Multiple sequence alignment - TraesCS7A01G190900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G190900 chr7A 100.000 3997 0 0 1 3997 148806701 148810697 0.000000e+00 7382.0
1 TraesCS7A01G190900 chr7A 87.302 378 37 7 3115 3489 148658114 148658483 4.780000e-114 422.0
2 TraesCS7A01G190900 chr7A 80.258 233 28 9 3493 3714 148658556 148658781 4.130000e-35 159.0
3 TraesCS7A01G190900 chr7A 89.655 58 6 0 2742 2799 148657767 148657824 1.540000e-09 75.0
4 TraesCS7A01G190900 chr7D 94.614 687 37 0 1208 1894 147435153 147435839 0.000000e+00 1064.0
5 TraesCS7A01G190900 chr7D 93.516 694 32 1 2757 3437 147561978 147562671 0.000000e+00 1020.0
6 TraesCS7A01G190900 chr7D 92.962 682 46 1 1290 1971 147555028 147555707 0.000000e+00 992.0
7 TraesCS7A01G190900 chr7D 89.116 735 65 9 1994 2724 147555688 147556411 0.000000e+00 900.0
8 TraesCS7A01G190900 chr7D 83.773 493 44 12 635 1124 147494794 147495253 6.130000e-118 435.0
9 TraesCS7A01G190900 chr7D 85.475 358 22 10 1 349 114312213 114311877 2.960000e-91 346.0
10 TraesCS7A01G190900 chr7D 90.551 254 19 5 29 280 633936607 633936357 8.280000e-87 331.0
11 TraesCS7A01G190900 chr7D 93.407 182 7 1 3816 3997 147494362 147494538 8.520000e-67 265.0
12 TraesCS7A01G190900 chr7D 80.889 225 33 7 3493 3714 147413060 147413277 6.870000e-38 169.0
13 TraesCS7A01G190900 chr7D 89.655 58 6 0 2742 2799 147412273 147412330 1.540000e-09 75.0
14 TraesCS7A01G190900 chr7D 100.000 28 0 0 325 352 10626227 10626200 7.000000e-03 52.8
15 TraesCS7A01G190900 chr7B 92.756 704 41 4 1290 1985 110339221 110339922 0.000000e+00 1009.0
16 TraesCS7A01G190900 chr7B 92.479 718 31 9 2652 3355 110344680 110345388 0.000000e+00 1005.0
17 TraesCS7A01G190900 chr7B 89.927 685 55 9 1982 2663 110339889 110340562 0.000000e+00 870.0
18 TraesCS7A01G190900 chr7B 89.294 411 23 10 651 1046 110338432 110338836 2.770000e-136 496.0
19 TraesCS7A01G190900 chr7B 85.161 465 54 9 675 1138 110321254 110321704 2.810000e-126 462.0
20 TraesCS7A01G190900 chr7B 87.831 378 33 9 3115 3489 110309723 110310090 7.940000e-117 431.0
21 TraesCS7A01G190900 chr7B 97.674 129 3 0 3353 3481 110347970 110348098 5.200000e-54 222.0
22 TraesCS7A01G190900 chr7B 82.143 224 30 6 3493 3714 110310161 110310376 2.450000e-42 183.0
23 TraesCS7A01G190900 chr7B 92.000 125 10 0 350 474 547260388 547260264 4.110000e-40 176.0
24 TraesCS7A01G190900 chr7B 79.044 272 29 14 3735 3991 110310630 110310888 1.150000e-35 161.0
25 TraesCS7A01G190900 chr4A 92.857 126 9 0 350 475 730114757 730114632 2.450000e-42 183.0
26 TraesCS7A01G190900 chr4A 90.476 126 11 1 350 474 616720035 616720160 8.890000e-37 165.0
27 TraesCS7A01G190900 chr1D 92.800 125 9 0 350 474 2487267 2487391 8.820000e-42 182.0
28 TraesCS7A01G190900 chr1D 92.063 126 10 0 350 475 2688366 2688491 1.140000e-40 178.0
29 TraesCS7A01G190900 chr6B 93.443 122 7 1 1 121 144895019 144894898 3.170000e-41 180.0
30 TraesCS7A01G190900 chr3B 92.000 125 10 0 350 474 12285114 12284990 4.110000e-40 176.0
31 TraesCS7A01G190900 chr3B 92.000 125 10 0 350 474 749676752 749676876 4.110000e-40 176.0
32 TraesCS7A01G190900 chr4B 91.339 127 10 1 350 475 5936195 5936069 5.310000e-39 172.0
33 TraesCS7A01G190900 chr1A 90.551 127 9 3 350 474 23618582 23618707 8.890000e-37 165.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G190900 chr7A 148806701 148810697 3996 False 7382.000000 7382 100.000000 1 3997 1 chr7A.!!$F1 3996
1 TraesCS7A01G190900 chr7A 148657767 148658781 1014 False 218.666667 422 85.738333 2742 3714 3 chr7A.!!$F2 972
2 TraesCS7A01G190900 chr7D 147435153 147435839 686 False 1064.000000 1064 94.614000 1208 1894 1 chr7D.!!$F1 686
3 TraesCS7A01G190900 chr7D 147561978 147562671 693 False 1020.000000 1020 93.516000 2757 3437 1 chr7D.!!$F2 680
4 TraesCS7A01G190900 chr7D 147555028 147556411 1383 False 946.000000 992 91.039000 1290 2724 2 chr7D.!!$F5 1434
5 TraesCS7A01G190900 chr7D 147494362 147495253 891 False 350.000000 435 88.590000 635 3997 2 chr7D.!!$F4 3362
6 TraesCS7A01G190900 chr7B 110338432 110340562 2130 False 791.666667 1009 90.659000 651 2663 3 chr7B.!!$F3 2012
7 TraesCS7A01G190900 chr7B 110344680 110348098 3418 False 613.500000 1005 95.076500 2652 3481 2 chr7B.!!$F4 829
8 TraesCS7A01G190900 chr7B 110309723 110310888 1165 False 258.333333 431 83.006000 3115 3991 3 chr7B.!!$F2 876

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
225 226 0.036732 TGGGCTAGCTCTGTTTGTGG 59.963 55.0 17.26 0.0 0.00 4.17 F
461 462 0.036732 CCTGGGTGCAAGTGCTCTAA 59.963 55.0 4.69 0.0 42.66 2.10 F
491 492 0.038892 CCACGCCTAACAGTGTACGT 60.039 55.0 0.00 1.8 36.69 3.57 F
691 693 0.172578 CGTTGGAGATGCTGTACCGA 59.827 55.0 0.00 0.0 0.00 4.69 F
1815 2063 0.179108 ACTGGAGCGCGTATTTCCTC 60.179 55.0 8.43 4.1 32.12 3.71 F
1872 2120 0.329596 ACATCAGGAACAAGAGGGCC 59.670 55.0 0.00 0.0 0.00 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1815 2063 0.028902 CAGCATCCATGATGTGTGCG 59.971 55.000 11.78 5.62 41.60 5.34 R
2379 2629 0.036671 GTTACTTGGACGTGAGGGGG 60.037 60.000 0.00 0.00 0.00 5.40 R
2459 2709 0.465097 TCACGTCCGGGTATCTCTCC 60.465 60.000 0.00 0.00 0.00 3.71 R
2688 2938 1.001406 CCTGGCTCGTTTCTTCTCTGT 59.999 52.381 0.00 0.00 0.00 3.41 R
2725 2975 0.886563 GCATGGAGCAATATCTGGCC 59.113 55.000 0.00 0.00 44.79 5.36 R
3504 6462 1.132817 TCCCCAGGCTACCCTTCTATC 60.133 57.143 0.00 0.00 40.33 2.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.394712 GGTGTGGAGGCTCGGGTG 62.395 72.222 8.69 0.00 0.00 4.61
28 29 4.379243 AGGCTCGGGTGCGAACTG 62.379 66.667 0.00 0.00 0.00 3.16
38 39 2.276058 GCGAACTGCGATGCGAAC 60.276 61.111 0.00 0.00 44.57 3.95
39 40 3.010585 GCGAACTGCGATGCGAACA 62.011 57.895 0.00 0.00 44.57 3.18
40 41 1.057822 CGAACTGCGATGCGAACAG 59.942 57.895 0.00 0.00 44.57 3.16
41 42 1.344226 CGAACTGCGATGCGAACAGA 61.344 55.000 0.00 0.00 44.57 3.41
42 43 0.790207 GAACTGCGATGCGAACAGAA 59.210 50.000 0.00 0.00 35.38 3.02
43 44 0.512952 AACTGCGATGCGAACAGAAC 59.487 50.000 0.00 0.00 35.38 3.01
44 45 1.057822 CTGCGATGCGAACAGAACG 59.942 57.895 0.00 0.00 33.10 3.95
45 46 1.344226 CTGCGATGCGAACAGAACGA 61.344 55.000 0.00 0.00 33.10 3.85
46 47 0.735978 TGCGATGCGAACAGAACGAT 60.736 50.000 0.00 0.00 0.00 3.73
47 48 0.043822 GCGATGCGAACAGAACGATC 60.044 55.000 0.00 0.00 0.00 3.69
48 49 0.224746 CGATGCGAACAGAACGATCG 59.775 55.000 14.88 14.88 42.39 3.69
49 50 1.545759 GATGCGAACAGAACGATCGA 58.454 50.000 24.34 0.00 42.10 3.59
50 51 2.120232 GATGCGAACAGAACGATCGAT 58.880 47.619 24.34 10.66 42.10 3.59
51 52 1.268265 TGCGAACAGAACGATCGATG 58.732 50.000 24.34 18.52 42.10 3.84
52 53 0.043822 GCGAACAGAACGATCGATGC 60.044 55.000 24.34 10.20 42.10 3.91
53 54 1.550065 CGAACAGAACGATCGATGCT 58.450 50.000 24.34 12.42 42.10 3.79
55 56 1.002366 AACAGAACGATCGATGCTGC 58.998 50.000 24.34 0.00 0.00 5.25
56 57 1.142185 ACAGAACGATCGATGCTGCG 61.142 55.000 24.34 2.06 0.00 5.18
57 58 0.867329 CAGAACGATCGATGCTGCGA 60.867 55.000 24.34 4.09 45.22 5.10
58 59 0.179137 AGAACGATCGATGCTGCGAA 60.179 50.000 24.34 0.00 44.22 4.70
59 60 0.228238 GAACGATCGATGCTGCGAAG 59.772 55.000 24.34 0.00 44.22 3.79
60 61 1.148157 AACGATCGATGCTGCGAAGG 61.148 55.000 24.34 3.93 44.22 3.46
61 62 1.589993 CGATCGATGCTGCGAAGGT 60.590 57.895 10.26 0.00 44.22 3.50
62 63 1.815212 CGATCGATGCTGCGAAGGTG 61.815 60.000 10.26 0.00 44.22 4.00
63 64 1.493950 GATCGATGCTGCGAAGGTGG 61.494 60.000 0.54 0.00 44.22 4.61
66 67 1.699656 CGATGCTGCGAAGGTGGAAG 61.700 60.000 0.00 0.00 0.00 3.46
67 68 1.372087 GATGCTGCGAAGGTGGAAGG 61.372 60.000 0.00 0.00 0.00 3.46
68 69 2.747855 GCTGCGAAGGTGGAAGGG 60.748 66.667 0.00 0.00 0.00 3.95
69 70 3.068881 CTGCGAAGGTGGAAGGGA 58.931 61.111 0.00 0.00 0.00 4.20
70 71 1.604378 CTGCGAAGGTGGAAGGGAT 59.396 57.895 0.00 0.00 0.00 3.85
71 72 0.745845 CTGCGAAGGTGGAAGGGATG 60.746 60.000 0.00 0.00 0.00 3.51
73 74 1.452108 CGAAGGTGGAAGGGATGCC 60.452 63.158 0.00 0.00 0.00 4.40
74 75 1.452108 GAAGGTGGAAGGGATGCCG 60.452 63.158 0.00 0.00 0.00 5.69
75 76 2.893682 GAAGGTGGAAGGGATGCCGG 62.894 65.000 0.00 0.00 0.00 6.13
76 77 3.728373 GGTGGAAGGGATGCCGGT 61.728 66.667 1.90 0.00 0.00 5.28
78 79 1.749258 GTGGAAGGGATGCCGGTTC 60.749 63.158 1.90 0.00 0.00 3.62
79 80 2.513897 GGAAGGGATGCCGGTTCG 60.514 66.667 1.90 0.00 0.00 3.95
82 83 3.325201 AAGGGATGCCGGTTCGTCC 62.325 63.158 10.95 10.95 40.59 4.79
84 85 3.782443 GGATGCCGGTTCGTCCCT 61.782 66.667 1.90 0.00 36.39 4.20
85 86 2.428925 GGATGCCGGTTCGTCCCTA 61.429 63.158 1.90 0.00 36.39 3.53
86 87 1.227176 GATGCCGGTTCGTCCCTAC 60.227 63.158 1.90 0.00 0.00 3.18
97 98 0.096628 CGTCCCTACGTCTGAACTCG 59.903 60.000 0.00 0.00 44.21 4.18
98 99 0.450983 GTCCCTACGTCTGAACTCGG 59.549 60.000 0.00 0.00 0.00 4.63
99 100 0.325933 TCCCTACGTCTGAACTCGGA 59.674 55.000 0.00 0.00 0.00 4.55
100 101 1.064906 TCCCTACGTCTGAACTCGGAT 60.065 52.381 0.00 0.00 33.23 4.18
101 102 1.334243 CCCTACGTCTGAACTCGGATC 59.666 57.143 0.00 0.00 33.23 3.36
102 103 1.003759 CCTACGTCTGAACTCGGATCG 60.004 57.143 0.00 8.18 33.23 3.69
103 104 1.931841 CTACGTCTGAACTCGGATCGA 59.068 52.381 13.69 0.00 33.23 3.59
104 105 1.380524 ACGTCTGAACTCGGATCGAT 58.619 50.000 0.00 0.00 34.61 3.59
106 107 1.657816 CGTCTGAACTCGGATCGATCG 60.658 57.143 18.81 9.36 34.61 3.69
107 108 1.598132 GTCTGAACTCGGATCGATCGA 59.402 52.381 21.86 21.86 34.61 3.59
108 109 2.224549 GTCTGAACTCGGATCGATCGAT 59.775 50.000 29.76 29.76 34.61 3.59
109 110 2.224314 TCTGAACTCGGATCGATCGATG 59.776 50.000 33.86 21.26 34.61 3.84
111 112 0.598562 AACTCGGATCGATCGATGGG 59.401 55.000 33.86 22.35 34.61 4.00
112 113 0.250770 ACTCGGATCGATCGATGGGA 60.251 55.000 33.86 25.88 34.61 4.37
115 116 1.893137 TCGGATCGATCGATGGGATTT 59.107 47.619 33.86 10.29 34.82 2.17
116 117 2.299013 TCGGATCGATCGATGGGATTTT 59.701 45.455 33.86 9.47 34.82 1.82
117 118 3.067106 CGGATCGATCGATGGGATTTTT 58.933 45.455 33.86 8.66 34.82 1.94
139 140 6.971527 TTTTTACGATGATGGACGTGTATT 57.028 33.333 0.00 0.00 42.61 1.89
141 142 5.959652 TTACGATGATGGACGTGTATTTG 57.040 39.130 0.00 0.00 42.61 2.32
142 143 3.857052 ACGATGATGGACGTGTATTTGT 58.143 40.909 0.00 0.00 41.17 2.83
143 144 3.616821 ACGATGATGGACGTGTATTTGTG 59.383 43.478 0.00 0.00 41.17 3.33
144 145 3.001228 CGATGATGGACGTGTATTTGTGG 59.999 47.826 0.00 0.00 0.00 4.17
145 146 3.410631 TGATGGACGTGTATTTGTGGT 57.589 42.857 0.00 0.00 0.00 4.16
146 147 3.070748 TGATGGACGTGTATTTGTGGTG 58.929 45.455 0.00 0.00 0.00 4.17
147 148 2.623878 TGGACGTGTATTTGTGGTGT 57.376 45.000 0.00 0.00 0.00 4.16
148 149 2.214347 TGGACGTGTATTTGTGGTGTG 58.786 47.619 0.00 0.00 0.00 3.82
149 150 1.069500 GGACGTGTATTTGTGGTGTGC 60.069 52.381 0.00 0.00 0.00 4.57
150 151 1.871039 GACGTGTATTTGTGGTGTGCT 59.129 47.619 0.00 0.00 0.00 4.40
152 153 1.196808 CGTGTATTTGTGGTGTGCTCC 59.803 52.381 0.00 0.00 0.00 4.70
154 155 2.621055 GTGTATTTGTGGTGTGCTCCAA 59.379 45.455 0.00 0.00 39.34 3.53
155 156 2.621055 TGTATTTGTGGTGTGCTCCAAC 59.379 45.455 0.00 0.00 39.34 3.77
156 157 1.039856 ATTTGTGGTGTGCTCCAACC 58.960 50.000 0.00 0.00 39.34 3.77
157 158 0.323816 TTTGTGGTGTGCTCCAACCA 60.324 50.000 0.00 0.00 39.34 3.67
158 159 0.106268 TTGTGGTGTGCTCCAACCAT 60.106 50.000 1.78 0.00 39.34 3.55
159 160 0.106268 TGTGGTGTGCTCCAACCATT 60.106 50.000 1.78 0.00 39.34 3.16
160 161 1.039856 GTGGTGTGCTCCAACCATTT 58.960 50.000 1.78 0.00 39.34 2.32
161 162 1.039068 TGGTGTGCTCCAACCATTTG 58.961 50.000 0.00 0.00 34.24 2.32
169 170 2.656055 CAACCATTTGGGCCGTGG 59.344 61.111 17.74 17.74 42.05 4.94
170 171 3.310307 AACCATTTGGGCCGTGGC 61.310 61.111 18.87 1.16 42.05 5.01
171 172 3.826265 AACCATTTGGGCCGTGGCT 62.826 57.895 18.87 7.29 42.05 4.75
175 176 2.573083 ATTTGGGCCGTGGCTGTTG 61.573 57.895 11.25 0.00 41.60 3.33
176 177 2.992817 ATTTGGGCCGTGGCTGTTGA 62.993 55.000 11.25 0.00 41.60 3.18
185 186 2.598394 GGCTGTTGAGGCCTTGCA 60.598 61.111 6.77 5.65 45.57 4.08
187 188 2.633509 GCTGTTGAGGCCTTGCAGG 61.634 63.158 24.14 11.27 38.80 4.85
188 189 1.073722 CTGTTGAGGCCTTGCAGGA 59.926 57.895 6.77 0.00 37.67 3.86
189 190 0.538057 CTGTTGAGGCCTTGCAGGAA 60.538 55.000 6.77 0.00 37.67 3.36
191 192 1.039856 GTTGAGGCCTTGCAGGAAAA 58.960 50.000 6.77 0.00 37.67 2.29
192 193 1.412343 GTTGAGGCCTTGCAGGAAAAA 59.588 47.619 6.77 0.00 37.67 1.94
194 195 1.133513 TGAGGCCTTGCAGGAAAAAGA 60.134 47.619 6.77 0.00 37.67 2.52
195 196 1.543358 GAGGCCTTGCAGGAAAAAGAG 59.457 52.381 6.77 0.00 37.67 2.85
196 197 1.133356 AGGCCTTGCAGGAAAAAGAGT 60.133 47.619 0.00 0.00 37.67 3.24
197 198 1.000171 GGCCTTGCAGGAAAAAGAGTG 60.000 52.381 0.00 0.00 37.67 3.51
198 199 1.683385 GCCTTGCAGGAAAAAGAGTGT 59.317 47.619 0.00 0.00 37.67 3.55
199 200 2.544486 GCCTTGCAGGAAAAAGAGTGTG 60.544 50.000 0.00 0.00 37.67 3.82
200 201 2.035066 CCTTGCAGGAAAAAGAGTGTGG 59.965 50.000 0.00 0.00 37.67 4.17
202 203 2.297701 TGCAGGAAAAAGAGTGTGGAC 58.702 47.619 0.00 0.00 0.00 4.02
203 204 2.092429 TGCAGGAAAAAGAGTGTGGACT 60.092 45.455 0.00 0.00 33.98 3.85
204 205 2.291741 GCAGGAAAAAGAGTGTGGACTG 59.708 50.000 0.00 0.00 30.16 3.51
205 206 2.291741 CAGGAAAAAGAGTGTGGACTGC 59.708 50.000 0.00 0.00 30.16 4.40
207 208 2.291741 GGAAAAAGAGTGTGGACTGCTG 59.708 50.000 0.00 0.00 30.16 4.41
208 209 1.972872 AAAAGAGTGTGGACTGCTGG 58.027 50.000 0.00 0.00 30.16 4.85
209 210 0.109342 AAAGAGTGTGGACTGCTGGG 59.891 55.000 0.00 0.00 30.16 4.45
210 211 2.359230 GAGTGTGGACTGCTGGGC 60.359 66.667 0.00 0.00 30.16 5.36
211 212 2.851102 AGTGTGGACTGCTGGGCT 60.851 61.111 0.00 0.00 0.00 5.19
212 213 1.536418 AGTGTGGACTGCTGGGCTA 60.536 57.895 0.00 0.00 0.00 3.93
213 214 1.078848 GTGTGGACTGCTGGGCTAG 60.079 63.158 0.00 0.00 0.00 3.42
225 226 0.036732 TGGGCTAGCTCTGTTTGTGG 59.963 55.000 17.26 0.00 0.00 4.17
226 227 0.678048 GGGCTAGCTCTGTTTGTGGG 60.678 60.000 15.72 0.00 0.00 4.61
227 228 1.308783 GGCTAGCTCTGTTTGTGGGC 61.309 60.000 15.72 0.00 0.00 5.36
228 229 1.639298 GCTAGCTCTGTTTGTGGGCG 61.639 60.000 7.70 0.00 0.00 6.13
229 230 0.320771 CTAGCTCTGTTTGTGGGCGT 60.321 55.000 0.00 0.00 0.00 5.68
230 231 0.970640 TAGCTCTGTTTGTGGGCGTA 59.029 50.000 0.00 0.00 0.00 4.42
231 232 0.324943 AGCTCTGTTTGTGGGCGTAT 59.675 50.000 0.00 0.00 0.00 3.06
232 233 0.447801 GCTCTGTTTGTGGGCGTATG 59.552 55.000 0.00 0.00 0.00 2.39
233 234 1.808411 CTCTGTTTGTGGGCGTATGT 58.192 50.000 0.00 0.00 0.00 2.29
234 235 1.464608 CTCTGTTTGTGGGCGTATGTG 59.535 52.381 0.00 0.00 0.00 3.21
235 236 1.202710 TCTGTTTGTGGGCGTATGTGT 60.203 47.619 0.00 0.00 0.00 3.72
236 237 2.037381 TCTGTTTGTGGGCGTATGTGTA 59.963 45.455 0.00 0.00 0.00 2.90
237 238 3.006940 CTGTTTGTGGGCGTATGTGTAT 58.993 45.455 0.00 0.00 0.00 2.29
238 239 3.004171 TGTTTGTGGGCGTATGTGTATC 58.996 45.455 0.00 0.00 0.00 2.24
239 240 3.004171 GTTTGTGGGCGTATGTGTATCA 58.996 45.455 0.00 0.00 0.00 2.15
240 241 2.595124 TGTGGGCGTATGTGTATCAG 57.405 50.000 0.00 0.00 0.00 2.90
241 242 1.828595 TGTGGGCGTATGTGTATCAGT 59.171 47.619 0.00 0.00 0.00 3.41
242 243 2.235155 TGTGGGCGTATGTGTATCAGTT 59.765 45.455 0.00 0.00 0.00 3.16
243 244 3.267483 GTGGGCGTATGTGTATCAGTTT 58.733 45.455 0.00 0.00 0.00 2.66
244 245 3.308866 GTGGGCGTATGTGTATCAGTTTC 59.691 47.826 0.00 0.00 0.00 2.78
245 246 3.055747 TGGGCGTATGTGTATCAGTTTCA 60.056 43.478 0.00 0.00 0.00 2.69
246 247 4.127171 GGGCGTATGTGTATCAGTTTCAT 58.873 43.478 0.00 0.00 0.00 2.57
247 248 4.574828 GGGCGTATGTGTATCAGTTTCATT 59.425 41.667 0.00 0.00 0.00 2.57
248 249 5.065988 GGGCGTATGTGTATCAGTTTCATTT 59.934 40.000 0.00 0.00 0.00 2.32
249 250 6.404293 GGGCGTATGTGTATCAGTTTCATTTT 60.404 38.462 0.00 0.00 0.00 1.82
250 251 7.027161 GGCGTATGTGTATCAGTTTCATTTTT 58.973 34.615 0.00 0.00 0.00 1.94
337 338 4.916983 TTCAGTTGTTGAATTGAGGTGG 57.083 40.909 0.00 0.00 40.82 4.61
338 339 3.221771 TCAGTTGTTGAATTGAGGTGGG 58.778 45.455 0.00 0.00 31.34 4.61
339 340 1.963515 AGTTGTTGAATTGAGGTGGGC 59.036 47.619 0.00 0.00 0.00 5.36
342 343 1.304052 TTGAATTGAGGTGGGCCCG 60.304 57.895 19.37 0.00 38.74 6.13
343 344 3.140814 GAATTGAGGTGGGCCCGC 61.141 66.667 28.23 28.23 38.74 6.13
344 345 4.759205 AATTGAGGTGGGCCCGCC 62.759 66.667 42.66 42.66 46.30 6.13
354 355 3.249189 GGCCCGCCCCTGATATGA 61.249 66.667 0.00 0.00 0.00 2.15
355 356 2.348998 GCCCGCCCCTGATATGAG 59.651 66.667 0.00 0.00 0.00 2.90
357 358 1.978473 CCCGCCCCTGATATGAGAG 59.022 63.158 0.00 0.00 0.00 3.20
358 359 0.542938 CCCGCCCCTGATATGAGAGA 60.543 60.000 0.00 0.00 0.00 3.10
360 361 1.694150 CCGCCCCTGATATGAGAGAAA 59.306 52.381 0.00 0.00 0.00 2.52
361 362 2.548920 CCGCCCCTGATATGAGAGAAAC 60.549 54.545 0.00 0.00 0.00 2.78
362 363 2.103094 CGCCCCTGATATGAGAGAAACA 59.897 50.000 0.00 0.00 0.00 2.83
363 364 3.432186 CGCCCCTGATATGAGAGAAACAA 60.432 47.826 0.00 0.00 0.00 2.83
365 366 4.949856 GCCCCTGATATGAGAGAAACAAAA 59.050 41.667 0.00 0.00 0.00 2.44
366 367 5.418840 GCCCCTGATATGAGAGAAACAAAAA 59.581 40.000 0.00 0.00 0.00 1.94
401 402 7.751047 TCATATACAAAGTTAGTTGTCTCGC 57.249 36.000 0.00 0.00 40.85 5.03
403 404 5.840940 ATACAAAGTTAGTTGTCTCGCAC 57.159 39.130 0.00 0.00 40.85 5.34
405 406 3.555956 ACAAAGTTAGTTGTCTCGCACAG 59.444 43.478 0.00 0.00 37.10 3.66
406 407 3.728076 AAGTTAGTTGTCTCGCACAGA 57.272 42.857 0.00 0.00 35.97 3.41
408 409 3.839293 AGTTAGTTGTCTCGCACAGATC 58.161 45.455 0.00 0.00 35.97 2.75
409 410 3.508012 AGTTAGTTGTCTCGCACAGATCT 59.492 43.478 0.00 0.00 35.97 2.75
410 411 4.021894 AGTTAGTTGTCTCGCACAGATCTT 60.022 41.667 0.00 0.00 35.97 2.40
411 412 5.183331 AGTTAGTTGTCTCGCACAGATCTTA 59.817 40.000 0.00 0.00 35.97 2.10
412 413 4.521130 AGTTGTCTCGCACAGATCTTAA 57.479 40.909 0.00 0.00 35.97 1.85
414 415 4.926238 AGTTGTCTCGCACAGATCTTAAAG 59.074 41.667 0.00 0.00 35.97 1.85
415 416 3.254060 TGTCTCGCACAGATCTTAAAGC 58.746 45.455 0.00 0.00 32.08 3.51
416 417 3.254060 GTCTCGCACAGATCTTAAAGCA 58.746 45.455 0.00 0.00 32.08 3.91
417 418 3.679980 GTCTCGCACAGATCTTAAAGCAA 59.320 43.478 0.00 0.00 32.08 3.91
418 419 4.331168 GTCTCGCACAGATCTTAAAGCAAT 59.669 41.667 0.00 0.00 32.08 3.56
419 420 5.520288 GTCTCGCACAGATCTTAAAGCAATA 59.480 40.000 0.00 0.00 32.08 1.90
420 421 6.201806 GTCTCGCACAGATCTTAAAGCAATAT 59.798 38.462 0.00 0.00 32.08 1.28
421 422 6.763135 TCTCGCACAGATCTTAAAGCAATATT 59.237 34.615 0.00 0.00 0.00 1.28
422 423 6.718388 TCGCACAGATCTTAAAGCAATATTG 58.282 36.000 11.27 11.27 0.00 1.90
425 426 7.375280 CGCACAGATCTTAAAGCAATATTGAAG 59.625 37.037 19.73 12.90 0.00 3.02
427 428 9.932699 CACAGATCTTAAAGCAATATTGAAGAG 57.067 33.333 19.73 9.37 0.00 2.85
430 431 9.896645 AGATCTTAAAGCAATATTGAAGAGTCA 57.103 29.630 19.73 0.00 0.00 3.41
432 433 9.896645 ATCTTAAAGCAATATTGAAGAGTCAGA 57.103 29.630 19.73 10.26 34.49 3.27
433 434 9.725019 TCTTAAAGCAATATTGAAGAGTCAGAA 57.275 29.630 19.73 0.00 34.49 3.02
437 438 7.727331 AGCAATATTGAAGAGTCAGAATAGC 57.273 36.000 19.73 0.00 34.49 2.97
438 439 7.278135 AGCAATATTGAAGAGTCAGAATAGCA 58.722 34.615 19.73 0.00 34.49 3.49
439 440 7.772292 AGCAATATTGAAGAGTCAGAATAGCAA 59.228 33.333 19.73 0.00 34.49 3.91
440 441 8.068977 GCAATATTGAAGAGTCAGAATAGCAAG 58.931 37.037 19.73 0.00 34.49 4.01
441 442 8.557864 CAATATTGAAGAGTCAGAATAGCAAGG 58.442 37.037 10.04 0.00 34.49 3.61
442 443 3.866651 TGAAGAGTCAGAATAGCAAGGC 58.133 45.455 0.00 0.00 0.00 4.35
443 444 2.998316 AGAGTCAGAATAGCAAGGCC 57.002 50.000 0.00 0.00 0.00 5.19
444 445 2.476199 AGAGTCAGAATAGCAAGGCCT 58.524 47.619 0.00 0.00 0.00 5.19
445 446 2.170187 AGAGTCAGAATAGCAAGGCCTG 59.830 50.000 5.69 1.10 0.00 4.85
446 447 1.211457 AGTCAGAATAGCAAGGCCTGG 59.789 52.381 5.69 3.35 0.00 4.45
447 448 0.548031 TCAGAATAGCAAGGCCTGGG 59.452 55.000 5.69 2.38 0.00 4.45
448 449 0.257039 CAGAATAGCAAGGCCTGGGT 59.743 55.000 17.80 17.80 0.00 4.51
449 450 0.257039 AGAATAGCAAGGCCTGGGTG 59.743 55.000 22.65 10.53 0.00 4.61
450 451 1.380380 AATAGCAAGGCCTGGGTGC 60.380 57.895 22.65 20.43 38.59 5.01
451 452 2.153898 AATAGCAAGGCCTGGGTGCA 62.154 55.000 25.87 14.32 40.83 4.57
452 453 2.153898 ATAGCAAGGCCTGGGTGCAA 62.154 55.000 25.87 6.71 40.83 4.08
453 454 2.769652 TAGCAAGGCCTGGGTGCAAG 62.770 60.000 25.87 3.12 40.83 4.01
454 455 2.203538 CAAGGCCTGGGTGCAAGT 60.204 61.111 5.69 0.00 0.00 3.16
455 456 2.203538 AAGGCCTGGGTGCAAGTG 60.204 61.111 5.69 0.00 0.00 3.16
456 457 4.982701 AGGCCTGGGTGCAAGTGC 62.983 66.667 3.11 0.00 42.50 4.40
457 458 4.982701 GGCCTGGGTGCAAGTGCT 62.983 66.667 4.69 0.00 42.66 4.40
458 459 3.368571 GCCTGGGTGCAAGTGCTC 61.369 66.667 4.69 0.52 42.66 4.26
459 460 2.433446 CCTGGGTGCAAGTGCTCT 59.567 61.111 4.69 0.00 42.66 4.09
460 461 1.679311 CCTGGGTGCAAGTGCTCTA 59.321 57.895 4.69 0.00 42.66 2.43
461 462 0.036732 CCTGGGTGCAAGTGCTCTAA 59.963 55.000 4.69 0.00 42.66 2.10
462 463 1.545428 CCTGGGTGCAAGTGCTCTAAA 60.545 52.381 4.69 0.00 42.66 1.85
463 464 2.229792 CTGGGTGCAAGTGCTCTAAAA 58.770 47.619 4.69 0.00 42.66 1.52
464 465 2.622942 CTGGGTGCAAGTGCTCTAAAAA 59.377 45.455 4.69 0.00 42.66 1.94
465 466 3.230134 TGGGTGCAAGTGCTCTAAAAAT 58.770 40.909 4.69 0.00 42.66 1.82
466 467 3.255642 TGGGTGCAAGTGCTCTAAAAATC 59.744 43.478 4.69 0.00 42.66 2.17
467 468 3.507622 GGGTGCAAGTGCTCTAAAAATCT 59.492 43.478 4.69 0.00 42.66 2.40
468 469 4.479619 GGTGCAAGTGCTCTAAAAATCTG 58.520 43.478 4.69 0.00 42.66 2.90
469 470 3.916776 GTGCAAGTGCTCTAAAAATCTGC 59.083 43.478 4.69 0.59 42.66 4.26
470 471 3.166657 GCAAGTGCTCTAAAAATCTGCG 58.833 45.455 0.00 0.00 38.21 5.18
471 472 3.365364 GCAAGTGCTCTAAAAATCTGCGT 60.365 43.478 0.00 0.00 38.21 5.24
472 473 4.398247 CAAGTGCTCTAAAAATCTGCGTC 58.602 43.478 0.00 0.00 0.00 5.19
473 474 3.003480 AGTGCTCTAAAAATCTGCGTCC 58.997 45.455 0.00 0.00 0.00 4.79
474 475 2.742053 GTGCTCTAAAAATCTGCGTCCA 59.258 45.455 0.00 0.00 0.00 4.02
475 476 2.742053 TGCTCTAAAAATCTGCGTCCAC 59.258 45.455 0.00 0.00 0.00 4.02
476 477 2.222819 GCTCTAAAAATCTGCGTCCACG 60.223 50.000 0.00 0.00 43.27 4.94
486 487 3.856508 CGTCCACGCCTAACAGTG 58.143 61.111 0.00 0.00 38.05 3.66
487 488 1.006571 CGTCCACGCCTAACAGTGT 60.007 57.895 0.00 0.00 36.69 3.55
488 489 0.241749 CGTCCACGCCTAACAGTGTA 59.758 55.000 0.00 0.00 36.69 2.90
489 490 1.706443 GTCCACGCCTAACAGTGTAC 58.294 55.000 0.00 0.00 36.69 2.90
490 491 0.241749 TCCACGCCTAACAGTGTACG 59.758 55.000 0.00 1.11 36.69 3.67
491 492 0.038892 CCACGCCTAACAGTGTACGT 60.039 55.000 0.00 1.80 36.69 3.57
492 493 1.334054 CACGCCTAACAGTGTACGTC 58.666 55.000 9.69 0.00 33.97 4.34
493 494 0.242017 ACGCCTAACAGTGTACGTCC 59.758 55.000 0.00 0.00 0.00 4.79
494 495 0.524862 CGCCTAACAGTGTACGTCCT 59.475 55.000 0.00 0.00 0.00 3.85
495 496 1.731424 CGCCTAACAGTGTACGTCCTG 60.731 57.143 0.00 0.00 34.82 3.86
496 497 1.542915 GCCTAACAGTGTACGTCCTGA 59.457 52.381 14.51 0.00 32.93 3.86
497 498 2.415625 GCCTAACAGTGTACGTCCTGAG 60.416 54.545 14.51 4.82 32.93 3.35
498 499 2.163815 CCTAACAGTGTACGTCCTGAGG 59.836 54.545 14.51 0.00 32.93 3.86
499 500 1.991121 AACAGTGTACGTCCTGAGGA 58.009 50.000 14.51 0.00 32.93 3.71
500 501 2.217510 ACAGTGTACGTCCTGAGGAT 57.782 50.000 3.65 0.00 32.73 3.24
501 502 2.093106 ACAGTGTACGTCCTGAGGATC 58.907 52.381 3.65 0.00 32.73 3.36
502 503 1.064208 CAGTGTACGTCCTGAGGATCG 59.936 57.143 17.66 17.66 38.61 3.69
503 504 0.248539 GTGTACGTCCTGAGGATCGC 60.249 60.000 18.70 8.06 38.61 4.58
504 505 0.678684 TGTACGTCCTGAGGATCGCA 60.679 55.000 18.70 7.58 38.61 5.10
505 506 0.669077 GTACGTCCTGAGGATCGCAT 59.331 55.000 18.70 7.33 38.61 4.73
506 507 0.952280 TACGTCCTGAGGATCGCATC 59.048 55.000 18.70 0.00 38.61 3.91
518 519 4.999751 GGATCGCATCCTATGTTTTCTC 57.000 45.455 7.65 0.00 46.19 2.87
519 520 3.748568 GGATCGCATCCTATGTTTTCTCC 59.251 47.826 7.65 0.00 46.19 3.71
520 521 3.194005 TCGCATCCTATGTTTTCTCCC 57.806 47.619 0.00 0.00 0.00 4.30
521 522 2.158813 TCGCATCCTATGTTTTCTCCCC 60.159 50.000 0.00 0.00 0.00 4.81
522 523 2.158755 CGCATCCTATGTTTTCTCCCCT 60.159 50.000 0.00 0.00 0.00 4.79
523 524 3.685550 CGCATCCTATGTTTTCTCCCCTT 60.686 47.826 0.00 0.00 0.00 3.95
524 525 3.885901 GCATCCTATGTTTTCTCCCCTTC 59.114 47.826 0.00 0.00 0.00 3.46
525 526 4.385754 GCATCCTATGTTTTCTCCCCTTCT 60.386 45.833 0.00 0.00 0.00 2.85
526 527 5.163195 GCATCCTATGTTTTCTCCCCTTCTA 60.163 44.000 0.00 0.00 0.00 2.10
527 528 6.466470 GCATCCTATGTTTTCTCCCCTTCTAT 60.466 42.308 0.00 0.00 0.00 1.98
528 529 6.749036 TCCTATGTTTTCTCCCCTTCTATC 57.251 41.667 0.00 0.00 0.00 2.08
529 530 6.209774 TCCTATGTTTTCTCCCCTTCTATCA 58.790 40.000 0.00 0.00 0.00 2.15
530 531 6.676632 TCCTATGTTTTCTCCCCTTCTATCAA 59.323 38.462 0.00 0.00 0.00 2.57
531 532 7.350921 TCCTATGTTTTCTCCCCTTCTATCAAT 59.649 37.037 0.00 0.00 0.00 2.57
532 533 7.446625 CCTATGTTTTCTCCCCTTCTATCAATG 59.553 40.741 0.00 0.00 0.00 2.82
533 534 4.949856 TGTTTTCTCCCCTTCTATCAATGC 59.050 41.667 0.00 0.00 0.00 3.56
534 535 4.860802 TTTCTCCCCTTCTATCAATGCA 57.139 40.909 0.00 0.00 0.00 3.96
535 536 4.860802 TTCTCCCCTTCTATCAATGCAA 57.139 40.909 0.00 0.00 0.00 4.08
536 537 4.860802 TCTCCCCTTCTATCAATGCAAA 57.139 40.909 0.00 0.00 0.00 3.68
537 538 4.785301 TCTCCCCTTCTATCAATGCAAAG 58.215 43.478 0.00 0.00 0.00 2.77
538 539 4.474651 TCTCCCCTTCTATCAATGCAAAGA 59.525 41.667 0.00 0.00 0.00 2.52
539 540 5.044919 TCTCCCCTTCTATCAATGCAAAGAA 60.045 40.000 0.00 0.00 0.00 2.52
540 541 4.949856 TCCCCTTCTATCAATGCAAAGAAC 59.050 41.667 0.00 0.00 0.00 3.01
541 542 4.201950 CCCCTTCTATCAATGCAAAGAACG 60.202 45.833 0.00 0.00 0.00 3.95
542 543 4.346129 CCTTCTATCAATGCAAAGAACGC 58.654 43.478 0.00 0.00 0.00 4.84
543 544 4.142622 CCTTCTATCAATGCAAAGAACGCA 60.143 41.667 0.00 0.00 44.94 5.24
549 550 1.580942 TGCAAAGAACGCATCCTGC 59.419 52.632 0.00 6.56 40.69 4.85
570 571 3.269310 CGTATTCGCAAACAAGATACGC 58.731 45.455 0.00 0.00 31.42 4.42
571 572 2.825086 ATTCGCAAACAAGATACGCC 57.175 45.000 0.00 0.00 0.00 5.68
572 573 1.514003 TTCGCAAACAAGATACGCCA 58.486 45.000 0.00 0.00 0.00 5.69
573 574 0.793861 TCGCAAACAAGATACGCCAC 59.206 50.000 0.00 0.00 0.00 5.01
574 575 0.179200 CGCAAACAAGATACGCCACC 60.179 55.000 0.00 0.00 0.00 4.61
575 576 1.165270 GCAAACAAGATACGCCACCT 58.835 50.000 0.00 0.00 0.00 4.00
576 577 1.135689 GCAAACAAGATACGCCACCTG 60.136 52.381 0.00 0.00 0.00 4.00
577 578 2.422597 CAAACAAGATACGCCACCTGA 58.577 47.619 0.00 0.00 0.00 3.86
578 579 2.386661 AACAAGATACGCCACCTGAG 57.613 50.000 0.00 0.00 0.00 3.35
579 580 1.267121 ACAAGATACGCCACCTGAGT 58.733 50.000 0.00 0.00 0.00 3.41
580 581 2.453521 ACAAGATACGCCACCTGAGTA 58.546 47.619 0.00 0.00 0.00 2.59
581 582 2.829720 ACAAGATACGCCACCTGAGTAA 59.170 45.455 0.00 0.00 0.00 2.24
582 583 3.451178 ACAAGATACGCCACCTGAGTAAT 59.549 43.478 0.00 0.00 0.00 1.89
583 584 4.081087 ACAAGATACGCCACCTGAGTAATT 60.081 41.667 0.00 0.00 0.00 1.40
584 585 4.060038 AGATACGCCACCTGAGTAATTG 57.940 45.455 0.00 0.00 0.00 2.32
585 586 3.704566 AGATACGCCACCTGAGTAATTGA 59.295 43.478 0.00 0.00 0.00 2.57
586 587 4.345257 AGATACGCCACCTGAGTAATTGAT 59.655 41.667 0.00 0.00 0.00 2.57
587 588 3.350219 ACGCCACCTGAGTAATTGATT 57.650 42.857 0.00 0.00 0.00 2.57
588 589 3.686016 ACGCCACCTGAGTAATTGATTT 58.314 40.909 0.00 0.00 0.00 2.17
589 590 4.079253 ACGCCACCTGAGTAATTGATTTT 58.921 39.130 0.00 0.00 0.00 1.82
590 591 4.156008 ACGCCACCTGAGTAATTGATTTTC 59.844 41.667 0.00 0.00 0.00 2.29
591 592 4.438744 CGCCACCTGAGTAATTGATTTTCC 60.439 45.833 0.00 0.00 0.00 3.13
592 593 4.438744 GCCACCTGAGTAATTGATTTTCCG 60.439 45.833 0.00 0.00 0.00 4.30
593 594 4.700213 CCACCTGAGTAATTGATTTTCCGT 59.300 41.667 0.00 0.00 0.00 4.69
594 595 5.183140 CCACCTGAGTAATTGATTTTCCGTT 59.817 40.000 0.00 0.00 0.00 4.44
595 596 6.086222 CACCTGAGTAATTGATTTTCCGTTG 58.914 40.000 0.00 0.00 0.00 4.10
596 597 5.183140 ACCTGAGTAATTGATTTTCCGTTGG 59.817 40.000 0.00 0.00 0.00 3.77
597 598 5.414454 CCTGAGTAATTGATTTTCCGTTGGA 59.586 40.000 0.00 0.00 0.00 3.53
598 599 6.403636 CCTGAGTAATTGATTTTCCGTTGGAG 60.404 42.308 0.00 0.00 31.21 3.86
599 600 6.234920 TGAGTAATTGATTTTCCGTTGGAGA 58.765 36.000 0.00 0.00 31.21 3.71
600 601 6.884295 TGAGTAATTGATTTTCCGTTGGAGAT 59.116 34.615 0.00 0.00 31.21 2.75
601 602 7.393234 TGAGTAATTGATTTTCCGTTGGAGATT 59.607 33.333 0.00 0.00 31.21 2.40
602 603 8.122472 AGTAATTGATTTTCCGTTGGAGATTT 57.878 30.769 0.00 0.00 31.21 2.17
603 604 8.585018 AGTAATTGATTTTCCGTTGGAGATTTT 58.415 29.630 0.00 0.00 31.21 1.82
604 605 7.656707 AATTGATTTTCCGTTGGAGATTTTG 57.343 32.000 0.00 0.00 31.21 2.44
605 606 5.782893 TGATTTTCCGTTGGAGATTTTGT 57.217 34.783 0.00 0.00 31.21 2.83
606 607 6.155475 TGATTTTCCGTTGGAGATTTTGTT 57.845 33.333 0.00 0.00 31.21 2.83
607 608 6.578023 TGATTTTCCGTTGGAGATTTTGTTT 58.422 32.000 0.00 0.00 31.21 2.83
608 609 6.478344 TGATTTTCCGTTGGAGATTTTGTTTG 59.522 34.615 0.00 0.00 31.21 2.93
609 610 5.584253 TTTCCGTTGGAGATTTTGTTTGA 57.416 34.783 0.00 0.00 31.21 2.69
610 611 4.829064 TCCGTTGGAGATTTTGTTTGAG 57.171 40.909 0.00 0.00 0.00 3.02
611 612 3.568007 TCCGTTGGAGATTTTGTTTGAGG 59.432 43.478 0.00 0.00 0.00 3.86
612 613 3.305335 CCGTTGGAGATTTTGTTTGAGGG 60.305 47.826 0.00 0.00 0.00 4.30
613 614 3.568007 CGTTGGAGATTTTGTTTGAGGGA 59.432 43.478 0.00 0.00 0.00 4.20
614 615 4.218417 CGTTGGAGATTTTGTTTGAGGGAT 59.782 41.667 0.00 0.00 0.00 3.85
615 616 5.414454 CGTTGGAGATTTTGTTTGAGGGATA 59.586 40.000 0.00 0.00 0.00 2.59
616 617 6.095440 CGTTGGAGATTTTGTTTGAGGGATAT 59.905 38.462 0.00 0.00 0.00 1.63
617 618 7.362920 CGTTGGAGATTTTGTTTGAGGGATATT 60.363 37.037 0.00 0.00 0.00 1.28
618 619 8.314021 GTTGGAGATTTTGTTTGAGGGATATTT 58.686 33.333 0.00 0.00 0.00 1.40
619 620 8.066612 TGGAGATTTTGTTTGAGGGATATTTC 57.933 34.615 0.00 0.00 0.00 2.17
620 621 7.124147 TGGAGATTTTGTTTGAGGGATATTTCC 59.876 37.037 0.00 0.00 41.77 3.13
632 633 2.814336 GGATATTTCCCGTTGGAGATGC 59.186 50.000 0.00 0.00 43.07 3.91
633 634 2.341846 TATTTCCCGTTGGAGATGCC 57.658 50.000 0.00 0.00 43.07 4.40
634 635 0.625849 ATTTCCCGTTGGAGATGCCT 59.374 50.000 0.00 0.00 43.07 4.75
635 636 0.404040 TTTCCCGTTGGAGATGCCTT 59.596 50.000 0.00 0.00 43.07 4.35
636 637 1.281419 TTCCCGTTGGAGATGCCTTA 58.719 50.000 0.00 0.00 43.07 2.69
637 638 0.539986 TCCCGTTGGAGATGCCTTAC 59.460 55.000 0.00 0.00 35.03 2.34
638 639 0.463833 CCCGTTGGAGATGCCTTACC 60.464 60.000 0.00 0.00 37.63 2.85
649 650 0.981183 TGCCTTACCGTTGGAGATGT 59.019 50.000 0.00 0.00 0.00 3.06
691 693 0.172578 CGTTGGAGATGCTGTACCGA 59.827 55.000 0.00 0.00 0.00 4.69
707 709 1.573932 CGAGCCGATGCAAACACAA 59.426 52.632 0.00 0.00 41.13 3.33
782 795 6.025749 TCTCACTTGTCAGACGTTATCATT 57.974 37.500 0.00 0.00 0.00 2.57
788 801 7.116948 CACTTGTCAGACGTTATCATTTTCTCT 59.883 37.037 0.00 0.00 0.00 3.10
816 829 1.364626 CGCTCTGAGCATGGACAACC 61.365 60.000 27.46 0.00 42.58 3.77
822 835 0.618458 GAGCATGGACAACCCTGGTA 59.382 55.000 0.00 0.00 41.22 3.25
889 902 3.112709 GACAACTCTGGCGCGTCC 61.113 66.667 8.89 10.74 0.00 4.79
915 929 4.283337 TGTTGGCCTAGCTATACAGTACA 58.717 43.478 3.32 0.00 0.00 2.90
916 930 4.341235 TGTTGGCCTAGCTATACAGTACAG 59.659 45.833 3.32 0.00 0.00 2.74
917 931 3.497332 TGGCCTAGCTATACAGTACAGG 58.503 50.000 3.32 0.00 0.00 4.00
918 932 3.139584 TGGCCTAGCTATACAGTACAGGA 59.860 47.826 3.32 0.00 0.00 3.86
919 933 4.202684 TGGCCTAGCTATACAGTACAGGAT 60.203 45.833 3.32 0.00 0.00 3.24
922 936 5.477291 GCCTAGCTATACAGTACAGGATGAA 59.523 44.000 0.00 0.00 39.69 2.57
923 937 6.153680 GCCTAGCTATACAGTACAGGATGAAT 59.846 42.308 0.00 0.00 39.69 2.57
924 938 7.310113 GCCTAGCTATACAGTACAGGATGAATT 60.310 40.741 0.00 0.00 39.69 2.17
925 939 8.031864 CCTAGCTATACAGTACAGGATGAATTG 58.968 40.741 0.00 0.00 39.69 2.32
926 940 7.366847 AGCTATACAGTACAGGATGAATTGT 57.633 36.000 0.00 0.00 39.69 2.71
956 970 2.022129 GTGCCAAGAGGTGTCGACG 61.022 63.158 11.62 0.00 37.19 5.12
992 1009 1.424493 GCATTCTGGAACGCGGAGAG 61.424 60.000 12.47 0.10 0.00 3.20
1006 1024 2.163509 CGGAGAGGACGATCATGGTAT 58.836 52.381 0.00 0.00 0.00 2.73
1026 1044 7.874940 TGGTATGTTCATTCTCAGTTTTTCTG 58.125 34.615 0.00 0.00 44.85 3.02
1037 1055 7.703058 TCTCAGTTTTTCTGGAGTTCTTTTT 57.297 32.000 0.00 0.00 43.76 1.94
1039 1057 8.674607 TCTCAGTTTTTCTGGAGTTCTTTTTAC 58.325 33.333 0.00 0.00 43.76 2.01
1040 1058 8.343168 TCAGTTTTTCTGGAGTTCTTTTTACA 57.657 30.769 0.00 0.00 43.76 2.41
1042 1060 8.244113 CAGTTTTTCTGGAGTTCTTTTTACAGT 58.756 33.333 0.00 0.00 40.23 3.55
1043 1061 9.457436 AGTTTTTCTGGAGTTCTTTTTACAGTA 57.543 29.630 0.00 0.00 0.00 2.74
1047 1065 7.962964 TCTGGAGTTCTTTTTACAGTACATG 57.037 36.000 0.00 0.00 0.00 3.21
1062 1080 5.012148 ACAGTACATGAAGTCAGTTTAGGCT 59.988 40.000 0.00 0.00 0.00 4.58
1084 1102 5.119931 TCTTCATTTTTGTGATCCAACCG 57.880 39.130 0.00 0.00 31.20 4.44
1099 1117 3.118884 TCCAACCGCCTAGATTAGACAAC 60.119 47.826 0.00 0.00 0.00 3.32
1111 1129 8.511321 CCTAGATTAGACAACAGTATAGCAGAG 58.489 40.741 0.00 0.00 0.00 3.35
1120 1138 7.091443 ACAACAGTATAGCAGAGTTCTTGTAC 58.909 38.462 0.00 0.00 0.00 2.90
1124 1142 7.136119 CAGTATAGCAGAGTTCTTGTACTAGC 58.864 42.308 0.00 0.00 32.47 3.42
1125 1143 6.829298 AGTATAGCAGAGTTCTTGTACTAGCA 59.171 38.462 0.00 0.00 33.88 3.49
1126 1144 4.181309 AGCAGAGTTCTTGTACTAGCAC 57.819 45.455 0.00 0.00 33.88 4.40
1181 1370 5.956068 AATCTTTTTCAGGAACAGAGAGC 57.044 39.130 0.00 0.00 0.00 4.09
1183 1372 4.130118 TCTTTTTCAGGAACAGAGAGCAC 58.870 43.478 0.00 0.00 0.00 4.40
1226 1415 1.119574 ACCTACAGGCAACGGAGTGT 61.120 55.000 0.00 0.00 39.36 3.55
1267 1459 1.447317 GCCCATCGATGCCAACGAAT 61.447 55.000 20.25 0.00 42.80 3.34
1269 1461 1.586422 CCATCGATGCCAACGAATCT 58.414 50.000 20.25 0.00 42.80 2.40
1272 1464 1.089481 TCGATGCCAACGAATCTGCC 61.089 55.000 0.00 0.00 36.84 4.85
1539 1779 3.703127 GGACTGGACCCGGACACC 61.703 72.222 0.73 3.49 0.00 4.16
1815 2063 0.179108 ACTGGAGCGCGTATTTCCTC 60.179 55.000 8.43 4.10 32.12 3.71
1872 2120 0.329596 ACATCAGGAACAAGAGGGCC 59.670 55.000 0.00 0.00 0.00 5.80
1885 2133 1.078426 AGGGCCACGACTACAATGC 60.078 57.895 6.18 0.00 0.00 3.56
1902 2150 2.401766 GCTGATCACTGGTTGCCCG 61.402 63.158 0.00 0.00 0.00 6.13
1927 2175 5.934402 TCTCCTACAGGTAATTTCAGACC 57.066 43.478 0.00 0.00 36.34 3.85
1930 2178 6.154706 TCTCCTACAGGTAATTTCAGACCTTC 59.845 42.308 0.00 0.00 43.87 3.46
1934 2182 7.665974 CCTACAGGTAATTTCAGACCTTCTTTT 59.334 37.037 0.00 0.00 43.87 2.27
1935 2183 7.898014 ACAGGTAATTTCAGACCTTCTTTTT 57.102 32.000 0.00 0.00 43.87 1.94
1976 2224 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1977 2225 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1978 2226 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1979 2227 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1980 2228 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1981 2229 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1982 2230 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1983 2231 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1984 2232 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1985 2233 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1986 2234 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1987 2235 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1988 2236 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1989 2237 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1990 2238 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1991 2239 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1992 2240 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1993 2241 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1994 2242 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1995 2243 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1996 2244 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1997 2245 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1998 2246 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1999 2247 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2000 2248 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2001 2249 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2002 2250 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2003 2251 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2004 2252 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2005 2253 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2027 2275 5.810095 TCTCTCTCTCTACATGAGTTCACA 58.190 41.667 0.00 0.00 43.13 3.58
2028 2278 6.422333 TCTCTCTCTCTACATGAGTTCACAT 58.578 40.000 0.00 0.00 43.13 3.21
2109 2359 1.774894 GCCACACTTGGTGTCCCCTA 61.775 60.000 0.00 0.00 43.92 3.53
2117 2367 1.809133 TGGTGTCCCCTAGTGTCAAA 58.191 50.000 0.00 0.00 0.00 2.69
2118 2368 2.344592 TGGTGTCCCCTAGTGTCAAAT 58.655 47.619 0.00 0.00 0.00 2.32
2154 2404 3.245797 ACACTCGTCAACAAGATGATCG 58.754 45.455 0.00 0.00 41.30 3.69
2180 2430 3.278574 CGATAAGCCACCCAAGATTTCA 58.721 45.455 0.00 0.00 0.00 2.69
2183 2433 0.962356 AGCCACCCAAGATTTCAGCG 60.962 55.000 0.00 0.00 0.00 5.18
2202 2452 2.001803 CAAGGGGAGCCATCCTTCA 58.998 57.895 0.00 0.00 45.85 3.02
2203 2453 0.332632 CAAGGGGAGCCATCCTTCAA 59.667 55.000 0.00 0.00 45.85 2.69
2232 2482 5.173664 GTGGCGTAAGTACCTTAGAATTGT 58.826 41.667 0.00 0.00 41.68 2.71
2259 2509 7.639113 TTTTTGTACTCCTTTTGTCTCATGT 57.361 32.000 0.00 0.00 0.00 3.21
2263 2513 7.962964 TGTACTCCTTTTGTCTCATGTTAAG 57.037 36.000 0.00 0.00 0.00 1.85
2311 2561 0.869454 CGCCGAGAAGAGTCATGCTC 60.869 60.000 8.56 8.56 44.45 4.26
2330 2580 0.681733 CCATGACTACGGATCCAGGG 59.318 60.000 13.41 0.00 0.00 4.45
2384 2634 4.233558 GGTGCACCCAAACCCCCT 62.234 66.667 26.31 0.00 0.00 4.79
2386 2636 3.106609 TGCACCCAAACCCCCTCA 61.107 61.111 0.00 0.00 0.00 3.86
2387 2637 2.600470 GCACCCAAACCCCCTCAC 60.600 66.667 0.00 0.00 0.00 3.51
2447 2697 2.405892 ACAATGCAAACGACTTCTGC 57.594 45.000 0.00 0.00 36.60 4.26
2449 2699 1.069973 CAATGCAAACGACTTCTGCGA 60.070 47.619 0.00 0.00 38.97 5.10
2450 2700 0.792640 ATGCAAACGACTTCTGCGAG 59.207 50.000 0.00 0.00 38.97 5.03
2459 2709 3.001330 ACGACTTCTGCGAGTTTTTGAAG 59.999 43.478 0.00 0.00 39.72 3.02
2475 2725 0.953003 GAAGGAGAGATACCCGGACG 59.047 60.000 0.73 0.00 0.00 4.79
2480 2730 1.536331 GAGAGATACCCGGACGTGATC 59.464 57.143 0.73 0.00 0.00 2.92
2522 2772 5.404946 CATTTGAAGTTCCACAATGCTAGG 58.595 41.667 0.00 0.00 0.00 3.02
2598 2848 1.205179 TCGCGGCCAAAATACTAGACA 59.795 47.619 6.13 0.00 0.00 3.41
2599 2849 1.326548 CGCGGCCAAAATACTAGACAC 59.673 52.381 2.24 0.00 0.00 3.67
2600 2850 1.326548 GCGGCCAAAATACTAGACACG 59.673 52.381 2.24 0.00 0.00 4.49
2601 2851 1.326548 CGGCCAAAATACTAGACACGC 59.673 52.381 2.24 0.00 0.00 5.34
2602 2852 2.352388 GGCCAAAATACTAGACACGCA 58.648 47.619 0.00 0.00 0.00 5.24
2603 2853 2.351726 GGCCAAAATACTAGACACGCAG 59.648 50.000 0.00 0.00 0.00 5.18
2688 2938 3.678072 CGCTAGTGATTCTGAAACCGAAA 59.322 43.478 0.00 0.00 0.00 3.46
2696 2946 5.466728 TGATTCTGAAACCGAAACAGAGAAG 59.533 40.000 0.00 0.00 40.82 2.85
2720 2970 1.177401 GAGCCAGGACCCATGAAAAC 58.823 55.000 0.00 0.00 0.00 2.43
2724 2974 1.548582 CCAGGACCCATGAAAACAGCT 60.549 52.381 0.00 0.00 0.00 4.24
2725 2975 1.542915 CAGGACCCATGAAAACAGCTG 59.457 52.381 13.48 13.48 0.00 4.24
2732 2982 1.822990 CATGAAAACAGCTGGCCAGAT 59.177 47.619 37.21 29.54 0.00 2.90
2733 2983 2.877097 TGAAAACAGCTGGCCAGATA 57.123 45.000 37.21 11.37 0.00 1.98
2734 2984 3.370840 TGAAAACAGCTGGCCAGATAT 57.629 42.857 37.21 18.76 0.00 1.63
3026 3327 2.237893 TGTGATGTGATCAGTGGCAGAT 59.762 45.455 0.00 0.00 40.53 2.90
3051 3352 1.185315 GCAAGAATTAAGCAGGGGCA 58.815 50.000 0.00 0.00 44.61 5.36
3078 3379 1.978580 GTCTTTGAGGGAGTTGAGGGA 59.021 52.381 0.00 0.00 0.00 4.20
3079 3380 2.372172 GTCTTTGAGGGAGTTGAGGGAA 59.628 50.000 0.00 0.00 0.00 3.97
3084 3385 2.904434 TGAGGGAGTTGAGGGAACTAAC 59.096 50.000 0.00 0.00 45.48 2.34
3213 3515 8.831550 GGTTAATCTCATGGATAGACAAGTTTC 58.168 37.037 0.00 0.00 33.71 2.78
3458 6347 7.756558 AGATATTACTTGAGTTTTGCTTCAGC 58.243 34.615 0.00 0.00 42.50 4.26
3485 6374 4.344390 AGTTAGACCTTCCGAAACAGTTCT 59.656 41.667 0.00 0.00 0.00 3.01
3489 6378 4.065789 GACCTTCCGAAACAGTTCTTGAT 58.934 43.478 0.00 0.00 0.00 2.57
3517 6475 5.662674 ATGTTATCGGATAGAAGGGTAGC 57.337 43.478 0.00 0.00 0.00 3.58
3518 6476 3.830755 TGTTATCGGATAGAAGGGTAGCC 59.169 47.826 1.60 1.60 0.00 3.93
3521 6479 0.969894 CGGATAGAAGGGTAGCCTGG 59.030 60.000 15.71 0.00 0.00 4.45
3525 6483 0.264955 TAGAAGGGTAGCCTGGGGAG 59.735 60.000 15.71 0.00 0.00 4.30
3530 6488 0.914902 GGGTAGCCTGGGGAGTCTTT 60.915 60.000 2.95 0.00 0.00 2.52
3531 6490 0.253327 GGTAGCCTGGGGAGTCTTTG 59.747 60.000 0.00 0.00 0.00 2.77
3534 6493 1.742308 AGCCTGGGGAGTCTTTGTTA 58.258 50.000 0.00 0.00 0.00 2.41
3536 6495 2.025887 AGCCTGGGGAGTCTTTGTTATG 60.026 50.000 0.00 0.00 0.00 1.90
3545 6504 6.239629 GGGGAGTCTTTGTTATGTAGGGATAG 60.240 46.154 0.00 0.00 0.00 2.08
3582 6541 4.681744 TGAAACCAACAACTCAAAGATGC 58.318 39.130 0.00 0.00 0.00 3.91
3590 6549 4.582869 ACAACTCAAAGATGCTGCTATCA 58.417 39.130 0.00 0.00 0.00 2.15
3593 6552 6.259608 ACAACTCAAAGATGCTGCTATCATAC 59.740 38.462 0.00 0.00 0.00 2.39
3595 6554 5.163269 ACTCAAAGATGCTGCTATCATACCA 60.163 40.000 0.00 0.00 0.00 3.25
3605 6564 5.010719 GCTGCTATCATACCAGTGGTTACTA 59.989 44.000 22.49 1.71 37.09 1.82
3606 6565 6.401047 TGCTATCATACCAGTGGTTACTAC 57.599 41.667 22.49 5.37 37.09 2.73
3611 6570 9.352191 CTATCATACCAGTGGTTACTACTTAGT 57.648 37.037 22.49 2.84 37.09 2.24
3612 6571 8.605325 ATCATACCAGTGGTTACTACTTAGTT 57.395 34.615 22.49 0.00 37.09 2.24
3613 6572 9.705103 ATCATACCAGTGGTTACTACTTAGTTA 57.295 33.333 22.49 0.00 37.09 2.24
3614 6573 9.182214 TCATACCAGTGGTTACTACTTAGTTAG 57.818 37.037 22.49 0.00 37.09 2.34
3615 6574 6.278172 ACCAGTGGTTACTACTTAGTTAGC 57.722 41.667 9.70 0.00 37.73 3.09
3616 6575 5.776716 ACCAGTGGTTACTACTTAGTTAGCA 59.223 40.000 9.70 3.77 39.88 3.49
3619 6578 8.186178 CAGTGGTTACTACTTAGTTAGCAATG 57.814 38.462 15.97 15.97 45.69 2.82
3622 6581 9.211485 GTGGTTACTACTTAGTTAGCAATGAAA 57.789 33.333 8.44 0.00 42.49 2.69
3660 6619 3.186909 GTTCTTGTTTCAGTTTGGTGGC 58.813 45.455 0.00 0.00 0.00 5.01
3663 6622 1.846007 TGTTTCAGTTTGGTGGCTGT 58.154 45.000 0.00 0.00 34.57 4.40
3666 6625 1.846007 TTCAGTTTGGTGGCTGTTGT 58.154 45.000 0.00 0.00 34.57 3.32
3667 6626 1.102154 TCAGTTTGGTGGCTGTTGTG 58.898 50.000 0.00 0.00 34.57 3.33
3670 6629 2.101249 CAGTTTGGTGGCTGTTGTGAAT 59.899 45.455 0.00 0.00 0.00 2.57
3671 6630 2.101249 AGTTTGGTGGCTGTTGTGAATG 59.899 45.455 0.00 0.00 0.00 2.67
3673 6632 2.647683 TGGTGGCTGTTGTGAATGTA 57.352 45.000 0.00 0.00 0.00 2.29
3674 6633 2.503331 TGGTGGCTGTTGTGAATGTAG 58.497 47.619 0.00 0.00 0.00 2.74
3675 6634 2.158682 TGGTGGCTGTTGTGAATGTAGT 60.159 45.455 0.00 0.00 0.00 2.73
3687 6654 3.486108 GTGAATGTAGTAAGATCGTGCCG 59.514 47.826 0.00 0.00 0.00 5.69
3688 6655 3.129813 TGAATGTAGTAAGATCGTGCCGT 59.870 43.478 0.00 0.00 0.00 5.68
3703 6670 2.224079 GTGCCGTATTGTGATGCATAGG 59.776 50.000 0.00 0.00 34.04 2.57
3714 6681 2.093500 TGATGCATAGGCGAGACACTTT 60.093 45.455 0.00 0.00 45.35 2.66
3718 6714 2.417379 GCATAGGCGAGACACTTTCTGA 60.417 50.000 0.00 0.00 33.22 3.27
3720 6716 1.333177 AGGCGAGACACTTTCTGAGT 58.667 50.000 0.00 0.00 39.89 3.41
3723 6719 2.288518 GGCGAGACACTTTCTGAGTCTT 60.289 50.000 0.00 0.00 44.55 3.01
3728 6724 5.049336 CGAGACACTTTCTGAGTCTTCTACA 60.049 44.000 0.00 0.00 44.55 2.74
3737 6733 5.844004 TCTGAGTCTTCTACAGAAACAACC 58.156 41.667 0.00 0.00 37.66 3.77
3738 6734 4.957296 TGAGTCTTCTACAGAAACAACCC 58.043 43.478 0.00 0.00 31.28 4.11
3740 6736 5.071788 TGAGTCTTCTACAGAAACAACCCAT 59.928 40.000 0.00 0.00 31.28 4.00
3766 6965 9.366216 TGTTACTATTATGAGCAACTGTACTTG 57.634 33.333 0.00 0.00 0.00 3.16
3770 6969 8.198109 ACTATTATGAGCAACTGTACTTGGTAG 58.802 37.037 0.09 0.00 32.01 3.18
3781 6980 8.709646 CAACTGTACTTGGTAGAATAAACTGTC 58.290 37.037 0.00 0.00 0.00 3.51
3784 6983 9.436957 CTGTACTTGGTAGAATAAACTGTCAAT 57.563 33.333 0.00 0.00 0.00 2.57
3793 6992 9.708222 GTAGAATAAACTGTCAATGCATAACTG 57.292 33.333 0.00 8.42 0.00 3.16
3803 7015 6.150976 TGTCAATGCATAACTGGAAGGTTAAG 59.849 38.462 0.00 0.00 39.30 1.85
3804 7016 6.374333 GTCAATGCATAACTGGAAGGTTAAGA 59.626 38.462 0.00 0.00 39.30 2.10
3805 7017 6.374333 TCAATGCATAACTGGAAGGTTAAGAC 59.626 38.462 0.00 0.00 39.30 3.01
3808 7020 6.065374 TGCATAACTGGAAGGTTAAGACAAA 58.935 36.000 0.00 0.00 39.30 2.83
3809 7021 6.547880 TGCATAACTGGAAGGTTAAGACAAAA 59.452 34.615 0.00 0.00 39.30 2.44
3819 7031 7.913821 GGAAGGTTAAGACAAAACACTTGTAAG 59.086 37.037 0.00 0.00 31.96 2.34
3828 7040 8.237267 AGACAAAACACTTGTAAGTTTCAGAAG 58.763 33.333 0.00 0.00 36.98 2.85
3861 7073 4.095036 GCTGTAATTTACAAGAGCCCACTC 59.905 45.833 10.32 0.00 38.38 3.51
3862 7074 4.250464 TGTAATTTACAAGAGCCCACTCG 58.750 43.478 6.79 0.00 39.85 4.18
3863 7075 4.262721 TGTAATTTACAAGAGCCCACTCGT 60.263 41.667 6.79 0.00 39.85 4.18
3869 7081 4.427394 GAGCCCACTCGTGCATAG 57.573 61.111 0.00 0.00 32.04 2.23
3874 7086 1.406341 GCCCACTCGTGCATAGGTTTA 60.406 52.381 0.00 0.00 0.00 2.01
3879 7091 5.587043 CCCACTCGTGCATAGGTTTAAATTA 59.413 40.000 0.00 0.00 0.00 1.40
3880 7092 6.094325 CCCACTCGTGCATAGGTTTAAATTAA 59.906 38.462 0.00 0.00 0.00 1.40
3881 7093 7.201785 CCCACTCGTGCATAGGTTTAAATTAAT 60.202 37.037 0.00 0.00 0.00 1.40
3882 7094 8.188139 CCACTCGTGCATAGGTTTAAATTAATT 58.812 33.333 0.00 0.00 0.00 1.40
3907 7119 6.750148 ACATCTAACTAATCATCTTCCCGAC 58.250 40.000 0.00 0.00 0.00 4.79
3916 7128 1.025812 ATCTTCCCGACGAGCTACAG 58.974 55.000 0.00 0.00 0.00 2.74
3939 7151 7.037438 CAGCTACTTGTGATTTAATTTGGCAT 58.963 34.615 0.00 0.00 0.00 4.40
3945 7157 9.941325 ACTTGTGATTTAATTTGGCATATTTCA 57.059 25.926 8.45 4.32 0.00 2.69
3983 7195 6.430451 GTTGTAGTCAACCAAGTTTCAGATG 58.570 40.000 0.30 0.00 45.60 2.90
3985 7197 5.758296 TGTAGTCAACCAAGTTTCAGATGTC 59.242 40.000 0.00 0.00 0.00 3.06
3991 7203 2.485426 CCAAGTTTCAGATGTCGCACAT 59.515 45.455 2.02 2.02 42.43 3.21
3992 7204 3.485633 CAAGTTTCAGATGTCGCACATG 58.514 45.455 6.52 0.00 39.27 3.21
3993 7205 2.771089 AGTTTCAGATGTCGCACATGT 58.229 42.857 6.52 0.00 39.27 3.21
3994 7206 3.141398 AGTTTCAGATGTCGCACATGTT 58.859 40.909 0.00 0.00 39.27 2.71
3995 7207 3.187227 AGTTTCAGATGTCGCACATGTTC 59.813 43.478 0.00 0.00 39.27 3.18
3996 7208 2.749280 TCAGATGTCGCACATGTTCT 57.251 45.000 0.00 0.00 39.27 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 3.989698 ATCGCAGTTCGCACCCGAG 62.990 63.158 5.07 0.00 45.35 4.63
16 17 3.853330 CATCGCAGTTCGCACCCG 61.853 66.667 0.00 0.00 42.60 5.28
17 18 4.166011 GCATCGCAGTTCGCACCC 62.166 66.667 0.00 0.00 42.60 4.61
18 19 4.505217 CGCATCGCAGTTCGCACC 62.505 66.667 0.00 0.00 42.60 5.01
19 20 3.010585 TTCGCATCGCAGTTCGCAC 62.011 57.895 0.00 0.00 42.60 5.34
20 21 2.736615 TTCGCATCGCAGTTCGCA 60.737 55.556 0.00 0.00 42.60 5.10
21 22 2.276058 GTTCGCATCGCAGTTCGC 60.276 61.111 0.00 0.00 38.27 4.70
22 23 1.057822 CTGTTCGCATCGCAGTTCG 59.942 57.895 0.00 0.00 40.15 3.95
24 25 0.512952 GTTCTGTTCGCATCGCAGTT 59.487 50.000 0.00 0.00 0.00 3.16
25 26 1.617755 CGTTCTGTTCGCATCGCAGT 61.618 55.000 0.00 0.00 0.00 4.40
26 27 1.057822 CGTTCTGTTCGCATCGCAG 59.942 57.895 0.00 0.00 0.00 5.18
28 29 0.043822 GATCGTTCTGTTCGCATCGC 60.044 55.000 0.00 0.00 0.00 4.58
29 30 0.224746 CGATCGTTCTGTTCGCATCG 59.775 55.000 7.03 0.00 33.48 3.84
30 31 1.545759 TCGATCGTTCTGTTCGCATC 58.454 50.000 15.94 0.00 39.18 3.91
31 32 1.854743 CATCGATCGTTCTGTTCGCAT 59.145 47.619 15.94 0.00 39.18 4.73
33 34 0.043822 GCATCGATCGTTCTGTTCGC 60.044 55.000 15.94 1.64 39.18 4.70
34 35 1.253800 CAGCATCGATCGTTCTGTTCG 59.746 52.381 15.94 0.00 40.37 3.95
35 36 1.005557 GCAGCATCGATCGTTCTGTTC 60.006 52.381 23.58 12.22 0.00 3.18
37 38 1.142185 CGCAGCATCGATCGTTCTGT 61.142 55.000 23.58 5.35 0.00 3.41
38 39 0.867329 TCGCAGCATCGATCGTTCTG 60.867 55.000 15.94 19.12 33.02 3.02
39 40 0.179137 TTCGCAGCATCGATCGTTCT 60.179 50.000 15.94 7.78 38.37 3.01
40 41 0.228238 CTTCGCAGCATCGATCGTTC 59.772 55.000 15.94 5.51 38.37 3.95
41 42 1.148157 CCTTCGCAGCATCGATCGTT 61.148 55.000 15.94 3.47 38.37 3.85
42 43 1.589993 CCTTCGCAGCATCGATCGT 60.590 57.895 15.94 0.00 38.37 3.73
43 44 1.589993 ACCTTCGCAGCATCGATCG 60.590 57.895 9.36 9.36 38.37 3.69
44 45 1.493950 CCACCTTCGCAGCATCGATC 61.494 60.000 0.00 0.00 38.37 3.69
45 46 1.522355 CCACCTTCGCAGCATCGAT 60.522 57.895 0.00 0.00 38.37 3.59
46 47 2.125552 CCACCTTCGCAGCATCGA 60.126 61.111 0.00 0.00 36.60 3.59
47 48 1.699656 CTTCCACCTTCGCAGCATCG 61.700 60.000 0.00 0.00 0.00 3.84
48 49 1.372087 CCTTCCACCTTCGCAGCATC 61.372 60.000 0.00 0.00 0.00 3.91
49 50 1.377725 CCTTCCACCTTCGCAGCAT 60.378 57.895 0.00 0.00 0.00 3.79
50 51 2.032528 CCTTCCACCTTCGCAGCA 59.967 61.111 0.00 0.00 0.00 4.41
51 52 2.543067 ATCCCTTCCACCTTCGCAGC 62.543 60.000 0.00 0.00 0.00 5.25
52 53 0.745845 CATCCCTTCCACCTTCGCAG 60.746 60.000 0.00 0.00 0.00 5.18
53 54 1.299648 CATCCCTTCCACCTTCGCA 59.700 57.895 0.00 0.00 0.00 5.10
55 56 1.452108 GGCATCCCTTCCACCTTCG 60.452 63.158 0.00 0.00 0.00 3.79
56 57 1.452108 CGGCATCCCTTCCACCTTC 60.452 63.158 0.00 0.00 0.00 3.46
57 58 2.677228 CGGCATCCCTTCCACCTT 59.323 61.111 0.00 0.00 0.00 3.50
58 59 3.411517 CCGGCATCCCTTCCACCT 61.412 66.667 0.00 0.00 0.00 4.00
59 60 3.282374 AACCGGCATCCCTTCCACC 62.282 63.158 0.00 0.00 0.00 4.61
60 61 1.749258 GAACCGGCATCCCTTCCAC 60.749 63.158 0.00 0.00 0.00 4.02
61 62 2.674754 GAACCGGCATCCCTTCCA 59.325 61.111 0.00 0.00 0.00 3.53
62 63 2.513897 CGAACCGGCATCCCTTCC 60.514 66.667 0.00 0.00 0.00 3.46
63 64 1.814169 GACGAACCGGCATCCCTTC 60.814 63.158 0.00 0.00 33.63 3.46
66 67 4.851179 GGGACGAACCGGCATCCC 62.851 72.222 15.08 15.08 44.07 3.85
67 68 2.428925 TAGGGACGAACCGGCATCC 61.429 63.158 0.00 2.95 36.10 3.51
68 69 1.227176 GTAGGGACGAACCGGCATC 60.227 63.158 0.00 0.00 36.10 3.91
69 70 2.897972 GTAGGGACGAACCGGCAT 59.102 61.111 0.00 0.00 36.10 4.40
79 80 0.450983 CCGAGTTCAGACGTAGGGAC 59.549 60.000 0.00 0.00 0.00 4.46
82 83 1.003759 CGATCCGAGTTCAGACGTAGG 60.004 57.143 0.00 0.00 0.00 3.18
83 84 1.931841 TCGATCCGAGTTCAGACGTAG 59.068 52.381 0.00 0.00 0.00 3.51
84 85 2.014335 TCGATCCGAGTTCAGACGTA 57.986 50.000 0.00 0.00 0.00 3.57
85 86 1.331138 GATCGATCCGAGTTCAGACGT 59.669 52.381 14.76 0.00 39.91 4.34
86 87 1.657816 CGATCGATCCGAGTTCAGACG 60.658 57.143 19.51 0.07 39.91 4.18
87 88 1.598132 TCGATCGATCCGAGTTCAGAC 59.402 52.381 19.51 0.00 39.91 3.51
88 89 1.949465 TCGATCGATCCGAGTTCAGA 58.051 50.000 19.51 5.62 39.91 3.27
89 90 2.579541 CATCGATCGATCCGAGTTCAG 58.420 52.381 27.20 9.55 39.91 3.02
90 91 1.266989 CCATCGATCGATCCGAGTTCA 59.733 52.381 27.20 0.00 39.91 3.18
91 92 1.401670 CCCATCGATCGATCCGAGTTC 60.402 57.143 27.20 0.00 39.91 3.01
92 93 0.598562 CCCATCGATCGATCCGAGTT 59.401 55.000 27.20 3.21 39.91 3.01
93 94 0.250770 TCCCATCGATCGATCCGAGT 60.251 55.000 27.20 4.02 39.91 4.18
94 95 1.098869 ATCCCATCGATCGATCCGAG 58.901 55.000 27.20 15.84 39.91 4.63
95 96 1.545841 AATCCCATCGATCGATCCGA 58.454 50.000 27.20 23.16 41.13 4.55
116 117 6.971527 AATACACGTCCATCATCGTAAAAA 57.028 33.333 0.00 0.00 38.52 1.94
117 118 6.369340 ACAAATACACGTCCATCATCGTAAAA 59.631 34.615 0.00 0.00 38.52 1.52
118 119 5.870433 ACAAATACACGTCCATCATCGTAAA 59.130 36.000 0.00 0.00 38.52 2.01
120 121 4.801516 CACAAATACACGTCCATCATCGTA 59.198 41.667 0.00 0.00 38.52 3.43
121 122 3.616821 CACAAATACACGTCCATCATCGT 59.383 43.478 0.00 0.00 40.99 3.73
122 123 3.001228 CCACAAATACACGTCCATCATCG 59.999 47.826 0.00 0.00 0.00 3.84
123 124 3.938963 ACCACAAATACACGTCCATCATC 59.061 43.478 0.00 0.00 0.00 2.92
124 125 3.689161 CACCACAAATACACGTCCATCAT 59.311 43.478 0.00 0.00 0.00 2.45
125 126 3.070748 CACCACAAATACACGTCCATCA 58.929 45.455 0.00 0.00 0.00 3.07
126 127 3.071479 ACACCACAAATACACGTCCATC 58.929 45.455 0.00 0.00 0.00 3.51
127 128 2.811431 CACACCACAAATACACGTCCAT 59.189 45.455 0.00 0.00 0.00 3.41
129 130 1.069500 GCACACCACAAATACACGTCC 60.069 52.381 0.00 0.00 0.00 4.79
130 131 1.871039 AGCACACCACAAATACACGTC 59.129 47.619 0.00 0.00 0.00 4.34
131 132 1.871039 GAGCACACCACAAATACACGT 59.129 47.619 0.00 0.00 0.00 4.49
132 133 1.196808 GGAGCACACCACAAATACACG 59.803 52.381 0.00 0.00 0.00 4.49
136 137 2.235016 GGTTGGAGCACACCACAAATA 58.765 47.619 0.00 0.00 39.85 1.40
137 138 1.039856 GGTTGGAGCACACCACAAAT 58.960 50.000 0.00 0.00 39.85 2.32
138 139 0.323816 TGGTTGGAGCACACCACAAA 60.324 50.000 0.00 0.00 39.85 2.83
139 140 0.106268 ATGGTTGGAGCACACCACAA 60.106 50.000 0.00 0.00 39.85 3.33
141 142 1.039856 AAATGGTTGGAGCACACCAC 58.960 50.000 0.00 0.00 39.85 4.16
142 143 1.039068 CAAATGGTTGGAGCACACCA 58.961 50.000 0.00 0.00 38.24 4.17
143 144 3.892200 CAAATGGTTGGAGCACACC 57.108 52.632 0.00 0.00 0.00 4.16
152 153 2.656055 CCACGGCCCAAATGGTTG 59.344 61.111 0.00 0.00 36.04 3.77
154 155 4.299796 AGCCACGGCCCAAATGGT 62.300 61.111 3.95 0.00 43.17 3.55
155 156 3.762247 CAGCCACGGCCCAAATGG 61.762 66.667 3.95 0.77 43.17 3.16
156 157 2.573083 AACAGCCACGGCCCAAATG 61.573 57.895 3.95 0.00 43.17 2.32
157 158 2.203625 AACAGCCACGGCCCAAAT 60.204 55.556 3.95 0.00 43.17 2.32
158 159 3.222855 CAACAGCCACGGCCCAAA 61.223 61.111 3.95 0.00 43.17 3.28
159 160 4.196778 TCAACAGCCACGGCCCAA 62.197 61.111 3.95 0.00 43.17 4.12
160 161 4.641645 CTCAACAGCCACGGCCCA 62.642 66.667 3.95 0.00 43.17 5.36
169 170 2.960170 CTGCAAGGCCTCAACAGC 59.040 61.111 5.23 6.43 0.00 4.40
180 181 2.951642 TCCACACTCTTTTTCCTGCAAG 59.048 45.455 0.00 0.00 0.00 4.01
182 183 2.092429 AGTCCACACTCTTTTTCCTGCA 60.092 45.455 0.00 0.00 0.00 4.41
183 184 2.291741 CAGTCCACACTCTTTTTCCTGC 59.708 50.000 0.00 0.00 0.00 4.85
184 185 2.291741 GCAGTCCACACTCTTTTTCCTG 59.708 50.000 0.00 0.00 0.00 3.86
185 186 2.173569 AGCAGTCCACACTCTTTTTCCT 59.826 45.455 0.00 0.00 0.00 3.36
187 188 2.291741 CCAGCAGTCCACACTCTTTTTC 59.708 50.000 0.00 0.00 0.00 2.29
188 189 2.301346 CCAGCAGTCCACACTCTTTTT 58.699 47.619 0.00 0.00 0.00 1.94
189 190 1.477558 CCCAGCAGTCCACACTCTTTT 60.478 52.381 0.00 0.00 0.00 2.27
191 192 1.757306 CCCAGCAGTCCACACTCTT 59.243 57.895 0.00 0.00 0.00 2.85
192 193 2.888447 GCCCAGCAGTCCACACTCT 61.888 63.158 0.00 0.00 0.00 3.24
194 195 1.536418 TAGCCCAGCAGTCCACACT 60.536 57.895 0.00 0.00 0.00 3.55
195 196 1.078848 CTAGCCCAGCAGTCCACAC 60.079 63.158 0.00 0.00 0.00 3.82
196 197 3.392228 CTAGCCCAGCAGTCCACA 58.608 61.111 0.00 0.00 0.00 4.17
205 206 1.446907 CACAAACAGAGCTAGCCCAG 58.553 55.000 12.13 0.00 0.00 4.45
207 208 0.678048 CCCACAAACAGAGCTAGCCC 60.678 60.000 12.13 0.00 0.00 5.19
208 209 1.308783 GCCCACAAACAGAGCTAGCC 61.309 60.000 12.13 2.81 0.00 3.93
209 210 1.639298 CGCCCACAAACAGAGCTAGC 61.639 60.000 6.62 6.62 0.00 3.42
210 211 0.320771 ACGCCCACAAACAGAGCTAG 60.321 55.000 0.00 0.00 0.00 3.42
211 212 0.970640 TACGCCCACAAACAGAGCTA 59.029 50.000 0.00 0.00 0.00 3.32
212 213 0.324943 ATACGCCCACAAACAGAGCT 59.675 50.000 0.00 0.00 0.00 4.09
213 214 0.447801 CATACGCCCACAAACAGAGC 59.552 55.000 0.00 0.00 0.00 4.09
214 215 1.464608 CACATACGCCCACAAACAGAG 59.535 52.381 0.00 0.00 0.00 3.35
216 217 1.234821 ACACATACGCCCACAAACAG 58.765 50.000 0.00 0.00 0.00 3.16
217 218 2.545537 TACACATACGCCCACAAACA 57.454 45.000 0.00 0.00 0.00 2.83
218 219 3.004171 TGATACACATACGCCCACAAAC 58.996 45.455 0.00 0.00 0.00 2.93
219 220 3.266636 CTGATACACATACGCCCACAAA 58.733 45.455 0.00 0.00 0.00 2.83
220 221 2.235155 ACTGATACACATACGCCCACAA 59.765 45.455 0.00 0.00 0.00 3.33
221 222 1.828595 ACTGATACACATACGCCCACA 59.171 47.619 0.00 0.00 0.00 4.17
222 223 2.596904 ACTGATACACATACGCCCAC 57.403 50.000 0.00 0.00 0.00 4.61
225 226 5.734855 AATGAAACTGATACACATACGCC 57.265 39.130 0.00 0.00 0.00 5.68
295 296 7.180051 ACTGAATACCCATTATTCTTGGCAAAA 59.820 33.333 0.00 0.00 44.64 2.44
296 297 6.667414 ACTGAATACCCATTATTCTTGGCAAA 59.333 34.615 0.00 0.00 44.64 3.68
297 298 6.194235 ACTGAATACCCATTATTCTTGGCAA 58.806 36.000 0.00 0.00 44.64 4.52
299 300 6.096846 ACAACTGAATACCCATTATTCTTGGC 59.903 38.462 5.79 0.00 44.64 4.52
300 301 7.645058 ACAACTGAATACCCATTATTCTTGG 57.355 36.000 5.79 0.00 44.64 3.61
301 302 8.739039 TCAACAACTGAATACCCATTATTCTTG 58.261 33.333 5.79 5.48 44.64 3.02
302 303 8.877864 TCAACAACTGAATACCCATTATTCTT 57.122 30.769 5.79 0.00 44.64 2.52
303 304 8.877864 TTCAACAACTGAATACCCATTATTCT 57.122 30.769 5.79 0.00 44.64 2.40
317 318 3.221771 CCCACCTCAATTCAACAACTGA 58.778 45.455 0.00 0.00 0.00 3.41
318 319 2.288395 GCCCACCTCAATTCAACAACTG 60.288 50.000 0.00 0.00 0.00 3.16
319 320 1.963515 GCCCACCTCAATTCAACAACT 59.036 47.619 0.00 0.00 0.00 3.16
320 321 1.000843 GGCCCACCTCAATTCAACAAC 59.999 52.381 0.00 0.00 0.00 3.32
322 323 0.541764 GGGCCCACCTCAATTCAACA 60.542 55.000 19.95 0.00 35.85 3.33
323 324 1.595093 CGGGCCCACCTCAATTCAAC 61.595 60.000 24.92 0.00 36.97 3.18
324 325 1.304052 CGGGCCCACCTCAATTCAA 60.304 57.895 24.92 0.00 36.97 2.69
325 326 2.354729 CGGGCCCACCTCAATTCA 59.645 61.111 24.92 0.00 36.97 2.57
326 327 3.140814 GCGGGCCCACCTCAATTC 61.141 66.667 24.92 0.00 36.97 2.17
327 328 4.759205 GGCGGGCCCACCTCAATT 62.759 66.667 22.54 0.00 36.97 2.32
337 338 3.249189 TCATATCAGGGGCGGGCC 61.249 66.667 13.01 13.01 0.00 5.80
338 339 2.177594 CTCTCATATCAGGGGCGGGC 62.178 65.000 0.00 0.00 0.00 6.13
339 340 0.542938 TCTCTCATATCAGGGGCGGG 60.543 60.000 0.00 0.00 0.00 6.13
342 343 3.845781 TGTTTCTCTCATATCAGGGGC 57.154 47.619 0.00 0.00 0.00 5.80
375 376 8.653338 GCGAGACAACTAACTTTGTATATGAAA 58.347 33.333 0.00 0.00 39.88 2.69
377 378 7.274904 GTGCGAGACAACTAACTTTGTATATGA 59.725 37.037 0.00 0.00 39.88 2.15
379 380 7.094631 TGTGCGAGACAACTAACTTTGTATAT 58.905 34.615 0.00 0.00 39.88 0.86
380 381 6.448852 TGTGCGAGACAACTAACTTTGTATA 58.551 36.000 0.00 0.00 39.88 1.47
382 383 4.684877 TGTGCGAGACAACTAACTTTGTA 58.315 39.130 0.00 0.00 39.88 2.41
383 384 3.527533 TGTGCGAGACAACTAACTTTGT 58.472 40.909 0.00 0.00 42.55 2.83
384 385 3.802139 TCTGTGCGAGACAACTAACTTTG 59.198 43.478 0.00 0.00 32.80 2.77
385 386 4.054780 TCTGTGCGAGACAACTAACTTT 57.945 40.909 0.00 0.00 32.80 2.66
386 387 3.728076 TCTGTGCGAGACAACTAACTT 57.272 42.857 0.00 0.00 32.80 2.66
387 388 3.508012 AGATCTGTGCGAGACAACTAACT 59.492 43.478 0.00 0.00 32.80 2.24
388 389 3.839293 AGATCTGTGCGAGACAACTAAC 58.161 45.455 0.00 0.00 32.80 2.34
390 391 5.638596 TTAAGATCTGTGCGAGACAACTA 57.361 39.130 0.00 0.00 32.80 2.24
392 393 4.434857 GCTTTAAGATCTGTGCGAGACAAC 60.435 45.833 0.00 0.00 32.80 3.32
393 394 3.679980 GCTTTAAGATCTGTGCGAGACAA 59.320 43.478 0.00 0.00 32.80 3.18
394 395 3.254060 GCTTTAAGATCTGTGCGAGACA 58.746 45.455 0.00 0.00 31.75 3.41
395 396 3.254060 TGCTTTAAGATCTGTGCGAGAC 58.746 45.455 0.00 0.00 31.75 3.36
396 397 3.592898 TGCTTTAAGATCTGTGCGAGA 57.407 42.857 0.00 0.00 34.25 4.04
398 399 6.538381 TCAATATTGCTTTAAGATCTGTGCGA 59.462 34.615 10.76 0.00 0.00 5.10
399 400 6.718388 TCAATATTGCTTTAAGATCTGTGCG 58.282 36.000 10.76 0.00 0.00 5.34
400 401 8.400947 TCTTCAATATTGCTTTAAGATCTGTGC 58.599 33.333 10.76 0.00 0.00 4.57
401 402 9.932699 CTCTTCAATATTGCTTTAAGATCTGTG 57.067 33.333 10.76 0.00 0.00 3.66
406 407 9.896645 TCTGACTCTTCAATATTGCTTTAAGAT 57.103 29.630 10.76 5.33 0.00 2.40
411 412 8.619546 GCTATTCTGACTCTTCAATATTGCTTT 58.380 33.333 10.76 0.00 0.00 3.51
412 413 7.772292 TGCTATTCTGACTCTTCAATATTGCTT 59.228 33.333 10.76 0.00 31.01 3.91
414 415 7.488187 TGCTATTCTGACTCTTCAATATTGC 57.512 36.000 10.76 0.00 30.67 3.56
415 416 8.557864 CCTTGCTATTCTGACTCTTCAATATTG 58.442 37.037 9.29 9.29 0.00 1.90
416 417 7.228308 GCCTTGCTATTCTGACTCTTCAATATT 59.772 37.037 0.00 0.00 0.00 1.28
417 418 6.709846 GCCTTGCTATTCTGACTCTTCAATAT 59.290 38.462 0.00 0.00 0.00 1.28
418 419 6.051717 GCCTTGCTATTCTGACTCTTCAATA 58.948 40.000 0.00 0.00 0.00 1.90
419 420 4.880696 GCCTTGCTATTCTGACTCTTCAAT 59.119 41.667 0.00 0.00 0.00 2.57
420 421 4.256920 GCCTTGCTATTCTGACTCTTCAA 58.743 43.478 0.00 0.00 0.00 2.69
421 422 3.369892 GGCCTTGCTATTCTGACTCTTCA 60.370 47.826 0.00 0.00 0.00 3.02
422 423 3.118445 AGGCCTTGCTATTCTGACTCTTC 60.118 47.826 0.00 0.00 0.00 2.87
425 426 2.559440 CAGGCCTTGCTATTCTGACTC 58.441 52.381 0.00 0.00 0.00 3.36
427 428 1.673168 CCAGGCCTTGCTATTCTGAC 58.327 55.000 0.00 0.00 0.00 3.51
429 430 0.257039 ACCCAGGCCTTGCTATTCTG 59.743 55.000 0.00 0.00 0.00 3.02
430 431 0.257039 CACCCAGGCCTTGCTATTCT 59.743 55.000 0.00 0.00 0.00 2.40
431 432 1.387295 GCACCCAGGCCTTGCTATTC 61.387 60.000 18.80 0.00 33.26 1.75
432 433 1.380380 GCACCCAGGCCTTGCTATT 60.380 57.895 18.80 0.00 33.26 1.73
433 434 2.153898 TTGCACCCAGGCCTTGCTAT 62.154 55.000 24.62 0.00 37.16 2.97
434 435 2.769652 CTTGCACCCAGGCCTTGCTA 62.770 60.000 24.62 17.87 37.16 3.49
435 436 4.223125 TTGCACCCAGGCCTTGCT 62.223 61.111 24.62 0.00 37.16 3.91
436 437 3.688159 CTTGCACCCAGGCCTTGC 61.688 66.667 19.17 19.17 36.76 4.01
437 438 2.203538 ACTTGCACCCAGGCCTTG 60.204 61.111 0.00 0.00 0.00 3.61
438 439 2.203538 CACTTGCACCCAGGCCTT 60.204 61.111 0.00 0.00 0.00 4.35
439 440 4.982701 GCACTTGCACCCAGGCCT 62.983 66.667 0.00 0.00 41.59 5.19
440 441 4.982701 AGCACTTGCACCCAGGCC 62.983 66.667 3.62 0.00 45.16 5.19
441 442 2.469465 TAGAGCACTTGCACCCAGGC 62.469 60.000 3.62 0.00 45.16 4.85
442 443 0.036732 TTAGAGCACTTGCACCCAGG 59.963 55.000 3.62 0.00 45.16 4.45
443 444 1.896220 TTTAGAGCACTTGCACCCAG 58.104 50.000 3.62 0.00 45.16 4.45
444 445 2.356665 TTTTAGAGCACTTGCACCCA 57.643 45.000 3.62 0.00 45.16 4.51
445 446 3.507622 AGATTTTTAGAGCACTTGCACCC 59.492 43.478 3.62 0.00 45.16 4.61
446 447 4.479619 CAGATTTTTAGAGCACTTGCACC 58.520 43.478 3.62 0.00 45.16 5.01
447 448 3.916776 GCAGATTTTTAGAGCACTTGCAC 59.083 43.478 3.62 0.00 45.16 4.57
448 449 3.365264 CGCAGATTTTTAGAGCACTTGCA 60.365 43.478 3.62 0.00 45.16 4.08
449 450 3.166657 CGCAGATTTTTAGAGCACTTGC 58.833 45.455 0.00 0.00 42.49 4.01
450 451 4.398247 GACGCAGATTTTTAGAGCACTTG 58.602 43.478 0.00 0.00 0.00 3.16
451 452 3.437049 GGACGCAGATTTTTAGAGCACTT 59.563 43.478 0.00 0.00 0.00 3.16
452 453 3.003480 GGACGCAGATTTTTAGAGCACT 58.997 45.455 0.00 0.00 0.00 4.40
453 454 2.742053 TGGACGCAGATTTTTAGAGCAC 59.258 45.455 0.00 0.00 0.00 4.40
454 455 2.742053 GTGGACGCAGATTTTTAGAGCA 59.258 45.455 0.00 0.00 0.00 4.26
455 456 2.222819 CGTGGACGCAGATTTTTAGAGC 60.223 50.000 0.00 0.00 0.00 4.09
456 457 3.641439 CGTGGACGCAGATTTTTAGAG 57.359 47.619 0.00 0.00 0.00 2.43
469 470 0.241749 TACACTGTTAGGCGTGGACG 59.758 55.000 0.00 0.00 43.27 4.79
470 471 1.706443 GTACACTGTTAGGCGTGGAC 58.294 55.000 0.00 0.00 37.76 4.02
471 472 0.241749 CGTACACTGTTAGGCGTGGA 59.758 55.000 0.00 0.00 35.51 4.02
472 473 0.038892 ACGTACACTGTTAGGCGTGG 60.039 55.000 0.00 0.00 35.51 4.94
473 474 1.334054 GACGTACACTGTTAGGCGTG 58.666 55.000 0.00 0.00 37.18 5.34
474 475 0.242017 GGACGTACACTGTTAGGCGT 59.758 55.000 0.00 0.00 35.20 5.68
475 476 0.524862 AGGACGTACACTGTTAGGCG 59.475 55.000 0.00 0.00 0.00 5.52
476 477 1.542915 TCAGGACGTACACTGTTAGGC 59.457 52.381 0.00 0.00 36.17 3.93
477 478 2.163815 CCTCAGGACGTACACTGTTAGG 59.836 54.545 0.00 4.37 36.17 2.69
478 479 3.079578 TCCTCAGGACGTACACTGTTAG 58.920 50.000 0.00 0.00 36.17 2.34
479 480 3.144657 TCCTCAGGACGTACACTGTTA 57.855 47.619 0.00 0.00 36.17 2.41
480 481 1.991121 TCCTCAGGACGTACACTGTT 58.009 50.000 0.00 0.00 36.17 3.16
481 482 2.093106 GATCCTCAGGACGTACACTGT 58.907 52.381 0.00 0.00 32.98 3.55
482 483 1.064208 CGATCCTCAGGACGTACACTG 59.936 57.143 0.00 4.19 32.98 3.66
483 484 1.380524 CGATCCTCAGGACGTACACT 58.619 55.000 0.00 0.00 32.98 3.55
484 485 0.248539 GCGATCCTCAGGACGTACAC 60.249 60.000 14.64 0.00 32.98 2.90
485 486 0.678684 TGCGATCCTCAGGACGTACA 60.679 55.000 14.64 1.36 32.98 2.90
486 487 0.669077 ATGCGATCCTCAGGACGTAC 59.331 55.000 14.64 0.00 32.98 3.67
487 488 0.952280 GATGCGATCCTCAGGACGTA 59.048 55.000 14.64 11.66 32.98 3.57
488 489 1.736586 GATGCGATCCTCAGGACGT 59.263 57.895 14.64 0.00 32.98 4.34
489 490 1.006805 GGATGCGATCCTCAGGACG 60.007 63.158 0.00 3.12 46.19 4.79
498 499 3.748568 GGGAGAAAACATAGGATGCGATC 59.251 47.826 0.00 0.00 0.00 3.69
499 500 3.496870 GGGGAGAAAACATAGGATGCGAT 60.497 47.826 0.00 0.00 0.00 4.58
500 501 2.158813 GGGGAGAAAACATAGGATGCGA 60.159 50.000 0.00 0.00 0.00 5.10
501 502 2.158755 AGGGGAGAAAACATAGGATGCG 60.159 50.000 0.00 0.00 0.00 4.73
502 503 3.584733 AGGGGAGAAAACATAGGATGC 57.415 47.619 0.00 0.00 0.00 3.91
503 504 5.379706 AGAAGGGGAGAAAACATAGGATG 57.620 43.478 0.00 0.00 0.00 3.51
504 505 6.851836 TGATAGAAGGGGAGAAAACATAGGAT 59.148 38.462 0.00 0.00 0.00 3.24
505 506 6.209774 TGATAGAAGGGGAGAAAACATAGGA 58.790 40.000 0.00 0.00 0.00 2.94
506 507 6.500589 TGATAGAAGGGGAGAAAACATAGG 57.499 41.667 0.00 0.00 0.00 2.57
507 508 7.040823 GCATTGATAGAAGGGGAGAAAACATAG 60.041 40.741 0.00 0.00 0.00 2.23
508 509 6.772716 GCATTGATAGAAGGGGAGAAAACATA 59.227 38.462 0.00 0.00 0.00 2.29
509 510 5.595952 GCATTGATAGAAGGGGAGAAAACAT 59.404 40.000 0.00 0.00 0.00 2.71
510 511 4.949856 GCATTGATAGAAGGGGAGAAAACA 59.050 41.667 0.00 0.00 0.00 2.83
511 512 4.949856 TGCATTGATAGAAGGGGAGAAAAC 59.050 41.667 0.00 0.00 0.00 2.43
512 513 5.191727 TGCATTGATAGAAGGGGAGAAAA 57.808 39.130 0.00 0.00 0.00 2.29
513 514 4.860802 TGCATTGATAGAAGGGGAGAAA 57.139 40.909 0.00 0.00 0.00 2.52
514 515 4.860802 TTGCATTGATAGAAGGGGAGAA 57.139 40.909 0.00 0.00 0.00 2.87
515 516 4.474651 TCTTTGCATTGATAGAAGGGGAGA 59.525 41.667 0.00 0.00 0.00 3.71
516 517 4.785301 TCTTTGCATTGATAGAAGGGGAG 58.215 43.478 0.00 0.00 0.00 4.30
517 518 4.860802 TCTTTGCATTGATAGAAGGGGA 57.139 40.909 0.00 0.00 0.00 4.81
518 519 4.201950 CGTTCTTTGCATTGATAGAAGGGG 60.202 45.833 0.00 0.00 32.03 4.79
519 520 4.731773 GCGTTCTTTGCATTGATAGAAGGG 60.732 45.833 0.00 0.00 34.68 3.95
520 521 4.142622 TGCGTTCTTTGCATTGATAGAAGG 60.143 41.667 0.00 0.00 37.44 3.46
521 522 4.973396 TGCGTTCTTTGCATTGATAGAAG 58.027 39.130 0.00 0.00 37.44 2.85
549 550 3.269310 GCGTATCTTGTTTGCGAATACG 58.731 45.455 10.94 10.94 42.93 3.06
550 551 3.062909 TGGCGTATCTTGTTTGCGAATAC 59.937 43.478 0.00 0.00 0.00 1.89
551 552 3.062909 GTGGCGTATCTTGTTTGCGAATA 59.937 43.478 0.00 0.00 0.00 1.75
552 553 2.080693 TGGCGTATCTTGTTTGCGAAT 58.919 42.857 0.00 0.00 0.00 3.34
553 554 1.195900 GTGGCGTATCTTGTTTGCGAA 59.804 47.619 0.00 0.00 0.00 4.70
554 555 0.793861 GTGGCGTATCTTGTTTGCGA 59.206 50.000 0.00 0.00 0.00 5.10
555 556 0.179200 GGTGGCGTATCTTGTTTGCG 60.179 55.000 0.00 0.00 0.00 4.85
556 557 1.135689 CAGGTGGCGTATCTTGTTTGC 60.136 52.381 0.00 0.00 0.00 3.68
557 558 2.416547 CTCAGGTGGCGTATCTTGTTTG 59.583 50.000 0.00 0.00 0.00 2.93
558 559 2.038557 ACTCAGGTGGCGTATCTTGTTT 59.961 45.455 0.00 0.00 0.00 2.83
559 560 1.623811 ACTCAGGTGGCGTATCTTGTT 59.376 47.619 0.00 0.00 0.00 2.83
560 561 1.267121 ACTCAGGTGGCGTATCTTGT 58.733 50.000 0.00 0.00 0.00 3.16
561 562 3.520290 TTACTCAGGTGGCGTATCTTG 57.480 47.619 0.00 0.00 0.00 3.02
562 563 4.161565 TCAATTACTCAGGTGGCGTATCTT 59.838 41.667 0.00 0.00 0.00 2.40
563 564 3.704566 TCAATTACTCAGGTGGCGTATCT 59.295 43.478 0.00 0.00 0.00 1.98
564 565 4.054780 TCAATTACTCAGGTGGCGTATC 57.945 45.455 0.00 0.00 0.00 2.24
565 566 4.689612 ATCAATTACTCAGGTGGCGTAT 57.310 40.909 0.00 0.00 0.00 3.06
566 567 4.481368 AATCAATTACTCAGGTGGCGTA 57.519 40.909 0.00 0.00 0.00 4.42
567 568 3.350219 AATCAATTACTCAGGTGGCGT 57.650 42.857 0.00 0.00 0.00 5.68
568 569 4.438744 GGAAAATCAATTACTCAGGTGGCG 60.439 45.833 0.00 0.00 0.00 5.69
569 570 4.438744 CGGAAAATCAATTACTCAGGTGGC 60.439 45.833 0.00 0.00 0.00 5.01
570 571 4.700213 ACGGAAAATCAATTACTCAGGTGG 59.300 41.667 0.00 0.00 0.00 4.61
571 572 5.880054 ACGGAAAATCAATTACTCAGGTG 57.120 39.130 0.00 0.00 0.00 4.00
572 573 5.183140 CCAACGGAAAATCAATTACTCAGGT 59.817 40.000 0.00 0.00 0.00 4.00
573 574 5.414454 TCCAACGGAAAATCAATTACTCAGG 59.586 40.000 0.00 0.00 0.00 3.86
574 575 6.371548 TCTCCAACGGAAAATCAATTACTCAG 59.628 38.462 0.00 0.00 0.00 3.35
575 576 6.234920 TCTCCAACGGAAAATCAATTACTCA 58.765 36.000 0.00 0.00 0.00 3.41
576 577 6.737254 TCTCCAACGGAAAATCAATTACTC 57.263 37.500 0.00 0.00 0.00 2.59
577 578 7.703058 AATCTCCAACGGAAAATCAATTACT 57.297 32.000 0.00 0.00 0.00 2.24
578 579 8.647226 CAAAATCTCCAACGGAAAATCAATTAC 58.353 33.333 0.00 0.00 0.00 1.89
579 580 8.364142 ACAAAATCTCCAACGGAAAATCAATTA 58.636 29.630 0.00 0.00 0.00 1.40
580 581 7.216494 ACAAAATCTCCAACGGAAAATCAATT 58.784 30.769 0.00 0.00 0.00 2.32
581 582 6.758254 ACAAAATCTCCAACGGAAAATCAAT 58.242 32.000 0.00 0.00 0.00 2.57
582 583 6.155475 ACAAAATCTCCAACGGAAAATCAA 57.845 33.333 0.00 0.00 0.00 2.57
583 584 5.782893 ACAAAATCTCCAACGGAAAATCA 57.217 34.783 0.00 0.00 0.00 2.57
584 585 6.699642 TCAAACAAAATCTCCAACGGAAAATC 59.300 34.615 0.00 0.00 0.00 2.17
585 586 6.578023 TCAAACAAAATCTCCAACGGAAAAT 58.422 32.000 0.00 0.00 0.00 1.82
586 587 5.967088 TCAAACAAAATCTCCAACGGAAAA 58.033 33.333 0.00 0.00 0.00 2.29
587 588 5.451242 CCTCAAACAAAATCTCCAACGGAAA 60.451 40.000 0.00 0.00 0.00 3.13
588 589 4.037446 CCTCAAACAAAATCTCCAACGGAA 59.963 41.667 0.00 0.00 0.00 4.30
589 590 3.568007 CCTCAAACAAAATCTCCAACGGA 59.432 43.478 0.00 0.00 0.00 4.69
590 591 3.305335 CCCTCAAACAAAATCTCCAACGG 60.305 47.826 0.00 0.00 0.00 4.44
591 592 3.568007 TCCCTCAAACAAAATCTCCAACG 59.432 43.478 0.00 0.00 0.00 4.10
592 593 5.728637 ATCCCTCAAACAAAATCTCCAAC 57.271 39.130 0.00 0.00 0.00 3.77
593 594 8.434589 AAATATCCCTCAAACAAAATCTCCAA 57.565 30.769 0.00 0.00 0.00 3.53
594 595 7.124147 GGAAATATCCCTCAAACAAAATCTCCA 59.876 37.037 0.00 0.00 40.10 3.86
595 596 7.492524 GGAAATATCCCTCAAACAAAATCTCC 58.507 38.462 0.00 0.00 40.10 3.71
611 612 2.814336 GCATCTCCAACGGGAAATATCC 59.186 50.000 0.00 0.00 44.38 2.59
612 613 2.814336 GGCATCTCCAACGGGAAATATC 59.186 50.000 0.00 0.00 44.38 1.63
613 614 2.443255 AGGCATCTCCAACGGGAAATAT 59.557 45.455 0.00 0.00 44.38 1.28
614 615 1.843851 AGGCATCTCCAACGGGAAATA 59.156 47.619 0.00 0.00 44.38 1.40
615 616 0.625849 AGGCATCTCCAACGGGAAAT 59.374 50.000 0.00 0.00 44.38 2.17
616 617 0.404040 AAGGCATCTCCAACGGGAAA 59.596 50.000 0.00 0.00 44.38 3.13
617 618 1.065709 GTAAGGCATCTCCAACGGGAA 60.066 52.381 0.00 0.00 44.38 3.97
618 619 0.539986 GTAAGGCATCTCCAACGGGA 59.460 55.000 0.00 0.00 42.29 5.14
619 620 0.463833 GGTAAGGCATCTCCAACGGG 60.464 60.000 0.00 0.00 37.29 5.28
620 621 0.810031 CGGTAAGGCATCTCCAACGG 60.810 60.000 0.00 0.00 37.29 4.44
621 622 0.108329 ACGGTAAGGCATCTCCAACG 60.108 55.000 0.00 0.00 37.29 4.10
622 623 1.737793 CAACGGTAAGGCATCTCCAAC 59.262 52.381 0.00 0.00 37.29 3.77
623 624 1.339631 CCAACGGTAAGGCATCTCCAA 60.340 52.381 0.00 0.00 37.29 3.53
624 625 0.251916 CCAACGGTAAGGCATCTCCA 59.748 55.000 0.00 0.00 37.29 3.86
625 626 0.539986 TCCAACGGTAAGGCATCTCC 59.460 55.000 0.00 0.00 0.00 3.71
626 627 1.480954 TCTCCAACGGTAAGGCATCTC 59.519 52.381 0.00 0.00 0.00 2.75
627 628 1.568504 TCTCCAACGGTAAGGCATCT 58.431 50.000 0.00 0.00 0.00 2.90
628 629 2.213499 CATCTCCAACGGTAAGGCATC 58.787 52.381 0.00 0.00 0.00 3.91
629 630 1.559682 ACATCTCCAACGGTAAGGCAT 59.440 47.619 0.00 0.00 0.00 4.40
630 631 0.981183 ACATCTCCAACGGTAAGGCA 59.019 50.000 0.00 0.00 0.00 4.75
631 632 2.109425 AACATCTCCAACGGTAAGGC 57.891 50.000 0.00 0.00 0.00 4.35
656 658 1.106944 AACGGCAACCCCTCAACAAG 61.107 55.000 0.00 0.00 0.00 3.16
691 693 0.031994 GGTTTGTGTTTGCATCGGCT 59.968 50.000 0.00 0.00 41.91 5.52
782 795 1.883732 AGCGAGCGTGCTAGAGAAA 59.116 52.632 6.14 0.00 45.14 2.52
822 835 1.612676 GAAAGTACGCCCCTGGTTTT 58.387 50.000 0.00 0.00 0.00 2.43
832 845 2.274920 AAGAGTAGCCGAAAGTACGC 57.725 50.000 0.00 0.00 0.00 4.42
889 902 4.039730 ACTGTATAGCTAGGCCAACATGAG 59.960 45.833 5.01 0.00 0.00 2.90
919 933 3.553922 GCACCCGGAAAATGAACAATTCA 60.554 43.478 0.73 0.00 45.01 2.57
922 936 1.275010 GGCACCCGGAAAATGAACAAT 59.725 47.619 0.73 0.00 0.00 2.71
923 937 0.676736 GGCACCCGGAAAATGAACAA 59.323 50.000 0.73 0.00 0.00 2.83
924 938 0.468214 TGGCACCCGGAAAATGAACA 60.468 50.000 0.73 0.00 0.00 3.18
925 939 0.676736 TTGGCACCCGGAAAATGAAC 59.323 50.000 0.73 0.00 0.00 3.18
926 940 0.965439 CTTGGCACCCGGAAAATGAA 59.035 50.000 0.73 0.00 0.00 2.57
992 1009 5.300752 AGAATGAACATACCATGATCGTCC 58.699 41.667 0.00 0.00 35.11 4.79
1026 1044 8.379457 ACTTCATGTACTGTAAAAAGAACTCC 57.621 34.615 0.00 0.00 0.00 3.85
1037 1055 6.210784 AGCCTAAACTGACTTCATGTACTGTA 59.789 38.462 0.00 0.00 0.00 2.74
1039 1057 5.482908 AGCCTAAACTGACTTCATGTACTG 58.517 41.667 0.00 0.00 0.00 2.74
1040 1058 5.482175 AGAGCCTAAACTGACTTCATGTACT 59.518 40.000 0.00 0.00 0.00 2.73
1042 1060 6.014584 TGAAGAGCCTAAACTGACTTCATGTA 60.015 38.462 0.00 0.00 38.73 2.29
1043 1061 4.899352 AGAGCCTAAACTGACTTCATGT 57.101 40.909 0.00 0.00 0.00 3.21
1047 1065 6.809630 AAATGAAGAGCCTAAACTGACTTC 57.190 37.500 0.00 0.00 35.70 3.01
1058 1076 4.410099 TGGATCACAAAAATGAAGAGCCT 58.590 39.130 0.00 0.00 30.82 4.58
1062 1080 4.558496 GCGGTTGGATCACAAAAATGAAGA 60.558 41.667 0.00 0.00 41.58 2.87
1084 1102 6.982852 TGCTATACTGTTGTCTAATCTAGGC 58.017 40.000 0.00 0.00 0.00 3.93
1099 1117 7.136119 GCTAGTACAAGAACTCTGCTATACTG 58.864 42.308 0.00 0.00 0.00 2.74
1111 1129 9.727627 AAATATACTACGTGCTAGTACAAGAAC 57.272 33.333 11.70 0.00 40.18 3.01
1120 1138 8.856814 CGTACAGTAAATATACTACGTGCTAG 57.143 38.462 0.00 0.00 40.44 3.42
1158 1347 6.428159 GTGCTCTCTGTTCCTGAAAAAGATTA 59.572 38.462 0.00 0.00 0.00 1.75
1160 1349 4.759183 GTGCTCTCTGTTCCTGAAAAAGAT 59.241 41.667 0.00 0.00 0.00 2.40
1163 1352 2.872245 CGTGCTCTCTGTTCCTGAAAAA 59.128 45.455 0.00 0.00 0.00 1.94
1183 1372 1.528586 CCAAGAACAAGACACTGCTCG 59.471 52.381 0.00 0.00 0.00 5.03
1192 1381 2.173782 TGTAGGTTGCCCAAGAACAAGA 59.826 45.455 0.00 0.00 0.00 3.02
1214 1403 1.595929 TTCCGAACACTCCGTTGCC 60.596 57.895 0.00 0.00 38.19 4.52
1226 1415 0.249996 GGGACGTTTCCTGTTCCGAA 60.250 55.000 0.00 0.00 42.38 4.30
1251 1443 1.333524 GCAGATTCGTTGGCATCGATG 60.334 52.381 21.27 21.27 37.18 3.84
1272 1464 1.812922 GGGATGTGACTCTGCTGCG 60.813 63.158 0.00 0.00 0.00 5.18
1539 1779 2.044252 TCCGTCCTCTCTTCCGGG 60.044 66.667 0.00 0.00 40.78 5.73
1635 1875 4.065281 GTGACCGACCCGTCCCAG 62.065 72.222 0.00 0.00 31.35 4.45
1668 1908 0.934496 CGAACGCCACTTTGAACTCA 59.066 50.000 0.00 0.00 0.00 3.41
1815 2063 0.028902 CAGCATCCATGATGTGTGCG 59.971 55.000 11.78 5.62 41.60 5.34
1872 2120 3.305361 CAGTGATCAGCATTGTAGTCGTG 59.695 47.826 0.00 0.00 30.30 4.35
1902 2150 5.813157 GTCTGAAATTACCTGTAGGAGAAGC 59.187 44.000 4.64 0.00 38.94 3.86
1927 2175 8.871686 AGCATTTTGGTTACTGTAAAAAGAAG 57.128 30.769 1.10 0.00 0.00 2.85
1930 2178 8.352942 AGAGAGCATTTTGGTTACTGTAAAAAG 58.647 33.333 1.10 0.00 0.00 2.27
1934 2182 6.769512 AGAGAGAGCATTTTGGTTACTGTAA 58.230 36.000 0.00 0.00 0.00 2.41
1935 2183 6.211584 AGAGAGAGAGCATTTTGGTTACTGTA 59.788 38.462 0.00 0.00 0.00 2.74
1976 2224 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1977 2225 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1978 2226 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1979 2227 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1980 2228 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1981 2229 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1982 2230 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1983 2231 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1984 2232 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1985 2233 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1986 2234 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1987 2235 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1988 2236 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1989 2237 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1990 2238 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1991 2239 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1992 2240 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1993 2241 5.830457 TGTAGAGAGAGAGAGAGAGAGAGAG 59.170 48.000 0.00 0.00 0.00 3.20
1994 2242 5.766590 TGTAGAGAGAGAGAGAGAGAGAGA 58.233 45.833 0.00 0.00 0.00 3.10
1995 2243 6.266330 TCATGTAGAGAGAGAGAGAGAGAGAG 59.734 46.154 0.00 0.00 0.00 3.20
1996 2244 6.136155 TCATGTAGAGAGAGAGAGAGAGAGA 58.864 44.000 0.00 0.00 0.00 3.10
1997 2245 6.410942 TCATGTAGAGAGAGAGAGAGAGAG 57.589 45.833 0.00 0.00 0.00 3.20
2046 2296 6.506147 ACAAGTCGTACAACTGTATGTGTTA 58.494 36.000 8.55 0.00 38.37 2.41
2048 2298 4.940463 ACAAGTCGTACAACTGTATGTGT 58.060 39.130 8.55 4.21 38.37 3.72
2099 2349 3.518303 AGTATTTGACACTAGGGGACACC 59.482 47.826 0.00 0.00 40.67 4.16
2109 2359 3.189910 TCGCTGTCGTAGTATTTGACACT 59.810 43.478 0.00 0.00 37.69 3.55
2117 2367 2.608546 GAGTGTCTCGCTGTCGTAGTAT 59.391 50.000 0.00 0.00 36.96 2.12
2118 2368 1.998315 GAGTGTCTCGCTGTCGTAGTA 59.002 52.381 0.00 0.00 36.96 1.82
2162 2412 2.446435 GCTGAAATCTTGGGTGGCTTA 58.554 47.619 0.00 0.00 0.00 3.09
2164 2414 0.962356 CGCTGAAATCTTGGGTGGCT 60.962 55.000 0.00 0.00 0.00 4.75
2167 2417 0.597568 TTGCGCTGAAATCTTGGGTG 59.402 50.000 9.73 0.00 0.00 4.61
2180 2430 4.496336 GATGGCTCCCCTTGCGCT 62.496 66.667 9.73 0.00 0.00 5.92
2183 2433 1.454663 GAAGGATGGCTCCCCTTGC 60.455 63.158 9.65 0.00 42.43 4.01
2202 2452 2.081462 GGTACTTACGCCACATGCTTT 58.919 47.619 0.00 0.00 38.05 3.51
2203 2453 1.278127 AGGTACTTACGCCACATGCTT 59.722 47.619 0.00 0.00 32.73 3.91
2311 2561 0.681733 CCCTGGATCCGTAGTCATGG 59.318 60.000 7.39 0.00 0.00 3.66
2318 2568 1.202099 TTGGTTGCCCTGGATCCGTA 61.202 55.000 7.39 0.00 0.00 4.02
2320 2570 1.750399 CTTGGTTGCCCTGGATCCG 60.750 63.158 7.39 1.76 0.00 4.18
2330 2580 0.458669 CATGGGATGAGCTTGGTTGC 59.541 55.000 0.00 0.00 0.00 4.17
2376 2626 1.350310 ACTTGGACGTGAGGGGGTTT 61.350 55.000 0.00 0.00 0.00 3.27
2379 2629 0.036671 GTTACTTGGACGTGAGGGGG 60.037 60.000 0.00 0.00 0.00 5.40
2384 2634 5.120399 ACTTGATTTGTTACTTGGACGTGA 58.880 37.500 0.00 0.00 0.00 4.35
2386 2636 4.514066 GGACTTGATTTGTTACTTGGACGT 59.486 41.667 0.00 0.00 0.00 4.34
2387 2637 4.083484 GGGACTTGATTTGTTACTTGGACG 60.083 45.833 0.00 0.00 0.00 4.79
2447 2697 4.870991 GGGTATCTCTCCTTCAAAAACTCG 59.129 45.833 0.00 0.00 0.00 4.18
2449 2699 4.323562 CCGGGTATCTCTCCTTCAAAAACT 60.324 45.833 0.00 0.00 0.00 2.66
2450 2700 3.939592 CCGGGTATCTCTCCTTCAAAAAC 59.060 47.826 0.00 0.00 0.00 2.43
2459 2709 0.465097 TCACGTCCGGGTATCTCTCC 60.465 60.000 0.00 0.00 0.00 3.71
2475 2725 5.463724 GGTCTACCAATTCAGAATCGATCAC 59.536 44.000 0.00 0.00 35.64 3.06
2528 2778 4.070009 TCTTGAATATGCTAGCATGCAGG 58.930 43.478 35.20 27.42 46.71 4.85
2534 2784 5.357742 TGGAGTTCTTGAATATGCTAGCA 57.642 39.130 21.85 21.85 0.00 3.49
2535 2785 5.994054 TGATGGAGTTCTTGAATATGCTAGC 59.006 40.000 8.10 8.10 0.00 3.42
2600 2850 3.177920 CGCTGTCTCTGCGTCTGC 61.178 66.667 11.60 0.00 44.43 4.26
2688 2938 1.001406 CCTGGCTCGTTTCTTCTCTGT 59.999 52.381 0.00 0.00 0.00 3.41
2696 2946 1.026718 CATGGGTCCTGGCTCGTTTC 61.027 60.000 0.00 0.00 0.00 2.78
2720 2970 1.236628 GAGCAATATCTGGCCAGCTG 58.763 55.000 28.91 20.90 31.61 4.24
2724 2974 1.820483 GCATGGAGCAATATCTGGCCA 60.820 52.381 4.71 4.71 44.79 5.36
2725 2975 0.886563 GCATGGAGCAATATCTGGCC 59.113 55.000 0.00 0.00 44.79 5.36
2845 3128 4.898265 TCCATTCACACATTTTCTTTCCCA 59.102 37.500 0.00 0.00 0.00 4.37
2882 3165 2.754552 CCAAATCTTCGGCATGGAGAAA 59.245 45.455 0.00 0.00 32.82 2.52
3026 3327 4.012374 CCCTGCTTAATTCTTGCTGAAGA 58.988 43.478 0.00 0.00 38.18 2.87
3051 3352 5.694995 TCAACTCCCTCAAAGACTCATTTT 58.305 37.500 0.00 0.00 0.00 1.82
3170 3472 8.166422 AGATTAACCAATTCCGATTAACATCC 57.834 34.615 0.00 0.00 0.00 3.51
3213 3515 5.967088 ACAGTAAAGTGGCATGACTACTAG 58.033 41.667 0.00 0.00 39.56 2.57
3327 3631 8.413229 CAATCTTGTAAGGAAAGTTTCAGGAAA 58.587 33.333 17.16 4.37 0.00 3.13
3458 6347 5.130292 TGTTTCGGAAGGTCTAACTAGTG 57.870 43.478 0.00 0.00 0.00 2.74
3463 6352 4.629092 AGAACTGTTTCGGAAGGTCTAAC 58.371 43.478 0.00 0.00 38.71 2.34
3504 6462 1.132817 TCCCCAGGCTACCCTTCTATC 60.133 57.143 0.00 0.00 40.33 2.08
3516 6474 2.290960 ACATAACAAAGACTCCCCAGGC 60.291 50.000 0.00 0.00 0.00 4.85
3517 6475 3.721087 ACATAACAAAGACTCCCCAGG 57.279 47.619 0.00 0.00 0.00 4.45
3518 6476 4.384208 CCCTACATAACAAAGACTCCCCAG 60.384 50.000 0.00 0.00 0.00 4.45
3521 6479 5.632034 ATCCCTACATAACAAAGACTCCC 57.368 43.478 0.00 0.00 0.00 4.30
3525 6483 6.583562 AGCACTATCCCTACATAACAAAGAC 58.416 40.000 0.00 0.00 0.00 3.01
3530 6488 5.542635 CCCTAAGCACTATCCCTACATAACA 59.457 44.000 0.00 0.00 0.00 2.41
3531 6490 5.569026 GCCCTAAGCACTATCCCTACATAAC 60.569 48.000 0.00 0.00 42.97 1.89
3534 6493 2.907042 GCCCTAAGCACTATCCCTACAT 59.093 50.000 0.00 0.00 42.97 2.29
3590 6549 7.616935 TGCTAACTAAGTAGTAACCACTGGTAT 59.383 37.037 0.00 0.00 32.28 2.73
3593 6552 6.276832 TGCTAACTAAGTAGTAACCACTGG 57.723 41.667 0.00 0.00 34.99 4.00
3595 6554 8.130671 TCATTGCTAACTAAGTAGTAACCACT 57.869 34.615 0.00 0.00 34.99 4.00
3605 6564 9.454859 AAAGAGCTATTTCATTGCTAACTAAGT 57.545 29.630 0.00 0.00 41.30 2.24
3606 6565 9.713740 CAAAGAGCTATTTCATTGCTAACTAAG 57.286 33.333 2.67 0.00 41.30 2.18
3611 6570 8.743085 AGATCAAAGAGCTATTTCATTGCTAA 57.257 30.769 2.67 0.00 41.30 3.09
3612 6571 9.486497 CTAGATCAAAGAGCTATTTCATTGCTA 57.514 33.333 2.67 0.00 41.30 3.49
3613 6572 7.444792 CCTAGATCAAAGAGCTATTTCATTGCT 59.555 37.037 2.67 0.00 43.83 3.91
3614 6573 7.228308 ACCTAGATCAAAGAGCTATTTCATTGC 59.772 37.037 2.67 0.00 30.02 3.56
3615 6574 8.674263 ACCTAGATCAAAGAGCTATTTCATTG 57.326 34.615 2.67 0.00 30.02 2.82
3616 6575 9.336171 GAACCTAGATCAAAGAGCTATTTCATT 57.664 33.333 2.67 0.00 30.02 2.57
3619 6578 8.825745 CAAGAACCTAGATCAAAGAGCTATTTC 58.174 37.037 2.67 0.00 30.02 2.17
3622 6581 7.430760 ACAAGAACCTAGATCAAAGAGCTAT 57.569 36.000 0.00 0.00 30.02 2.97
3660 6619 6.454318 GCACGATCTTACTACATTCACAACAG 60.454 42.308 0.00 0.00 0.00 3.16
3663 6622 4.868171 GGCACGATCTTACTACATTCACAA 59.132 41.667 0.00 0.00 0.00 3.33
3687 6654 3.430218 GTCTCGCCTATGCATCACAATAC 59.570 47.826 0.19 0.00 37.32 1.89
3688 6655 3.069443 TGTCTCGCCTATGCATCACAATA 59.931 43.478 0.19 0.00 37.32 1.90
3703 6670 2.715737 AGACTCAGAAAGTGTCTCGC 57.284 50.000 0.00 0.00 45.32 5.03
3714 6681 5.221461 GGGTTGTTTCTGTAGAAGACTCAGA 60.221 44.000 0.00 0.00 33.46 3.27
3718 6714 5.163195 ACATGGGTTGTTTCTGTAGAAGACT 60.163 40.000 0.00 0.00 33.74 3.24
3720 6716 5.304686 ACATGGGTTGTTTCTGTAGAAGA 57.695 39.130 0.00 0.00 33.74 2.87
3723 6719 6.182507 AGTAACATGGGTTGTTTCTGTAGA 57.817 37.500 0.00 0.00 46.51 2.59
3728 6724 9.396022 CTCATAATAGTAACATGGGTTGTTTCT 57.604 33.333 0.00 0.17 46.51 2.52
3737 6733 7.792374 ACAGTTGCTCATAATAGTAACATGG 57.208 36.000 0.00 0.61 42.49 3.66
3738 6734 9.534565 AGTACAGTTGCTCATAATAGTAACATG 57.465 33.333 7.42 0.00 42.49 3.21
3740 6736 9.366216 CAAGTACAGTTGCTCATAATAGTAACA 57.634 33.333 7.42 0.00 42.49 2.41
3743 6739 8.074613 ACCAAGTACAGTTGCTCATAATAGTA 57.925 34.615 0.00 0.00 0.00 1.82
3744 6740 6.947464 ACCAAGTACAGTTGCTCATAATAGT 58.053 36.000 0.00 0.00 0.00 2.12
3745 6741 8.414003 TCTACCAAGTACAGTTGCTCATAATAG 58.586 37.037 0.00 0.00 0.00 1.73
3746 6742 8.301252 TCTACCAAGTACAGTTGCTCATAATA 57.699 34.615 0.00 0.00 0.00 0.98
3747 6743 7.182817 TCTACCAAGTACAGTTGCTCATAAT 57.817 36.000 0.00 0.00 0.00 1.28
3749 6745 6.599356 TTCTACCAAGTACAGTTGCTCATA 57.401 37.500 0.00 0.00 0.00 2.15
3750 6746 5.483685 TTCTACCAAGTACAGTTGCTCAT 57.516 39.130 0.00 0.00 0.00 2.90
3751 6747 4.948341 TTCTACCAAGTACAGTTGCTCA 57.052 40.909 0.00 0.00 0.00 4.26
3752 6748 7.603024 AGTTTATTCTACCAAGTACAGTTGCTC 59.397 37.037 0.00 0.00 0.00 4.26
3765 6964 8.673711 GTTATGCATTGACAGTTTATTCTACCA 58.326 33.333 3.54 0.00 0.00 3.25
3766 6965 8.893727 AGTTATGCATTGACAGTTTATTCTACC 58.106 33.333 3.54 0.00 0.00 3.18
3770 6969 7.761409 TCCAGTTATGCATTGACAGTTTATTC 58.239 34.615 3.54 0.00 0.00 1.75
3781 6980 6.150976 TGTCTTAACCTTCCAGTTATGCATTG 59.849 38.462 3.54 0.00 32.45 2.82
3784 6983 5.235850 TGTCTTAACCTTCCAGTTATGCA 57.764 39.130 0.00 0.00 32.45 3.96
3793 6992 6.203808 ACAAGTGTTTTGTCTTAACCTTCC 57.796 37.500 0.00 0.00 0.00 3.46
3803 7015 8.021396 ACTTCTGAAACTTACAAGTGTTTTGTC 58.979 33.333 0.00 0.00 39.66 3.18
3804 7016 7.882179 ACTTCTGAAACTTACAAGTGTTTTGT 58.118 30.769 0.00 0.00 39.66 2.83
3805 7017 8.638565 CAACTTCTGAAACTTACAAGTGTTTTG 58.361 33.333 0.00 0.00 39.66 2.44
3808 7020 6.072175 TGCAACTTCTGAAACTTACAAGTGTT 60.072 34.615 0.00 0.00 39.66 3.32
3809 7021 5.414454 TGCAACTTCTGAAACTTACAAGTGT 59.586 36.000 0.00 0.00 39.66 3.55
3819 7031 2.035066 AGCCATGTGCAACTTCTGAAAC 59.965 45.455 8.58 0.00 44.83 2.78
3828 7040 4.804108 TGTAAATTACAGCCATGTGCAAC 58.196 39.130 1.08 0.00 44.83 4.17
3879 7091 9.712305 CGGGAAGATGATTAGTTAGATGTAATT 57.288 33.333 0.00 0.00 0.00 1.40
3880 7092 9.090103 TCGGGAAGATGATTAGTTAGATGTAAT 57.910 33.333 0.00 0.00 0.00 1.89
3881 7093 8.358148 GTCGGGAAGATGATTAGTTAGATGTAA 58.642 37.037 0.00 0.00 0.00 2.41
3882 7094 7.308408 CGTCGGGAAGATGATTAGTTAGATGTA 60.308 40.741 0.00 0.00 38.11 2.29
3883 7095 6.515200 CGTCGGGAAGATGATTAGTTAGATGT 60.515 42.308 0.00 0.00 38.11 3.06
3884 7096 5.859114 CGTCGGGAAGATGATTAGTTAGATG 59.141 44.000 0.00 0.00 38.11 2.90
3896 7108 0.738975 TGTAGCTCGTCGGGAAGATG 59.261 55.000 0.00 0.00 37.22 2.90
3897 7109 1.025812 CTGTAGCTCGTCGGGAAGAT 58.974 55.000 0.00 0.00 0.00 2.40
3899 7111 1.226717 GCTGTAGCTCGTCGGGAAG 60.227 63.158 0.00 0.00 38.21 3.46
3900 7112 2.882876 GCTGTAGCTCGTCGGGAA 59.117 61.111 0.00 0.00 38.21 3.97
3916 7128 9.533253 AATATGCCAAATTAAATCACAAGTAGC 57.467 29.630 0.00 0.00 0.00 3.58
3969 7181 1.873591 GTGCGACATCTGAAACTTGGT 59.126 47.619 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.