Multiple sequence alignment - TraesCS7A01G190000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G190000 chr7A 100.000 3813 0 0 1 3813 147909635 147913447 0.000000e+00 7042.0
1 TraesCS7A01G190000 chr7A 97.046 237 5 1 3542 3778 147920462 147920228 7.670000e-107 398.0
2 TraesCS7A01G190000 chr7A 93.377 151 6 2 3391 3541 69160974 69160828 1.780000e-53 220.0
3 TraesCS7A01G190000 chr7A 92.667 150 6 3 3393 3541 267056115 267055970 1.070000e-50 211.0
4 TraesCS7A01G190000 chr7A 89.873 79 6 1 3159 3235 710477591 710477513 2.420000e-17 100.0
5 TraesCS7A01G190000 chr7B 87.553 2362 136 40 1 2293 109032746 109035018 0.000000e+00 2588.0
6 TraesCS7A01G190000 chr7B 92.665 927 59 6 2368 3290 109035040 109035961 0.000000e+00 1327.0
7 TraesCS7A01G190000 chr7D 90.447 1654 108 29 665 2293 146621803 146623431 0.000000e+00 2134.0
8 TraesCS7A01G190000 chr7D 93.628 769 39 5 2627 3392 146623895 146624656 0.000000e+00 1140.0
9 TraesCS7A01G190000 chr7D 89.483 580 28 8 1 579 146621206 146621753 0.000000e+00 702.0
10 TraesCS7A01G190000 chr7D 94.788 307 16 0 2323 2629 146623429 146623735 2.660000e-131 479.0
11 TraesCS7A01G190000 chr2A 94.142 239 14 0 3542 3780 769243464 769243226 7.780000e-97 364.0
12 TraesCS7A01G190000 chr2A 93.724 239 15 0 3542 3780 115136887 115136649 3.620000e-95 359.0
13 TraesCS7A01G190000 chr1B 93.724 239 15 0 3542 3780 94929387 94929625 3.620000e-95 359.0
14 TraesCS7A01G190000 chr1B 92.917 240 17 0 3541 3780 544793223 544793462 2.180000e-92 350.0
15 TraesCS7A01G190000 chr1B 89.000 200 17 4 3158 3354 588256673 588256870 3.810000e-60 243.0
16 TraesCS7A01G190000 chr1B 89.894 188 15 3 3169 3354 409305247 409305062 4.920000e-59 239.0
17 TraesCS7A01G190000 chr6A 93.305 239 16 0 3542 3780 162661645 162661407 1.690000e-93 353.0
18 TraesCS7A01G190000 chr6A 92.105 152 7 3 3391 3541 564852441 564852294 3.860000e-50 209.0
19 TraesCS7A01G190000 chr6B 92.593 243 18 0 3538 3780 661545811 661545569 2.180000e-92 350.0
20 TraesCS7A01G190000 chr6B 89.500 200 16 4 3158 3354 718251880 718251683 8.180000e-62 248.0
21 TraesCS7A01G190000 chr6B 92.000 150 8 2 3393 3541 402580109 402579963 1.390000e-49 207.0
22 TraesCS7A01G190000 chr3A 92.887 239 16 1 3542 3780 636526818 636527055 2.820000e-91 346.0
23 TraesCS7A01G190000 chr3A 92.715 151 7 2 3389 3538 489168112 489168259 8.300000e-52 215.0
24 TraesCS7A01G190000 chr3D 92.469 239 18 0 3542 3780 160924186 160923948 3.650000e-90 342.0
25 TraesCS7A01G190000 chr1D 90.526 190 12 4 3169 3354 494019187 494019374 2.940000e-61 246.0
26 TraesCS7A01G190000 chr1A 92.763 152 7 2 3391 3541 440024502 440024354 2.310000e-52 217.0
27 TraesCS7A01G190000 chr5A 92.157 153 7 3 3391 3541 362164103 362164252 1.070000e-50 211.0
28 TraesCS7A01G190000 chr4A 93.151 146 7 1 3393 3538 478196765 478196907 1.070000e-50 211.0
29 TraesCS7A01G190000 chr5B 92.053 151 8 2 3391 3541 205976870 205977016 3.860000e-50 209.0
30 TraesCS7A01G190000 chr5B 82.584 178 21 2 953 1123 163083416 163083242 8.530000e-32 148.0
31 TraesCS7A01G190000 chr5B 89.524 105 6 3 3157 3256 50498452 50498556 1.110000e-25 128.0
32 TraesCS7A01G190000 chr2B 100.000 29 0 0 596 624 406098354 406098382 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G190000 chr7A 147909635 147913447 3812 False 7042.00 7042 100.0000 1 3813 1 chr7A.!!$F1 3812
1 TraesCS7A01G190000 chr7B 109032746 109035961 3215 False 1957.50 2588 90.1090 1 3290 2 chr7B.!!$F1 3289
2 TraesCS7A01G190000 chr7D 146621206 146624656 3450 False 1113.75 2134 92.0865 1 3392 4 chr7D.!!$F1 3391

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
930 944 2.159071 TCGACGACCAAAAACAGAGGAA 60.159 45.455 0.00 0.0 0.00 3.36 F
1878 1941 0.106335 AATGATCAGAGAGCAGGGCG 59.894 55.000 0.09 0.0 29.44 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1912 1975 0.036010 CACTACAGGACCCAGGCAAG 60.036 60.0 0.00 0.0 0.00 4.01 R
3400 3648 0.035598 TGGGTGAATCGCCGAAAAGA 59.964 50.0 6.77 0.0 34.37 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
193 196 7.906611 TCAAATACATTTCACAAGTTTCACG 57.093 32.000 0.00 0.00 0.00 4.35
194 197 7.698628 TCAAATACATTTCACAAGTTTCACGA 58.301 30.769 0.00 0.00 0.00 4.35
195 198 8.184848 TCAAATACATTTCACAAGTTTCACGAA 58.815 29.630 0.00 0.00 0.00 3.85
196 199 8.967218 CAAATACATTTCACAAGTTTCACGAAT 58.033 29.630 0.00 0.00 0.00 3.34
197 200 9.528018 AAATACATTTCACAAGTTTCACGAATT 57.472 25.926 0.00 0.00 0.00 2.17
198 201 8.728088 ATACATTTCACAAGTTTCACGAATTC 57.272 30.769 0.00 0.00 0.00 2.17
199 202 6.559810 ACATTTCACAAGTTTCACGAATTCA 58.440 32.000 6.22 0.00 0.00 2.57
200 203 6.472163 ACATTTCACAAGTTTCACGAATTCAC 59.528 34.615 6.22 0.00 0.00 3.18
201 204 5.553290 TTCACAAGTTTCACGAATTCACA 57.447 34.783 6.22 0.00 0.00 3.58
202 205 5.553290 TCACAAGTTTCACGAATTCACAA 57.447 34.783 6.22 0.00 0.00 3.33
203 206 5.568482 TCACAAGTTTCACGAATTCACAAG 58.432 37.500 6.22 0.00 0.00 3.16
204 207 5.123186 TCACAAGTTTCACGAATTCACAAGT 59.877 36.000 6.22 0.00 0.00 3.16
365 369 5.514500 AGGTTTGGCCAAGTTTAGAGATA 57.486 39.130 19.48 0.00 40.61 1.98
445 449 4.070630 ACCCAATGGTGTGAATTTTGTG 57.929 40.909 0.00 0.00 45.58 3.33
499 503 8.947055 ACTTGATCAAAATTTGTAAAGCTTGT 57.053 26.923 9.88 0.00 0.00 3.16
500 504 9.382275 ACTTGATCAAAATTTGTAAAGCTTGTT 57.618 25.926 9.88 0.00 0.00 2.83
549 553 4.098349 GCACTGCATTATGAAAATGGAGGA 59.902 41.667 19.14 0.00 46.26 3.71
617 621 8.561738 ACCAACACTTTTATATTACAGGACAG 57.438 34.615 0.00 0.00 0.00 3.51
618 622 8.380099 ACCAACACTTTTATATTACAGGACAGA 58.620 33.333 0.00 0.00 0.00 3.41
619 623 8.883731 CCAACACTTTTATATTACAGGACAGAG 58.116 37.037 0.00 0.00 0.00 3.35
620 624 8.883731 CAACACTTTTATATTACAGGACAGAGG 58.116 37.037 0.00 0.00 0.00 3.69
621 625 7.565680 ACACTTTTATATTACAGGACAGAGGG 58.434 38.462 0.00 0.00 0.00 4.30
622 626 7.402071 ACACTTTTATATTACAGGACAGAGGGA 59.598 37.037 0.00 0.00 0.00 4.20
623 627 7.928706 CACTTTTATATTACAGGACAGAGGGAG 59.071 40.741 0.00 0.00 0.00 4.30
624 628 6.996180 TTTATATTACAGGACAGAGGGAGG 57.004 41.667 0.00 0.00 0.00 4.30
625 629 2.182516 ATTACAGGACAGAGGGAGGG 57.817 55.000 0.00 0.00 0.00 4.30
658 662 6.860023 GGCACTGAAATGTTTGAGATATATGC 59.140 38.462 0.00 0.00 0.00 3.14
661 665 9.661187 CACTGAAATGTTTGAGATATATGCTTC 57.339 33.333 0.00 0.00 0.00 3.86
663 667 7.864686 TGAAATGTTTGAGATATATGCTTCGG 58.135 34.615 0.00 0.00 0.00 4.30
719 724 8.776680 TGCGAAATACTAAAAGAAAGTGAAAC 57.223 30.769 0.00 0.00 0.00 2.78
809 817 3.126001 TCCATTCCAACTCACAGTCAC 57.874 47.619 0.00 0.00 0.00 3.67
930 944 2.159071 TCGACGACCAAAAACAGAGGAA 60.159 45.455 0.00 0.00 0.00 3.36
931 945 2.221055 CGACGACCAAAAACAGAGGAAG 59.779 50.000 0.00 0.00 0.00 3.46
932 946 3.463944 GACGACCAAAAACAGAGGAAGA 58.536 45.455 0.00 0.00 0.00 2.87
1244 1286 6.016718 CCAATTTCAACTGCGCATTTAATTG 58.983 36.000 26.18 26.18 33.67 2.32
1253 1295 5.516339 ACTGCGCATTTAATTGTATGCTTTC 59.484 36.000 12.24 11.22 43.79 2.62
1256 1298 7.254137 TGCGCATTTAATTGTATGCTTTCTAA 58.746 30.769 5.66 2.58 43.79 2.10
1305 1347 0.887836 TGCACGGTGTCGAGACTACT 60.888 55.000 12.92 0.00 40.11 2.57
1332 1374 6.524586 CGCCATTTTCTTGTTTCTGTATCTTC 59.475 38.462 0.00 0.00 0.00 2.87
1342 1384 7.348080 TGTTTCTGTATCTTCGGATCATACT 57.652 36.000 0.00 0.00 36.01 2.12
1344 1386 5.378292 TCTGTATCTTCGGATCATACTGC 57.622 43.478 0.00 0.00 36.01 4.40
1345 1387 4.218635 TCTGTATCTTCGGATCATACTGCC 59.781 45.833 0.00 0.00 36.01 4.85
1346 1388 3.895041 TGTATCTTCGGATCATACTGCCA 59.105 43.478 0.00 0.00 36.01 4.92
1354 1396 3.744942 CGGATCATACTGCCATTCAGAAG 59.255 47.826 0.00 0.00 45.72 2.85
1358 1400 4.774124 TCATACTGCCATTCAGAAGAAGG 58.226 43.478 0.00 0.00 45.72 3.46
1367 1409 6.493115 TGCCATTCAGAAGAAGGAAAAATGTA 59.507 34.615 3.80 0.00 37.74 2.29
1408 1450 6.696148 GGATGATACGTCACTGGTTAAACTAG 59.304 42.308 0.00 0.00 37.14 2.57
1421 1463 0.605589 AAACTAGTGCGAAGTGGGCC 60.606 55.000 0.00 0.00 0.00 5.80
1448 1490 2.300152 TCATGGGAGTTATGCGATCTCC 59.700 50.000 6.91 6.91 44.78 3.71
1512 1554 6.834168 TTTTGATTTGGTTAGGATCAGGAC 57.166 37.500 0.00 0.00 32.00 3.85
1532 1574 2.295909 ACTTTGTGGTTATTGCGCATGT 59.704 40.909 12.75 5.90 0.00 3.21
1611 1674 1.021390 GCAGAACCGGTCCTGACATG 61.021 60.000 26.78 8.91 32.37 3.21
1628 1691 0.806868 ATGCATTCAGACGTGCTTGG 59.193 50.000 0.00 0.00 41.78 3.61
1721 1784 5.931441 AAGAGCACTTCTTGTTGACATAC 57.069 39.130 0.00 0.00 44.46 2.39
1732 1795 2.080693 GTTGACATACGCATGGTTCCA 58.919 47.619 0.00 0.00 36.39 3.53
1781 1844 6.478512 TGTAAAATGCTCCCTTCAAAGTTT 57.521 33.333 0.00 0.00 0.00 2.66
1856 1919 3.674997 TGGGACTTTGAGCATAGTCAAC 58.325 45.455 18.31 12.62 39.93 3.18
1857 1920 2.673368 GGGACTTTGAGCATAGTCAACG 59.327 50.000 18.31 0.62 39.93 4.10
1869 1932 4.447054 GCATAGTCAACGGAATGATCAGAG 59.553 45.833 0.09 0.00 0.00 3.35
1878 1941 0.106335 AATGATCAGAGAGCAGGGCG 59.894 55.000 0.09 0.00 29.44 6.13
1909 1972 1.180029 CCTTGGCATTGTAGCTTGCT 58.820 50.000 7.97 0.00 38.88 3.91
1911 1974 1.814394 CTTGGCATTGTAGCTTGCTCA 59.186 47.619 7.97 2.37 38.88 4.26
1912 1975 1.167851 TGGCATTGTAGCTTGCTCAC 58.832 50.000 7.97 0.00 38.88 3.51
1917 1980 1.238439 TTGTAGCTTGCTCACTTGCC 58.762 50.000 0.00 0.00 0.00 4.52
1927 1990 1.770110 TCACTTGCCTGGGTCCTGT 60.770 57.895 0.00 0.00 0.00 4.00
1937 2000 2.248248 CTGGGTCCTGTAGTGTCTGAA 58.752 52.381 0.00 0.00 0.00 3.02
1946 2009 4.223032 CCTGTAGTGTCTGAATACCTGGTT 59.777 45.833 3.84 0.00 0.00 3.67
1969 2032 7.933033 GGTTACCAGGTTAATTCGTTATATCCA 59.067 37.037 0.00 0.00 0.00 3.41
2002 2065 5.627499 ATGGAATGTGTGTCAATGTGTAC 57.373 39.130 0.00 0.00 0.00 2.90
2006 2069 3.552132 TGTGTGTCAATGTGTACCTGT 57.448 42.857 0.00 0.00 0.00 4.00
2015 2078 0.319083 TGTGTACCTGTAACCTGCGG 59.681 55.000 0.00 0.00 0.00 5.69
2027 2090 1.153823 CCTGCGGTACCTTGTCTCG 60.154 63.158 10.90 0.00 0.00 4.04
2032 2095 1.467035 GCGGTACCTTGTCTCGTGTAG 60.467 57.143 10.90 0.00 0.00 2.74
2043 2106 4.457466 TGTCTCGTGTAGGCATGTAGATA 58.543 43.478 0.00 0.00 33.94 1.98
2046 2109 4.515567 TCTCGTGTAGGCATGTAGATACTG 59.484 45.833 0.00 0.00 33.51 2.74
2048 2111 3.654414 GTGTAGGCATGTAGATACTGGC 58.346 50.000 0.00 7.46 35.83 4.85
2055 2118 5.307976 AGGCATGTAGATACTGGCTTATTGA 59.692 40.000 10.54 0.00 42.46 2.57
2057 2120 5.991606 GCATGTAGATACTGGCTTATTGACA 59.008 40.000 0.00 0.00 0.00 3.58
2068 2131 5.759059 TGGCTTATTGACATTGATCCTTCT 58.241 37.500 0.00 0.00 0.00 2.85
2116 2189 6.528537 TTGGATCCACTTTAATGTGAATGG 57.471 37.500 15.91 6.29 40.12 3.16
2135 2208 8.789762 GTGAATGGGTTACTTGTAACTACAAAT 58.210 33.333 19.09 12.97 44.67 2.32
2157 2230 6.579666 ATTTTGAGACTCATTAGCAAAGCA 57.420 33.333 5.87 0.00 31.10 3.91
2161 2234 5.114780 TGAGACTCATTAGCAAAGCATCTC 58.885 41.667 0.00 0.00 0.00 2.75
2174 2247 3.853355 AGCATCTCTTGGGATTGTAGG 57.147 47.619 0.00 0.00 0.00 3.18
2190 2263 7.281100 GGGATTGTAGGTTTCTAACTCAATGAG 59.719 40.741 8.98 8.98 32.42 2.90
2200 2279 6.246420 TCTAACTCAATGAGCTTTGCTTTC 57.754 37.500 10.62 0.00 39.88 2.62
2245 2324 6.997655 TGAGCATATCGTCATATCTTCCTTT 58.002 36.000 0.00 0.00 0.00 3.11
2291 2370 9.813080 CATTGTTTGCTCTAGTAGAAAAGTAAC 57.187 33.333 0.64 3.16 33.07 2.50
2292 2371 8.951787 TTGTTTGCTCTAGTAGAAAAGTAACA 57.048 30.769 0.64 5.41 33.07 2.41
2293 2372 8.361592 TGTTTGCTCTAGTAGAAAAGTAACAC 57.638 34.615 0.64 0.00 33.07 3.32
2294 2373 7.982919 TGTTTGCTCTAGTAGAAAAGTAACACA 59.017 33.333 0.64 0.00 33.07 3.72
2295 2374 8.488764 GTTTGCTCTAGTAGAAAAGTAACACAG 58.511 37.037 0.64 0.00 33.07 3.66
2296 2375 6.688578 TGCTCTAGTAGAAAAGTAACACAGG 58.311 40.000 0.64 0.00 0.00 4.00
2297 2376 6.267014 TGCTCTAGTAGAAAAGTAACACAGGT 59.733 38.462 0.64 0.00 0.00 4.00
2298 2377 7.153315 GCTCTAGTAGAAAAGTAACACAGGTT 58.847 38.462 0.64 0.00 41.06 3.50
2299 2378 8.302438 GCTCTAGTAGAAAAGTAACACAGGTTA 58.698 37.037 0.64 0.00 38.45 2.85
2306 2385 8.095937 AGAAAAGTAACACAGGTTATTAGTGC 57.904 34.615 0.00 0.00 41.28 4.40
2307 2386 7.937394 AGAAAAGTAACACAGGTTATTAGTGCT 59.063 33.333 0.00 0.00 41.28 4.40
2308 2387 7.435068 AAAGTAACACAGGTTATTAGTGCTG 57.565 36.000 0.00 0.00 41.28 4.41
2309 2388 6.354794 AGTAACACAGGTTATTAGTGCTGA 57.645 37.500 0.00 0.00 41.28 4.26
2310 2389 6.765403 AGTAACACAGGTTATTAGTGCTGAA 58.235 36.000 0.00 0.00 41.28 3.02
2311 2390 7.394816 AGTAACACAGGTTATTAGTGCTGAAT 58.605 34.615 0.00 0.00 41.28 2.57
2312 2391 7.883311 AGTAACACAGGTTATTAGTGCTGAATT 59.117 33.333 0.00 0.00 41.28 2.17
2313 2392 6.743575 ACACAGGTTATTAGTGCTGAATTC 57.256 37.500 0.00 0.00 36.76 2.17
2314 2393 6.476378 ACACAGGTTATTAGTGCTGAATTCT 58.524 36.000 7.05 0.00 36.76 2.40
2315 2394 6.942576 ACACAGGTTATTAGTGCTGAATTCTT 59.057 34.615 7.05 0.00 36.76 2.52
2316 2395 8.100791 ACACAGGTTATTAGTGCTGAATTCTTA 58.899 33.333 7.05 0.00 36.76 2.10
2317 2396 8.607459 CACAGGTTATTAGTGCTGAATTCTTAG 58.393 37.037 7.05 0.00 0.00 2.18
2318 2397 8.322091 ACAGGTTATTAGTGCTGAATTCTTAGT 58.678 33.333 7.05 0.00 0.00 2.24
2319 2398 8.821894 CAGGTTATTAGTGCTGAATTCTTAGTC 58.178 37.037 7.05 0.00 0.00 2.59
2320 2399 7.988028 AGGTTATTAGTGCTGAATTCTTAGTCC 59.012 37.037 7.05 0.00 0.00 3.85
2321 2400 7.042658 GGTTATTAGTGCTGAATTCTTAGTCCG 60.043 40.741 7.05 0.00 0.00 4.79
2322 2401 5.654603 TTAGTGCTGAATTCTTAGTCCGA 57.345 39.130 7.05 0.00 0.00 4.55
2331 2410 7.591006 TGAATTCTTAGTCCGACATGTTAAC 57.409 36.000 7.05 0.00 0.00 2.01
2334 2413 5.670792 TCTTAGTCCGACATGTTAACCAT 57.329 39.130 0.00 0.00 0.00 3.55
2339 2418 5.253330 AGTCCGACATGTTAACCATCAATT 58.747 37.500 0.00 0.00 0.00 2.32
2361 2440 6.524101 TTCTTGAATCCGGAAATAAAAGGG 57.476 37.500 9.01 0.00 0.00 3.95
2382 2461 1.141185 GTCCTCCCCCTTAGGAATGG 58.859 60.000 0.00 0.00 44.67 3.16
2649 2891 0.034756 ACGTTGTGCATCTGGTAGCA 59.965 50.000 0.00 0.00 38.65 3.49
2662 2904 2.778299 TGGTAGCACCATGTGAAGAAC 58.222 47.619 4.16 0.00 44.79 3.01
2764 3006 4.236147 CTCTGATGTCGGCATTCTATCTG 58.764 47.826 2.92 0.00 35.07 2.90
2782 3024 2.227865 TCTGTTCAAAATTGCTACCGGC 59.772 45.455 0.00 0.00 42.22 6.13
2813 3055 3.594603 TCTCGCCAAAGAAAGAGTAGG 57.405 47.619 0.00 0.00 32.90 3.18
2821 3063 1.926108 AGAAAGAGTAGGCCAGACGT 58.074 50.000 5.01 0.00 0.00 4.34
2835 3077 1.299850 GACGTTGCTTGGCCAAACC 60.300 57.895 20.91 13.87 39.84 3.27
2889 3131 7.521529 CATTCGAATTGTAACTTGACTGATGT 58.478 34.615 8.21 0.00 0.00 3.06
2930 3172 6.479660 CACCTTTGCTCAAATGTTTTGTATGT 59.520 34.615 1.43 0.00 28.88 2.29
2984 3226 6.072112 ACTAACATTTCAATTGTGCTTCGT 57.928 33.333 5.13 0.00 0.00 3.85
3005 3247 2.143122 TGAGGCGCAAACTTGTCTTAG 58.857 47.619 10.83 0.00 0.00 2.18
3033 3275 5.916883 CCTGTTGTCATTGAGCAAAAGTAAG 59.083 40.000 13.46 2.00 30.14 2.34
3037 3279 7.282224 TGTTGTCATTGAGCAAAAGTAAGTACT 59.718 33.333 0.00 0.00 38.39 2.73
3057 3299 7.097834 AGTACTCCTAATTTCTTGTTCTTCGG 58.902 38.462 0.00 0.00 0.00 4.30
3064 3306 8.726988 CCTAATTTCTTGTTCTTCGGTTAATCA 58.273 33.333 0.00 0.00 0.00 2.57
3067 3309 5.545658 TCTTGTTCTTCGGTTAATCATGC 57.454 39.130 0.00 0.00 0.00 4.06
3075 3317 5.879777 TCTTCGGTTAATCATGCAGAATTGA 59.120 36.000 6.60 0.00 0.00 2.57
3099 3343 2.573009 TCTGGATCATGGTGTGTGATGT 59.427 45.455 0.00 0.00 36.49 3.06
3100 3344 2.681344 CTGGATCATGGTGTGTGATGTG 59.319 50.000 0.00 0.00 36.49 3.21
3248 3495 1.831736 CACCATAGGGAGTTTCGGAGT 59.168 52.381 0.00 0.00 38.05 3.85
3270 3517 0.028770 ACATGTTGTGCGTTGTTCCG 59.971 50.000 0.00 0.00 0.00 4.30
3278 3525 1.445582 GCGTTGTTCCGATCGACCT 60.446 57.895 18.66 0.00 0.00 3.85
3319 3567 1.695893 CCACATTCGCGTGCCTACTG 61.696 60.000 5.77 0.00 35.47 2.74
3324 3572 0.100682 TTCGCGTGCCTACTGATCTC 59.899 55.000 5.77 0.00 0.00 2.75
3342 3590 8.263640 ACTGATCTCATAGCTTGACTAATGTTT 58.736 33.333 0.00 0.00 33.57 2.83
3376 3624 0.169009 GGAGGTTGAAGACAATGCGC 59.831 55.000 0.00 0.00 38.32 6.09
3399 3647 2.873094 GTAACCAACCAAGGGCTAGT 57.127 50.000 0.00 0.00 0.00 2.57
3400 3648 3.150458 GTAACCAACCAAGGGCTAGTT 57.850 47.619 0.00 0.00 0.00 2.24
3401 3649 2.287977 AACCAACCAAGGGCTAGTTC 57.712 50.000 0.00 0.00 0.00 3.01
3402 3650 1.446016 ACCAACCAAGGGCTAGTTCT 58.554 50.000 0.00 0.00 0.00 3.01
3403 3651 1.780919 ACCAACCAAGGGCTAGTTCTT 59.219 47.619 0.00 0.00 0.00 2.52
3404 3652 2.177016 ACCAACCAAGGGCTAGTTCTTT 59.823 45.455 0.00 0.00 0.00 2.52
3405 3653 3.230976 CCAACCAAGGGCTAGTTCTTTT 58.769 45.455 0.00 0.00 0.00 2.27
3406 3654 3.255888 CCAACCAAGGGCTAGTTCTTTTC 59.744 47.826 0.00 0.00 0.00 2.29
3407 3655 2.779506 ACCAAGGGCTAGTTCTTTTCG 58.220 47.619 0.00 0.00 0.00 3.46
3408 3656 2.084546 CCAAGGGCTAGTTCTTTTCGG 58.915 52.381 0.00 0.00 0.00 4.30
3409 3657 1.468914 CAAGGGCTAGTTCTTTTCGGC 59.531 52.381 0.00 0.00 0.00 5.54
3410 3658 0.391263 AGGGCTAGTTCTTTTCGGCG 60.391 55.000 0.00 0.00 0.00 6.46
3411 3659 0.390735 GGGCTAGTTCTTTTCGGCGA 60.391 55.000 4.99 4.99 0.00 5.54
3412 3660 1.653151 GGCTAGTTCTTTTCGGCGAT 58.347 50.000 11.76 0.00 0.00 4.58
3413 3661 2.007608 GGCTAGTTCTTTTCGGCGATT 58.992 47.619 11.76 0.00 0.00 3.34
3414 3662 2.030579 GGCTAGTTCTTTTCGGCGATTC 59.969 50.000 11.76 0.00 0.00 2.52
3415 3663 2.671396 GCTAGTTCTTTTCGGCGATTCA 59.329 45.455 11.76 0.00 0.00 2.57
3416 3664 3.483738 GCTAGTTCTTTTCGGCGATTCAC 60.484 47.826 11.76 3.74 0.00 3.18
3417 3665 1.804748 AGTTCTTTTCGGCGATTCACC 59.195 47.619 11.76 0.00 0.00 4.02
3418 3666 1.135774 GTTCTTTTCGGCGATTCACCC 60.136 52.381 11.76 0.00 0.00 4.61
3419 3667 0.035598 TCTTTTCGGCGATTCACCCA 59.964 50.000 11.76 0.00 0.00 4.51
3420 3668 0.447801 CTTTTCGGCGATTCACCCAG 59.552 55.000 11.76 0.00 0.00 4.45
3421 3669 0.035598 TTTTCGGCGATTCACCCAGA 59.964 50.000 11.76 0.00 0.00 3.86
3422 3670 0.035598 TTTCGGCGATTCACCCAGAA 59.964 50.000 11.76 0.00 41.28 3.02
3428 3676 4.986467 ATTCACCCAGAATCGCCC 57.014 55.556 0.00 0.00 43.42 6.13
3429 3677 1.227383 ATTCACCCAGAATCGCCCC 59.773 57.895 0.00 0.00 43.42 5.80
3430 3678 2.284515 ATTCACCCAGAATCGCCCCC 62.285 60.000 0.00 0.00 43.42 5.40
3431 3679 3.411517 CACCCAGAATCGCCCCCT 61.412 66.667 0.00 0.00 0.00 4.79
3432 3680 3.090532 ACCCAGAATCGCCCCCTC 61.091 66.667 0.00 0.00 0.00 4.30
3433 3681 3.878667 CCCAGAATCGCCCCCTCC 61.879 72.222 0.00 0.00 0.00 4.30
3434 3682 3.878667 CCAGAATCGCCCCCTCCC 61.879 72.222 0.00 0.00 0.00 4.30
3435 3683 2.770048 CAGAATCGCCCCCTCCCT 60.770 66.667 0.00 0.00 0.00 4.20
3436 3684 1.459539 CAGAATCGCCCCCTCCCTA 60.460 63.158 0.00 0.00 0.00 3.53
3437 3685 1.152226 AGAATCGCCCCCTCCCTAG 60.152 63.158 0.00 0.00 0.00 3.02
3438 3686 2.849646 AATCGCCCCCTCCCTAGC 60.850 66.667 0.00 0.00 0.00 3.42
3439 3687 3.412350 AATCGCCCCCTCCCTAGCT 62.412 63.158 0.00 0.00 0.00 3.32
3440 3688 2.916553 AATCGCCCCCTCCCTAGCTT 62.917 60.000 0.00 0.00 0.00 3.74
3441 3689 2.032356 ATCGCCCCCTCCCTAGCTTA 62.032 60.000 0.00 0.00 0.00 3.09
3442 3690 1.536662 CGCCCCCTCCCTAGCTTAT 60.537 63.158 0.00 0.00 0.00 1.73
3443 3691 1.545706 CGCCCCCTCCCTAGCTTATC 61.546 65.000 0.00 0.00 0.00 1.75
3444 3692 1.202099 GCCCCCTCCCTAGCTTATCC 61.202 65.000 0.00 0.00 0.00 2.59
3445 3693 0.547954 CCCCCTCCCTAGCTTATCCC 60.548 65.000 0.00 0.00 0.00 3.85
3446 3694 0.193574 CCCCTCCCTAGCTTATCCCA 59.806 60.000 0.00 0.00 0.00 4.37
3447 3695 1.650528 CCCTCCCTAGCTTATCCCAG 58.349 60.000 0.00 0.00 0.00 4.45
3448 3696 1.150135 CCCTCCCTAGCTTATCCCAGA 59.850 57.143 0.00 0.00 0.00 3.86
3449 3697 2.427889 CCCTCCCTAGCTTATCCCAGAA 60.428 54.545 0.00 0.00 0.00 3.02
3450 3698 3.525862 CCTCCCTAGCTTATCCCAGAAT 58.474 50.000 0.00 0.00 0.00 2.40
3451 3699 3.517500 CCTCCCTAGCTTATCCCAGAATC 59.482 52.174 0.00 0.00 0.00 2.52
3452 3700 3.165875 TCCCTAGCTTATCCCAGAATCG 58.834 50.000 0.00 0.00 0.00 3.34
3453 3701 2.900546 CCCTAGCTTATCCCAGAATCGT 59.099 50.000 0.00 0.00 0.00 3.73
3454 3702 3.056465 CCCTAGCTTATCCCAGAATCGTC 60.056 52.174 0.00 0.00 0.00 4.20
3455 3703 3.574396 CCTAGCTTATCCCAGAATCGTCA 59.426 47.826 0.00 0.00 0.00 4.35
3456 3704 3.460857 AGCTTATCCCAGAATCGTCAC 57.539 47.619 0.00 0.00 0.00 3.67
3457 3705 3.034635 AGCTTATCCCAGAATCGTCACT 58.965 45.455 0.00 0.00 0.00 3.41
3458 3706 3.068873 AGCTTATCCCAGAATCGTCACTC 59.931 47.826 0.00 0.00 0.00 3.51
3459 3707 3.800604 GCTTATCCCAGAATCGTCACTCC 60.801 52.174 0.00 0.00 0.00 3.85
3460 3708 1.866015 ATCCCAGAATCGTCACTCCA 58.134 50.000 0.00 0.00 0.00 3.86
3461 3709 1.866015 TCCCAGAATCGTCACTCCAT 58.134 50.000 0.00 0.00 0.00 3.41
3462 3710 3.026707 TCCCAGAATCGTCACTCCATA 57.973 47.619 0.00 0.00 0.00 2.74
3463 3711 3.576861 TCCCAGAATCGTCACTCCATAT 58.423 45.455 0.00 0.00 0.00 1.78
3464 3712 3.967326 TCCCAGAATCGTCACTCCATATT 59.033 43.478 0.00 0.00 0.00 1.28
3465 3713 4.408921 TCCCAGAATCGTCACTCCATATTT 59.591 41.667 0.00 0.00 0.00 1.40
3466 3714 5.104527 TCCCAGAATCGTCACTCCATATTTT 60.105 40.000 0.00 0.00 0.00 1.82
3467 3715 5.590259 CCCAGAATCGTCACTCCATATTTTT 59.410 40.000 0.00 0.00 0.00 1.94
3504 3752 7.598759 TCTAGTTAAGGTCTAATTAGCTGGG 57.401 40.000 7.67 0.00 0.00 4.45
3505 3753 7.359849 TCTAGTTAAGGTCTAATTAGCTGGGA 58.640 38.462 7.67 0.00 0.00 4.37
3506 3754 8.011290 TCTAGTTAAGGTCTAATTAGCTGGGAT 58.989 37.037 7.67 0.00 0.00 3.85
3507 3755 7.453141 AGTTAAGGTCTAATTAGCTGGGATT 57.547 36.000 7.67 0.00 0.00 3.01
3508 3756 7.283329 AGTTAAGGTCTAATTAGCTGGGATTG 58.717 38.462 7.67 0.00 0.00 2.67
3509 3757 5.717119 AAGGTCTAATTAGCTGGGATTGT 57.283 39.130 7.67 0.00 0.00 2.71
3510 3758 6.824958 AAGGTCTAATTAGCTGGGATTGTA 57.175 37.500 7.67 0.00 0.00 2.41
3511 3759 6.824958 AGGTCTAATTAGCTGGGATTGTAA 57.175 37.500 7.67 0.00 0.00 2.41
3512 3760 7.208064 AGGTCTAATTAGCTGGGATTGTAAA 57.792 36.000 7.67 0.00 0.00 2.01
3513 3761 7.639378 AGGTCTAATTAGCTGGGATTGTAAAA 58.361 34.615 7.67 0.00 0.00 1.52
3514 3762 8.113462 AGGTCTAATTAGCTGGGATTGTAAAAA 58.887 33.333 7.67 0.00 0.00 1.94
3538 3786 6.764308 AAAACATATGGAGTGGTGATTCTG 57.236 37.500 7.80 0.00 0.00 3.02
3539 3787 4.428294 ACATATGGAGTGGTGATTCTGG 57.572 45.455 7.80 0.00 0.00 3.86
3540 3788 3.137176 ACATATGGAGTGGTGATTCTGGG 59.863 47.826 7.80 0.00 0.00 4.45
3541 3789 0.921896 ATGGAGTGGTGATTCTGGGG 59.078 55.000 0.00 0.00 0.00 4.96
3542 3790 0.178876 TGGAGTGGTGATTCTGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
3543 3791 0.543749 GGAGTGGTGATTCTGGGGAG 59.456 60.000 0.00 0.00 0.00 4.30
3544 3792 1.280457 GAGTGGTGATTCTGGGGAGT 58.720 55.000 0.00 0.00 0.00 3.85
3545 3793 2.467880 GAGTGGTGATTCTGGGGAGTA 58.532 52.381 0.00 0.00 0.00 2.59
3546 3794 2.838202 GAGTGGTGATTCTGGGGAGTAA 59.162 50.000 0.00 0.00 0.00 2.24
3547 3795 3.256704 AGTGGTGATTCTGGGGAGTAAA 58.743 45.455 0.00 0.00 0.00 2.01
3548 3796 3.852578 AGTGGTGATTCTGGGGAGTAAAT 59.147 43.478 0.00 0.00 0.00 1.40
3549 3797 5.036916 AGTGGTGATTCTGGGGAGTAAATA 58.963 41.667 0.00 0.00 0.00 1.40
3550 3798 5.131142 AGTGGTGATTCTGGGGAGTAAATAG 59.869 44.000 0.00 0.00 0.00 1.73
3551 3799 4.141482 TGGTGATTCTGGGGAGTAAATAGC 60.141 45.833 0.00 0.00 0.00 2.97
3552 3800 4.141482 GGTGATTCTGGGGAGTAAATAGCA 60.141 45.833 0.00 0.00 0.00 3.49
3553 3801 5.456763 GGTGATTCTGGGGAGTAAATAGCAT 60.457 44.000 0.00 0.00 0.00 3.79
3554 3802 6.239887 GGTGATTCTGGGGAGTAAATAGCATA 60.240 42.308 0.00 0.00 0.00 3.14
3555 3803 7.224297 GTGATTCTGGGGAGTAAATAGCATAA 58.776 38.462 0.00 0.00 0.00 1.90
3556 3804 7.719633 GTGATTCTGGGGAGTAAATAGCATAAA 59.280 37.037 0.00 0.00 0.00 1.40
3557 3805 8.278639 TGATTCTGGGGAGTAAATAGCATAAAA 58.721 33.333 0.00 0.00 0.00 1.52
3558 3806 7.875327 TTCTGGGGAGTAAATAGCATAAAAC 57.125 36.000 0.00 0.00 0.00 2.43
3559 3807 7.208064 TCTGGGGAGTAAATAGCATAAAACT 57.792 36.000 0.00 0.00 0.00 2.66
3560 3808 8.326765 TCTGGGGAGTAAATAGCATAAAACTA 57.673 34.615 0.00 0.00 0.00 2.24
3561 3809 8.208903 TCTGGGGAGTAAATAGCATAAAACTAC 58.791 37.037 0.00 0.00 0.00 2.73
3562 3810 8.097791 TGGGGAGTAAATAGCATAAAACTACT 57.902 34.615 0.00 0.00 0.00 2.57
3563 3811 9.216148 TGGGGAGTAAATAGCATAAAACTACTA 57.784 33.333 0.00 0.00 0.00 1.82
3564 3812 9.708092 GGGGAGTAAATAGCATAAAACTACTAG 57.292 37.037 0.00 0.00 0.00 2.57
3579 3827 7.862274 AAACTACTAGTTTACAGGTTAGGGT 57.138 36.000 11.79 0.00 45.75 4.34
3580 3828 7.862274 AACTACTAGTTTACAGGTTAGGGTT 57.138 36.000 0.00 0.00 34.11 4.11
3581 3829 7.473735 ACTACTAGTTTACAGGTTAGGGTTC 57.526 40.000 0.00 0.00 0.00 3.62
3582 3830 7.244558 ACTACTAGTTTACAGGTTAGGGTTCT 58.755 38.462 0.00 0.00 0.00 3.01
3583 3831 8.394040 ACTACTAGTTTACAGGTTAGGGTTCTA 58.606 37.037 0.00 0.00 0.00 2.10
3584 3832 9.247861 CTACTAGTTTACAGGTTAGGGTTCTAA 57.752 37.037 0.00 0.00 33.43 2.10
3585 3833 8.496534 ACTAGTTTACAGGTTAGGGTTCTAAA 57.503 34.615 0.00 0.00 37.24 1.85
3586 3834 8.937835 ACTAGTTTACAGGTTAGGGTTCTAAAA 58.062 33.333 0.00 0.00 37.24 1.52
3587 3835 9.783081 CTAGTTTACAGGTTAGGGTTCTAAAAA 57.217 33.333 0.00 0.00 37.24 1.94
3617 3865 9.098355 ACCACTTTTTAATTTTTCTCAGAAAGC 57.902 29.630 0.00 0.00 0.00 3.51
3618 3866 9.317936 CCACTTTTTAATTTTTCTCAGAAAGCT 57.682 29.630 0.00 0.00 0.00 3.74
3625 3873 9.744468 TTAATTTTTCTCAGAAAGCTACCAAAC 57.256 29.630 0.00 0.00 0.00 2.93
3626 3874 5.418310 TTTTCTCAGAAAGCTACCAAACG 57.582 39.130 0.00 0.00 0.00 3.60
3627 3875 2.413837 TCTCAGAAAGCTACCAAACGC 58.586 47.619 0.00 0.00 0.00 4.84
3628 3876 1.126846 CTCAGAAAGCTACCAAACGCG 59.873 52.381 3.53 3.53 0.00 6.01
3629 3877 0.452784 CAGAAAGCTACCAAACGCGC 60.453 55.000 5.73 0.00 0.00 6.86
3630 3878 1.509162 GAAAGCTACCAAACGCGCG 60.509 57.895 30.96 30.96 0.00 6.86
3631 3879 2.827959 GAAAGCTACCAAACGCGCGG 62.828 60.000 35.22 18.70 0.00 6.46
3632 3880 4.675029 AGCTACCAAACGCGCGGT 62.675 61.111 35.22 28.24 39.41 5.68
3633 3881 4.143363 GCTACCAAACGCGCGGTC 62.143 66.667 35.22 10.99 36.69 4.79
3634 3882 3.484547 CTACCAAACGCGCGGTCC 61.485 66.667 35.22 0.00 36.69 4.46
3647 3895 3.928343 CGGTCCGCTGTTTCAAAAA 57.072 47.368 0.00 0.00 0.00 1.94
3661 3909 2.816012 AAAAACCCAAACCCGCGG 59.184 55.556 21.04 21.04 0.00 6.46
3662 3910 2.059190 AAAAACCCAAACCCGCGGT 61.059 52.632 26.12 9.63 37.65 5.68
3663 3911 2.299503 AAAAACCCAAACCCGCGGTG 62.300 55.000 26.12 18.04 35.34 4.94
3664 3912 3.717924 AAACCCAAACCCGCGGTGA 62.718 57.895 26.12 0.00 35.34 4.02
3665 3913 4.941309 ACCCAAACCCGCGGTGAC 62.941 66.667 26.12 0.00 35.34 3.67
3666 3914 4.636435 CCCAAACCCGCGGTGACT 62.636 66.667 26.12 1.92 35.34 3.41
3667 3915 2.344500 CCAAACCCGCGGTGACTA 59.656 61.111 26.12 0.00 35.34 2.59
3668 3916 1.740296 CCAAACCCGCGGTGACTAG 60.740 63.158 26.12 10.10 35.34 2.57
3669 3917 2.047560 AAACCCGCGGTGACTAGC 60.048 61.111 26.12 0.00 35.34 3.42
3680 3928 2.884827 GGTGACTAGCGATTTAACCGT 58.115 47.619 0.00 0.00 0.00 4.83
3681 3929 3.256558 GGTGACTAGCGATTTAACCGTT 58.743 45.455 0.00 0.00 0.00 4.44
3682 3930 3.681417 GGTGACTAGCGATTTAACCGTTT 59.319 43.478 0.00 0.00 0.00 3.60
3683 3931 4.152938 GGTGACTAGCGATTTAACCGTTTT 59.847 41.667 0.00 0.00 0.00 2.43
3684 3932 5.334337 GGTGACTAGCGATTTAACCGTTTTT 60.334 40.000 0.00 0.00 0.00 1.94
3685 3933 5.787062 GTGACTAGCGATTTAACCGTTTTTC 59.213 40.000 0.00 0.00 0.00 2.29
3686 3934 5.697633 TGACTAGCGATTTAACCGTTTTTCT 59.302 36.000 0.00 0.00 0.00 2.52
3687 3935 5.923665 ACTAGCGATTTAACCGTTTTTCTG 58.076 37.500 0.00 0.00 0.00 3.02
3688 3936 5.697633 ACTAGCGATTTAACCGTTTTTCTGA 59.302 36.000 0.00 0.00 0.00 3.27
3689 3937 4.779987 AGCGATTTAACCGTTTTTCTGAC 58.220 39.130 0.00 0.00 0.00 3.51
3690 3938 3.596562 GCGATTTAACCGTTTTTCTGACG 59.403 43.478 0.00 0.00 40.05 4.35
3697 3945 2.611974 CGTTTTTCTGACGGATTGGG 57.388 50.000 0.00 0.00 36.90 4.12
3698 3946 1.401018 CGTTTTTCTGACGGATTGGGC 60.401 52.381 0.00 0.00 36.90 5.36
3699 3947 1.067846 GTTTTTCTGACGGATTGGGCC 60.068 52.381 0.00 0.00 0.00 5.80
3700 3948 0.610785 TTTTCTGACGGATTGGGCCC 60.611 55.000 17.59 17.59 0.00 5.80
3701 3949 1.784301 TTTCTGACGGATTGGGCCCA 61.784 55.000 24.45 24.45 0.00 5.36
3702 3950 2.438434 CTGACGGATTGGGCCCAC 60.438 66.667 28.70 15.02 0.00 4.61
3703 3951 3.253061 TGACGGATTGGGCCCACA 61.253 61.111 28.70 16.15 0.00 4.17
3704 3952 2.275418 GACGGATTGGGCCCACAT 59.725 61.111 28.70 21.18 0.00 3.21
3705 3953 2.044053 ACGGATTGGGCCCACATG 60.044 61.111 28.70 17.51 0.00 3.21
3706 3954 3.530260 CGGATTGGGCCCACATGC 61.530 66.667 28.70 23.57 0.00 4.06
3716 3964 4.371417 CCACATGCCAGGCCACCT 62.371 66.667 9.64 0.00 0.00 4.00
3757 4005 3.098555 CCGTTGATGGCCGTTAGC 58.901 61.111 0.00 0.00 42.60 3.09
3758 4006 1.449601 CCGTTGATGGCCGTTAGCT 60.450 57.895 0.00 0.00 43.05 3.32
3759 4007 1.705337 CCGTTGATGGCCGTTAGCTG 61.705 60.000 0.00 0.00 43.05 4.24
3760 4008 0.739462 CGTTGATGGCCGTTAGCTGA 60.739 55.000 0.00 0.00 43.05 4.26
3761 4009 0.727398 GTTGATGGCCGTTAGCTGAC 59.273 55.000 0.00 0.00 43.05 3.51
3762 4010 0.739462 TTGATGGCCGTTAGCTGACG 60.739 55.000 22.91 22.91 43.05 4.35
3763 4011 2.511600 ATGGCCGTTAGCTGACGC 60.512 61.111 24.26 18.54 43.05 5.19
3767 4015 2.879462 CCGTTAGCTGACGCGGTC 60.879 66.667 24.26 6.39 41.50 4.79
3768 4016 2.879462 CGTTAGCTGACGCGGTCC 60.879 66.667 18.52 0.00 42.32 4.46
3769 4017 2.879462 GTTAGCTGACGCGGTCCG 60.879 66.667 12.47 6.99 42.32 4.79
3770 4018 4.124351 TTAGCTGACGCGGTCCGG 62.124 66.667 14.38 5.79 42.52 5.14
3781 4029 3.308705 GGTCCGGTCGGAACCACT 61.309 66.667 15.91 0.00 45.91 4.00
3782 4030 2.260743 GTCCGGTCGGAACCACTC 59.739 66.667 14.07 0.00 46.86 3.51
3783 4031 2.116772 TCCGGTCGGAACCACTCT 59.883 61.111 9.90 0.00 46.86 3.24
3784 4032 1.975407 TCCGGTCGGAACCACTCTC 60.975 63.158 9.90 0.00 46.86 3.20
3785 4033 1.977544 CCGGTCGGAACCACTCTCT 60.978 63.158 2.83 0.00 46.86 3.10
3786 4034 1.507174 CGGTCGGAACCACTCTCTC 59.493 63.158 0.00 0.00 46.86 3.20
3787 4035 1.507174 GGTCGGAACCACTCTCTCG 59.493 63.158 0.00 0.00 45.68 4.04
3788 4036 1.153997 GTCGGAACCACTCTCTCGC 60.154 63.158 0.00 0.00 0.00 5.03
3789 4037 1.303398 TCGGAACCACTCTCTCGCT 60.303 57.895 0.00 0.00 0.00 4.93
3790 4038 1.137825 CGGAACCACTCTCTCGCTC 59.862 63.158 0.00 0.00 0.00 5.03
3791 4039 1.513622 GGAACCACTCTCTCGCTCC 59.486 63.158 0.00 0.00 0.00 4.70
3792 4040 1.513622 GAACCACTCTCTCGCTCCC 59.486 63.158 0.00 0.00 0.00 4.30
3793 4041 1.950973 GAACCACTCTCTCGCTCCCC 61.951 65.000 0.00 0.00 0.00 4.81
3794 4042 3.151022 CCACTCTCTCGCTCCCCC 61.151 72.222 0.00 0.00 0.00 5.40
3795 4043 2.043450 CACTCTCTCGCTCCCCCT 60.043 66.667 0.00 0.00 0.00 4.79
3796 4044 2.124693 CACTCTCTCGCTCCCCCTC 61.125 68.421 0.00 0.00 0.00 4.30
3797 4045 2.520741 CTCTCTCGCTCCCCCTCC 60.521 72.222 0.00 0.00 0.00 4.30
3798 4046 3.024356 TCTCTCGCTCCCCCTCCT 61.024 66.667 0.00 0.00 0.00 3.69
3799 4047 2.520741 CTCTCGCTCCCCCTCCTC 60.521 72.222 0.00 0.00 0.00 3.71
3800 4048 3.024356 TCTCGCTCCCCCTCCTCT 61.024 66.667 0.00 0.00 0.00 3.69
3801 4049 2.520741 CTCGCTCCCCCTCCTCTC 60.521 72.222 0.00 0.00 0.00 3.20
3802 4050 4.144727 TCGCTCCCCCTCCTCTCC 62.145 72.222 0.00 0.00 0.00 3.71
3803 4051 4.465446 CGCTCCCCCTCCTCTCCA 62.465 72.222 0.00 0.00 0.00 3.86
3804 4052 2.766229 GCTCCCCCTCCTCTCCAC 60.766 72.222 0.00 0.00 0.00 4.02
3805 4053 2.041405 CTCCCCCTCCTCTCCACC 60.041 72.222 0.00 0.00 0.00 4.61
3806 4054 2.540910 TCCCCCTCCTCTCCACCT 60.541 66.667 0.00 0.00 0.00 4.00
3807 4055 2.041405 CCCCCTCCTCTCCACCTC 60.041 72.222 0.00 0.00 0.00 3.85
3808 4056 2.041405 CCCCTCCTCTCCACCTCC 60.041 72.222 0.00 0.00 0.00 4.30
3809 4057 2.641746 CCCCTCCTCTCCACCTCCT 61.642 68.421 0.00 0.00 0.00 3.69
3810 4058 1.075600 CCCTCCTCTCCACCTCCTC 60.076 68.421 0.00 0.00 0.00 3.71
3811 4059 1.589399 CCCTCCTCTCCACCTCCTCT 61.589 65.000 0.00 0.00 0.00 3.69
3812 4060 0.106217 CCTCCTCTCCACCTCCTCTC 60.106 65.000 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 57 6.531021 AGAAGGTCTTTTCGTTAGGATTTCA 58.469 36.000 0.00 0.00 32.33 2.69
64 67 5.526479 GGTCTTGTTTAGAAGGTCTTTTCGT 59.474 40.000 0.00 0.00 33.81 3.85
106 109 6.075046 GCAGGTCTAAAAATTCAAACACGTTC 60.075 38.462 0.00 0.00 0.00 3.95
188 191 6.852858 TGTTATCACTTGTGAATTCGTGAA 57.147 33.333 15.04 1.84 39.52 3.18
189 192 6.481976 AGTTGTTATCACTTGTGAATTCGTGA 59.518 34.615 13.89 13.89 40.27 4.35
190 193 6.658831 AGTTGTTATCACTTGTGAATTCGTG 58.341 36.000 7.57 3.08 0.00 4.35
191 194 6.861065 AGTTGTTATCACTTGTGAATTCGT 57.139 33.333 7.57 0.00 0.00 3.85
192 195 9.825972 AAATAGTTGTTATCACTTGTGAATTCG 57.174 29.630 7.57 0.00 0.00 3.34
196 199 9.554395 TCTGAAATAGTTGTTATCACTTGTGAA 57.446 29.630 7.57 0.00 0.00 3.18
197 200 9.554395 TTCTGAAATAGTTGTTATCACTTGTGA 57.446 29.630 5.89 5.89 0.00 3.58
344 348 5.497474 TCTATCTCTAAACTTGGCCAAACC 58.503 41.667 20.91 0.00 39.84 3.27
365 369 9.326489 TGTGGCTTTATAGATATAGATGGTTCT 57.674 33.333 0.00 0.00 35.90 3.01
402 406 6.092259 GGGTACACTCTCACATGTATTTTCAC 59.908 42.308 0.00 0.00 34.00 3.18
525 529 4.098960 CCTCCATTTTCATAATGCAGTGCT 59.901 41.667 17.60 0.00 0.00 4.40
531 535 7.945134 ACATACTTCCTCCATTTTCATAATGC 58.055 34.615 0.00 0.00 0.00 3.56
592 596 8.380099 TCTGTCCTGTAATATAAAAGTGTTGGT 58.620 33.333 0.00 0.00 0.00 3.67
593 597 8.786826 TCTGTCCTGTAATATAAAAGTGTTGG 57.213 34.615 0.00 0.00 0.00 3.77
594 598 8.883731 CCTCTGTCCTGTAATATAAAAGTGTTG 58.116 37.037 0.00 0.00 0.00 3.33
596 600 7.402071 TCCCTCTGTCCTGTAATATAAAAGTGT 59.598 37.037 0.00 0.00 0.00 3.55
597 601 7.792032 TCCCTCTGTCCTGTAATATAAAAGTG 58.208 38.462 0.00 0.00 0.00 3.16
599 603 7.445945 CCTCCCTCTGTCCTGTAATATAAAAG 58.554 42.308 0.00 0.00 0.00 2.27
600 604 6.329197 CCCTCCCTCTGTCCTGTAATATAAAA 59.671 42.308 0.00 0.00 0.00 1.52
602 606 5.102783 ACCCTCCCTCTGTCCTGTAATATAA 60.103 44.000 0.00 0.00 0.00 0.98
603 607 4.422592 ACCCTCCCTCTGTCCTGTAATATA 59.577 45.833 0.00 0.00 0.00 0.86
604 608 3.210074 ACCCTCCCTCTGTCCTGTAATAT 59.790 47.826 0.00 0.00 0.00 1.28
605 609 2.590611 ACCCTCCCTCTGTCCTGTAATA 59.409 50.000 0.00 0.00 0.00 0.98
606 610 1.366435 ACCCTCCCTCTGTCCTGTAAT 59.634 52.381 0.00 0.00 0.00 1.89
607 611 0.790993 ACCCTCCCTCTGTCCTGTAA 59.209 55.000 0.00 0.00 0.00 2.41
608 612 0.041238 CACCCTCCCTCTGTCCTGTA 59.959 60.000 0.00 0.00 0.00 2.74
609 613 1.229336 CACCCTCCCTCTGTCCTGT 60.229 63.158 0.00 0.00 0.00 4.00
610 614 0.545309 TTCACCCTCCCTCTGTCCTG 60.545 60.000 0.00 0.00 0.00 3.86
611 615 0.193574 TTTCACCCTCCCTCTGTCCT 59.806 55.000 0.00 0.00 0.00 3.85
612 616 1.290134 ATTTCACCCTCCCTCTGTCC 58.710 55.000 0.00 0.00 0.00 4.02
613 617 2.436173 CCTATTTCACCCTCCCTCTGTC 59.564 54.545 0.00 0.00 0.00 3.51
614 618 2.482494 CCTATTTCACCCTCCCTCTGT 58.518 52.381 0.00 0.00 0.00 3.41
615 619 1.141858 GCCTATTTCACCCTCCCTCTG 59.858 57.143 0.00 0.00 0.00 3.35
616 620 1.274416 TGCCTATTTCACCCTCCCTCT 60.274 52.381 0.00 0.00 0.00 3.69
617 621 1.134068 GTGCCTATTTCACCCTCCCTC 60.134 57.143 0.00 0.00 0.00 4.30
618 622 0.919710 GTGCCTATTTCACCCTCCCT 59.080 55.000 0.00 0.00 0.00 4.20
619 623 0.919710 AGTGCCTATTTCACCCTCCC 59.080 55.000 0.00 0.00 35.14 4.30
620 624 1.559682 TCAGTGCCTATTTCACCCTCC 59.440 52.381 0.00 0.00 35.14 4.30
621 625 3.350219 TTCAGTGCCTATTTCACCCTC 57.650 47.619 0.00 0.00 35.14 4.30
622 626 3.806949 TTTCAGTGCCTATTTCACCCT 57.193 42.857 0.00 0.00 35.14 4.34
623 627 3.763897 ACATTTCAGTGCCTATTTCACCC 59.236 43.478 0.00 0.00 35.14 4.61
624 628 5.391312 AACATTTCAGTGCCTATTTCACC 57.609 39.130 0.00 0.00 35.14 4.02
625 629 6.446318 TCAAACATTTCAGTGCCTATTTCAC 58.554 36.000 0.00 0.00 34.80 3.18
656 660 8.735315 TCAGTTATTTGAAATATTTCCGAAGCA 58.265 29.630 22.42 3.66 36.36 3.91
728 733 8.575589 TGTTGCACATTTCACTTATTTCAGTAT 58.424 29.630 0.00 0.00 0.00 2.12
764 772 4.071423 TCATTCATCTTCTCCGCACAAAA 58.929 39.130 0.00 0.00 0.00 2.44
765 773 3.673902 TCATTCATCTTCTCCGCACAAA 58.326 40.909 0.00 0.00 0.00 2.83
766 774 3.055891 TCTCATTCATCTTCTCCGCACAA 60.056 43.478 0.00 0.00 0.00 3.33
767 775 2.497273 TCTCATTCATCTTCTCCGCACA 59.503 45.455 0.00 0.00 0.00 4.57
841 855 3.038017 GTTTTCTAACGGCGTTGGTTTC 58.962 45.455 33.37 18.09 0.00 2.78
1256 1298 7.488322 TCCGTTTCTTTTCTTTTGTGATGAAT 58.512 30.769 0.00 0.00 0.00 2.57
1305 1347 2.955660 ACAGAAACAAGAAAATGGCGGA 59.044 40.909 0.00 0.00 0.00 5.54
1332 1374 3.391506 TCTGAATGGCAGTATGATCCG 57.608 47.619 0.00 0.00 45.14 4.18
1342 1384 5.305128 ACATTTTTCCTTCTTCTGAATGGCA 59.695 36.000 0.00 0.00 0.00 4.92
1344 1386 9.933723 AAATACATTTTTCCTTCTTCTGAATGG 57.066 29.630 0.00 0.00 0.00 3.16
1358 1400 8.658609 CCACCATCAATGACAAATACATTTTTC 58.341 33.333 0.00 0.00 36.07 2.29
1367 1409 6.016860 CGTATCATCCACCATCAATGACAAAT 60.017 38.462 0.00 0.00 32.58 2.32
1421 1463 0.880278 CATAACTCCCATGACGCCCG 60.880 60.000 0.00 0.00 0.00 6.13
1426 1468 3.321497 GAGATCGCATAACTCCCATGAC 58.679 50.000 0.00 0.00 0.00 3.06
1512 1554 2.945278 ACATGCGCAATAACCACAAAG 58.055 42.857 17.11 0.00 0.00 2.77
1532 1574 8.380742 ACAGAAATCTCTAGTCCAATTTCCTA 57.619 34.615 13.30 0.00 38.36 2.94
1611 1674 1.503542 CCCAAGCACGTCTGAATGC 59.496 57.895 6.99 6.99 42.39 3.56
1721 1784 1.172180 AACCACACTGGAACCATGCG 61.172 55.000 0.00 0.00 40.96 4.73
1732 1795 7.503566 AGCAATGCATTCTATTATAACCACACT 59.496 33.333 9.53 0.00 0.00 3.55
1781 1844 5.423886 TGATACACCGATGCAATTAACTGA 58.576 37.500 0.00 0.00 0.00 3.41
1834 1897 4.072131 GTTGACTATGCTCAAAGTCCCAA 58.928 43.478 0.00 0.00 41.19 4.12
1856 1919 1.270199 CCCTGCTCTCTGATCATTCCG 60.270 57.143 0.00 0.00 0.00 4.30
1857 1920 1.542987 GCCCTGCTCTCTGATCATTCC 60.543 57.143 0.00 0.00 0.00 3.01
1888 1951 1.545582 GCAAGCTACAATGCCAAGGAA 59.454 47.619 0.00 0.00 36.56 3.36
1889 1952 1.176527 GCAAGCTACAATGCCAAGGA 58.823 50.000 0.00 0.00 36.56 3.36
1903 1966 2.633509 CCCAGGCAAGTGAGCAAGC 61.634 63.158 0.00 0.00 35.83 4.01
1904 1967 1.228367 ACCCAGGCAAGTGAGCAAG 60.228 57.895 0.00 0.00 35.83 4.01
1909 1972 0.472925 TACAGGACCCAGGCAAGTGA 60.473 55.000 0.00 0.00 0.00 3.41
1911 1974 0.473886 ACTACAGGACCCAGGCAAGT 60.474 55.000 0.00 0.00 0.00 3.16
1912 1975 0.036010 CACTACAGGACCCAGGCAAG 60.036 60.000 0.00 0.00 0.00 4.01
1917 1980 1.924731 TCAGACACTACAGGACCCAG 58.075 55.000 0.00 0.00 0.00 4.45
1927 1990 5.335261 TGGTAACCAGGTATTCAGACACTA 58.665 41.667 0.00 0.00 0.00 2.74
1946 2009 8.872134 TGATGGATATAACGAATTAACCTGGTA 58.128 33.333 0.00 0.00 0.00 3.25
2015 2078 1.542915 TGCCTACACGAGACAAGGTAC 59.457 52.381 0.00 0.00 0.00 3.34
2027 2090 3.322254 AGCCAGTATCTACATGCCTACAC 59.678 47.826 0.00 0.00 0.00 2.90
2032 2095 5.409826 GTCAATAAGCCAGTATCTACATGCC 59.590 44.000 0.00 0.00 0.00 4.40
2043 2106 5.121380 AGGATCAATGTCAATAAGCCAGT 57.879 39.130 0.00 0.00 0.00 4.00
2046 2109 7.807977 TTAGAAGGATCAATGTCAATAAGCC 57.192 36.000 0.00 0.00 0.00 4.35
2078 2141 8.004087 AGTGGATCCAAATATCAAACATCAAG 57.996 34.615 18.20 0.00 0.00 3.02
2094 2167 4.955450 CCCATTCACATTAAAGTGGATCCA 59.045 41.667 11.44 11.44 35.54 3.41
2135 2208 6.432162 AGATGCTTTGCTAATGAGTCTCAAAA 59.568 34.615 6.64 1.76 0.00 2.44
2142 2215 4.639310 CCAAGAGATGCTTTGCTAATGAGT 59.361 41.667 0.00 0.00 33.60 3.41
2157 2230 7.182930 AGTTAGAAACCTACAATCCCAAGAGAT 59.817 37.037 0.00 0.00 0.00 2.75
2161 2234 6.472887 TGAGTTAGAAACCTACAATCCCAAG 58.527 40.000 0.00 0.00 0.00 3.61
2174 2247 6.006759 AGCAAAGCTCATTGAGTTAGAAAC 57.993 37.500 14.90 0.00 30.62 2.78
2245 2324 6.601613 ACAATGTTCCAGTTAAAGTTCTGTGA 59.398 34.615 0.00 0.00 0.00 3.58
2291 2370 6.992063 AGAATTCAGCACTAATAACCTGTG 57.008 37.500 8.44 0.00 35.08 3.66
2292 2371 8.322091 ACTAAGAATTCAGCACTAATAACCTGT 58.678 33.333 8.44 0.00 0.00 4.00
2293 2372 8.723942 ACTAAGAATTCAGCACTAATAACCTG 57.276 34.615 8.44 0.00 0.00 4.00
2294 2373 7.988028 GGACTAAGAATTCAGCACTAATAACCT 59.012 37.037 8.44 0.00 0.00 3.50
2295 2374 7.042658 CGGACTAAGAATTCAGCACTAATAACC 60.043 40.741 8.44 0.00 0.00 2.85
2296 2375 7.705325 TCGGACTAAGAATTCAGCACTAATAAC 59.295 37.037 8.44 0.00 0.00 1.89
2297 2376 7.705325 GTCGGACTAAGAATTCAGCACTAATAA 59.295 37.037 8.44 0.00 0.00 1.40
2298 2377 7.147966 TGTCGGACTAAGAATTCAGCACTAATA 60.148 37.037 8.44 0.00 0.00 0.98
2299 2378 6.043411 GTCGGACTAAGAATTCAGCACTAAT 58.957 40.000 8.44 0.00 0.00 1.73
2300 2379 5.047590 TGTCGGACTAAGAATTCAGCACTAA 60.048 40.000 8.44 0.00 0.00 2.24
2301 2380 4.461431 TGTCGGACTAAGAATTCAGCACTA 59.539 41.667 8.44 0.00 0.00 2.74
2302 2381 3.258372 TGTCGGACTAAGAATTCAGCACT 59.742 43.478 8.44 0.00 0.00 4.40
2303 2382 3.585862 TGTCGGACTAAGAATTCAGCAC 58.414 45.455 8.44 0.00 0.00 4.40
2304 2383 3.953712 TGTCGGACTAAGAATTCAGCA 57.046 42.857 8.44 0.00 0.00 4.41
2305 2384 4.184629 ACATGTCGGACTAAGAATTCAGC 58.815 43.478 8.44 0.00 0.00 4.26
2306 2385 7.201530 GGTTAACATGTCGGACTAAGAATTCAG 60.202 40.741 8.44 0.00 0.00 3.02
2307 2386 6.592607 GGTTAACATGTCGGACTAAGAATTCA 59.407 38.462 8.44 0.00 0.00 2.57
2308 2387 6.592607 TGGTTAACATGTCGGACTAAGAATTC 59.407 38.462 9.88 0.00 0.00 2.17
2309 2388 6.469410 TGGTTAACATGTCGGACTAAGAATT 58.531 36.000 9.88 0.00 0.00 2.17
2310 2389 6.045072 TGGTTAACATGTCGGACTAAGAAT 57.955 37.500 9.88 0.00 0.00 2.40
2311 2390 5.471556 TGGTTAACATGTCGGACTAAGAA 57.528 39.130 9.88 0.00 0.00 2.52
2312 2391 5.186215 TGATGGTTAACATGTCGGACTAAGA 59.814 40.000 9.88 0.00 40.72 2.10
2313 2392 5.416083 TGATGGTTAACATGTCGGACTAAG 58.584 41.667 9.88 1.93 40.72 2.18
2314 2393 5.408880 TGATGGTTAACATGTCGGACTAA 57.591 39.130 9.88 0.00 40.72 2.24
2315 2394 5.408880 TTGATGGTTAACATGTCGGACTA 57.591 39.130 9.88 0.00 40.72 2.59
2316 2395 3.973206 TGATGGTTAACATGTCGGACT 57.027 42.857 9.88 0.00 40.72 3.85
2317 2396 5.354234 AGAATTGATGGTTAACATGTCGGAC 59.646 40.000 8.10 0.00 40.72 4.79
2318 2397 5.496556 AGAATTGATGGTTAACATGTCGGA 58.503 37.500 8.10 0.00 40.72 4.55
2319 2398 5.818136 AGAATTGATGGTTAACATGTCGG 57.182 39.130 8.10 0.00 40.72 4.79
2339 2418 5.822204 TCCCTTTTATTTCCGGATTCAAGA 58.178 37.500 4.15 0.00 0.00 3.02
2361 2440 2.050918 CATTCCTAAGGGGGAGGACTC 58.949 57.143 0.00 0.00 42.96 3.36
2372 2451 4.145052 GCATAACCTTCCCCATTCCTAAG 58.855 47.826 0.00 0.00 0.00 2.18
2382 2461 5.163550 GGTACATTTCTTGCATAACCTTCCC 60.164 44.000 0.00 0.00 0.00 3.97
2388 2467 8.391106 CAAGAGTAGGTACATTTCTTGCATAAC 58.609 37.037 16.36 0.00 38.55 1.89
2582 2661 7.398024 TGGTTGGAAAAGAAAAAGGAAATGAA 58.602 30.769 0.00 0.00 0.00 2.57
2764 3006 1.613270 CGCCGGTAGCAATTTTGAAC 58.387 50.000 1.90 0.00 44.04 3.18
2782 3024 2.485122 GGCGAGAAATGGTTGCCG 59.515 61.111 0.00 0.00 35.77 5.69
2813 3055 4.043200 GGCCAAGCAACGTCTGGC 62.043 66.667 17.86 17.86 44.31 4.85
2821 3063 0.179936 CTTTGGGTTTGGCCAAGCAA 59.820 50.000 30.30 16.37 39.65 3.91
2835 3077 5.302568 ACACAATATGCCATATGGTCTTTGG 59.697 40.000 22.79 15.27 37.57 3.28
2930 3172 2.983192 TGGTGAATACTTTCCAGGTCCA 59.017 45.455 0.00 0.00 0.00 4.02
2984 3226 1.388547 AAGACAAGTTTGCGCCTCAA 58.611 45.000 4.18 0.00 0.00 3.02
3005 3247 1.337703 TGCTCAATGACAACAGGCAAC 59.662 47.619 0.00 0.00 0.00 4.17
3033 3275 6.872547 ACCGAAGAACAAGAAATTAGGAGTAC 59.127 38.462 0.00 0.00 0.00 2.73
3037 3279 8.857694 ATTAACCGAAGAACAAGAAATTAGGA 57.142 30.769 0.00 0.00 0.00 2.94
3057 3299 6.916387 CCAGACATCAATTCTGCATGATTAAC 59.084 38.462 0.00 0.00 39.43 2.01
3064 3306 4.788679 TGATCCAGACATCAATTCTGCAT 58.211 39.130 0.00 0.00 39.43 3.96
3067 3309 5.008712 CACCATGATCCAGACATCAATTCTG 59.991 44.000 0.00 0.00 40.30 3.02
3075 3317 2.573009 TCACACACCATGATCCAGACAT 59.427 45.455 0.00 0.00 0.00 3.06
3099 3343 7.658575 AGAAGTTTTAAGCCGTGTAACTTATCA 59.341 33.333 0.00 0.00 38.69 2.15
3100 3344 8.026341 AGAAGTTTTAAGCCGTGTAACTTATC 57.974 34.615 0.00 0.00 38.69 1.75
3165 3409 8.147704 GGTTGATTTATGAAGTTCCTTTCCAAA 58.852 33.333 0.00 0.00 0.00 3.28
3248 3495 2.478709 GGAACAACGCACAACATGTTGA 60.479 45.455 38.30 0.00 42.93 3.18
3270 3517 3.555168 CCCCTTGCTTGTATAGGTCGATC 60.555 52.174 0.00 0.00 0.00 3.69
3278 3525 2.167693 CGAGTCACCCCTTGCTTGTATA 59.832 50.000 0.00 0.00 0.00 1.47
3311 3559 4.038522 GTCAAGCTATGAGATCAGTAGGCA 59.961 45.833 0.00 0.00 39.19 4.75
3319 3567 8.885494 AGAAACATTAGTCAAGCTATGAGATC 57.115 34.615 0.00 0.00 39.19 2.75
3324 3572 9.552114 CAAGAAAGAAACATTAGTCAAGCTATG 57.448 33.333 0.00 0.00 0.00 2.23
3342 3590 3.864789 ACCTCCAAAGCTCAAGAAAGA 57.135 42.857 0.00 0.00 0.00 2.52
3392 3640 0.390735 TCGCCGAAAAGAACTAGCCC 60.391 55.000 0.00 0.00 0.00 5.19
3393 3641 1.653151 ATCGCCGAAAAGAACTAGCC 58.347 50.000 0.00 0.00 0.00 3.93
3394 3642 2.671396 TGAATCGCCGAAAAGAACTAGC 59.329 45.455 0.00 0.00 0.00 3.42
3395 3643 3.062234 GGTGAATCGCCGAAAAGAACTAG 59.938 47.826 0.00 0.00 0.00 2.57
3396 3644 2.997986 GGTGAATCGCCGAAAAGAACTA 59.002 45.455 0.00 0.00 0.00 2.24
3397 3645 1.804748 GGTGAATCGCCGAAAAGAACT 59.195 47.619 0.00 0.00 0.00 3.01
3398 3646 1.135774 GGGTGAATCGCCGAAAAGAAC 60.136 52.381 6.77 0.00 34.37 3.01
3399 3647 1.161843 GGGTGAATCGCCGAAAAGAA 58.838 50.000 6.77 0.00 34.37 2.52
3400 3648 0.035598 TGGGTGAATCGCCGAAAAGA 59.964 50.000 6.77 0.00 34.37 2.52
3401 3649 0.447801 CTGGGTGAATCGCCGAAAAG 59.552 55.000 6.77 0.00 34.37 2.27
3402 3650 0.035598 TCTGGGTGAATCGCCGAAAA 59.964 50.000 6.77 0.00 34.37 2.29
3403 3651 0.035598 TTCTGGGTGAATCGCCGAAA 59.964 50.000 6.77 0.00 34.37 3.46
3404 3652 0.251916 ATTCTGGGTGAATCGCCGAA 59.748 50.000 6.77 6.22 41.17 4.30
3405 3653 1.904771 ATTCTGGGTGAATCGCCGA 59.095 52.632 6.77 1.62 41.17 5.54
3406 3654 4.540153 ATTCTGGGTGAATCGCCG 57.460 55.556 6.77 0.00 41.17 6.46
3412 3660 2.674754 GGGGCGATTCTGGGTGAA 59.325 61.111 0.00 0.00 39.24 3.18
3413 3661 3.407967 GGGGGCGATTCTGGGTGA 61.408 66.667 0.00 0.00 0.00 4.02
3414 3662 3.406595 GAGGGGGCGATTCTGGGTG 62.407 68.421 0.00 0.00 0.00 4.61
3415 3663 3.090532 GAGGGGGCGATTCTGGGT 61.091 66.667 0.00 0.00 0.00 4.51
3416 3664 3.878667 GGAGGGGGCGATTCTGGG 61.879 72.222 0.00 0.00 0.00 4.45
3417 3665 2.965226 TAGGGAGGGGGCGATTCTGG 62.965 65.000 0.00 0.00 0.00 3.86
3418 3666 1.459539 TAGGGAGGGGGCGATTCTG 60.460 63.158 0.00 0.00 0.00 3.02
3419 3667 1.152226 CTAGGGAGGGGGCGATTCT 60.152 63.158 0.00 0.00 0.00 2.40
3420 3668 2.884980 GCTAGGGAGGGGGCGATTC 61.885 68.421 0.00 0.00 0.00 2.52
3421 3669 2.849646 GCTAGGGAGGGGGCGATT 60.850 66.667 0.00 0.00 0.00 3.34
3422 3670 2.032356 TAAGCTAGGGAGGGGGCGAT 62.032 60.000 0.00 0.00 0.00 4.58
3423 3671 2.032356 ATAAGCTAGGGAGGGGGCGA 62.032 60.000 0.00 0.00 0.00 5.54
3424 3672 1.536662 ATAAGCTAGGGAGGGGGCG 60.537 63.158 0.00 0.00 0.00 6.13
3425 3673 1.202099 GGATAAGCTAGGGAGGGGGC 61.202 65.000 0.00 0.00 0.00 5.80
3426 3674 0.547954 GGGATAAGCTAGGGAGGGGG 60.548 65.000 0.00 0.00 0.00 5.40
3427 3675 0.193574 TGGGATAAGCTAGGGAGGGG 59.806 60.000 0.00 0.00 0.00 4.79
3428 3676 1.150135 TCTGGGATAAGCTAGGGAGGG 59.850 57.143 0.00 0.00 0.00 4.30
3429 3677 2.704190 TCTGGGATAAGCTAGGGAGG 57.296 55.000 0.00 0.00 0.00 4.30
3430 3678 3.194542 CGATTCTGGGATAAGCTAGGGAG 59.805 52.174 0.00 0.00 0.00 4.30
3431 3679 3.165875 CGATTCTGGGATAAGCTAGGGA 58.834 50.000 0.00 0.00 0.00 4.20
3432 3680 2.900546 ACGATTCTGGGATAAGCTAGGG 59.099 50.000 0.00 0.00 0.00 3.53
3433 3681 3.574396 TGACGATTCTGGGATAAGCTAGG 59.426 47.826 0.00 0.00 0.00 3.02
3434 3682 4.279671 AGTGACGATTCTGGGATAAGCTAG 59.720 45.833 0.00 0.00 0.00 3.42
3435 3683 4.215908 AGTGACGATTCTGGGATAAGCTA 58.784 43.478 0.00 0.00 0.00 3.32
3436 3684 3.034635 AGTGACGATTCTGGGATAAGCT 58.965 45.455 0.00 0.00 0.00 3.74
3437 3685 3.385577 GAGTGACGATTCTGGGATAAGC 58.614 50.000 0.00 0.00 0.00 3.09
3438 3686 3.384789 TGGAGTGACGATTCTGGGATAAG 59.615 47.826 0.00 0.00 0.00 1.73
3439 3687 3.371034 TGGAGTGACGATTCTGGGATAA 58.629 45.455 0.00 0.00 0.00 1.75
3440 3688 3.026707 TGGAGTGACGATTCTGGGATA 57.973 47.619 0.00 0.00 0.00 2.59
3441 3689 1.866015 TGGAGTGACGATTCTGGGAT 58.134 50.000 0.00 0.00 0.00 3.85
3442 3690 1.866015 ATGGAGTGACGATTCTGGGA 58.134 50.000 0.00 0.00 0.00 4.37
3443 3691 4.342862 AATATGGAGTGACGATTCTGGG 57.657 45.455 0.00 0.00 0.00 4.45
3444 3692 6.683974 AAAAATATGGAGTGACGATTCTGG 57.316 37.500 0.00 0.00 0.00 3.86
3478 3726 9.310449 CCCAGCTAATTAGACCTTAACTAGATA 57.690 37.037 16.85 0.00 0.00 1.98
3479 3727 8.011290 TCCCAGCTAATTAGACCTTAACTAGAT 58.989 37.037 16.85 0.00 0.00 1.98
3480 3728 7.359849 TCCCAGCTAATTAGACCTTAACTAGA 58.640 38.462 16.85 0.57 0.00 2.43
3481 3729 7.598759 TCCCAGCTAATTAGACCTTAACTAG 57.401 40.000 16.85 0.00 0.00 2.57
3482 3730 8.429641 CAATCCCAGCTAATTAGACCTTAACTA 58.570 37.037 16.85 0.00 0.00 2.24
3483 3731 7.092399 ACAATCCCAGCTAATTAGACCTTAACT 60.092 37.037 16.85 0.00 0.00 2.24
3484 3732 7.054751 ACAATCCCAGCTAATTAGACCTTAAC 58.945 38.462 16.85 0.00 0.00 2.01
3485 3733 7.208064 ACAATCCCAGCTAATTAGACCTTAA 57.792 36.000 16.85 0.00 0.00 1.85
3486 3734 6.824958 ACAATCCCAGCTAATTAGACCTTA 57.175 37.500 16.85 0.00 0.00 2.69
3487 3735 5.717119 ACAATCCCAGCTAATTAGACCTT 57.283 39.130 16.85 0.00 0.00 3.50
3488 3736 6.824958 TTACAATCCCAGCTAATTAGACCT 57.175 37.500 16.85 1.78 0.00 3.85
3489 3737 7.875327 TTTTACAATCCCAGCTAATTAGACC 57.125 36.000 16.85 0.00 0.00 3.85
3514 3762 6.153340 CCAGAATCACCACTCCATATGTTTTT 59.847 38.462 1.24 0.00 0.00 1.94
3515 3763 5.653769 CCAGAATCACCACTCCATATGTTTT 59.346 40.000 1.24 0.00 0.00 2.43
3516 3764 5.195940 CCAGAATCACCACTCCATATGTTT 58.804 41.667 1.24 0.00 0.00 2.83
3517 3765 4.385643 CCCAGAATCACCACTCCATATGTT 60.386 45.833 1.24 0.00 0.00 2.71
3518 3766 3.137176 CCCAGAATCACCACTCCATATGT 59.863 47.826 1.24 0.00 0.00 2.29
3519 3767 3.497405 CCCCAGAATCACCACTCCATATG 60.497 52.174 0.00 0.00 0.00 1.78
3520 3768 2.713167 CCCCAGAATCACCACTCCATAT 59.287 50.000 0.00 0.00 0.00 1.78
3521 3769 2.126882 CCCCAGAATCACCACTCCATA 58.873 52.381 0.00 0.00 0.00 2.74
3522 3770 0.921896 CCCCAGAATCACCACTCCAT 59.078 55.000 0.00 0.00 0.00 3.41
3523 3771 0.178876 TCCCCAGAATCACCACTCCA 60.179 55.000 0.00 0.00 0.00 3.86
3524 3772 0.543749 CTCCCCAGAATCACCACTCC 59.456 60.000 0.00 0.00 0.00 3.85
3525 3773 1.280457 ACTCCCCAGAATCACCACTC 58.720 55.000 0.00 0.00 0.00 3.51
3526 3774 2.642171 TACTCCCCAGAATCACCACT 57.358 50.000 0.00 0.00 0.00 4.00
3527 3775 3.713826 TTTACTCCCCAGAATCACCAC 57.286 47.619 0.00 0.00 0.00 4.16
3528 3776 4.141482 GCTATTTACTCCCCAGAATCACCA 60.141 45.833 0.00 0.00 0.00 4.17
3529 3777 4.141482 TGCTATTTACTCCCCAGAATCACC 60.141 45.833 0.00 0.00 0.00 4.02
3530 3778 5.036117 TGCTATTTACTCCCCAGAATCAC 57.964 43.478 0.00 0.00 0.00 3.06
3531 3779 5.912149 ATGCTATTTACTCCCCAGAATCA 57.088 39.130 0.00 0.00 0.00 2.57
3532 3780 8.568794 GTTTTATGCTATTTACTCCCCAGAATC 58.431 37.037 0.00 0.00 0.00 2.52
3533 3781 8.282256 AGTTTTATGCTATTTACTCCCCAGAAT 58.718 33.333 0.00 0.00 0.00 2.40
3534 3782 7.639378 AGTTTTATGCTATTTACTCCCCAGAA 58.361 34.615 0.00 0.00 0.00 3.02
3535 3783 7.208064 AGTTTTATGCTATTTACTCCCCAGA 57.792 36.000 0.00 0.00 0.00 3.86
3536 3784 8.211629 AGTAGTTTTATGCTATTTACTCCCCAG 58.788 37.037 0.00 0.00 0.00 4.45
3537 3785 8.097791 AGTAGTTTTATGCTATTTACTCCCCA 57.902 34.615 0.00 0.00 0.00 4.96
3538 3786 9.708092 CTAGTAGTTTTATGCTATTTACTCCCC 57.292 37.037 0.00 0.00 0.00 4.81
3553 3801 9.379770 ACCCTAACCTGTAAACTAGTAGTTTTA 57.620 33.333 28.44 18.40 45.38 1.52
3554 3802 8.267620 ACCCTAACCTGTAAACTAGTAGTTTT 57.732 34.615 28.44 14.87 45.38 2.43
3556 3804 7.732140 AGAACCCTAACCTGTAAACTAGTAGTT 59.268 37.037 9.85 9.85 40.80 2.24
3557 3805 7.244558 AGAACCCTAACCTGTAAACTAGTAGT 58.755 38.462 0.00 0.00 0.00 2.73
3558 3806 7.715266 AGAACCCTAACCTGTAAACTAGTAG 57.285 40.000 0.00 0.00 0.00 2.57
3559 3807 9.600432 TTTAGAACCCTAACCTGTAAACTAGTA 57.400 33.333 0.00 0.00 34.80 1.82
3560 3808 8.496534 TTTAGAACCCTAACCTGTAAACTAGT 57.503 34.615 0.00 0.00 34.80 2.57
3561 3809 9.783081 TTTTTAGAACCCTAACCTGTAAACTAG 57.217 33.333 0.00 0.00 34.80 2.57
3591 3839 9.098355 GCTTTCTGAGAAAAATTAAAAAGTGGT 57.902 29.630 9.15 0.00 0.00 4.16
3592 3840 9.317936 AGCTTTCTGAGAAAAATTAAAAAGTGG 57.682 29.630 9.15 0.00 0.00 4.00
3599 3847 9.744468 GTTTGGTAGCTTTCTGAGAAAAATTAA 57.256 29.630 9.15 0.00 0.00 1.40
3600 3848 8.073768 CGTTTGGTAGCTTTCTGAGAAAAATTA 58.926 33.333 9.15 0.00 0.00 1.40
3601 3849 6.918022 CGTTTGGTAGCTTTCTGAGAAAAATT 59.082 34.615 9.15 0.60 0.00 1.82
3602 3850 6.438763 CGTTTGGTAGCTTTCTGAGAAAAAT 58.561 36.000 9.15 3.25 0.00 1.82
3603 3851 5.732247 GCGTTTGGTAGCTTTCTGAGAAAAA 60.732 40.000 9.15 0.00 0.00 1.94
3604 3852 4.261031 GCGTTTGGTAGCTTTCTGAGAAAA 60.261 41.667 9.15 0.00 0.00 2.29
3605 3853 3.250040 GCGTTTGGTAGCTTTCTGAGAAA 59.750 43.478 7.49 7.49 0.00 2.52
3606 3854 2.806244 GCGTTTGGTAGCTTTCTGAGAA 59.194 45.455 0.00 0.00 0.00 2.87
3607 3855 2.413837 GCGTTTGGTAGCTTTCTGAGA 58.586 47.619 0.00 0.00 0.00 3.27
3608 3856 1.126846 CGCGTTTGGTAGCTTTCTGAG 59.873 52.381 0.00 0.00 0.00 3.35
3609 3857 1.144969 CGCGTTTGGTAGCTTTCTGA 58.855 50.000 0.00 0.00 0.00 3.27
3610 3858 0.452784 GCGCGTTTGGTAGCTTTCTG 60.453 55.000 8.43 0.00 0.00 3.02
3611 3859 1.866925 GCGCGTTTGGTAGCTTTCT 59.133 52.632 8.43 0.00 0.00 2.52
3612 3860 1.509162 CGCGCGTTTGGTAGCTTTC 60.509 57.895 24.19 0.00 0.00 2.62
3613 3861 2.554272 CGCGCGTTTGGTAGCTTT 59.446 55.556 24.19 0.00 0.00 3.51
3614 3862 3.419759 CCGCGCGTTTGGTAGCTT 61.420 61.111 29.95 0.00 0.00 3.74
3615 3863 4.675029 ACCGCGCGTTTGGTAGCT 62.675 61.111 29.95 0.00 36.50 3.32
3616 3864 4.143363 GACCGCGCGTTTGGTAGC 62.143 66.667 29.95 4.48 38.99 3.58
3617 3865 3.484547 GGACCGCGCGTTTGGTAG 61.485 66.667 29.95 13.89 38.99 3.18
3629 3877 3.928343 TTTTTGAAACAGCGGACCG 57.072 47.368 10.29 10.29 0.00 4.79
3644 3892 2.059190 ACCGCGGGTTTGGGTTTTT 61.059 52.632 31.76 0.00 27.29 1.94
3645 3893 2.442458 ACCGCGGGTTTGGGTTTT 60.442 55.556 31.76 0.00 27.29 2.43
3646 3894 3.220658 CACCGCGGGTTTGGGTTT 61.221 61.111 31.76 0.57 31.02 3.27
3647 3895 4.192453 TCACCGCGGGTTTGGGTT 62.192 61.111 31.76 1.49 31.02 4.11
3648 3896 4.941309 GTCACCGCGGGTTTGGGT 62.941 66.667 31.76 2.42 31.02 4.51
3649 3897 3.242897 TAGTCACCGCGGGTTTGGG 62.243 63.158 31.76 11.31 31.02 4.12
3650 3898 1.740296 CTAGTCACCGCGGGTTTGG 60.740 63.158 31.76 13.21 31.02 3.28
3651 3899 2.388232 GCTAGTCACCGCGGGTTTG 61.388 63.158 31.76 19.32 31.02 2.93
3652 3900 2.047560 GCTAGTCACCGCGGGTTT 60.048 61.111 31.76 14.33 31.02 3.27
3653 3901 4.430765 CGCTAGTCACCGCGGGTT 62.431 66.667 31.76 13.96 45.17 4.11
3658 3906 1.591619 GGTTAAATCGCTAGTCACCGC 59.408 52.381 0.00 0.00 0.00 5.68
3659 3907 1.850441 CGGTTAAATCGCTAGTCACCG 59.150 52.381 0.00 0.00 39.73 4.94
3660 3908 2.884827 ACGGTTAAATCGCTAGTCACC 58.115 47.619 0.00 0.00 0.00 4.02
3661 3909 4.916099 AAACGGTTAAATCGCTAGTCAC 57.084 40.909 0.00 0.00 0.00 3.67
3662 3910 5.697633 AGAAAAACGGTTAAATCGCTAGTCA 59.302 36.000 0.00 0.00 0.00 3.41
3663 3911 6.013689 CAGAAAAACGGTTAAATCGCTAGTC 58.986 40.000 0.00 0.00 0.00 2.59
3664 3912 5.697633 TCAGAAAAACGGTTAAATCGCTAGT 59.302 36.000 0.00 0.00 0.00 2.57
3665 3913 6.013689 GTCAGAAAAACGGTTAAATCGCTAG 58.986 40.000 0.00 0.00 0.00 3.42
3666 3914 5.388682 CGTCAGAAAAACGGTTAAATCGCTA 60.389 40.000 0.00 0.00 36.51 4.26
3667 3915 4.609783 CGTCAGAAAAACGGTTAAATCGCT 60.610 41.667 0.00 0.00 36.51 4.93
3668 3916 3.596562 CGTCAGAAAAACGGTTAAATCGC 59.403 43.478 0.00 0.00 36.51 4.58
3678 3926 1.401018 GCCCAATCCGTCAGAAAAACG 60.401 52.381 0.00 0.00 39.78 3.60
3679 3927 1.067846 GGCCCAATCCGTCAGAAAAAC 60.068 52.381 0.00 0.00 0.00 2.43
3680 3928 1.253100 GGCCCAATCCGTCAGAAAAA 58.747 50.000 0.00 0.00 0.00 1.94
3681 3929 0.610785 GGGCCCAATCCGTCAGAAAA 60.611 55.000 19.95 0.00 0.00 2.29
3682 3930 1.001393 GGGCCCAATCCGTCAGAAA 60.001 57.895 19.95 0.00 0.00 2.52
3683 3931 2.227757 TGGGCCCAATCCGTCAGAA 61.228 57.895 26.33 0.00 0.00 3.02
3684 3932 2.609299 TGGGCCCAATCCGTCAGA 60.609 61.111 26.33 0.00 0.00 3.27
3685 3933 2.438434 GTGGGCCCAATCCGTCAG 60.438 66.667 30.64 0.00 0.00 3.51
3686 3934 2.611505 ATGTGGGCCCAATCCGTCA 61.612 57.895 30.64 20.29 0.00 4.35
3687 3935 2.120909 CATGTGGGCCCAATCCGTC 61.121 63.158 30.64 14.22 0.00 4.79
3688 3936 2.044053 CATGTGGGCCCAATCCGT 60.044 61.111 30.64 13.66 0.00 4.69
3689 3937 3.530260 GCATGTGGGCCCAATCCG 61.530 66.667 30.64 16.79 0.00 4.18
3699 3947 4.371417 AGGTGGCCTGGCATGTGG 62.371 66.667 22.05 0.00 29.57 4.17
3740 3988 1.449601 AGCTAACGGCCATCAACGG 60.450 57.895 2.24 0.00 43.05 4.44
3741 3989 0.739462 TCAGCTAACGGCCATCAACG 60.739 55.000 2.24 0.00 43.05 4.10
3742 3990 0.727398 GTCAGCTAACGGCCATCAAC 59.273 55.000 2.24 0.00 43.05 3.18
3743 3991 0.739462 CGTCAGCTAACGGCCATCAA 60.739 55.000 0.00 0.00 43.05 2.57
3744 3992 1.153647 CGTCAGCTAACGGCCATCA 60.154 57.895 0.00 0.00 43.05 3.07
3745 3993 2.526120 GCGTCAGCTAACGGCCATC 61.526 63.158 12.22 0.00 42.81 3.51
3746 3994 2.511600 GCGTCAGCTAACGGCCAT 60.512 61.111 12.22 0.00 42.81 4.40
3751 3999 2.879462 GGACCGCGTCAGCTAACG 60.879 66.667 4.61 4.61 45.31 3.18
3752 4000 2.879462 CGGACCGCGTCAGCTAAC 60.879 66.667 4.92 0.00 42.32 2.34
3753 4001 4.124351 CCGGACCGCGTCAGCTAA 62.124 66.667 8.86 0.00 42.32 3.09
3769 4017 1.507174 CGAGAGAGTGGTTCCGACC 59.493 63.158 0.00 0.00 46.71 4.79
3770 4018 1.153997 GCGAGAGAGTGGTTCCGAC 60.154 63.158 0.00 0.00 0.00 4.79
3771 4019 1.303398 AGCGAGAGAGTGGTTCCGA 60.303 57.895 0.00 0.00 0.00 4.55
3772 4020 1.137825 GAGCGAGAGAGTGGTTCCG 59.862 63.158 0.00 0.00 0.00 4.30
3773 4021 1.513622 GGAGCGAGAGAGTGGTTCC 59.486 63.158 0.00 0.00 0.00 3.62
3774 4022 1.513622 GGGAGCGAGAGAGTGGTTC 59.486 63.158 0.00 0.00 0.00 3.62
3775 4023 1.985116 GGGGAGCGAGAGAGTGGTT 60.985 63.158 0.00 0.00 0.00 3.67
3776 4024 2.363147 GGGGAGCGAGAGAGTGGT 60.363 66.667 0.00 0.00 0.00 4.16
3777 4025 3.151022 GGGGGAGCGAGAGAGTGG 61.151 72.222 0.00 0.00 0.00 4.00
3778 4026 2.043450 AGGGGGAGCGAGAGAGTG 60.043 66.667 0.00 0.00 0.00 3.51
3779 4027 2.277404 GAGGGGGAGCGAGAGAGT 59.723 66.667 0.00 0.00 0.00 3.24
3780 4028 2.520741 GGAGGGGGAGCGAGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
3781 4029 3.024356 AGGAGGGGGAGCGAGAGA 61.024 66.667 0.00 0.00 0.00 3.10
3782 4030 2.520741 GAGGAGGGGGAGCGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
3783 4031 3.024356 AGAGGAGGGGGAGCGAGA 61.024 66.667 0.00 0.00 0.00 4.04
3784 4032 2.520741 GAGAGGAGGGGGAGCGAG 60.521 72.222 0.00 0.00 0.00 5.03
3785 4033 4.144727 GGAGAGGAGGGGGAGCGA 62.145 72.222 0.00 0.00 0.00 4.93
3786 4034 4.465446 TGGAGAGGAGGGGGAGCG 62.465 72.222 0.00 0.00 0.00 5.03
3787 4035 2.766229 GTGGAGAGGAGGGGGAGC 60.766 72.222 0.00 0.00 0.00 4.70
3788 4036 2.041405 GGTGGAGAGGAGGGGGAG 60.041 72.222 0.00 0.00 0.00 4.30
3789 4037 2.540910 AGGTGGAGAGGAGGGGGA 60.541 66.667 0.00 0.00 0.00 4.81
3790 4038 2.041405 GAGGTGGAGAGGAGGGGG 60.041 72.222 0.00 0.00 0.00 5.40
3791 4039 2.041405 GGAGGTGGAGAGGAGGGG 60.041 72.222 0.00 0.00 0.00 4.79
3792 4040 1.075600 GAGGAGGTGGAGAGGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
3793 4041 0.106217 GAGAGGAGGTGGAGAGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
3794 4042 3.513209 GAGAGGAGGTGGAGAGGAG 57.487 63.158 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.