4854 6886 5.353394 ACATCCGTATGTTGTAGTCCATT 57.647 39.130 0.00 0.00 44.07 3.16
4855 6887 5.741011 ACATCCGTATGTTGTAGTCCATTT 58.259 37.500 0.00 0.00 44.07 2.32
4856 6888 5.584649 ACATCCGTATGTTGTAGTCCATTTG 59.415 40.000 0.00 0.00 44.07 2.32
4857 6889 5.408880 TCCGTATGTTGTAGTCCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
4858 6890 5.795972 TCCGTATGTTGTAGTCCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
4859 6891 6.231951 TCCGTATGTTGTAGTCCATTTGAAA 58.768 36.000 0.00 0.00 0.00 2.69
4860 6892 6.882140 TCCGTATGTTGTAGTCCATTTGAAAT 59.118 34.615 0.00 0.00 0.00 2.17
4861 6893 6.966632 CCGTATGTTGTAGTCCATTTGAAATG 59.033 38.462 10.84 10.84 0.00 2.32
4862 6894 7.361713 CCGTATGTTGTAGTCCATTTGAAATGT 60.362 37.037 15.93 1.43 0.00 2.71
4863 6895 7.692291 CGTATGTTGTAGTCCATTTGAAATGTC 59.308 37.037 15.93 9.10 0.00 3.06
4864 6896 7.765695 ATGTTGTAGTCCATTTGAAATGTCT 57.234 32.000 15.93 14.81 0.00 3.41
4865 6897 8.862325 ATGTTGTAGTCCATTTGAAATGTCTA 57.138 30.769 15.93 13.97 0.00 2.59
4866 6898 8.684386 TGTTGTAGTCCATTTGAAATGTCTAA 57.316 30.769 15.93 4.89 0.00 2.10
4867 6899 9.126151 TGTTGTAGTCCATTTGAAATGTCTAAA 57.874 29.630 15.93 10.39 0.00 1.85
4868 6900 9.959749 GTTGTAGTCCATTTGAAATGTCTAAAA 57.040 29.630 15.93 14.59 0.00 1.52
4873 6905 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
4874 6906 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
4888 6920 9.211485 TCTAAAAAGACTTACATTTAGGAACGG 57.789 33.333 13.94 0.00 36.48 4.44
4889 6921 9.211485 CTAAAAAGACTTACATTTAGGAACGGA 57.789 33.333 8.91 0.00 33.69 4.69
4890 6922 7.668525 AAAAGACTTACATTTAGGAACGGAG 57.331 36.000 0.00 0.00 0.00 4.63
4891 6923 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
4892 6924 4.161754 AGACTTACATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
4893 6925 4.098894 ACTTACATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
4894 6926 4.161754 ACTTACATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
4895 6927 2.547990 ACATTTAGGAACGGAGGGAGT 58.452 47.619 0.00 0.00 0.00 3.85
5024 7062 0.644937 AGAGCCTCCATCCCCTTAGT 59.355 55.000 0.00 0.00 0.00 2.24
5350 7389 2.949644 AGTAAAACACCTGTCAGCCAAC 59.050 45.455 0.00 0.00 0.00 3.77
5399 7438 5.482006 TGTGTGGAACTGATAGATTCACAG 58.518 41.667 1.02 0.00 38.04 3.66
5467 7506 7.564793 TGGTATTCACAACAGATATGCTACTT 58.435 34.615 0.00 0.00 0.00 2.24
5545 7708 5.472137 TGAGTGTTGGTAAAAATGCTACTCC 59.528 40.000 0.00 0.00 33.07 3.85
5546 7709 4.765339 AGTGTTGGTAAAAATGCTACTCCC 59.235 41.667 0.00 0.00 0.00 4.30
5547 7710 4.765339 GTGTTGGTAAAAATGCTACTCCCT 59.235 41.667 0.00 0.00 0.00 4.20
5548 7711 5.007682 TGTTGGTAAAAATGCTACTCCCTC 58.992 41.667 0.00 0.00 0.00 4.30
5549 7712 5.222048 TGTTGGTAAAAATGCTACTCCCTCT 60.222 40.000 0.00 0.00 0.00 3.69
5550 7713 4.843728 TGGTAAAAATGCTACTCCCTCTG 58.156 43.478 0.00 0.00 0.00 3.35
5551 7714 4.288626 TGGTAAAAATGCTACTCCCTCTGT 59.711 41.667 0.00 0.00 0.00 3.41
5552 7715 5.222048 TGGTAAAAATGCTACTCCCTCTGTT 60.222 40.000 0.00 0.00 0.00 3.16
5553 7716 5.710567 GGTAAAAATGCTACTCCCTCTGTTT 59.289 40.000 0.00 0.00 0.00 2.83
5554 7717 6.208797 GGTAAAAATGCTACTCCCTCTGTTTT 59.791 38.462 0.00 0.00 0.00 2.43
5555 7718 6.731292 AAAAATGCTACTCCCTCTGTTTTT 57.269 33.333 0.00 0.00 0.00 1.94
5556 7719 5.712152 AAATGCTACTCCCTCTGTTTTTG 57.288 39.130 0.00 0.00 0.00 2.44
5557 7720 3.857157 TGCTACTCCCTCTGTTTTTGT 57.143 42.857 0.00 0.00 0.00 2.83
5558 7721 4.967084 TGCTACTCCCTCTGTTTTTGTA 57.033 40.909 0.00 0.00 0.00 2.41
5559 7722 5.499004 TGCTACTCCCTCTGTTTTTGTAT 57.501 39.130 0.00 0.00 0.00 2.29
5560 7723 6.614694 TGCTACTCCCTCTGTTTTTGTATA 57.385 37.500 0.00 0.00 0.00 1.47
5561 7724 6.403878 TGCTACTCCCTCTGTTTTTGTATAC 58.596 40.000 0.00 0.00 0.00 1.47
5562 7725 6.014070 TGCTACTCCCTCTGTTTTTGTATACA 60.014 38.462 0.08 0.08 0.00 2.29
5563 7726 6.877322 GCTACTCCCTCTGTTTTTGTATACAA 59.123 38.462 14.35 14.35 0.00 2.41
5564 7727 7.064728 GCTACTCCCTCTGTTTTTGTATACAAG 59.935 40.741 17.36 6.77 37.15 3.16
5565 7728 6.238648 ACTCCCTCTGTTTTTGTATACAAGG 58.761 40.000 17.36 13.17 37.15 3.61
5566 7729 6.183361 ACTCCCTCTGTTTTTGTATACAAGGT 60.183 38.462 17.36 2.48 37.15 3.50
5567 7730 6.235664 TCCCTCTGTTTTTGTATACAAGGTC 58.764 40.000 17.36 12.01 37.15 3.85
5568 7731 6.001460 CCCTCTGTTTTTGTATACAAGGTCA 58.999 40.000 17.36 15.18 37.15 4.02
5569 7732 6.072673 CCCTCTGTTTTTGTATACAAGGTCAC 60.073 42.308 17.36 12.88 37.15 3.67
5570 7733 6.710744 CCTCTGTTTTTGTATACAAGGTCACT 59.289 38.462 17.36 0.00 37.15 3.41
5571 7734 7.228706 CCTCTGTTTTTGTATACAAGGTCACTT 59.771 37.037 17.36 0.00 37.15 3.16
5572 7735 8.149973 TCTGTTTTTGTATACAAGGTCACTTC 57.850 34.615 17.36 5.80 37.15 3.01
5573 7736 7.990886 TCTGTTTTTGTATACAAGGTCACTTCT 59.009 33.333 17.36 0.00 37.15 2.85
5574 7737 8.514330 TGTTTTTGTATACAAGGTCACTTCTT 57.486 30.769 17.36 0.00 37.15 2.52
5575 7738 8.402472 TGTTTTTGTATACAAGGTCACTTCTTG 58.598 33.333 17.36 0.00 45.03 3.02
5610 7773 8.472683 TCAAACTTTGACTTGTAATTTTGGTG 57.527 30.769 0.00 0.00 34.08 4.17
5611 7774 8.091449 TCAAACTTTGACTTGTAATTTTGGTGT 58.909 29.630 0.00 0.00 34.08 4.16
5612 7775 8.716909 CAAACTTTGACTTGTAATTTTGGTGTT 58.283 29.630 0.00 0.00 0.00 3.32
5613 7776 8.474006 AACTTTGACTTGTAATTTTGGTGTTC 57.526 30.769 0.00 0.00 0.00 3.18
5614 7777 7.607250 ACTTTGACTTGTAATTTTGGTGTTCA 58.393 30.769 0.00 0.00 0.00 3.18
5615 7778 8.257306 ACTTTGACTTGTAATTTTGGTGTTCAT 58.743 29.630 0.00 0.00 0.00 2.57
5616 7779 9.743057 CTTTGACTTGTAATTTTGGTGTTCATA 57.257 29.630 0.00 0.00 0.00 2.15
5624 7787 9.261035 TGTAATTTTGGTGTTCATAATATGGGT 57.739 29.630 0.00 0.00 0.00 4.51
5677 7840 6.455360 TCAGCAGAAAGTTCTTTGAAATGT 57.545 33.333 2.38 0.00 34.74 2.71
5678 7841 6.267817 TCAGCAGAAAGTTCTTTGAAATGTG 58.732 36.000 2.38 0.00 34.74 3.21
5679 7842 5.045872 AGCAGAAAGTTCTTTGAAATGTGC 58.954 37.500 2.38 0.00 34.74 4.57
5693 7856 6.718522 TGAAATGTGCATCCAATGACATAT 57.281 33.333 0.00 0.00 33.66 1.78
5781 7944 5.050904 TGACGTGGTCTTGTATACAAAAACG 60.051 40.000 25.00 25.00 35.15 3.60
5785 7948 4.453136 TGGTCTTGTATACAAAAACGGAGC 59.547 41.667 18.55 19.01 35.15 4.70
5815 7978 6.599638 ACTGAAATTTGTAGCTACTCAATCCC 59.400 38.462 23.84 15.45 0.00 3.85
5862 8025 1.518133 CTCTGCGCTGACCTGTAGC 60.518 63.158 13.46 0.00 37.80 3.58
5900 8063 7.979537 AGCATTTGATATGTTTCGTGTCTACTA 59.020 33.333 0.00 0.00 0.00 1.82
5901 8064 8.765219 GCATTTGATATGTTTCGTGTCTACTAT 58.235 33.333 0.00 0.00 0.00 2.12
5903 8066 8.556517 TTTGATATGTTTCGTGTCTACTATCG 57.443 34.615 0.00 0.00 0.00 2.92
5904 8067 7.486802 TGATATGTTTCGTGTCTACTATCGA 57.513 36.000 0.00 0.00 0.00 3.59
5905 8068 7.922837 TGATATGTTTCGTGTCTACTATCGAA 58.077 34.615 0.00 0.00 39.83 3.71
5906 8069 8.400186 TGATATGTTTCGTGTCTACTATCGAAA 58.600 33.333 7.34 7.34 45.44 3.46
5912 8075 4.507134 CGTGTCTACTATCGAAAGAGACG 58.493 47.826 18.47 18.47 46.10 4.18
5913 8076 4.550447 CGTGTCTACTATCGAAAGAGACGG 60.550 50.000 21.62 11.38 46.93 4.79
5914 8077 7.949739 CGTGTCTACTATCGAAAGAGACGGC 62.950 52.000 21.62 13.45 46.93 5.68
5919 8082 3.509388 TCGAAAGAGACGGCCTTTC 57.491 52.632 17.47 17.47 43.53 2.62
5939 8169 4.918810 TCCCTTTTCAGAAGCTTGTTTC 57.081 40.909 2.10 0.00 0.00 2.78
6016 8246 9.177608 CTAATCCTTGTGATAAGAAATGTTGGA 57.822 33.333 0.00 0.00 31.83 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 9.989296 TCTTGATTATTTCTGAGGGGAAAAATA 57.011 29.630 0.00 0.00 38.46 1.40
9 10 8.753133 GTCTTGATTATTTCTGAGGGGAAAAAT 58.247 33.333 0.00 0.00 38.46 1.82
196 199 5.009854 CACATTGTTGGGGATGAATAACC 57.990 43.478 0.00 0.00 0.00 2.85
208 211 2.618442 AGCCAAAACCACATTGTTGG 57.382 45.000 0.87 0.87 42.87 3.77
209 212 4.320608 AGTAGCCAAAACCACATTGTTG 57.679 40.909 0.00 0.00 0.00 3.33
211 214 5.772672 TGAATAGTAGCCAAAACCACATTGT 59.227 36.000 0.00 0.00 0.00 2.71
212 215 6.266168 TGAATAGTAGCCAAAACCACATTG 57.734 37.500 0.00 0.00 0.00 2.82
214 217 5.360714 CCATGAATAGTAGCCAAAACCACAT 59.639 40.000 0.00 0.00 0.00 3.21
215 218 4.704540 CCATGAATAGTAGCCAAAACCACA 59.295 41.667 0.00 0.00 0.00 4.17
216 219 4.705023 ACCATGAATAGTAGCCAAAACCAC 59.295 41.667 0.00 0.00 0.00 4.16
251 254 6.467682 CGCGATTTATCATTTCCGAAGAAAAA 59.532 34.615 0.00 0.00 44.91 1.94
252 255 5.963004 CGCGATTTATCATTTCCGAAGAAAA 59.037 36.000 0.00 0.00 44.91 2.29
253 256 5.292345 TCGCGATTTATCATTTCCGAAGAAA 59.708 36.000 3.71 0.00 45.78 2.52
254 257 4.806775 TCGCGATTTATCATTTCCGAAGAA 59.193 37.500 3.71 0.00 0.00 2.52
255 258 4.364860 TCGCGATTTATCATTTCCGAAGA 58.635 39.130 3.71 0.00 0.00 2.87
256 259 4.708868 TCGCGATTTATCATTTCCGAAG 57.291 40.909 3.71 0.00 0.00 3.79
259 264 4.772434 ACATTCGCGATTTATCATTTCCG 58.228 39.130 10.88 0.00 0.00 4.30
279 284 2.822561 TGCCATGCTTAAAATCCGAACA 59.177 40.909 0.00 0.00 0.00 3.18
281 286 2.159254 GCTGCCATGCTTAAAATCCGAA 60.159 45.455 0.00 0.00 0.00 4.30
283 288 1.406539 AGCTGCCATGCTTAAAATCCG 59.593 47.619 0.00 0.00 40.93 4.18
284 289 2.542411 CGAGCTGCCATGCTTAAAATCC 60.542 50.000 0.00 0.00 44.17 3.01
287 292 1.819928 TCGAGCTGCCATGCTTAAAA 58.180 45.000 0.00 0.00 44.17 1.52
301 307 5.222631 AGTTTCCATGAAAAACATTCGAGC 58.777 37.500 19.41 0.00 38.73 5.03
303 309 8.410141 ACTAAAGTTTCCATGAAAAACATTCGA 58.590 29.630 19.41 0.00 38.73 3.71
308 314 7.486551 CGTGAACTAAAGTTTCCATGAAAAACA 59.513 33.333 19.41 5.00 38.73 2.83
317 323 3.202829 AGGCGTGAACTAAAGTTTCCA 57.797 42.857 0.00 0.00 38.56 3.53
320 326 5.008316 CAGGTTTAGGCGTGAACTAAAGTTT 59.992 40.000 12.92 0.00 40.08 2.66
336 342 3.206150 CCCGACCAATGATCAGGTTTAG 58.794 50.000 7.98 3.93 38.50 1.85
337 343 2.682563 GCCCGACCAATGATCAGGTTTA 60.683 50.000 7.98 0.00 38.50 2.01
338 344 1.955208 GCCCGACCAATGATCAGGTTT 60.955 52.381 7.98 0.00 38.50 3.27
339 345 0.394352 GCCCGACCAATGATCAGGTT 60.394 55.000 7.98 0.00 38.50 3.50
340 346 1.224592 GCCCGACCAATGATCAGGT 59.775 57.895 6.35 6.35 41.83 4.00
341 347 1.526917 GGCCCGACCAATGATCAGG 60.527 63.158 0.09 0.00 38.86 3.86
343 349 2.189257 CGGCCCGACCAATGATCA 59.811 61.111 0.00 0.00 39.03 2.92
344 350 2.591715 CCGGCCCGACCAATGATC 60.592 66.667 3.71 0.00 39.03 2.92
345 351 4.189580 CCCGGCCCGACCAATGAT 62.190 66.667 3.71 0.00 39.03 2.45
356 362 4.986708 TTTGTCCCAAGCCCGGCC 62.987 66.667 5.55 0.00 0.00 6.13
357 363 2.503382 TTTTTGTCCCAAGCCCGGC 61.503 57.895 0.00 0.00 0.00 6.13
358 364 1.365999 GTTTTTGTCCCAAGCCCGG 59.634 57.895 0.00 0.00 0.00 5.73
359 365 1.007849 CGTTTTTGTCCCAAGCCCG 60.008 57.895 0.00 0.00 0.00 6.13
361 367 2.812358 ATTCGTTTTTGTCCCAAGCC 57.188 45.000 0.00 0.00 0.00 4.35
362 368 5.333035 GCTTAAATTCGTTTTTGTCCCAAGC 60.333 40.000 0.00 0.00 29.28 4.01
363 369 5.176774 GGCTTAAATTCGTTTTTGTCCCAAG 59.823 40.000 0.00 0.00 0.00 3.61
364 370 5.051153 GGCTTAAATTCGTTTTTGTCCCAA 58.949 37.500 0.00 0.00 0.00 4.12
366 372 3.671459 CGGCTTAAATTCGTTTTTGTCCC 59.329 43.478 0.00 0.00 0.00 4.46
367 373 3.671459 CCGGCTTAAATTCGTTTTTGTCC 59.329 43.478 0.00 0.00 0.00 4.02
368 374 3.671459 CCCGGCTTAAATTCGTTTTTGTC 59.329 43.478 0.00 0.00 0.00 3.18
369 375 3.644823 CCCGGCTTAAATTCGTTTTTGT 58.355 40.909 0.00 0.00 0.00 2.83
370 376 2.410392 GCCCGGCTTAAATTCGTTTTTG 59.590 45.455 0.71 0.00 0.00 2.44
372 378 1.890489 AGCCCGGCTTAAATTCGTTTT 59.110 42.857 5.94 0.00 33.89 2.43
390 396 2.058001 ATTTAAGCCCGGCCCAAGC 61.058 57.895 5.55 0.00 38.76 4.01
391 397 0.970427 ACATTTAAGCCCGGCCCAAG 60.970 55.000 5.55 0.00 0.00 3.61
392 398 0.543174 AACATTTAAGCCCGGCCCAA 60.543 50.000 5.55 0.00 0.00 4.12
393 399 0.543174 AAACATTTAAGCCCGGCCCA 60.543 50.000 5.55 0.00 0.00 5.36
394 400 0.108377 CAAACATTTAAGCCCGGCCC 60.108 55.000 5.55 0.00 0.00 5.80
395 401 0.108377 CCAAACATTTAAGCCCGGCC 60.108 55.000 5.55 0.00 0.00 6.13
396 402 0.892063 TCCAAACATTTAAGCCCGGC 59.108 50.000 0.00 0.00 0.00 6.13
397 403 3.885724 AATCCAAACATTTAAGCCCGG 57.114 42.857 0.00 0.00 0.00 5.73
398 404 7.171678 TGTTTAAAATCCAAACATTTAAGCCCG 59.828 33.333 0.00 0.00 40.12 6.13
399 405 8.384607 TGTTTAAAATCCAAACATTTAAGCCC 57.615 30.769 0.00 0.00 40.12 5.19
411 417 9.947669 CAGAAAATTGCAATGTTTAAAATCCAA 57.052 25.926 15.98 0.00 0.00 3.53
412 418 9.334947 TCAGAAAATTGCAATGTTTAAAATCCA 57.665 25.926 15.98 0.00 0.00 3.41
413 419 9.597999 GTCAGAAAATTGCAATGTTTAAAATCC 57.402 29.630 15.98 1.98 0.00 3.01
419 425 9.766277 GTTTTTGTCAGAAAATTGCAATGTTTA 57.234 25.926 15.98 3.03 31.80 2.01
420 426 7.481169 CGTTTTTGTCAGAAAATTGCAATGTTT 59.519 29.630 15.98 15.44 31.80 2.83
421 427 6.960431 CGTTTTTGTCAGAAAATTGCAATGTT 59.040 30.769 14.84 14.84 31.80 2.71
422 428 6.312426 TCGTTTTTGTCAGAAAATTGCAATGT 59.688 30.769 13.82 3.97 31.80 2.71
423 429 6.703857 TCGTTTTTGTCAGAAAATTGCAATG 58.296 32.000 13.82 1.09 31.80 2.82
424 430 6.900568 TCGTTTTTGTCAGAAAATTGCAAT 57.099 29.167 5.99 5.99 31.80 3.56
425 431 6.712241 TTCGTTTTTGTCAGAAAATTGCAA 57.288 29.167 0.00 0.00 31.80 4.08
426 432 6.900568 ATTCGTTTTTGTCAGAAAATTGCA 57.099 29.167 0.00 0.00 31.80 4.08
427 433 6.628461 CCAATTCGTTTTTGTCAGAAAATTGC 59.372 34.615 6.35 0.00 31.80 3.56
428 434 7.010923 TCCCAATTCGTTTTTGTCAGAAAATTG 59.989 33.333 0.00 0.00 31.80 2.32
429 435 7.011016 GTCCCAATTCGTTTTTGTCAGAAAATT 59.989 33.333 0.00 0.00 31.80 1.82
430 436 6.478673 GTCCCAATTCGTTTTTGTCAGAAAAT 59.521 34.615 0.00 0.00 31.80 1.82
431 437 5.808030 GTCCCAATTCGTTTTTGTCAGAAAA 59.192 36.000 0.00 0.00 0.00 2.29
432 438 5.105716 TGTCCCAATTCGTTTTTGTCAGAAA 60.106 36.000 0.00 0.00 0.00 2.52
433 439 4.399618 TGTCCCAATTCGTTTTTGTCAGAA 59.600 37.500 0.00 0.00 0.00 3.02
434 440 3.948473 TGTCCCAATTCGTTTTTGTCAGA 59.052 39.130 0.00 0.00 0.00 3.27
435 441 4.300189 TGTCCCAATTCGTTTTTGTCAG 57.700 40.909 0.00 0.00 0.00 3.51
436 442 4.720649 TTGTCCCAATTCGTTTTTGTCA 57.279 36.364 0.00 0.00 0.00 3.58
437 443 5.344884 TCTTTGTCCCAATTCGTTTTTGTC 58.655 37.500 0.00 0.00 0.00 3.18
438 444 5.331876 TCTTTGTCCCAATTCGTTTTTGT 57.668 34.783 0.00 0.00 0.00 2.83
439 445 5.333263 GCATCTTTGTCCCAATTCGTTTTTG 60.333 40.000 0.00 0.00 0.00 2.44
440 446 4.749598 GCATCTTTGTCCCAATTCGTTTTT 59.250 37.500 0.00 0.00 0.00 1.94
441 447 4.306600 GCATCTTTGTCCCAATTCGTTTT 58.693 39.130 0.00 0.00 0.00 2.43
442 448 3.306019 GGCATCTTTGTCCCAATTCGTTT 60.306 43.478 0.00 0.00 0.00 3.60
443 449 2.231235 GGCATCTTTGTCCCAATTCGTT 59.769 45.455 0.00 0.00 0.00 3.85
444 450 1.818674 GGCATCTTTGTCCCAATTCGT 59.181 47.619 0.00 0.00 0.00 3.85
445 451 1.818060 TGGCATCTTTGTCCCAATTCG 59.182 47.619 0.00 0.00 0.00 3.34
446 452 3.196254 ACATGGCATCTTTGTCCCAATTC 59.804 43.478 0.00 0.00 0.00 2.17
447 453 3.175594 ACATGGCATCTTTGTCCCAATT 58.824 40.909 0.00 0.00 0.00 2.32
448 454 2.762327 GACATGGCATCTTTGTCCCAAT 59.238 45.455 7.56 0.00 34.95 3.16
449 455 2.170166 GACATGGCATCTTTGTCCCAA 58.830 47.619 7.56 0.00 34.95 4.12
460 466 8.190784 GCAACTTTAGTTATTAAGACATGGCAT 58.809 33.333 0.00 0.00 36.32 4.40
463 469 7.968405 GTGGCAACTTTAGTTATTAAGACATGG 59.032 37.037 0.00 0.00 36.32 3.66
474 480 2.419667 GCGAGGTGGCAACTTTAGTTA 58.580 47.619 6.46 0.00 36.32 2.24
493 499 4.123276 TCACGACAATTTTAGTTGACGC 57.877 40.909 10.37 0.00 46.04 5.19
526 532 5.455525 CGTTCGGATTTTAAGCATTTCATCC 59.544 40.000 0.00 0.00 0.00 3.51
534 540 3.443054 CGAACGTTCGGATTTTAAGCA 57.557 42.857 36.53 0.00 46.30 3.91
546 552 3.017576 CCGCGATAAATTTCGAACGTTC 58.982 45.455 18.47 18.47 41.62 3.95
547 553 2.412770 ACCGCGATAAATTTCGAACGTT 59.587 40.909 8.23 0.00 41.62 3.99
548 554 1.994779 ACCGCGATAAATTTCGAACGT 59.005 42.857 8.23 0.00 41.62 3.99
549 555 2.595881 GGACCGCGATAAATTTCGAACG 60.596 50.000 8.23 0.00 41.62 3.95
552 558 2.296831 TGGACCGCGATAAATTTCGA 57.703 45.000 8.23 0.00 41.62 3.71
612 618 2.431942 GTGTCTACCGTGGCACCG 60.432 66.667 12.86 8.37 0.00 4.94
623 629 4.295870 GACGTTGACTGAATGTGTGTCTA 58.704 43.478 0.00 0.00 33.67 2.59
632 638 1.886861 GCACGCGACGTTGACTGAAT 61.887 55.000 15.93 0.00 38.32 2.57
669 675 9.034800 GCAAATGGATTTATAATATCCCTCCAA 57.965 33.333 17.12 5.71 40.74 3.53
670 676 7.619302 GGCAAATGGATTTATAATATCCCTCCA 59.381 37.037 17.12 10.03 40.74 3.86
671 677 7.201821 CGGCAAATGGATTTATAATATCCCTCC 60.202 40.741 17.12 12.08 40.74 4.30
672 678 7.201821 CCGGCAAATGGATTTATAATATCCCTC 60.202 40.741 17.12 7.49 40.74 4.30
674 680 6.682861 GCCGGCAAATGGATTTATAATATCCC 60.683 42.308 24.80 5.59 40.74 3.85
675 681 6.127479 TGCCGGCAAATGGATTTATAATATCC 60.127 38.462 30.74 14.74 41.63 2.59
677 683 6.849085 TGCCGGCAAATGGATTTATAATAT 57.151 33.333 30.74 0.00 0.00 1.28
678 684 6.451393 GTTGCCGGCAAATGGATTTATAATA 58.549 36.000 41.60 13.17 37.70 0.98
679 685 5.296748 GTTGCCGGCAAATGGATTTATAAT 58.703 37.500 41.60 0.00 37.70 1.28
680 686 4.442192 GGTTGCCGGCAAATGGATTTATAA 60.442 41.667 41.60 14.42 37.70 0.98
687 725 3.369400 CGGTTGCCGGCAAATGGA 61.369 61.111 41.60 19.50 44.15 3.41
743 1843 4.690748 TCTTCTGGTAGCTGTCAATTTTCG 59.309 41.667 0.00 0.00 0.00 3.46
747 1847 7.121315 GGTATTTTCTTCTGGTAGCTGTCAATT 59.879 37.037 0.00 0.00 0.00 2.32
748 1848 6.599638 GGTATTTTCTTCTGGTAGCTGTCAAT 59.400 38.462 0.00 0.00 0.00 2.57
749 1849 5.938125 GGTATTTTCTTCTGGTAGCTGTCAA 59.062 40.000 0.00 0.00 0.00 3.18
750 1850 5.012664 TGGTATTTTCTTCTGGTAGCTGTCA 59.987 40.000 0.00 0.00 0.00 3.58
751 1851 5.351740 GTGGTATTTTCTTCTGGTAGCTGTC 59.648 44.000 0.00 0.00 0.00 3.51
753 1853 4.330074 CGTGGTATTTTCTTCTGGTAGCTG 59.670 45.833 0.00 0.00 0.00 4.24
754 1854 4.504858 CGTGGTATTTTCTTCTGGTAGCT 58.495 43.478 0.00 0.00 0.00 3.32
755 1855 3.621715 CCGTGGTATTTTCTTCTGGTAGC 59.378 47.826 0.00 0.00 0.00 3.58
769 1870 4.906618 AGTTGACATTCTTTCCGTGGTAT 58.093 39.130 0.00 0.00 0.00 2.73
770 1871 4.345859 AGTTGACATTCTTTCCGTGGTA 57.654 40.909 0.00 0.00 0.00 3.25
771 1872 3.208747 AGTTGACATTCTTTCCGTGGT 57.791 42.857 0.00 0.00 0.00 4.16
772 1873 4.290155 CAAAGTTGACATTCTTTCCGTGG 58.710 43.478 4.00 0.00 32.52 4.94
773 1874 4.290155 CCAAAGTTGACATTCTTTCCGTG 58.710 43.478 0.00 0.00 32.52 4.94
816 1917 0.324943 GTGCTGCTCCACTTCCCTAA 59.675 55.000 0.00 0.00 33.02 2.69
817 1918 0.835971 TGTGCTGCTCCACTTCCCTA 60.836 55.000 0.00 0.00 36.68 3.53
818 1919 1.708993 TTGTGCTGCTCCACTTCCCT 61.709 55.000 0.00 0.00 36.68 4.20
819 1920 1.228245 TTGTGCTGCTCCACTTCCC 60.228 57.895 0.00 0.00 36.68 3.97
830 1931 3.716006 CGACCGCCAGTTGTGCTG 61.716 66.667 0.00 0.00 44.63 4.41
886 1987 1.406539 CTCCGCCCCTGAAATTCAATG 59.593 52.381 0.00 0.00 0.00 2.82
957 2060 4.738998 TACGGACGGCTTCGGGGA 62.739 66.667 3.70 0.00 38.38 4.81
1434 2547 2.315176 CTGTGGTAGGAGGAGATGAGG 58.685 57.143 0.00 0.00 0.00 3.86
1482 2621 3.118445 GGGGAATTGAGGAACAGAGAGAG 60.118 52.174 0.00 0.00 0.00 3.20
1517 2656 3.244526 ACATTGTGTGTGATCCAGTAGCA 60.245 43.478 0.00 0.00 40.28 3.49
1518 2657 3.338249 ACATTGTGTGTGATCCAGTAGC 58.662 45.455 0.00 0.00 40.28 3.58
1521 2660 3.071457 TCAGACATTGTGTGTGATCCAGT 59.929 43.478 13.05 0.00 44.30 4.00
1522 2661 3.667360 TCAGACATTGTGTGTGATCCAG 58.333 45.455 13.05 0.00 44.30 3.86
1523 2662 3.767902 TCAGACATTGTGTGTGATCCA 57.232 42.857 13.05 0.00 44.30 3.41
1562 2701 3.640407 GGCCAGTCCCAGTCTGCA 61.640 66.667 0.00 0.00 0.00 4.41
1563 2702 2.490270 AATGGCCAGTCCCAGTCTGC 62.490 60.000 13.05 0.00 38.50 4.26
1564 2703 0.038744 AAATGGCCAGTCCCAGTCTG 59.961 55.000 13.05 0.00 38.50 3.51
1614 2753 1.442526 CCAAGATGAGCGCCATGTCC 61.443 60.000 14.84 2.84 35.17 4.02
1716 2855 1.307084 GTACCCCCTGAGAAGCCCT 60.307 63.158 0.00 0.00 0.00 5.19
1740 2879 9.836179 ATAATAAGAGACAGAGAGATGGGTAAT 57.164 33.333 0.00 0.00 0.00 1.89
1889 3058 7.851228 TCCAGATAATCAATGAACAGTAGTGT 58.149 34.615 0.00 0.00 39.19 3.55
2238 4014 7.067494 GGAGTAGCATTACATCAGAACCAAAAT 59.933 37.037 0.00 0.00 31.96 1.82
2310 4086 8.135529 CGTATGTAGTCCATGTTGAAATCTCTA 58.864 37.037 0.00 0.00 34.86 2.43
2370 4146 5.470845 ACTACATACGAAGCAAAATGAGC 57.529 39.130 0.00 0.00 0.00 4.26
2417 4193 7.477008 ACTACTCCCTCCGTTCCTAAATATAT 58.523 38.462 0.00 0.00 0.00 0.86
2431 4207 5.163530 GCTAGTTGTAAGAACTACTCCCTCC 60.164 48.000 0.00 0.00 40.25 4.30
2435 4211 5.652518 CCAGCTAGTTGTAAGAACTACTCC 58.347 45.833 5.81 0.00 40.25 3.85
2470 4246 5.590663 ACGACTCTACACAGACACATGATAT 59.409 40.000 0.00 0.00 0.00 1.63
2802 4670 5.327732 TGGAAGCAATGAGAAAAGGAGAAT 58.672 37.500 0.00 0.00 0.00 2.40
2913 4790 8.150945 ACAGAAGTGTTGTAACATTGTCTAGAT 58.849 33.333 0.00 0.00 41.59 1.98
2965 4842 7.123098 ACACATTTGATCAAATCTCCAGCATTA 59.877 33.333 27.08 0.53 38.84 1.90
3291 5176 2.106166 AGATAGGAATGCAGCTCCTTGG 59.894 50.000 21.79 0.00 40.61 3.61
3736 5648 7.912383 GCACAAAGCTTGATATAATTTGCATT 58.088 30.769 0.00 0.00 41.15 3.56
3944 5869 9.844790 CAGAAAGTCAAAACTTGCAATATATCA 57.155 29.630 0.00 0.00 45.07 2.15
4038 5963 9.582648 AAAACCAAAAGAAGTTAGAATAGGCTA 57.417 29.630 0.00 0.00 0.00 3.93
4048 5973 8.754080 TCATTTCAGGAAAACCAAAAGAAGTTA 58.246 29.630 0.00 0.00 33.56 2.24
4059 5984 6.992123 AGAACCAAATTCATTTCAGGAAAACC 59.008 34.615 0.00 0.00 40.09 3.27
4074 5999 2.893424 AGATGCACCCAGAACCAAATT 58.107 42.857 0.00 0.00 0.00 1.82
4233 6158 4.153117 CAGTTTGATACACAACTCAGCTCC 59.847 45.833 0.00 0.00 38.29 4.70
4260 6185 3.452755 TCTTACTCACATATGTGCCCG 57.547 47.619 27.71 20.06 45.25 6.13
4279 6204 5.520022 TTTCACCTATTCGCTTACGTTTC 57.480 39.130 0.00 0.00 41.18 2.78
4338 6263 2.611292 GAGTACTGGCTTGCTGCAATAG 59.389 50.000 16.38 15.77 45.15 1.73
4342 6267 1.374631 CGAGTACTGGCTTGCTGCA 60.375 57.895 0.00 0.00 45.15 4.41
4351 6276 0.388134 CACGTGGTTCCGAGTACTGG 60.388 60.000 7.95 0.00 0.00 4.00
4367 6396 1.134907 AGTAACCGGCTGATAACCACG 60.135 52.381 0.00 0.00 0.00 4.94
4441 6473 3.935203 ACCTTGTCGTAAATGCTCATGAG 59.065 43.478 18.84 18.84 0.00 2.90
4550 6582 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
4552 6584 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
4553 6585 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
4554 6586 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
4555 6587 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
4556 6588 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
4557 6589 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
4558 6590 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
4559 6591 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
4560 6592 4.892345 TCAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
4561 6593 4.646945 GTCAGAGAGAGAGAGAGAGAGAGA 59.353 50.000 0.00 0.00 0.00 3.10
4562 6594 4.403752 TGTCAGAGAGAGAGAGAGAGAGAG 59.596 50.000 0.00 0.00 0.00 3.20
4563 6595 4.352893 TGTCAGAGAGAGAGAGAGAGAGA 58.647 47.826 0.00 0.00 0.00 3.10
4564 6596 4.691175 CTGTCAGAGAGAGAGAGAGAGAG 58.309 52.174 0.00 0.00 39.94 3.20
4565 6597 3.118629 GCTGTCAGAGAGAGAGAGAGAGA 60.119 52.174 3.32 0.00 39.94 3.10
4566 6598 3.201290 GCTGTCAGAGAGAGAGAGAGAG 58.799 54.545 3.32 0.00 39.94 3.20
4567 6599 2.571202 TGCTGTCAGAGAGAGAGAGAGA 59.429 50.000 3.32 0.00 39.94 3.10
4568 6600 2.941064 CTGCTGTCAGAGAGAGAGAGAG 59.059 54.545 3.32 0.00 42.95 3.20
4569 6601 2.571202 TCTGCTGTCAGAGAGAGAGAGA 59.429 50.000 3.32 0.00 43.95 3.10
4570 6602 2.989909 TCTGCTGTCAGAGAGAGAGAG 58.010 52.381 3.32 0.00 43.95 3.20
4668 6700 7.283329 ACTATTGTTTCCTCTCATGGGAATAC 58.717 38.462 0.00 2.96 41.72 1.89
4696 6728 7.759886 GCTTTGGGAGTTCATTTAGGAATAAAC 59.240 37.037 0.00 0.00 0.00 2.01
4732 6764 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4733 6765 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
4734 6766 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
4735 6767 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
4736 6768 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
4737 6769 7.625828 AAAAGACTTATATTTGGGAACGGAG 57.374 36.000 0.00 0.00 0.00 4.63
4759 6791 9.052759 GTAGTCACTTGTTGGAATCTCTAAAAA 57.947 33.333 0.00 0.00 0.00 1.94
4760 6792 8.208224 TGTAGTCACTTGTTGGAATCTCTAAAA 58.792 33.333 0.00 0.00 0.00 1.52
4761 6793 7.732025 TGTAGTCACTTGTTGGAATCTCTAAA 58.268 34.615 0.00 0.00 0.00 1.85
4762 6794 7.297936 TGTAGTCACTTGTTGGAATCTCTAA 57.702 36.000 0.00 0.00 0.00 2.10
4763 6795 6.911250 TGTAGTCACTTGTTGGAATCTCTA 57.089 37.500 0.00 0.00 0.00 2.43
4764 6796 5.808366 TGTAGTCACTTGTTGGAATCTCT 57.192 39.130 0.00 0.00 0.00 3.10
4765 6797 6.253727 CGTATGTAGTCACTTGTTGGAATCTC 59.746 42.308 0.00 0.00 0.00 2.75
4766 6798 6.100004 CGTATGTAGTCACTTGTTGGAATCT 58.900 40.000 0.00 0.00 0.00 2.40
4767 6799 5.291128 CCGTATGTAGTCACTTGTTGGAATC 59.709 44.000 0.00 0.00 0.00 2.52
4768 6800 5.046878 TCCGTATGTAGTCACTTGTTGGAAT 60.047 40.000 0.00 0.00 0.00 3.01
4769 6801 4.281435 TCCGTATGTAGTCACTTGTTGGAA 59.719 41.667 0.00 0.00 0.00 3.53
4770 6802 3.827876 TCCGTATGTAGTCACTTGTTGGA 59.172 43.478 0.00 0.00 0.00 3.53
4771 6803 4.174009 CTCCGTATGTAGTCACTTGTTGG 58.826 47.826 0.00 0.00 0.00 3.77
4772 6804 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
4773 6805 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
4774 6806 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
4775 6807 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
4776 6808 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
4777 6809 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
4778 6810 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
4779 6811 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
4780 6812 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
4781 6813 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
4782 6814 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
4783 6815 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
4784 6816 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
4785 6817 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
4786 6818 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
4787 6819 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
4788 6820 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
4789 6821 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
4790 6822 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
4791 6823 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
4830 6862 6.665992 ATGGACTACAACATACGGATGTAT 57.334 37.500 15.10 8.21 45.93 2.29
4831 6863 6.474140 AATGGACTACAACATACGGATGTA 57.526 37.500 15.10 0.00 45.93 2.29
4833 6865 5.815222 TCAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
4834 6866 5.984725 TCAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
4835 6867 5.408880 TCAAATGGACTACAACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
4836 6868 6.489127 TTTCAAATGGACTACAACATACGG 57.511 37.500 0.00 0.00 0.00 4.02
4837 6869 7.526608 ACATTTCAAATGGACTACAACATACG 58.473 34.615 14.70 0.00 0.00 3.06
4838 6870 8.730680 AGACATTTCAAATGGACTACAACATAC 58.269 33.333 14.70 0.00 0.00 2.39
4839 6871 8.862325 AGACATTTCAAATGGACTACAACATA 57.138 30.769 14.70 0.00 0.00 2.29
4840 6872 7.765695 AGACATTTCAAATGGACTACAACAT 57.234 32.000 14.70 0.00 0.00 2.71
4841 6873 8.684386 TTAGACATTTCAAATGGACTACAACA 57.316 30.769 14.70 1.25 0.00 3.33
4842 6874 9.959749 TTTTAGACATTTCAAATGGACTACAAC 57.040 29.630 14.70 0.00 0.00 3.32
4847 6879 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
4848 6880 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
4862 6894 9.211485 CCGTTCCTAAATGTAAGTCTTTTTAGA 57.789 33.333 13.43 2.40 0.00 2.10
4863 6895 9.211485 TCCGTTCCTAAATGTAAGTCTTTTTAG 57.789 33.333 7.75 7.75 0.00 1.85
4864 6896 9.211485 CTCCGTTCCTAAATGTAAGTCTTTTTA 57.789 33.333 0.00 0.00 0.00 1.52
4865 6897 7.174426 CCTCCGTTCCTAAATGTAAGTCTTTTT 59.826 37.037 0.00 0.00 0.00 1.94
4866 6898 6.653740 CCTCCGTTCCTAAATGTAAGTCTTTT 59.346 38.462 0.00 0.00 0.00 2.27
4867 6899 6.171213 CCTCCGTTCCTAAATGTAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
4868 6900 5.338137 CCCTCCGTTCCTAAATGTAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
4869 6901 4.161754 CCCTCCGTTCCTAAATGTAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
4870 6902 4.161001 TCCCTCCGTTCCTAAATGTAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
4871 6903 4.098894 TCCCTCCGTTCCTAAATGTAAGT 58.901 43.478 0.00 0.00 0.00 2.24
4872 6904 4.161754 ACTCCCTCCGTTCCTAAATGTAAG 59.838 45.833 0.00 0.00 0.00 2.34
4873 6905 4.098894 ACTCCCTCCGTTCCTAAATGTAA 58.901 43.478 0.00 0.00 0.00 2.41
4874 6906 3.716431 ACTCCCTCCGTTCCTAAATGTA 58.284 45.455 0.00 0.00 0.00 2.29
4875 6907 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
4876 6908 4.344102 TCATACTCCCTCCGTTCCTAAATG 59.656 45.833 0.00 0.00 0.00 2.32
4877 6909 4.553678 TCATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
4878 6910 3.985127 TCATACTCCCTCCGTTCCTAAA 58.015 45.455 0.00 0.00 0.00 1.85
4879 6911 3.675348 TCATACTCCCTCCGTTCCTAA 57.325 47.619 0.00 0.00 0.00 2.69
4880 6912 3.053095 ACTTCATACTCCCTCCGTTCCTA 60.053 47.826 0.00 0.00 0.00 2.94
4881 6913 2.292323 ACTTCATACTCCCTCCGTTCCT 60.292 50.000 0.00 0.00 0.00 3.36
4882 6914 2.108970 ACTTCATACTCCCTCCGTTCC 58.891 52.381 0.00 0.00 0.00 3.62
4883 6915 5.532664 AATACTTCATACTCCCTCCGTTC 57.467 43.478 0.00 0.00 0.00 3.95
4884 6916 8.750298 CATATAATACTTCATACTCCCTCCGTT 58.250 37.037 0.00 0.00 0.00 4.44
4885 6917 7.894364 ACATATAATACTTCATACTCCCTCCGT 59.106 37.037 0.00 0.00 0.00 4.69
4886 6918 8.294954 ACATATAATACTTCATACTCCCTCCG 57.705 38.462 0.00 0.00 0.00 4.63
4928 6960 8.034058 AGATGCAGTATCTGTTAACAAGAAAC 57.966 34.615 10.03 5.94 44.46 2.78
5038 7076 7.609097 ATCTCCTAATCAAGTGAGCAGATTA 57.391 36.000 0.00 0.00 34.19 1.75
5399 7438 5.532406 TCTGGCATCTGTATAATTTTGCTCC 59.468 40.000 0.00 0.00 0.00 4.70
5467 7506 5.428253 GCTTAGTCTGACAATTGGATACCA 58.572 41.667 10.83 0.00 0.00 3.25
5545 7708 6.710744 AGTGACCTTGTATACAAAAACAGAGG 59.289 38.462 18.55 15.83 35.15 3.69
5546 7709 7.730364 AGTGACCTTGTATACAAAAACAGAG 57.270 36.000 18.55 5.73 35.15 3.35
5547 7710 7.990886 AGAAGTGACCTTGTATACAAAAACAGA 59.009 33.333 18.55 0.00 35.15 3.41
5548 7711 8.154649 AGAAGTGACCTTGTATACAAAAACAG 57.845 34.615 18.55 7.09 35.15 3.16
5549 7712 8.402472 CAAGAAGTGACCTTGTATACAAAAACA 58.598 33.333 18.55 14.48 36.99 2.83
5550 7713 8.782533 CAAGAAGTGACCTTGTATACAAAAAC 57.217 34.615 18.55 13.43 36.99 2.43
5585 7748 8.091449 ACACCAAAATTACAAGTCAAAGTTTGA 58.909 29.630 14.35 14.35 40.98 2.69
5586 7749 8.250538 ACACCAAAATTACAAGTCAAAGTTTG 57.749 30.769 9.44 9.44 39.25 2.93
5587 7750 8.840833 AACACCAAAATTACAAGTCAAAGTTT 57.159 26.923 0.00 0.00 0.00 2.66
5588 7751 8.091449 TGAACACCAAAATTACAAGTCAAAGTT 58.909 29.630 0.00 0.00 0.00 2.66
5589 7752 7.607250 TGAACACCAAAATTACAAGTCAAAGT 58.393 30.769 0.00 0.00 0.00 2.66
5590 7753 8.647143 ATGAACACCAAAATTACAAGTCAAAG 57.353 30.769 0.00 0.00 0.00 2.77
5598 7761 9.261035 ACCCATATTATGAACACCAAAATTACA 57.739 29.630 5.21 0.00 0.00 2.41
5651 7814 8.800332 ACATTTCAAAGAACTTTCTGCTGATAT 58.200 29.630 0.00 4.31 37.65 1.63
5652 7815 8.077991 CACATTTCAAAGAACTTTCTGCTGATA 58.922 33.333 0.00 2.66 37.65 2.15
5653 7816 6.921857 CACATTTCAAAGAACTTTCTGCTGAT 59.078 34.615 0.00 0.00 37.65 2.90
5654 7817 6.267817 CACATTTCAAAGAACTTTCTGCTGA 58.732 36.000 0.00 0.00 37.65 4.26
5655 7818 5.051240 GCACATTTCAAAGAACTTTCTGCTG 60.051 40.000 0.00 0.00 37.65 4.41
5656 7819 5.045872 GCACATTTCAAAGAACTTTCTGCT 58.954 37.500 0.00 0.00 37.65 4.24
5657 7820 4.805192 TGCACATTTCAAAGAACTTTCTGC 59.195 37.500 0.00 0.00 37.65 4.26
5658 7821 6.145048 GGATGCACATTTCAAAGAACTTTCTG 59.855 38.462 0.00 0.00 37.65 3.02
5659 7822 6.183360 TGGATGCACATTTCAAAGAACTTTCT 60.183 34.615 0.00 0.00 39.74 2.52
5660 7823 5.984926 TGGATGCACATTTCAAAGAACTTTC 59.015 36.000 0.00 0.00 0.00 2.62
5661 7824 5.916318 TGGATGCACATTTCAAAGAACTTT 58.084 33.333 0.00 0.00 0.00 2.66
5662 7825 5.534207 TGGATGCACATTTCAAAGAACTT 57.466 34.783 0.00 0.00 0.00 2.66
5663 7826 5.534207 TTGGATGCACATTTCAAAGAACT 57.466 34.783 0.00 0.00 0.00 3.01
5664 7827 5.927689 TCATTGGATGCACATTTCAAAGAAC 59.072 36.000 0.00 0.00 0.00 3.01
5665 7828 5.927689 GTCATTGGATGCACATTTCAAAGAA 59.072 36.000 0.00 0.00 0.00 2.52
5666 7829 5.010820 TGTCATTGGATGCACATTTCAAAGA 59.989 36.000 0.00 0.00 0.00 2.52
5667 7830 5.231702 TGTCATTGGATGCACATTTCAAAG 58.768 37.500 0.00 0.00 0.00 2.77
5668 7831 5.211174 TGTCATTGGATGCACATTTCAAA 57.789 34.783 0.00 0.00 0.00 2.69
5669 7832 4.868314 TGTCATTGGATGCACATTTCAA 57.132 36.364 0.00 0.00 0.00 2.69
5670 7833 6.718522 ATATGTCATTGGATGCACATTTCA 57.281 33.333 0.00 0.00 34.86 2.69
5671 7834 8.428186 AAAATATGTCATTGGATGCACATTTC 57.572 30.769 0.00 0.00 34.86 2.17
5672 7835 8.795842 AAAAATATGTCATTGGATGCACATTT 57.204 26.923 0.00 4.65 34.86 2.32
5781 7944 4.033014 GCTACAAATTTCAGTACTCGCTCC 59.967 45.833 0.00 0.00 0.00 4.70
5785 7948 7.027760 TGAGTAGCTACAAATTTCAGTACTCG 58.972 38.462 25.28 0.00 38.54 4.18
5862 8025 2.610433 TCAAATGCTGAGCTACTGTCG 58.390 47.619 5.83 0.00 0.00 4.35
5900 8063 1.405661 GGAAAGGCCGTCTCTTTCGAT 60.406 52.381 9.09 0.00 46.50 3.59
5901 8064 0.037605 GGAAAGGCCGTCTCTTTCGA 60.038 55.000 9.09 0.00 46.50 3.71
5903 8066 0.325272 AGGGAAAGGCCGTCTCTTTC 59.675 55.000 6.07 6.02 45.47 2.62
5904 8067 0.771755 AAGGGAAAGGCCGTCTCTTT 59.228 50.000 16.54 2.82 31.51 2.52
5905 8068 0.771755 AAAGGGAAAGGCCGTCTCTT 59.228 50.000 16.54 16.54 37.41 2.85
5906 8069 0.771755 AAAAGGGAAAGGCCGTCTCT 59.228 50.000 6.07 6.07 37.63 3.10
5907 8070 1.166129 GAAAAGGGAAAGGCCGTCTC 58.834 55.000 9.09 5.42 37.63 3.36
5908 8071 0.476771 TGAAAAGGGAAAGGCCGTCT 59.523 50.000 9.09 0.00 37.63 4.18
5909 8072 0.881796 CTGAAAAGGGAAAGGCCGTC 59.118 55.000 0.00 0.00 37.63 4.79
5910 8073 0.476771 TCTGAAAAGGGAAAGGCCGT 59.523 50.000 0.00 0.00 37.63 5.68
5912 8075 1.273606 GCTTCTGAAAAGGGAAAGGCC 59.726 52.381 0.00 0.00 0.00 5.19
5913 8076 2.242926 AGCTTCTGAAAAGGGAAAGGC 58.757 47.619 0.00 0.00 0.00 4.35
5914 8077 3.638627 ACAAGCTTCTGAAAAGGGAAAGG 59.361 43.478 0.00 0.00 0.00 3.11
5915 8078 4.926140 ACAAGCTTCTGAAAAGGGAAAG 57.074 40.909 0.00 0.00 0.00 2.62
5917 8080 4.202010 CGAAACAAGCTTCTGAAAAGGGAA 60.202 41.667 0.00 0.00 0.00 3.97
5918 8081 3.315191 CGAAACAAGCTTCTGAAAAGGGA 59.685 43.478 0.00 0.00 0.00 4.20
5919 8082 3.632189 CGAAACAAGCTTCTGAAAAGGG 58.368 45.455 0.00 0.00 0.00 3.95
5939 8169 8.575454 GTTGCTTCTTAAACACTTTTATATGCG 58.425 33.333 0.00 0.00 0.00 4.73
5980 8210 1.303309 CAAGGATTAGAGCCGCCAAG 58.697 55.000 0.00 0.00 0.00 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.