Multiple sequence alignment - TraesCS7A01G187900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G187900 chr7A 100.000 8117 0 0 1 8117 143362289 143354173 0.000000e+00 14990.0
1 TraesCS7A01G187900 chr7A 89.744 78 2 1 2772 2843 85209302 85209379 2.410000e-15 95.3
2 TraesCS7A01G187900 chr7A 88.158 76 3 1 2771 2840 271736402 271736477 1.450000e-12 86.1
3 TraesCS7A01G187900 chr7A 84.722 72 8 1 2821 2889 200040374 200040303 1.460000e-07 69.4
4 TraesCS7A01G187900 chr7A 91.489 47 3 1 2723 2768 85209399 85209353 6.800000e-06 63.9
5 TraesCS7A01G187900 chr7A 97.222 36 1 0 2733 2768 85209312 85209347 2.450000e-05 62.1
6 TraesCS7A01G187900 chr7D 92.318 3124 154 42 2771 5854 141360090 141357013 0.000000e+00 4361.0
7 TraesCS7A01G187900 chr7D 92.759 2030 71 30 782 2774 141362028 141360038 0.000000e+00 2865.0
8 TraesCS7A01G187900 chr7D 94.539 1465 42 10 5850 7282 141356948 141355490 0.000000e+00 2228.0
9 TraesCS7A01G187900 chr7D 81.851 562 45 16 7488 8004 141355192 141354643 3.500000e-113 420.0
10 TraesCS7A01G187900 chr7D 94.709 189 9 1 7272 7460 141355466 141355279 7.970000e-75 292.0
11 TraesCS7A01G187900 chr7D 81.564 358 44 12 2909 3255 627019329 627018983 8.020000e-70 276.0
12 TraesCS7A01G187900 chr7D 81.303 353 45 10 2914 3255 624916422 624916764 4.830000e-67 267.0
13 TraesCS7A01G187900 chr7D 80.726 358 50 12 2909 3254 614824597 614824247 2.250000e-65 261.0
14 TraesCS7A01G187900 chr7D 90.667 75 1 1 2771 2839 249422601 249422527 2.410000e-15 95.3
15 TraesCS7A01G187900 chr7D 97.872 47 1 0 2843 2889 141360035 141359989 1.880000e-11 82.4
16 TraesCS7A01G187900 chr7D 94.118 51 3 0 2843 2893 193409898 193409948 2.430000e-10 78.7
17 TraesCS7A01G187900 chr7D 97.222 36 1 0 2733 2768 141360002 141360037 2.450000e-05 62.1
18 TraesCS7A01G187900 chr7B 93.380 2281 72 21 2843 5083 106602288 106600047 0.000000e+00 3302.0
19 TraesCS7A01G187900 chr7B 94.004 1968 78 18 782 2716 106604312 106602352 0.000000e+00 2944.0
20 TraesCS7A01G187900 chr7B 93.370 1840 69 17 5850 7662 106598682 106596869 0.000000e+00 2673.0
21 TraesCS7A01G187900 chr7B 94.981 777 35 3 5080 5855 106599517 106598744 0.000000e+00 1216.0
22 TraesCS7A01G187900 chr7B 89.356 357 31 6 7609 7960 106576361 106576007 7.480000e-120 442.0
23 TraesCS7A01G187900 chr7B 84.541 207 25 7 3627 3830 695498778 695498980 1.790000e-46 198.0
24 TraesCS7A01G187900 chr7B 80.000 245 49 0 39 283 104782658 104782902 1.800000e-41 182.0
25 TraesCS7A01G187900 chr7B 98.630 73 1 0 2733 2805 106602255 106602327 6.610000e-26 130.0
26 TraesCS7A01G187900 chr7B 91.489 47 3 1 2723 2768 33076095 33076049 6.800000e-06 63.9
27 TraesCS7A01G187900 chr5B 91.902 778 56 5 1028 1805 629627382 629626612 0.000000e+00 1081.0
28 TraesCS7A01G187900 chr5B 95.000 60 3 0 973 1032 629656058 629655999 2.410000e-15 95.3
29 TraesCS7A01G187900 chr1D 93.554 543 31 2 1098 1640 277137957 277137419 0.000000e+00 806.0
30 TraesCS7A01G187900 chr1D 96.800 125 3 1 1682 1806 277137423 277137300 2.970000e-49 207.0
31 TraesCS7A01G187900 chr1D 83.898 118 10 6 2772 2887 253525946 253526056 4.010000e-18 104.0
32 TraesCS7A01G187900 chr6D 87.893 636 70 6 1 632 460013052 460012420 0.000000e+00 741.0
33 TraesCS7A01G187900 chr6A 86.635 636 78 6 1 632 605892126 605891494 0.000000e+00 697.0
34 TraesCS7A01G187900 chr6A 95.539 269 12 0 1372 1640 564003142 564003410 1.620000e-116 431.0
35 TraesCS7A01G187900 chr6A 95.968 124 4 1 1682 1805 564003406 564003528 4.970000e-47 200.0
36 TraesCS7A01G187900 chr3A 95.911 269 11 0 1372 1640 23810824 23811092 3.480000e-118 436.0
37 TraesCS7A01G187900 chr3A 96.800 125 2 2 1682 1806 23811088 23811210 2.970000e-49 207.0
38 TraesCS7A01G187900 chr3A 85.507 69 7 3 2845 2910 356085005 356084937 1.460000e-07 69.4
39 TraesCS7A01G187900 chr3A 92.000 50 3 1 2733 2782 621664454 621664502 1.460000e-07 69.4
40 TraesCS7A01G187900 chr3A 100.000 28 0 0 4180 4207 745172398 745172371 1.500000e-02 52.8
41 TraesCS7A01G187900 chr3A 100.000 28 0 0 4180 4207 745173082 745173055 1.500000e-02 52.8
42 TraesCS7A01G187900 chr1A 95.911 269 11 0 1372 1640 491735229 491735497 3.480000e-118 436.0
43 TraesCS7A01G187900 chr1A 96.774 124 3 1 1683 1806 491735494 491735616 1.070000e-48 206.0
44 TraesCS7A01G187900 chr3D 80.148 539 90 14 6 534 181659253 181658722 3.550000e-103 387.0
45 TraesCS7A01G187900 chr3D 83.886 211 27 7 3627 3832 600494183 600494391 2.310000e-45 195.0
46 TraesCS7A01G187900 chr3D 85.714 84 3 5 2761 2843 131489159 131489234 6.750000e-11 80.5
47 TraesCS7A01G187900 chr6B 79.952 414 66 12 1005 1409 173019949 173020354 1.030000e-73 289.0
48 TraesCS7A01G187900 chr6B 81.844 358 40 15 2909 3255 43153770 43154113 2.230000e-70 278.0
49 TraesCS7A01G187900 chr6B 88.608 79 3 1 2771 2843 530560463 530560385 3.120000e-14 91.6
50 TraesCS7A01G187900 chr6B 93.023 43 1 1 2733 2775 530560452 530560412 2.450000e-05 62.1
51 TraesCS7A01G187900 chr4D 81.667 360 45 14 2909 3255 404059570 404059921 6.200000e-71 279.0
52 TraesCS7A01G187900 chr2B 81.667 360 44 14 2909 3254 164897931 164898282 6.200000e-71 279.0
53 TraesCS7A01G187900 chr2B 84.314 204 26 6 3630 3830 635210561 635210361 2.310000e-45 195.0
54 TraesCS7A01G187900 chr2B 76.703 279 63 2 8 285 740555104 740554827 3.920000e-33 154.0
55 TraesCS7A01G187900 chr5A 81.148 366 42 15 2909 3255 619465203 619464846 1.340000e-67 268.0
56 TraesCS7A01G187900 chr5A 83.491 212 28 6 3622 3830 619464596 619464389 2.990000e-44 191.0
57 TraesCS7A01G187900 chr5A 92.593 54 1 2 2841 2894 594959674 594959624 3.140000e-09 75.0
58 TraesCS7A01G187900 chr1B 85.930 199 24 4 3630 3826 187366474 187366670 8.250000e-50 209.0
59 TraesCS7A01G187900 chr1B 83.065 124 9 6 2771 2887 150361103 150361221 1.440000e-17 102.0
60 TraesCS7A01G187900 chr1B 78.740 127 21 4 2772 2895 295297452 295297575 6.750000e-11 80.5
61 TraesCS7A01G187900 chr4A 86.528 193 21 5 3631 3821 701631196 701631385 2.970000e-49 207.0
62 TraesCS7A01G187900 chr4A 77.291 251 48 8 100 346 741081234 741080989 1.100000e-28 139.0
63 TraesCS7A01G187900 chr4A 91.304 46 3 1 2723 2767 667788143 667788188 2.450000e-05 62.1
64 TraesCS7A01G187900 chr2D 85.024 207 25 5 3630 3832 462258332 462258128 1.070000e-48 206.0
65 TraesCS7A01G187900 chr2A 76.817 289 65 2 75 362 516130649 516130362 2.340000e-35 161.0
66 TraesCS7A01G187900 chr5D 88.889 72 3 2 2772 2843 530069292 530069358 5.220000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G187900 chr7A 143354173 143362289 8116 True 14990.000000 14990 100.000000 1 8117 1 chr7A.!!$R2 8116
1 TraesCS7A01G187900 chr7D 141354643 141362028 7385 True 1708.066667 4361 92.341333 782 8004 6 chr7D.!!$R4 7222
2 TraesCS7A01G187900 chr7B 106596869 106604312 7443 True 2533.750000 3302 93.933750 782 7662 4 chr7B.!!$R3 6880
3 TraesCS7A01G187900 chr5B 629626612 629627382 770 True 1081.000000 1081 91.902000 1028 1805 1 chr5B.!!$R1 777
4 TraesCS7A01G187900 chr1D 277137300 277137957 657 True 506.500000 806 95.177000 1098 1806 2 chr1D.!!$R1 708
5 TraesCS7A01G187900 chr6D 460012420 460013052 632 True 741.000000 741 87.893000 1 632 1 chr6D.!!$R1 631
6 TraesCS7A01G187900 chr6A 605891494 605892126 632 True 697.000000 697 86.635000 1 632 1 chr6A.!!$R1 631
7 TraesCS7A01G187900 chr3D 181658722 181659253 531 True 387.000000 387 80.148000 6 534 1 chr3D.!!$R1 528
8 TraesCS7A01G187900 chr5A 619464389 619465203 814 True 229.500000 268 82.319500 2909 3830 2 chr5A.!!$R2 921

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
804 809 0.034896 CGTTACTGTTCTGGCCCAGT 59.965 55.000 11.27 15.49 43.90 4.00 F
862 874 0.321653 CGGCTCAACCTAGTGGCTTT 60.322 55.000 0.00 0.00 36.63 3.51 F
976 993 1.140652 CATCCCTCCTTCTCCTTGAGC 59.859 57.143 0.00 0.00 0.00 4.26 F
2782 2826 0.038744 ACTTTCCGTACTCCCTCCGA 59.961 55.000 0.00 0.00 0.00 4.55 F
3535 3666 0.112995 TCAAGCCCAGCTGACCAATT 59.887 50.000 17.39 0.00 39.62 2.32 F
4545 4742 0.304705 CGCACCTGTTCAGTGTTCAC 59.695 55.000 0.00 0.00 37.56 3.18 F
5796 6532 0.036164 TGGCTGTATGCACCGTTCTT 59.964 50.000 0.00 0.00 45.15 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2083 2104 0.465460 TGCCACACCCTTGTTCAGAC 60.465 55.000 0.00 0.00 31.66 3.51 R
2405 2445 1.908619 TCTGTGGACATAGTGCATGGT 59.091 47.619 0.00 0.00 39.13 3.55 R
2907 3000 2.670251 CAACGCACGGGCCCTTTA 60.670 61.111 22.43 0.00 36.38 1.85 R
3832 4015 1.734465 GACAATCAACAAGCCTCCTCG 59.266 52.381 0.00 0.00 0.00 4.63 R
5338 6070 0.037975 GCCTGGTGTTTTGATGCCTG 60.038 55.000 0.00 0.00 0.00 4.85 R
6258 7065 1.153353 AGAATGGCAACGTAACACCG 58.847 50.000 0.00 0.00 42.51 4.94 R
7744 8705 0.109781 CCAGGACAAATTTGGCGTCG 60.110 55.000 21.74 9.92 36.95 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 5.374921 CATATCTCCAGCTTGTCCAGATTT 58.625 41.667 0.00 0.00 0.00 2.17
34 35 5.441718 TCTCCAGCTTGTCCAGATTTATT 57.558 39.130 0.00 0.00 0.00 1.40
46 47 4.394920 TCCAGATTTATTGTTGACGGCTTC 59.605 41.667 0.00 0.00 0.00 3.86
64 65 3.678806 GCTTCGTGAACCCATCATACTCA 60.679 47.826 0.00 0.00 40.97 3.41
70 71 3.243873 TGAACCCATCATACTCAGCGATC 60.244 47.826 0.00 0.00 31.50 3.69
85 86 1.819632 GATCACCACCGCATCACCC 60.820 63.158 0.00 0.00 0.00 4.61
88 89 2.285069 ACCACCGCATCACCCCTA 60.285 61.111 0.00 0.00 0.00 3.53
100 101 2.833121 CCCCTAAACGCCCATGGC 60.833 66.667 6.09 0.58 46.75 4.40
127 128 0.451783 GCATCACACGTTCCCAATCC 59.548 55.000 0.00 0.00 0.00 3.01
130 131 1.131303 TCACACGTTCCCAATCCCCT 61.131 55.000 0.00 0.00 0.00 4.79
136 137 1.763968 GTTCCCAATCCCCTAAGCAC 58.236 55.000 0.00 0.00 0.00 4.40
169 170 3.325135 GGGTGTATAGATTGTCCTCCAGG 59.675 52.174 0.00 0.00 0.00 4.45
184 185 1.553690 CCAGGGGACGGATGTTCACT 61.554 60.000 0.00 0.00 38.11 3.41
247 248 8.388656 AGAACCAGAATTGACTATAGGGTTTA 57.611 34.615 4.43 0.00 37.50 2.01
265 266 4.035208 GGTTTATCATTGTGAACCCTAGCG 59.965 45.833 0.00 0.00 36.41 4.26
268 269 3.179443 TCATTGTGAACCCTAGCGATC 57.821 47.619 0.00 0.00 0.00 3.69
325 326 4.289245 TCTGATCTACCACCACATCATCA 58.711 43.478 0.00 0.00 0.00 3.07
337 338 2.502947 CACATCATCAAGGTCCTCCTCA 59.497 50.000 0.00 0.00 44.35 3.86
343 344 0.823460 CAAGGTCCTCCTCAGAGAGC 59.177 60.000 0.00 0.00 44.35 4.09
349 350 1.621672 CCTCCTCAGAGAGCCCCAAC 61.622 65.000 0.00 0.00 43.39 3.77
373 375 0.600057 TCATCATCGCCTCCAGATCG 59.400 55.000 0.00 0.00 0.00 3.69
379 381 1.227089 CGCCTCCAGATCGTCTTGG 60.227 63.158 0.00 0.00 0.00 3.61
380 382 1.144936 GCCTCCAGATCGTCTTGGG 59.855 63.158 0.00 0.00 0.00 4.12
381 383 1.330655 GCCTCCAGATCGTCTTGGGA 61.331 60.000 0.00 0.00 0.00 4.37
385 387 1.227089 CAGATCGTCTTGGGAGCCG 60.227 63.158 0.00 0.00 0.00 5.52
460 464 4.735358 GGCCCTGTTCCGAACCCC 62.735 72.222 8.80 1.04 0.00 4.95
475 479 3.407967 CCCAGCCGCCCCTCTAAA 61.408 66.667 0.00 0.00 0.00 1.85
477 481 2.124695 CAGCCGCCCCTCTAAACC 60.125 66.667 0.00 0.00 0.00 3.27
479 483 4.851179 GCCGCCCCTCTAAACCGG 62.851 72.222 0.00 0.00 41.72 5.28
480 484 3.396570 CCGCCCCTCTAAACCGGT 61.397 66.667 0.00 0.00 34.56 5.28
484 488 0.614812 GCCCCTCTAAACCGGTAACA 59.385 55.000 8.00 0.00 0.00 2.41
485 489 1.003464 GCCCCTCTAAACCGGTAACAA 59.997 52.381 8.00 0.00 0.00 2.83
487 491 2.616256 CCCCTCTAAACCGGTAACAACC 60.616 54.545 8.00 0.00 0.00 3.77
490 494 1.691434 TCTAAACCGGTAACAACCCGT 59.309 47.619 8.00 0.00 43.98 5.28
538 542 0.953003 CCCCTTAGTCGATCCGAGAC 59.047 60.000 0.00 0.00 36.23 3.36
541 546 2.562635 CCTTAGTCGATCCGAGACAGA 58.437 52.381 0.00 0.00 40.84 3.41
553 558 1.065401 CGAGACAGAGAGATCACCAGC 59.935 57.143 0.00 0.00 0.00 4.85
554 559 2.378038 GAGACAGAGAGATCACCAGCT 58.622 52.381 0.00 0.00 0.00 4.24
576 581 1.596496 GATGGGGGAGGGAAGAGAAA 58.404 55.000 0.00 0.00 0.00 2.52
577 582 2.139382 GATGGGGGAGGGAAGAGAAAT 58.861 52.381 0.00 0.00 0.00 2.17
578 583 1.596496 TGGGGGAGGGAAGAGAAATC 58.404 55.000 0.00 0.00 0.00 2.17
579 584 1.082879 TGGGGGAGGGAAGAGAAATCT 59.917 52.381 0.00 0.00 0.00 2.40
580 585 1.771854 GGGGGAGGGAAGAGAAATCTC 59.228 57.143 2.10 2.10 43.17 2.75
582 587 2.846827 GGGGAGGGAAGAGAAATCTCAA 59.153 50.000 12.65 0.00 45.21 3.02
583 588 3.371059 GGGGAGGGAAGAGAAATCTCAAC 60.371 52.174 12.65 5.92 45.21 3.18
584 589 3.526534 GGAGGGAAGAGAAATCTCAACG 58.473 50.000 12.65 0.00 45.21 4.10
586 591 2.010497 GGGAAGAGAAATCTCAACGCC 58.990 52.381 12.65 7.52 45.21 5.68
588 593 1.661112 GAAGAGAAATCTCAACGCCGG 59.339 52.381 12.65 0.00 45.21 6.13
589 594 0.741221 AGAGAAATCTCAACGCCGGC 60.741 55.000 19.07 19.07 45.21 6.13
590 595 1.706287 GAGAAATCTCAACGCCGGCC 61.706 60.000 23.46 2.84 42.42 6.13
595 600 1.327690 ATCTCAACGCCGGCCTAGAA 61.328 55.000 23.46 2.23 0.00 2.10
623 628 2.357361 CGAGAGGAGAGGAACCCTAACT 60.357 54.545 0.00 0.00 31.76 2.24
638 643 3.983821 CCTAACTAGAGGGAAGAGGTGT 58.016 50.000 0.00 0.00 32.39 4.16
639 644 3.702045 CCTAACTAGAGGGAAGAGGTGTG 59.298 52.174 0.00 0.00 32.39 3.82
640 645 3.261818 AACTAGAGGGAAGAGGTGTGT 57.738 47.619 0.00 0.00 0.00 3.72
641 646 2.810164 ACTAGAGGGAAGAGGTGTGTC 58.190 52.381 0.00 0.00 0.00 3.67
642 647 2.104170 CTAGAGGGAAGAGGTGTGTCC 58.896 57.143 0.00 0.00 0.00 4.02
643 648 0.191064 AGAGGGAAGAGGTGTGTCCA 59.809 55.000 0.00 0.00 39.02 4.02
644 649 1.056660 GAGGGAAGAGGTGTGTCCAA 58.943 55.000 0.00 0.00 39.02 3.53
645 650 1.420138 GAGGGAAGAGGTGTGTCCAAA 59.580 52.381 0.00 0.00 39.02 3.28
646 651 1.143073 AGGGAAGAGGTGTGTCCAAAC 59.857 52.381 0.00 0.00 39.02 2.93
647 652 1.143073 GGGAAGAGGTGTGTCCAAACT 59.857 52.381 0.00 0.00 39.02 2.66
648 653 2.495084 GGAAGAGGTGTGTCCAAACTC 58.505 52.381 0.00 0.00 39.02 3.01
649 654 2.158813 GGAAGAGGTGTGTCCAAACTCA 60.159 50.000 0.00 0.00 39.02 3.41
650 655 3.541632 GAAGAGGTGTGTCCAAACTCAA 58.458 45.455 0.00 0.00 39.02 3.02
651 656 3.864789 AGAGGTGTGTCCAAACTCAAT 57.135 42.857 0.00 0.00 39.02 2.57
652 657 4.170468 AGAGGTGTGTCCAAACTCAATT 57.830 40.909 0.00 0.00 39.02 2.32
653 658 4.137543 AGAGGTGTGTCCAAACTCAATTC 58.862 43.478 0.00 0.00 39.02 2.17
654 659 4.137543 GAGGTGTGTCCAAACTCAATTCT 58.862 43.478 0.00 0.00 39.02 2.40
655 660 4.137543 AGGTGTGTCCAAACTCAATTCTC 58.862 43.478 0.00 0.00 39.02 2.87
656 661 3.058914 GGTGTGTCCAAACTCAATTCTCG 60.059 47.826 0.00 0.00 35.97 4.04
657 662 3.560068 GTGTGTCCAAACTCAATTCTCGT 59.440 43.478 0.00 0.00 31.18 4.18
658 663 4.035208 GTGTGTCCAAACTCAATTCTCGTT 59.965 41.667 0.00 0.00 31.18 3.85
659 664 4.035091 TGTGTCCAAACTCAATTCTCGTTG 59.965 41.667 0.00 0.00 0.00 4.10
660 665 3.563808 TGTCCAAACTCAATTCTCGTTGG 59.436 43.478 0.00 0.00 0.00 3.77
661 666 2.552315 TCCAAACTCAATTCTCGTTGGC 59.448 45.455 0.00 0.00 0.00 4.52
662 667 2.574322 CAAACTCAATTCTCGTTGGCG 58.426 47.619 0.00 0.00 39.92 5.69
663 668 1.878953 AACTCAATTCTCGTTGGCGT 58.121 45.000 0.00 0.00 39.49 5.68
664 669 2.736144 ACTCAATTCTCGTTGGCGTA 57.264 45.000 0.00 0.00 39.49 4.42
665 670 2.607187 ACTCAATTCTCGTTGGCGTAG 58.393 47.619 0.00 0.00 39.49 3.51
696 701 4.067192 TGATATGCAAATCAGATGACCCG 58.933 43.478 0.00 0.00 32.18 5.28
697 702 1.027357 ATGCAAATCAGATGACCCGC 58.973 50.000 0.00 0.00 0.00 6.13
698 703 1.031571 TGCAAATCAGATGACCCGCC 61.032 55.000 0.00 0.00 0.00 6.13
699 704 0.749454 GCAAATCAGATGACCCGCCT 60.749 55.000 0.00 0.00 0.00 5.52
700 705 1.303309 CAAATCAGATGACCCGCCTC 58.697 55.000 0.00 0.00 0.00 4.70
701 706 0.911769 AAATCAGATGACCCGCCTCA 59.088 50.000 0.00 0.00 0.00 3.86
702 707 1.135094 AATCAGATGACCCGCCTCAT 58.865 50.000 0.00 0.00 33.32 2.90
703 708 0.683973 ATCAGATGACCCGCCTCATC 59.316 55.000 10.95 10.95 44.87 2.92
732 737 2.870372 GCGCGATCAGCCAAAACT 59.130 55.556 12.10 0.00 44.76 2.66
733 738 1.210155 GCGCGATCAGCCAAAACTT 59.790 52.632 12.10 0.00 44.76 2.66
734 739 0.387239 GCGCGATCAGCCAAAACTTT 60.387 50.000 12.10 0.00 44.76 2.66
735 740 1.330306 CGCGATCAGCCAAAACTTTG 58.670 50.000 0.00 0.00 44.76 2.77
743 748 2.355718 CAAAACTTTGGGCCGGCG 60.356 61.111 22.54 8.77 34.59 6.46
744 749 4.293648 AAAACTTTGGGCCGGCGC 62.294 61.111 34.64 34.64 0.00 6.53
761 766 2.278857 CGCCTGCGCCTAGTACTG 60.279 66.667 4.18 0.00 0.00 2.74
762 767 2.586357 GCCTGCGCCTAGTACTGC 60.586 66.667 4.18 0.18 0.00 4.40
763 768 2.107141 CCTGCGCCTAGTACTGCC 59.893 66.667 4.18 0.00 0.00 4.85
764 769 2.107141 CTGCGCCTAGTACTGCCC 59.893 66.667 4.18 0.00 0.00 5.36
765 770 2.682136 TGCGCCTAGTACTGCCCA 60.682 61.111 4.18 0.00 0.00 5.36
766 771 2.238847 CTGCGCCTAGTACTGCCCAA 62.239 60.000 4.18 0.00 0.00 4.12
767 772 1.146263 GCGCCTAGTACTGCCCAAT 59.854 57.895 5.39 0.00 0.00 3.16
768 773 0.391597 GCGCCTAGTACTGCCCAATA 59.608 55.000 5.39 0.00 0.00 1.90
769 774 1.605712 GCGCCTAGTACTGCCCAATAG 60.606 57.143 5.39 0.00 0.00 1.73
770 775 1.687123 CGCCTAGTACTGCCCAATAGT 59.313 52.381 5.39 0.00 0.00 2.12
771 776 2.288273 CGCCTAGTACTGCCCAATAGTC 60.288 54.545 5.39 0.00 0.00 2.59
772 777 2.966516 GCCTAGTACTGCCCAATAGTCT 59.033 50.000 5.39 0.00 0.00 3.24
773 778 3.388350 GCCTAGTACTGCCCAATAGTCTT 59.612 47.826 5.39 0.00 0.00 3.01
774 779 4.141688 GCCTAGTACTGCCCAATAGTCTTT 60.142 45.833 5.39 0.00 0.00 2.52
775 780 5.629366 GCCTAGTACTGCCCAATAGTCTTTT 60.629 44.000 5.39 0.00 0.00 2.27
776 781 6.415573 CCTAGTACTGCCCAATAGTCTTTTT 58.584 40.000 5.39 0.00 0.00 1.94
804 809 0.034896 CGTTACTGTTCTGGCCCAGT 59.965 55.000 11.27 15.49 43.90 4.00
838 850 3.496331 CCCAGTTTGGTTCCATGTTACT 58.504 45.455 0.00 0.00 35.17 2.24
860 872 2.660064 CCGGCTCAACCTAGTGGCT 61.660 63.158 0.00 0.00 36.63 4.75
861 873 1.296715 CGGCTCAACCTAGTGGCTT 59.703 57.895 0.00 0.00 36.63 4.35
862 874 0.321653 CGGCTCAACCTAGTGGCTTT 60.322 55.000 0.00 0.00 36.63 3.51
863 875 1.454201 GGCTCAACCTAGTGGCTTTC 58.546 55.000 0.00 0.00 36.63 2.62
864 876 1.454201 GCTCAACCTAGTGGCTTTCC 58.546 55.000 0.00 0.00 36.63 3.13
865 877 1.271379 GCTCAACCTAGTGGCTTTCCA 60.271 52.381 0.00 0.00 40.85 3.53
976 993 1.140652 CATCCCTCCTTCTCCTTGAGC 59.859 57.143 0.00 0.00 0.00 4.26
1276 1294 2.124860 GGGCATGGTACCACGGAC 60.125 66.667 19.09 14.95 0.00 4.79
1443 1461 3.266772 TGTGTTCCTGCTGGATAATCCTT 59.733 43.478 13.72 0.00 42.81 3.36
1505 1523 4.065088 GTGCCTATGAATGAATTAGCGGA 58.935 43.478 0.00 0.00 0.00 5.54
1541 1559 5.185454 TCGATGAATGGATAAGTGCAGTTT 58.815 37.500 12.95 0.00 0.00 2.66
1608 1626 1.559682 GTGTTGGATTAGAGCTGGGGA 59.440 52.381 0.00 0.00 0.00 4.81
1922 1940 8.856103 TGGCTTAAAGCTTGAGTTTTAAACTAT 58.144 29.630 10.57 0.00 40.92 2.12
1993 2012 7.476540 TCTTTATAGCATATACATGGACCGT 57.523 36.000 0.00 0.00 32.36 4.83
2069 2090 6.238759 GGATCCTGGCACATGTTATTTACTTC 60.239 42.308 3.84 0.00 38.20 3.01
2083 2104 7.065324 TGTTATTTACTTCTGAATACTTGGCCG 59.935 37.037 0.00 0.00 0.00 6.13
2266 2288 4.259356 GGCGGTTGGAGATAAACTTTAGT 58.741 43.478 0.00 0.00 0.00 2.24
2359 2381 1.267261 CCGTGTGAACGCCCAAAATTA 59.733 47.619 0.00 0.00 0.00 1.40
2360 2382 2.094957 CCGTGTGAACGCCCAAAATTAT 60.095 45.455 0.00 0.00 0.00 1.28
2363 2385 3.122780 GTGTGAACGCCCAAAATTATTGC 59.877 43.478 0.00 0.00 0.00 3.56
2371 2393 3.368948 GCCCAAAATTATTGCGAAAGGGA 60.369 43.478 0.00 0.00 35.81 4.20
2372 2394 4.683129 GCCCAAAATTATTGCGAAAGGGAT 60.683 41.667 0.00 0.00 35.81 3.85
2373 2395 5.452636 GCCCAAAATTATTGCGAAAGGGATA 60.453 40.000 0.00 0.00 35.81 2.59
2374 2396 6.741240 GCCCAAAATTATTGCGAAAGGGATAT 60.741 38.462 0.00 0.00 35.81 1.63
2375 2397 6.868339 CCCAAAATTATTGCGAAAGGGATATC 59.132 38.462 0.00 0.00 35.81 1.63
2376 2398 6.868339 CCAAAATTATTGCGAAAGGGATATCC 59.132 38.462 13.87 13.87 0.00 2.59
2405 2445 8.084073 GCAATAGAATCTGCAAGGCAAATAATA 58.916 33.333 0.00 0.00 38.41 0.98
2420 2460 6.381801 GCAAATAATACCATGCACTATGTCC 58.618 40.000 0.00 0.00 38.63 4.02
2518 2558 7.859325 TTGCTGGAAATATTACTTACCTGTC 57.141 36.000 0.00 0.00 0.00 3.51
2643 2686 2.562738 GCTAAGCAAGGGTTTGACCAAT 59.437 45.455 0.00 0.00 41.02 3.16
2731 2774 8.732746 AACTACTCATTGTGTTGTACTCTTTT 57.267 30.769 6.42 0.00 0.00 2.27
2774 2818 6.073385 GCTGCTTTAGTAAAACTTTCCGTACT 60.073 38.462 0.00 0.00 0.00 2.73
2775 2819 7.412137 TGCTTTAGTAAAACTTTCCGTACTC 57.588 36.000 0.00 0.00 0.00 2.59
2776 2820 6.424812 TGCTTTAGTAAAACTTTCCGTACTCC 59.575 38.462 0.00 0.00 0.00 3.85
2777 2821 6.128445 GCTTTAGTAAAACTTTCCGTACTCCC 60.128 42.308 0.00 0.00 0.00 4.30
2778 2822 6.670695 TTAGTAAAACTTTCCGTACTCCCT 57.329 37.500 0.00 0.00 0.00 4.20
2779 2823 5.144692 AGTAAAACTTTCCGTACTCCCTC 57.855 43.478 0.00 0.00 0.00 4.30
2780 2824 3.413846 AAAACTTTCCGTACTCCCTCC 57.586 47.619 0.00 0.00 0.00 4.30
2781 2825 0.893447 AACTTTCCGTACTCCCTCCG 59.107 55.000 0.00 0.00 0.00 4.63
2782 2826 0.038744 ACTTTCCGTACTCCCTCCGA 59.961 55.000 0.00 0.00 0.00 4.55
2783 2827 1.341778 ACTTTCCGTACTCCCTCCGAT 60.342 52.381 0.00 0.00 0.00 4.18
2784 2828 1.337387 CTTTCCGTACTCCCTCCGATC 59.663 57.143 0.00 0.00 0.00 3.69
2785 2829 0.466922 TTCCGTACTCCCTCCGATCC 60.467 60.000 0.00 0.00 0.00 3.36
2786 2830 1.152819 CCGTACTCCCTCCGATCCA 60.153 63.158 0.00 0.00 0.00 3.41
2787 2831 0.539901 CCGTACTCCCTCCGATCCAT 60.540 60.000 0.00 0.00 0.00 3.41
2788 2832 1.271762 CCGTACTCCCTCCGATCCATA 60.272 57.143 0.00 0.00 0.00 2.74
2789 2833 2.620886 CCGTACTCCCTCCGATCCATAT 60.621 54.545 0.00 0.00 0.00 1.78
2790 2834 3.090037 CGTACTCCCTCCGATCCATATT 58.910 50.000 0.00 0.00 0.00 1.28
2791 2835 4.267536 CGTACTCCCTCCGATCCATATTA 58.732 47.826 0.00 0.00 0.00 0.98
2792 2836 4.703575 CGTACTCCCTCCGATCCATATTAA 59.296 45.833 0.00 0.00 0.00 1.40
2793 2837 5.360144 CGTACTCCCTCCGATCCATATTAAT 59.640 44.000 0.00 0.00 0.00 1.40
2794 2838 6.127423 CGTACTCCCTCCGATCCATATTAATT 60.127 42.308 0.00 0.00 0.00 1.40
2795 2839 6.054860 ACTCCCTCCGATCCATATTAATTG 57.945 41.667 0.00 0.00 0.00 2.32
2796 2840 5.548056 ACTCCCTCCGATCCATATTAATTGT 59.452 40.000 0.00 0.00 0.00 2.71
2797 2841 6.049955 TCCCTCCGATCCATATTAATTGTC 57.950 41.667 0.00 0.00 0.00 3.18
2798 2842 4.870426 CCCTCCGATCCATATTAATTGTCG 59.130 45.833 0.00 0.00 0.00 4.35
2799 2843 4.330074 CCTCCGATCCATATTAATTGTCGC 59.670 45.833 0.00 0.00 0.00 5.19
2800 2844 5.147330 TCCGATCCATATTAATTGTCGCT 57.853 39.130 0.00 0.00 0.00 4.93
2801 2845 4.929211 TCCGATCCATATTAATTGTCGCTG 59.071 41.667 0.00 0.00 0.00 5.18
2802 2846 4.436050 CCGATCCATATTAATTGTCGCTGC 60.436 45.833 0.00 0.00 0.00 5.25
2803 2847 4.389992 CGATCCATATTAATTGTCGCTGCT 59.610 41.667 0.00 0.00 0.00 4.24
2804 2848 5.106948 CGATCCATATTAATTGTCGCTGCTT 60.107 40.000 0.00 0.00 0.00 3.91
2805 2849 6.090763 CGATCCATATTAATTGTCGCTGCTTA 59.909 38.462 0.00 0.00 0.00 3.09
2806 2850 7.360017 CGATCCATATTAATTGTCGCTGCTTAA 60.360 37.037 0.00 0.00 0.00 1.85
2807 2851 6.954944 TCCATATTAATTGTCGCTGCTTAAC 58.045 36.000 0.00 0.00 0.00 2.01
2808 2852 6.765989 TCCATATTAATTGTCGCTGCTTAACT 59.234 34.615 0.00 0.00 0.00 2.24
2809 2853 7.282224 TCCATATTAATTGTCGCTGCTTAACTT 59.718 33.333 0.00 0.00 0.00 2.66
2810 2854 7.915397 CCATATTAATTGTCGCTGCTTAACTTT 59.085 33.333 0.00 0.00 0.00 2.66
2811 2855 9.929722 CATATTAATTGTCGCTGCTTAACTTTA 57.070 29.630 0.00 0.00 0.00 1.85
2814 2858 9.931210 ATTAATTGTCGCTGCTTAACTTTATAC 57.069 29.630 0.00 0.00 0.00 1.47
2815 2859 7.611213 AATTGTCGCTGCTTAACTTTATACT 57.389 32.000 0.00 0.00 0.00 2.12
2816 2860 8.712285 AATTGTCGCTGCTTAACTTTATACTA 57.288 30.769 0.00 0.00 0.00 1.82
2817 2861 8.712285 ATTGTCGCTGCTTAACTTTATACTAA 57.288 30.769 0.00 0.00 0.00 2.24
2818 2862 8.537049 TTGTCGCTGCTTAACTTTATACTAAA 57.463 30.769 0.00 0.00 0.00 1.85
2819 2863 8.181487 TGTCGCTGCTTAACTTTATACTAAAG 57.819 34.615 0.00 5.34 0.00 1.85
2820 2864 7.816031 TGTCGCTGCTTAACTTTATACTAAAGT 59.184 33.333 6.49 6.49 41.82 2.66
2822 2866 8.653338 TCGCTGCTTAACTTTATACTAAAGTTG 58.347 33.333 24.74 15.31 46.41 3.16
2823 2867 8.440833 CGCTGCTTAACTTTATACTAAAGTTGT 58.559 33.333 24.74 10.49 46.41 3.32
2835 2879 5.840940 ACTAAAGTTGTACTAAAGCAGCG 57.159 39.130 0.00 0.00 0.00 5.18
2836 2880 5.535333 ACTAAAGTTGTACTAAAGCAGCGA 58.465 37.500 0.00 0.00 0.00 4.93
2837 2881 4.727235 AAAGTTGTACTAAAGCAGCGAC 57.273 40.909 0.00 0.00 0.00 5.19
2838 2882 3.380479 AGTTGTACTAAAGCAGCGACA 57.620 42.857 0.00 0.00 0.00 4.35
2839 2883 3.724374 AGTTGTACTAAAGCAGCGACAA 58.276 40.909 0.00 0.00 33.29 3.18
2840 2884 4.315803 AGTTGTACTAAAGCAGCGACAAT 58.684 39.130 0.00 0.00 36.39 2.71
2841 2885 4.755123 AGTTGTACTAAAGCAGCGACAATT 59.245 37.500 0.00 0.00 36.39 2.32
3064 3173 2.158219 TCCACAGGTCCAGGTCTTCTAA 60.158 50.000 0.00 0.00 0.00 2.10
3100 3213 9.599322 GCTTGCATGTAGATTTAATATGTACAC 57.401 33.333 0.00 0.00 31.89 2.90
3113 3226 2.443887 TGTACACAGAAACGGGCTAC 57.556 50.000 0.00 0.00 0.00 3.58
3115 3228 2.366266 TGTACACAGAAACGGGCTACTT 59.634 45.455 0.00 0.00 0.00 2.24
3141 3254 7.885009 TCATCCATTTATTCATGTCATGTGT 57.115 32.000 12.54 5.51 0.00 3.72
3244 3371 2.489329 CGGTTTCCAGTTCAAGCATCAT 59.511 45.455 0.00 0.00 0.00 2.45
3269 3396 1.533625 TAGGGCATGTTCAACAGCAC 58.466 50.000 12.24 9.40 0.00 4.40
3286 3413 3.080121 CTCCCGCTCCTGGCTTCT 61.080 66.667 0.00 0.00 39.13 2.85
3309 3436 0.534412 CCACGACCTCAAGCTCATCT 59.466 55.000 0.00 0.00 0.00 2.90
3336 3463 2.344203 CCGTCCTGAGCTCGTCCTT 61.344 63.158 9.64 0.00 0.00 3.36
3356 3486 1.202371 TGCTTCACTCTGACGAACGTT 60.202 47.619 0.00 0.00 0.00 3.99
3365 3495 2.049433 ACGAACGTTGCTCCGGAG 60.049 61.111 27.83 27.83 0.00 4.63
3448 3578 1.074248 CCACCCCTTTGCTAACGGT 59.926 57.895 0.00 0.00 0.00 4.83
3465 3595 2.162809 ACGGTTCACTTGGTTTGTTGTC 59.837 45.455 0.00 0.00 0.00 3.18
3535 3666 0.112995 TCAAGCCCAGCTGACCAATT 59.887 50.000 17.39 0.00 39.62 2.32
3538 3669 1.304381 GCCCAGCTGACCAATTCCA 60.304 57.895 17.39 0.00 0.00 3.53
3776 3959 8.810990 TTTTTATCGGGCCTCTCTTTTATTTA 57.189 30.769 0.84 0.00 0.00 1.40
3832 4015 7.339466 TCTCTAGCAAATTTACCTTCAATTCCC 59.661 37.037 0.00 0.00 0.00 3.97
3897 4081 4.234574 GGTGGAATTTCGTTTAAAGCAGG 58.765 43.478 0.00 0.00 0.00 4.85
4031 4215 5.048364 CCTCCACACCACGAATTATTTTTCA 60.048 40.000 0.00 0.00 0.00 2.69
4099 4284 4.081365 TCCTAAATTACGTCATGGAGTGCA 60.081 41.667 0.00 0.00 0.00 4.57
4120 4305 3.616379 CAGGTTGATTGCACAAAAACGTT 59.384 39.130 0.00 0.00 0.00 3.99
4193 4378 5.568620 ATCACCTGCCTTTATTAGTAGGG 57.431 43.478 0.00 0.00 33.05 3.53
4194 4379 3.714798 TCACCTGCCTTTATTAGTAGGGG 59.285 47.826 0.00 0.00 33.29 4.79
4197 4382 5.309806 CACCTGCCTTTATTAGTAGGGGTAT 59.690 44.000 0.00 0.00 33.05 2.73
4199 4384 6.729569 ACCTGCCTTTATTAGTAGGGGTATAG 59.270 42.308 0.00 0.00 33.05 1.31
4379 4576 3.189287 GGTTGATGAGCTTAATATGCGGG 59.811 47.826 0.00 0.00 35.28 6.13
4380 4577 2.426522 TGATGAGCTTAATATGCGGGC 58.573 47.619 0.00 0.00 35.28 6.13
4486 4683 9.910511 CTTACATATGTAACACCAAATACGAAC 57.089 33.333 21.73 0.00 35.75 3.95
4503 4700 5.917541 ACGAACGAACAATACTGTCAAAT 57.082 34.783 0.14 0.00 33.45 2.32
4538 4735 1.813513 ATTTCTCCGCACCTGTTCAG 58.186 50.000 0.00 0.00 0.00 3.02
4541 4738 1.069765 CTCCGCACCTGTTCAGTGT 59.930 57.895 0.00 0.00 37.56 3.55
4542 4739 0.532862 CTCCGCACCTGTTCAGTGTT 60.533 55.000 0.00 0.00 37.56 3.32
4543 4740 0.531974 TCCGCACCTGTTCAGTGTTC 60.532 55.000 0.00 0.00 37.56 3.18
4544 4741 0.813610 CCGCACCTGTTCAGTGTTCA 60.814 55.000 0.00 0.00 37.56 3.18
4545 4742 0.304705 CGCACCTGTTCAGTGTTCAC 59.695 55.000 0.00 0.00 37.56 3.18
4546 4743 0.663153 GCACCTGTTCAGTGTTCACC 59.337 55.000 0.00 0.00 37.56 4.02
4547 4744 2.016604 GCACCTGTTCAGTGTTCACCA 61.017 52.381 0.00 0.00 37.56 4.17
4618 4815 6.820656 GTCATCTTGTTGATATCAGGTTGAGT 59.179 38.462 5.39 0.00 33.36 3.41
4675 4872 8.968242 GTGATTGTTCCTGTTTTAATTCAGAAC 58.032 33.333 8.40 0.00 34.02 3.01
4792 4989 6.956497 AGAAGATAGAAGGAATCTTGCAACT 58.044 36.000 0.00 0.00 42.38 3.16
4836 5033 8.788325 ATTTATGACTAAGTGGTAGGAACAAC 57.212 34.615 0.00 0.00 33.68 3.32
5067 5264 4.626042 AGGATATGAGAAATCACGACAGC 58.374 43.478 0.00 0.00 0.00 4.40
5112 5842 6.536941 GGTCCTTGCTAATTTCTAGAACAGAG 59.463 42.308 4.18 3.68 33.83 3.35
5117 5847 6.418101 TGCTAATTTCTAGAACAGAGCCAAT 58.582 36.000 20.77 3.56 33.83 3.16
5200 5930 3.136763 CACAGAGCACACAGAGTTTCAT 58.863 45.455 0.00 0.00 0.00 2.57
5223 5953 3.624777 CCATCTACCATGGCTTTTCAGT 58.375 45.455 13.04 0.00 31.75 3.41
5302 6034 8.649841 CAATTATACAGGCATCAAAACAACTTG 58.350 33.333 0.00 0.00 0.00 3.16
5338 6070 3.989595 GCTTATCGTCTGCGCCGC 61.990 66.667 4.18 0.00 38.14 6.53
5352 6084 4.557942 CCGCAGGCATCAAAACAC 57.442 55.556 0.00 0.00 46.14 3.32
5441 6173 2.203983 TCCCTTGCCTCCTGCTCA 60.204 61.111 0.00 0.00 42.00 4.26
5459 6191 3.181496 GCTCAGCTTATAGTTTTGGTGGC 60.181 47.826 0.00 0.00 0.00 5.01
5491 6223 6.525629 AGAATACATGCACAATACTAGGGAC 58.474 40.000 0.00 0.00 0.00 4.46
5494 6226 3.388024 ACATGCACAATACTAGGGACGAT 59.612 43.478 0.00 0.00 0.00 3.73
5533 6265 0.251341 AGAGTTTCAAGGGCGGCAAT 60.251 50.000 12.47 0.00 0.00 3.56
5590 6322 0.818296 AGCTGATTACGAGTCGCCTT 59.182 50.000 13.59 0.00 0.00 4.35
5602 6334 0.320421 GTCGCCTTGCTGTGTAGGAA 60.320 55.000 0.00 0.00 33.13 3.36
5796 6532 0.036164 TGGCTGTATGCACCGTTCTT 59.964 50.000 0.00 0.00 45.15 2.52
6000 6807 2.641321 CCCAGGGAAGCTCATGATATCA 59.359 50.000 8.10 8.10 0.00 2.15
6064 6871 4.518970 TCGTCAGCCTCTTTATTGCTTTTT 59.481 37.500 0.00 0.00 31.77 1.94
6219 7026 2.486191 CCAGACCAACTCTTTGTCAGCT 60.486 50.000 0.00 0.00 0.00 4.24
6220 7027 3.244215 CCAGACCAACTCTTTGTCAGCTA 60.244 47.826 0.00 0.00 0.00 3.32
6258 7065 1.271707 TGCCCTGCCAGTTTAGGTTAC 60.272 52.381 0.00 0.00 31.99 2.50
6332 7139 7.309377 CCCCAGATTAGTTATGCAATATTGTGG 60.309 40.741 16.61 10.85 0.00 4.17
6339 7146 7.466746 AGTTATGCAATATTGTGGAAGTGTT 57.533 32.000 16.61 0.00 0.00 3.32
6401 7208 9.991906 TTATTTAATACTCCCTCCGTATCAAAG 57.008 33.333 0.00 0.00 0.00 2.77
6403 7210 5.952347 AATACTCCCTCCGTATCAAAGTT 57.048 39.130 0.00 0.00 0.00 2.66
6405 7212 3.939066 ACTCCCTCCGTATCAAAGTTTG 58.061 45.455 9.44 9.44 0.00 2.93
6564 7383 8.038944 TCCTGATACCTTGTATTGTTTGTACTC 58.961 37.037 0.00 0.00 0.00 2.59
6570 7389 8.691661 ACCTTGTATTGTTTGTACTCTTGATT 57.308 30.769 0.00 0.00 0.00 2.57
6571 7390 8.567948 ACCTTGTATTGTTTGTACTCTTGATTG 58.432 33.333 0.00 0.00 0.00 2.67
7323 8196 8.575649 TTCCTTAGGTCCATTCAGTAATTTTC 57.424 34.615 0.00 0.00 0.00 2.29
7364 8237 3.225608 GCCCTGACCTAGGCTCTTA 57.774 57.895 9.30 0.00 45.89 2.10
7481 8354 1.165270 GCAAATACGTTGGTGCTCCT 58.835 50.000 6.34 0.00 37.73 3.69
7485 8358 0.973632 ATACGTTGGTGCTCCTGTCA 59.026 50.000 6.34 0.00 34.23 3.58
7509 8441 7.557358 TCATATGCATCTGTTTTTACCTGATGT 59.443 33.333 0.19 0.00 39.25 3.06
7516 8448 3.242903 TGTTTTTACCTGATGTGTGCACG 60.243 43.478 13.13 0.00 0.00 5.34
7548 8480 1.140804 GCAACACCAACCACCACAC 59.859 57.895 0.00 0.00 0.00 3.82
7618 8579 6.598503 AGAAAATACCCTTAGAATAACCCGG 58.401 40.000 0.00 0.00 0.00 5.73
7655 8616 4.261888 GTGGTAGTGCACACGAGG 57.738 61.111 21.04 0.00 36.20 4.63
7662 8623 1.037493 AGTGCACACGAGGTGTTAGA 58.963 50.000 21.04 0.00 45.08 2.10
7663 8624 1.618837 AGTGCACACGAGGTGTTAGAT 59.381 47.619 21.04 0.00 45.08 1.98
7667 8628 3.699538 TGCACACGAGGTGTTAGATAGAT 59.300 43.478 12.21 0.00 45.08 1.98
7670 8631 3.243101 ACACGAGGTGTTAGATAGATGCG 60.243 47.826 0.00 0.00 45.08 4.73
7729 8690 1.003355 AGACATGTCCTTGTGGGCG 60.003 57.895 22.21 0.00 41.88 6.13
7743 8704 2.289756 TGTGGGCGCAACAGTAAGAATA 60.290 45.455 10.83 0.00 0.00 1.75
7744 8705 2.095372 GTGGGCGCAACAGTAAGAATAC 59.905 50.000 10.83 0.00 0.00 1.89
7749 8710 2.284288 CGCAACAGTAAGAATACGACGC 60.284 50.000 0.00 0.00 37.11 5.19
7751 8712 3.247442 CAACAGTAAGAATACGACGCCA 58.753 45.455 0.00 0.00 37.11 5.69
7763 8724 0.109781 CGACGCCAAATTTGTCCTGG 60.110 55.000 16.73 3.09 0.00 4.45
7768 8729 2.460757 CCAAATTTGTCCTGGCCTTG 57.539 50.000 16.73 0.00 0.00 3.61
7769 8730 1.969923 CCAAATTTGTCCTGGCCTTGA 59.030 47.619 16.73 0.00 0.00 3.02
7770 8731 2.368221 CCAAATTTGTCCTGGCCTTGAA 59.632 45.455 16.73 0.00 0.00 2.69
7771 8732 3.392882 CAAATTTGTCCTGGCCTTGAAC 58.607 45.455 10.15 0.00 0.00 3.18
7777 8738 0.321671 TCCTGGCCTTGAACGAGAAG 59.678 55.000 3.32 0.00 0.00 2.85
7785 8746 1.383744 CTTGAACGAGAAGAAGACGCG 59.616 52.381 3.53 3.53 36.71 6.01
7788 8749 2.049228 GAACGAGAAGAAGACGCGAAA 58.951 47.619 15.93 0.00 34.93 3.46
7814 8775 2.452767 CGAAGCTCGGTGGTTTACC 58.547 57.895 0.00 0.00 46.56 2.85
7823 8784 1.886886 GGTGGTTTACCGAGCTTTCA 58.113 50.000 0.00 0.00 40.26 2.69
7824 8785 2.223745 GGTGGTTTACCGAGCTTTCAA 58.776 47.619 0.00 0.00 40.26 2.69
7839 8800 0.250234 TTCAAGAGGTGATCTGGCGG 59.750 55.000 0.00 0.00 38.67 6.13
7854 8832 0.236449 GGCGGAACACTTGGTTTACG 59.764 55.000 0.00 0.00 40.63 3.18
7952 8930 2.010145 ACTCGGTCAATCATCCGTTG 57.990 50.000 3.64 1.78 45.88 4.10
7961 8939 2.704725 ATCATCCGTTGTTGTTGCAC 57.295 45.000 0.00 0.00 0.00 4.57
7982 8960 4.458989 CACTTGCTGCTAATAAAACAGGGA 59.541 41.667 0.00 0.00 31.94 4.20
7987 8965 6.397272 TGCTGCTAATAAAACAGGGAAAATG 58.603 36.000 0.00 0.00 31.94 2.32
7988 8966 5.812127 GCTGCTAATAAAACAGGGAAAATGG 59.188 40.000 0.00 0.00 31.94 3.16
7990 8968 5.116180 GCTAATAAAACAGGGAAAATGGGC 58.884 41.667 0.00 0.00 0.00 5.36
8004 8982 2.555732 ATGGGCTGAAATTGGTGGAT 57.444 45.000 0.00 0.00 0.00 3.41
8005 8983 1.559368 TGGGCTGAAATTGGTGGATG 58.441 50.000 0.00 0.00 0.00 3.51
8006 8984 1.076841 TGGGCTGAAATTGGTGGATGA 59.923 47.619 0.00 0.00 0.00 2.92
8007 8985 1.478105 GGGCTGAAATTGGTGGATGAC 59.522 52.381 0.00 0.00 0.00 3.06
8008 8986 1.133025 GGCTGAAATTGGTGGATGACG 59.867 52.381 0.00 0.00 0.00 4.35
8009 8987 1.133025 GCTGAAATTGGTGGATGACGG 59.867 52.381 0.00 0.00 0.00 4.79
8010 8988 2.710377 CTGAAATTGGTGGATGACGGA 58.290 47.619 0.00 0.00 0.00 4.69
8011 8989 3.282021 CTGAAATTGGTGGATGACGGAT 58.718 45.455 0.00 0.00 0.00 4.18
8012 8990 3.016031 TGAAATTGGTGGATGACGGATG 58.984 45.455 0.00 0.00 0.00 3.51
8013 8991 3.278574 GAAATTGGTGGATGACGGATGA 58.721 45.455 0.00 0.00 0.00 2.92
8014 8992 2.627515 ATTGGTGGATGACGGATGAG 57.372 50.000 0.00 0.00 0.00 2.90
8015 8993 0.107703 TTGGTGGATGACGGATGAGC 60.108 55.000 0.00 0.00 0.00 4.26
8016 8994 1.264045 TGGTGGATGACGGATGAGCA 61.264 55.000 0.00 0.00 0.00 4.26
8017 8995 0.107703 GGTGGATGACGGATGAGCAA 60.108 55.000 0.00 0.00 0.00 3.91
8018 8996 1.475751 GGTGGATGACGGATGAGCAAT 60.476 52.381 0.00 0.00 0.00 3.56
8019 8997 1.600957 GTGGATGACGGATGAGCAATG 59.399 52.381 0.00 0.00 0.00 2.82
8020 8998 0.590195 GGATGACGGATGAGCAATGC 59.410 55.000 0.00 0.00 0.00 3.56
8021 8999 1.590932 GATGACGGATGAGCAATGCT 58.409 50.000 7.79 7.79 43.88 3.79
8022 9000 2.548707 GGATGACGGATGAGCAATGCTA 60.549 50.000 8.12 0.00 39.88 3.49
8023 9001 1.939974 TGACGGATGAGCAATGCTAC 58.060 50.000 8.12 2.57 39.88 3.58
8024 9002 1.206849 TGACGGATGAGCAATGCTACA 59.793 47.619 8.12 8.77 39.88 2.74
8025 9003 1.594862 GACGGATGAGCAATGCTACAC 59.405 52.381 8.12 1.99 39.88 2.90
8026 9004 1.208052 ACGGATGAGCAATGCTACACT 59.792 47.619 8.12 0.00 39.88 3.55
8027 9005 2.283298 CGGATGAGCAATGCTACACTT 58.717 47.619 8.12 0.00 39.88 3.16
8028 9006 3.118775 ACGGATGAGCAATGCTACACTTA 60.119 43.478 8.12 0.00 39.88 2.24
8029 9007 3.492383 CGGATGAGCAATGCTACACTTAG 59.508 47.826 8.12 0.00 39.88 2.18
8039 9017 2.839474 GCTACACTTAGCGCTTGTTTG 58.161 47.619 18.68 10.89 41.50 2.93
8040 9018 2.412847 GCTACACTTAGCGCTTGTTTGG 60.413 50.000 18.68 11.50 41.50 3.28
8041 9019 1.961793 ACACTTAGCGCTTGTTTGGA 58.038 45.000 18.68 0.00 0.00 3.53
8042 9020 2.504367 ACACTTAGCGCTTGTTTGGAT 58.496 42.857 18.68 0.00 0.00 3.41
8043 9021 2.884639 ACACTTAGCGCTTGTTTGGATT 59.115 40.909 18.68 0.00 0.00 3.01
8044 9022 4.069304 ACACTTAGCGCTTGTTTGGATTA 58.931 39.130 18.68 0.00 0.00 1.75
8045 9023 4.083484 ACACTTAGCGCTTGTTTGGATTAC 60.083 41.667 18.68 0.00 0.00 1.89
8046 9024 3.439129 ACTTAGCGCTTGTTTGGATTACC 59.561 43.478 18.68 0.00 0.00 2.85
8047 9025 0.802494 AGCGCTTGTTTGGATTACCG 59.198 50.000 2.64 0.00 39.42 4.02
8048 9026 0.519961 GCGCTTGTTTGGATTACCGT 59.480 50.000 0.00 0.00 39.42 4.83
8049 9027 1.068816 GCGCTTGTTTGGATTACCGTT 60.069 47.619 0.00 0.00 39.42 4.44
8050 9028 2.606065 GCGCTTGTTTGGATTACCGTTT 60.606 45.455 0.00 0.00 39.42 3.60
8051 9029 2.977169 CGCTTGTTTGGATTACCGTTTG 59.023 45.455 0.00 0.00 39.42 2.93
8052 9030 3.549221 CGCTTGTTTGGATTACCGTTTGT 60.549 43.478 0.00 0.00 39.42 2.83
8053 9031 3.733727 GCTTGTTTGGATTACCGTTTGTG 59.266 43.478 0.00 0.00 39.42 3.33
8054 9032 4.735283 GCTTGTTTGGATTACCGTTTGTGT 60.735 41.667 0.00 0.00 39.42 3.72
8055 9033 4.555348 TGTTTGGATTACCGTTTGTGTC 57.445 40.909 0.00 0.00 39.42 3.67
8056 9034 3.315749 TGTTTGGATTACCGTTTGTGTCC 59.684 43.478 0.00 0.00 39.42 4.02
8057 9035 3.495434 TTGGATTACCGTTTGTGTCCT 57.505 42.857 0.00 0.00 39.42 3.85
8058 9036 2.773487 TGGATTACCGTTTGTGTCCTG 58.227 47.619 0.00 0.00 39.42 3.86
8059 9037 2.081462 GGATTACCGTTTGTGTCCTGG 58.919 52.381 0.00 0.00 32.96 4.45
8060 9038 2.551504 GGATTACCGTTTGTGTCCTGGT 60.552 50.000 0.00 0.00 36.72 4.00
8061 9039 2.243602 TTACCGTTTGTGTCCTGGTC 57.756 50.000 0.00 0.00 34.18 4.02
8062 9040 1.416243 TACCGTTTGTGTCCTGGTCT 58.584 50.000 0.00 0.00 34.18 3.85
8063 9041 0.106149 ACCGTTTGTGTCCTGGTCTC 59.894 55.000 0.00 0.00 0.00 3.36
8064 9042 0.105964 CCGTTTGTGTCCTGGTCTCA 59.894 55.000 0.00 0.00 0.00 3.27
8065 9043 1.502231 CGTTTGTGTCCTGGTCTCAG 58.498 55.000 0.00 0.00 40.59 3.35
8066 9044 1.068588 CGTTTGTGTCCTGGTCTCAGA 59.931 52.381 0.00 0.00 43.49 3.27
8067 9045 2.289072 CGTTTGTGTCCTGGTCTCAGAT 60.289 50.000 0.00 0.00 43.49 2.90
8068 9046 3.056821 CGTTTGTGTCCTGGTCTCAGATA 60.057 47.826 0.00 0.00 43.49 1.98
8069 9047 4.246458 GTTTGTGTCCTGGTCTCAGATAC 58.754 47.826 0.00 0.00 43.49 2.24
8070 9048 3.169512 TGTGTCCTGGTCTCAGATACA 57.830 47.619 0.00 0.00 43.49 2.29
8071 9049 2.826128 TGTGTCCTGGTCTCAGATACAC 59.174 50.000 17.20 17.20 46.30 2.90
8072 9050 3.093057 GTGTCCTGGTCTCAGATACACT 58.907 50.000 16.96 0.00 44.73 3.55
8073 9051 3.511934 GTGTCCTGGTCTCAGATACACTT 59.488 47.826 16.96 0.00 44.73 3.16
8074 9052 3.511540 TGTCCTGGTCTCAGATACACTTG 59.488 47.826 0.00 0.00 43.49 3.16
8075 9053 3.511934 GTCCTGGTCTCAGATACACTTGT 59.488 47.826 0.00 0.00 43.49 3.16
8076 9054 3.764434 TCCTGGTCTCAGATACACTTGTC 59.236 47.826 0.00 0.00 43.49 3.18
8077 9055 3.511540 CCTGGTCTCAGATACACTTGTCA 59.488 47.826 0.00 0.00 43.49 3.58
8078 9056 4.021104 CCTGGTCTCAGATACACTTGTCAA 60.021 45.833 0.00 0.00 43.49 3.18
8079 9057 5.511373 CCTGGTCTCAGATACACTTGTCAAA 60.511 44.000 0.00 0.00 43.49 2.69
8080 9058 5.924356 TGGTCTCAGATACACTTGTCAAAA 58.076 37.500 0.00 0.00 0.00 2.44
8081 9059 6.353323 TGGTCTCAGATACACTTGTCAAAAA 58.647 36.000 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.419387 GACAAGCTGGAGATATGGGCT 59.581 52.381 0.00 0.00 34.52 5.19
31 32 2.477375 GTTCACGAAGCCGTCAACAATA 59.523 45.455 0.18 0.00 46.67 1.90
34 35 2.303452 GTTCACGAAGCCGTCAACA 58.697 52.632 0.18 0.00 46.67 3.33
46 47 2.205074 GCTGAGTATGATGGGTTCACG 58.795 52.381 0.00 0.00 37.11 4.35
52 53 2.611473 GGTGATCGCTGAGTATGATGGG 60.611 54.545 6.18 0.00 0.00 4.00
70 71 2.191786 TTAGGGGTGATGCGGTGGTG 62.192 60.000 0.00 0.00 0.00 4.17
100 101 0.606401 AACGTGTGATGCAGGAAGGG 60.606 55.000 0.00 0.00 36.83 3.95
103 104 0.605319 GGGAACGTGTGATGCAGGAA 60.605 55.000 0.00 0.00 36.83 3.36
127 128 0.037326 TGCAGTTCTCGTGCTTAGGG 60.037 55.000 0.00 0.00 41.78 3.53
130 131 0.037326 CCCTGCAGTTCTCGTGCTTA 60.037 55.000 13.81 0.00 41.78 3.09
136 137 2.688446 TCTATACACCCTGCAGTTCTCG 59.312 50.000 13.81 0.00 0.00 4.04
169 170 2.076863 CAGAAAGTGAACATCCGTCCC 58.923 52.381 0.00 0.00 0.00 4.46
184 185 0.749091 CATGGGATCTGGCGCAGAAA 60.749 55.000 10.83 0.00 44.04 2.52
217 218 8.265055 CCCTATAGTCAATTCTGGTTCTACAAA 58.735 37.037 0.00 0.00 0.00 2.83
247 248 3.733337 GATCGCTAGGGTTCACAATGAT 58.267 45.455 11.82 0.00 0.00 2.45
265 266 1.300233 GACTCGGTGGATGGCGATC 60.300 63.158 0.00 0.00 0.00 3.69
295 296 3.517901 TGGTGGTAGATCAGAAATCGGTT 59.482 43.478 0.00 0.00 0.00 4.44
337 338 1.734655 TGAAAGAGTTGGGGCTCTCT 58.265 50.000 0.00 0.00 44.34 3.10
343 344 1.672881 GCGATGATGAAAGAGTTGGGG 59.327 52.381 0.00 0.00 0.00 4.96
349 350 2.102084 TCTGGAGGCGATGATGAAAGAG 59.898 50.000 0.00 0.00 0.00 2.85
373 375 2.506472 GGATCCGGCTCCCAAGAC 59.494 66.667 13.69 0.00 0.00 3.01
385 387 1.443828 GACAGAGGCTTCGGGATCC 59.556 63.158 1.92 1.92 0.00 3.36
448 451 4.323477 CGGCTGGGGTTCGGAACA 62.323 66.667 21.36 1.54 0.00 3.18
460 464 2.124695 GGTTTAGAGGGGCGGCTG 60.125 66.667 9.56 0.00 0.00 4.85
479 483 1.997606 CGATCTTGGACGGGTTGTTAC 59.002 52.381 0.00 0.00 0.00 2.50
480 484 1.066716 CCGATCTTGGACGGGTTGTTA 60.067 52.381 0.00 0.00 44.59 2.41
490 494 0.824109 CACTGCTACCCGATCTTGGA 59.176 55.000 5.25 0.00 0.00 3.53
538 542 1.829849 TCCAAGCTGGTGATCTCTCTG 59.170 52.381 0.00 0.00 39.03 3.35
541 546 1.489649 CCATCCAAGCTGGTGATCTCT 59.510 52.381 0.00 0.00 39.03 3.10
553 558 0.624500 TCTTCCCTCCCCCATCCAAG 60.625 60.000 0.00 0.00 0.00 3.61
554 559 0.624500 CTCTTCCCTCCCCCATCCAA 60.625 60.000 0.00 0.00 0.00 3.53
576 581 1.327690 TTCTAGGCCGGCGTTGAGAT 61.328 55.000 28.71 5.65 0.00 2.75
577 582 1.980232 TTCTAGGCCGGCGTTGAGA 60.980 57.895 28.71 21.45 0.00 3.27
578 583 1.810030 GTTCTAGGCCGGCGTTGAG 60.810 63.158 28.71 19.37 0.00 3.02
579 584 2.263540 GTTCTAGGCCGGCGTTGA 59.736 61.111 28.71 26.99 0.00 3.18
580 585 3.186047 CGTTCTAGGCCGGCGTTG 61.186 66.667 28.71 25.02 0.00 4.10
589 594 3.471244 CTCTCGGCGGCGTTCTAGG 62.471 68.421 31.06 14.45 0.00 3.02
590 595 2.024871 CTCTCGGCGGCGTTCTAG 59.975 66.667 31.06 20.51 0.00 2.43
623 628 1.431633 TGGACACACCTCTTCCCTCTA 59.568 52.381 0.00 0.00 39.86 2.43
632 637 4.137543 AGAATTGAGTTTGGACACACCTC 58.862 43.478 0.00 0.00 39.86 3.85
633 638 4.137543 GAGAATTGAGTTTGGACACACCT 58.862 43.478 0.00 0.00 39.86 4.00
634 639 3.058914 CGAGAATTGAGTTTGGACACACC 60.059 47.826 0.00 0.00 39.54 4.16
635 640 3.560068 ACGAGAATTGAGTTTGGACACAC 59.440 43.478 0.00 0.00 0.00 3.82
636 641 3.804036 ACGAGAATTGAGTTTGGACACA 58.196 40.909 0.00 0.00 0.00 3.72
637 642 4.527564 CAACGAGAATTGAGTTTGGACAC 58.472 43.478 0.00 0.00 0.00 3.67
638 643 3.563808 CCAACGAGAATTGAGTTTGGACA 59.436 43.478 0.00 0.00 0.00 4.02
639 644 3.609409 GCCAACGAGAATTGAGTTTGGAC 60.609 47.826 8.87 0.00 0.00 4.02
640 645 2.552315 GCCAACGAGAATTGAGTTTGGA 59.448 45.455 8.87 0.00 0.00 3.53
641 646 2.665519 CGCCAACGAGAATTGAGTTTGG 60.666 50.000 0.00 0.00 43.93 3.28
642 647 2.032030 ACGCCAACGAGAATTGAGTTTG 60.032 45.455 0.00 0.00 43.93 2.93
643 648 2.218603 ACGCCAACGAGAATTGAGTTT 58.781 42.857 0.00 0.00 43.93 2.66
644 649 1.878953 ACGCCAACGAGAATTGAGTT 58.121 45.000 0.00 0.00 43.93 3.01
645 650 2.607187 CTACGCCAACGAGAATTGAGT 58.393 47.619 0.00 0.00 43.93 3.41
646 651 1.324736 GCTACGCCAACGAGAATTGAG 59.675 52.381 0.00 0.00 43.93 3.02
647 652 1.067142 AGCTACGCCAACGAGAATTGA 60.067 47.619 0.00 0.00 43.93 2.57
648 653 1.324736 GAGCTACGCCAACGAGAATTG 59.675 52.381 0.00 0.00 43.93 2.32
649 654 1.641577 GAGCTACGCCAACGAGAATT 58.358 50.000 0.00 0.00 43.93 2.17
650 655 0.525668 CGAGCTACGCCAACGAGAAT 60.526 55.000 0.00 0.00 43.93 2.40
651 656 1.154093 CGAGCTACGCCAACGAGAA 60.154 57.895 0.00 0.00 43.93 2.87
652 657 1.859427 AACGAGCTACGCCAACGAGA 61.859 55.000 5.63 0.00 46.94 4.04
653 658 1.443872 AACGAGCTACGCCAACGAG 60.444 57.895 5.63 0.00 46.94 4.18
654 659 1.731613 CAACGAGCTACGCCAACGA 60.732 57.895 5.63 0.00 46.94 3.85
655 660 2.769617 CAACGAGCTACGCCAACG 59.230 61.111 5.63 0.00 46.94 4.10
656 661 2.474712 GCAACGAGCTACGCCAAC 59.525 61.111 5.63 0.00 46.94 3.77
674 679 4.067192 CGGGTCATCTGATTTGCATATCA 58.933 43.478 17.37 17.37 33.66 2.15
675 680 3.120060 GCGGGTCATCTGATTTGCATATC 60.120 47.826 9.93 9.93 0.00 1.63
676 681 2.816087 GCGGGTCATCTGATTTGCATAT 59.184 45.455 0.00 0.00 0.00 1.78
677 682 2.221169 GCGGGTCATCTGATTTGCATA 58.779 47.619 0.00 0.00 0.00 3.14
678 683 1.027357 GCGGGTCATCTGATTTGCAT 58.973 50.000 0.00 0.00 0.00 3.96
679 684 1.031571 GGCGGGTCATCTGATTTGCA 61.032 55.000 0.00 0.00 0.00 4.08
680 685 0.749454 AGGCGGGTCATCTGATTTGC 60.749 55.000 0.00 0.00 0.00 3.68
681 686 1.303309 GAGGCGGGTCATCTGATTTG 58.697 55.000 0.00 0.00 0.00 2.32
682 687 0.911769 TGAGGCGGGTCATCTGATTT 59.088 50.000 0.00 0.00 0.00 2.17
683 688 1.071385 GATGAGGCGGGTCATCTGATT 59.929 52.381 12.69 0.00 46.44 2.57
684 689 0.683973 GATGAGGCGGGTCATCTGAT 59.316 55.000 12.69 0.00 46.44 2.90
685 690 2.127839 GATGAGGCGGGTCATCTGA 58.872 57.895 12.69 0.00 46.44 3.27
686 691 4.766970 GATGAGGCGGGTCATCTG 57.233 61.111 12.69 0.00 46.44 2.90
715 720 0.387239 AAAGTTTTGGCTGATCGCGC 60.387 50.000 0.00 0.00 40.44 6.86
716 721 1.330306 CAAAGTTTTGGCTGATCGCG 58.670 50.000 0.00 0.00 40.44 5.87
726 731 2.355718 CGCCGGCCCAAAGTTTTG 60.356 61.111 23.46 0.00 37.90 2.44
727 732 4.293648 GCGCCGGCCCAAAGTTTT 62.294 61.111 23.46 0.00 0.00 2.43
746 751 2.107141 GGCAGTACTAGGCGCAGG 59.893 66.667 10.83 0.04 0.00 4.85
747 752 2.107141 GGGCAGTACTAGGCGCAG 59.893 66.667 10.83 0.19 41.96 5.18
749 754 0.391597 TATTGGGCAGTACTAGGCGC 59.608 55.000 13.43 13.43 42.61 6.53
750 755 1.687123 ACTATTGGGCAGTACTAGGCG 59.313 52.381 0.00 0.00 0.00 5.52
751 756 2.966516 AGACTATTGGGCAGTACTAGGC 59.033 50.000 0.00 2.62 0.00 3.93
752 757 5.615925 AAAGACTATTGGGCAGTACTAGG 57.384 43.478 0.00 0.00 0.00 3.02
773 778 4.577283 AGAACAGTAACGCAAGCCTAAAAA 59.423 37.500 0.00 0.00 45.62 1.94
774 779 4.024387 CAGAACAGTAACGCAAGCCTAAAA 60.024 41.667 0.00 0.00 45.62 1.52
775 780 3.496884 CAGAACAGTAACGCAAGCCTAAA 59.503 43.478 0.00 0.00 45.62 1.85
776 781 3.064207 CAGAACAGTAACGCAAGCCTAA 58.936 45.455 0.00 0.00 45.62 2.69
777 782 2.611971 CCAGAACAGTAACGCAAGCCTA 60.612 50.000 0.00 0.00 45.62 3.93
778 783 1.512926 CAGAACAGTAACGCAAGCCT 58.487 50.000 0.00 0.00 45.62 4.58
779 784 0.517316 CCAGAACAGTAACGCAAGCC 59.483 55.000 0.00 0.00 45.62 4.35
780 785 0.110192 GCCAGAACAGTAACGCAAGC 60.110 55.000 0.00 0.00 45.62 4.01
812 817 0.469144 TGGAACCAAACTGGGCTTCC 60.469 55.000 7.73 7.73 43.37 3.46
838 850 3.399181 CTAGGTTGAGCCGGGCCA 61.399 66.667 17.02 10.82 43.70 5.36
860 872 2.280524 CACCACCGTCGCTGGAAA 60.281 61.111 13.55 0.00 32.55 3.13
861 873 4.308458 CCACCACCGTCGCTGGAA 62.308 66.667 13.55 0.00 32.55 3.53
1238 1256 3.554524 CTCTGCACACCAAAAATACACG 58.445 45.455 0.00 0.00 0.00 4.49
1270 1288 2.687200 TCCCCATCCTGGTCCGTG 60.687 66.667 0.00 0.00 35.17 4.94
1276 1294 2.286425 ACCACCTCCCCATCCTGG 60.286 66.667 0.00 0.00 37.25 4.45
1443 1461 2.335729 CAACGCCACAGCATTGCA 59.664 55.556 11.91 0.00 35.12 4.08
1505 1523 3.328382 TTCATCGAGTCAAACCCGAAT 57.672 42.857 0.00 0.00 35.87 3.34
1541 1559 3.587061 AGTACCTCACCAATCACCATGAA 59.413 43.478 0.00 0.00 0.00 2.57
1608 1626 0.740737 GCCGGCACAAATCATAAGCT 59.259 50.000 24.80 0.00 0.00 3.74
1680 1698 1.476891 TGCTTTACTCCCTGCTCTACG 59.523 52.381 0.00 0.00 0.00 3.51
1922 1940 7.731882 TTTTAACAATGTCCAACGATACTCA 57.268 32.000 0.00 0.00 0.00 3.41
2069 2090 2.672961 TCAGACGGCCAAGTATTCAG 57.327 50.000 2.24 0.00 0.00 3.02
2083 2104 0.465460 TGCCACACCCTTGTTCAGAC 60.465 55.000 0.00 0.00 31.66 3.51
2266 2288 4.859304 AAGCATCAAAACAGCATCTTGA 57.141 36.364 0.00 0.00 33.82 3.02
2371 2393 5.411831 TGCAGATTCTATTGCGAGGATAT 57.588 39.130 0.00 0.00 43.13 1.63
2372 2394 4.871933 TGCAGATTCTATTGCGAGGATA 57.128 40.909 0.00 0.00 43.13 2.59
2373 2395 3.758755 TGCAGATTCTATTGCGAGGAT 57.241 42.857 0.00 0.00 43.13 3.24
2374 2396 3.461061 CTTGCAGATTCTATTGCGAGGA 58.539 45.455 5.93 0.00 44.49 3.71
2375 2397 3.874400 CTTGCAGATTCTATTGCGAGG 57.126 47.619 5.93 0.00 44.49 4.63
2376 2398 2.032204 GCCTTGCAGATTCTATTGCGAG 60.032 50.000 6.72 6.72 46.67 5.03
2377 2399 1.942657 GCCTTGCAGATTCTATTGCGA 59.057 47.619 0.00 0.00 43.13 5.10
2405 2445 1.908619 TCTGTGGACATAGTGCATGGT 59.091 47.619 0.00 0.00 39.13 3.55
2420 2460 7.758076 ACTTTGATGCATGTTGAATTATCTGTG 59.242 33.333 2.46 0.00 0.00 3.66
2518 2558 8.939929 TGCAACACATTCTAAAATAAGAGAGAG 58.060 33.333 0.00 0.00 0.00 3.20
2526 2566 7.990541 GCATGATGCAACACATTCTAAAATA 57.009 32.000 13.36 0.00 44.26 1.40
2712 2755 6.770303 TGGATCAAAAGAGTACAACACAATGA 59.230 34.615 0.00 0.00 0.00 2.57
2716 2759 8.862325 AATATGGATCAAAAGAGTACAACACA 57.138 30.769 0.00 0.00 0.00 3.72
2731 2774 5.308014 AGCAGCGACAATTAATATGGATCA 58.692 37.500 0.00 0.00 0.00 2.92
2774 2818 5.337250 CGACAATTAATATGGATCGGAGGGA 60.337 44.000 0.00 0.00 0.00 4.20
2775 2819 4.870426 CGACAATTAATATGGATCGGAGGG 59.130 45.833 0.00 0.00 0.00 4.30
2776 2820 4.330074 GCGACAATTAATATGGATCGGAGG 59.670 45.833 0.00 0.00 0.00 4.30
2777 2821 5.062683 CAGCGACAATTAATATGGATCGGAG 59.937 44.000 0.00 0.00 0.00 4.63
2778 2822 4.929211 CAGCGACAATTAATATGGATCGGA 59.071 41.667 0.00 0.00 0.00 4.55
2779 2823 4.436050 GCAGCGACAATTAATATGGATCGG 60.436 45.833 0.00 0.00 0.00 4.18
2780 2824 4.389992 AGCAGCGACAATTAATATGGATCG 59.610 41.667 0.00 0.00 0.00 3.69
2781 2825 5.869753 AGCAGCGACAATTAATATGGATC 57.130 39.130 0.00 0.00 0.00 3.36
2782 2826 7.445402 AGTTAAGCAGCGACAATTAATATGGAT 59.555 33.333 0.00 0.00 0.00 3.41
2783 2827 6.765989 AGTTAAGCAGCGACAATTAATATGGA 59.234 34.615 0.00 0.00 0.00 3.41
2784 2828 6.959361 AGTTAAGCAGCGACAATTAATATGG 58.041 36.000 0.00 0.00 0.00 2.74
2785 2829 8.841444 AAAGTTAAGCAGCGACAATTAATATG 57.159 30.769 0.00 0.00 0.00 1.78
2788 2832 9.931210 GTATAAAGTTAAGCAGCGACAATTAAT 57.069 29.630 0.00 0.00 0.00 1.40
2789 2833 9.158233 AGTATAAAGTTAAGCAGCGACAATTAA 57.842 29.630 0.00 0.00 0.00 1.40
2790 2834 8.712285 AGTATAAAGTTAAGCAGCGACAATTA 57.288 30.769 0.00 0.00 0.00 1.40
2791 2835 7.611213 AGTATAAAGTTAAGCAGCGACAATT 57.389 32.000 0.00 0.00 0.00 2.32
2792 2836 8.712285 TTAGTATAAAGTTAAGCAGCGACAAT 57.288 30.769 0.00 0.00 0.00 2.71
2793 2837 8.537049 TTTAGTATAAAGTTAAGCAGCGACAA 57.463 30.769 0.00 0.00 0.00 3.18
2794 2838 7.816031 ACTTTAGTATAAAGTTAAGCAGCGACA 59.184 33.333 8.72 0.00 37.18 4.35
2795 2839 8.182658 ACTTTAGTATAAAGTTAAGCAGCGAC 57.817 34.615 8.72 0.00 37.18 5.19
2796 2840 8.653338 CAACTTTAGTATAAAGTTAAGCAGCGA 58.347 33.333 21.13 0.00 45.57 4.93
2797 2841 8.440833 ACAACTTTAGTATAAAGTTAAGCAGCG 58.559 33.333 21.13 12.82 45.57 5.18
2809 2853 9.079833 CGCTGCTTTAGTACAACTTTAGTATAA 57.920 33.333 0.00 0.00 0.00 0.98
2810 2854 8.461222 TCGCTGCTTTAGTACAACTTTAGTATA 58.539 33.333 0.00 0.00 0.00 1.47
2811 2855 7.275123 GTCGCTGCTTTAGTACAACTTTAGTAT 59.725 37.037 0.00 0.00 0.00 2.12
2812 2856 6.583806 GTCGCTGCTTTAGTACAACTTTAGTA 59.416 38.462 0.00 0.00 0.00 1.82
2813 2857 5.404667 GTCGCTGCTTTAGTACAACTTTAGT 59.595 40.000 0.00 0.00 0.00 2.24
2814 2858 5.404366 TGTCGCTGCTTTAGTACAACTTTAG 59.596 40.000 0.00 0.00 0.00 1.85
2815 2859 5.291178 TGTCGCTGCTTTAGTACAACTTTA 58.709 37.500 0.00 0.00 0.00 1.85
2816 2860 4.124238 TGTCGCTGCTTTAGTACAACTTT 58.876 39.130 0.00 0.00 0.00 2.66
2817 2861 3.724374 TGTCGCTGCTTTAGTACAACTT 58.276 40.909 0.00 0.00 0.00 2.66
2818 2862 3.380479 TGTCGCTGCTTTAGTACAACT 57.620 42.857 0.00 0.00 0.00 3.16
2819 2863 4.663636 ATTGTCGCTGCTTTAGTACAAC 57.336 40.909 0.00 0.00 37.29 3.32
2820 2864 5.929992 ACTAATTGTCGCTGCTTTAGTACAA 59.070 36.000 0.00 0.00 38.16 2.41
2821 2865 5.475719 ACTAATTGTCGCTGCTTTAGTACA 58.524 37.500 0.00 0.00 32.78 2.90
2822 2866 6.128634 ACAACTAATTGTCGCTGCTTTAGTAC 60.129 38.462 0.00 0.00 46.46 2.73
2823 2867 5.929992 ACAACTAATTGTCGCTGCTTTAGTA 59.070 36.000 0.00 0.00 46.46 1.82
2824 2868 4.755123 ACAACTAATTGTCGCTGCTTTAGT 59.245 37.500 0.00 1.29 46.46 2.24
2825 2869 5.283060 ACAACTAATTGTCGCTGCTTTAG 57.717 39.130 0.00 0.72 46.46 1.85
2826 2870 5.929992 AGTACAACTAATTGTCGCTGCTTTA 59.070 36.000 0.00 0.00 46.46 1.85
2827 2871 4.755123 AGTACAACTAATTGTCGCTGCTTT 59.245 37.500 0.00 0.00 46.46 3.51
2828 2872 4.315803 AGTACAACTAATTGTCGCTGCTT 58.684 39.130 0.00 0.00 46.46 3.91
2829 2873 3.926616 AGTACAACTAATTGTCGCTGCT 58.073 40.909 0.00 0.00 46.46 4.24
2830 2874 5.773239 TTAGTACAACTAATTGTCGCTGC 57.227 39.130 0.00 0.00 46.46 5.25
2831 2875 6.128661 TGCTTTAGTACAACTAATTGTCGCTG 60.129 38.462 0.00 0.00 46.46 5.18
2832 2876 5.929992 TGCTTTAGTACAACTAATTGTCGCT 59.070 36.000 0.00 0.00 46.46 4.93
2833 2877 6.160664 TGCTTTAGTACAACTAATTGTCGC 57.839 37.500 0.00 0.00 46.46 5.19
2834 2878 6.241385 GCTGCTTTAGTACAACTAATTGTCG 58.759 40.000 0.00 0.00 46.46 4.35
2835 2879 6.090358 TCGCTGCTTTAGTACAACTAATTGTC 59.910 38.462 0.00 0.00 46.46 3.18
2837 2881 6.128661 TGTCGCTGCTTTAGTACAACTAATTG 60.129 38.462 0.00 0.00 40.08 2.32
2838 2882 5.929992 TGTCGCTGCTTTAGTACAACTAATT 59.070 36.000 0.00 0.00 40.08 1.40
2839 2883 5.475719 TGTCGCTGCTTTAGTACAACTAAT 58.524 37.500 0.00 0.00 40.08 1.73
2840 2884 4.873817 TGTCGCTGCTTTAGTACAACTAA 58.126 39.130 0.00 0.00 38.79 2.24
2841 2885 4.508461 TGTCGCTGCTTTAGTACAACTA 57.492 40.909 0.00 0.00 0.00 2.24
2907 3000 2.670251 CAACGCACGGGCCCTTTA 60.670 61.111 22.43 0.00 36.38 1.85
3064 3173 0.961019 ACATGCAAGCCGTGTTGAAT 59.039 45.000 0.00 0.00 40.77 2.57
3100 3213 4.058817 GGATGATAAGTAGCCCGTTTCTG 58.941 47.826 0.00 0.00 0.00 3.02
3115 3228 9.577222 ACACATGACATGAATAAATGGATGATA 57.423 29.630 22.19 0.00 31.15 2.15
3141 3254 0.037017 CGTACCAACACCCCATTCCA 59.963 55.000 0.00 0.00 0.00 3.53
3244 3371 2.224744 TGTTGAACATGCCCTAAGCTGA 60.225 45.455 0.00 0.00 44.23 4.26
3283 3410 0.318441 CTTGAGGTCGTGGAGCAGAA 59.682 55.000 0.00 0.00 31.89 3.02
3286 3413 2.159819 GAGCTTGAGGTCGTGGAGCA 62.160 60.000 0.00 0.00 35.86 4.26
3324 3451 0.319900 GTGAAGCAAGGACGAGCTCA 60.320 55.000 15.40 0.00 40.90 4.26
3336 3463 0.384309 ACGTTCGTCAGAGTGAAGCA 59.616 50.000 0.00 0.00 0.00 3.91
3365 3495 1.275856 CATAGAGGAGGCATGAGGAGC 59.724 57.143 0.00 0.00 0.00 4.70
3416 3546 6.136155 CAAAGGGGTGGGTAAATTATCAGAT 58.864 40.000 0.00 0.00 0.00 2.90
3448 3578 4.082463 GGTTGAGACAACAAACCAAGTGAA 60.082 41.667 14.89 0.00 32.07 3.18
3465 3595 4.818546 ACATCTTGTTTCAGACAGGTTGAG 59.181 41.667 6.42 0.00 39.94 3.02
3741 3924 7.690256 AGAGGCCCGATAAAAATAGAATATGT 58.310 34.615 0.00 0.00 0.00 2.29
3752 3935 8.990163 ATAAATAAAAGAGAGGCCCGATAAAA 57.010 30.769 0.00 0.00 0.00 1.52
3776 3959 8.587608 CCAATAAATAAGGACATACATGGCAAT 58.412 33.333 0.00 0.00 37.62 3.56
3832 4015 1.734465 GACAATCAACAAGCCTCCTCG 59.266 52.381 0.00 0.00 0.00 4.63
4099 4284 3.518634 ACGTTTTTGTGCAATCAACCT 57.481 38.095 0.00 0.00 0.00 3.50
4193 4378 9.841295 TTTGACCAACAATTCTATACCTATACC 57.159 33.333 0.00 0.00 38.36 2.73
4263 4458 3.192001 TGACACGTAATGTACTCCCTCAC 59.808 47.826 0.00 0.00 43.56 3.51
4486 4683 6.955963 GCTGAACTATTTGACAGTATTGTTCG 59.044 38.462 15.27 12.65 38.48 3.95
4503 4700 6.042777 CGGAGAAATATGACAAGCTGAACTA 58.957 40.000 0.00 0.00 0.00 2.24
4541 4738 7.178274 AGGACTAATAAATGCATTTGTGGTGAA 59.822 33.333 30.43 12.31 0.00 3.18
4542 4739 6.663093 AGGACTAATAAATGCATTTGTGGTGA 59.337 34.615 30.43 13.00 0.00 4.02
4543 4740 6.753279 CAGGACTAATAAATGCATTTGTGGTG 59.247 38.462 30.43 19.61 0.00 4.17
4544 4741 6.127366 CCAGGACTAATAAATGCATTTGTGGT 60.127 38.462 30.43 24.41 0.00 4.16
4545 4742 6.096705 TCCAGGACTAATAAATGCATTTGTGG 59.903 38.462 30.43 21.89 0.00 4.17
4546 4743 7.099266 TCCAGGACTAATAAATGCATTTGTG 57.901 36.000 30.43 17.18 0.00 3.33
4547 4744 6.891908 ACTCCAGGACTAATAAATGCATTTGT 59.108 34.615 30.43 23.06 0.00 2.83
4618 4815 3.951680 TGGTGTAGTAGCGAGAATGATGA 59.048 43.478 0.00 0.00 0.00 2.92
4675 4872 4.506288 TCATATGCAATTTGAGTCGTACGG 59.494 41.667 16.52 0.00 29.13 4.02
4834 5031 0.324943 ACCGTATGCTTCTGCCAGTT 59.675 50.000 0.00 0.00 38.71 3.16
4835 5032 1.137086 CTACCGTATGCTTCTGCCAGT 59.863 52.381 0.00 0.00 38.71 4.00
4836 5033 1.858091 CTACCGTATGCTTCTGCCAG 58.142 55.000 0.00 0.00 38.71 4.85
5067 5264 4.032703 CCAAATTTGGTATGCTCTTCCG 57.967 45.455 26.34 0.00 43.43 4.30
5112 5842 2.825836 CCAGGGTGCGAGATTGGC 60.826 66.667 0.00 0.00 0.00 4.52
5117 5847 1.198094 TTGATTCCCAGGGTGCGAGA 61.198 55.000 5.01 0.00 0.00 4.04
5192 5922 3.567164 CCATGGTAGATGGCATGAAACTC 59.433 47.826 3.81 0.00 31.75 3.01
5302 6034 1.604278 GCACTTGACACTTTCTGGTCC 59.396 52.381 0.00 0.00 33.09 4.46
5338 6070 0.037975 GCCTGGTGTTTTGATGCCTG 60.038 55.000 0.00 0.00 0.00 4.85
5441 6173 4.019321 TCTGAGCCACCAAAACTATAAGCT 60.019 41.667 0.00 0.00 0.00 3.74
5459 6191 8.671921 AGTATTGTGCATGTATTCTTTTCTGAG 58.328 33.333 0.00 0.00 0.00 3.35
5491 6223 2.858941 CAGACAGCTCTTGATGTGATCG 59.141 50.000 0.00 0.00 43.46 3.69
5494 6226 1.345415 TGCAGACAGCTCTTGATGTGA 59.655 47.619 0.00 0.00 43.46 3.58
5533 6265 5.420725 AGATGCAACTGTCCATACTGTTA 57.579 39.130 0.00 0.00 43.48 2.41
5602 6334 7.896383 TTAGCCATACAAATAGCAGGAAAAT 57.104 32.000 0.00 0.00 0.00 1.82
5617 6349 5.355350 AGCAGTGAACAAAGATTAGCCATAC 59.645 40.000 0.00 0.00 0.00 2.39
5804 6540 8.630037 CCACTAACCAGATACAGAAAACTTTTT 58.370 33.333 0.00 0.00 0.00 1.94
5805 6541 7.996644 TCCACTAACCAGATACAGAAAACTTTT 59.003 33.333 0.00 0.00 0.00 2.27
5806 6542 7.444487 GTCCACTAACCAGATACAGAAAACTTT 59.556 37.037 0.00 0.00 0.00 2.66
5844 6582 7.906327 ACAAAATGCCTTGATTACCAACTAAT 58.094 30.769 0.00 0.00 0.00 1.73
6000 6807 4.472833 AGGACATAGACAAGCCATCTTTCT 59.527 41.667 0.00 0.00 0.00 2.52
6038 6845 2.742053 GCAATAAAGAGGCTGACGAACA 59.258 45.455 0.00 0.00 0.00 3.18
6064 6871 6.595326 CAGATTTTGCAGTACTGATCCAGTAA 59.405 38.462 27.08 12.38 46.55 2.24
6080 6887 4.367386 AAGTAGCAGCATCAGATTTTGC 57.633 40.909 7.53 7.53 39.17 3.68
6219 7026 4.304110 GGCACTGCGCAATAATAGTAGTA 58.696 43.478 13.05 0.00 45.17 1.82
6220 7027 3.131396 GGCACTGCGCAATAATAGTAGT 58.869 45.455 13.05 0.00 45.17 2.73
6258 7065 1.153353 AGAATGGCAACGTAACACCG 58.847 50.000 0.00 0.00 42.51 4.94
6401 7208 4.319118 GCAAGAGCTCTAGTGTCAACAAAC 60.319 45.833 18.59 0.00 37.91 2.93
6403 7210 3.393800 GCAAGAGCTCTAGTGTCAACAA 58.606 45.455 18.59 0.00 37.91 2.83
6405 7212 2.289072 TGGCAAGAGCTCTAGTGTCAAC 60.289 50.000 18.15 7.22 41.70 3.18
6526 7345 5.599999 AGGTATCAGGACTACAACATGTC 57.400 43.478 0.00 0.00 0.00 3.06
6533 7352 7.490657 AACAATACAAGGTATCAGGACTACA 57.509 36.000 0.00 0.00 0.00 2.74
6564 7383 7.761651 TCGATCAATCTAAGTCACAATCAAG 57.238 36.000 0.00 0.00 0.00 3.02
6570 7389 7.765819 ACAAATCATCGATCAATCTAAGTCACA 59.234 33.333 0.00 0.00 0.00 3.58
6571 7390 8.060679 CACAAATCATCGATCAATCTAAGTCAC 58.939 37.037 0.00 0.00 0.00 3.67
6999 7819 2.871182 TTGATGATACGCTCGCTTCT 57.129 45.000 0.00 0.00 0.00 2.85
7323 8196 2.332063 ACACACTTGGACAGTCCTTG 57.668 50.000 20.82 16.02 37.46 3.61
7364 8237 3.557903 AAGACGCACATGCTGGCCT 62.558 57.895 3.32 0.00 39.32 5.19
7463 8336 2.151202 ACAGGAGCACCAACGTATTTG 58.849 47.619 2.07 0.00 38.94 2.32
7481 8354 6.883756 TCAGGTAAAAACAGATGCATATGACA 59.116 34.615 27.19 4.57 0.00 3.58
7485 8358 7.340232 ACACATCAGGTAAAAACAGATGCATAT 59.660 33.333 0.00 0.00 39.64 1.78
7525 8457 1.226547 GTGGTTGGTGTTGCACGTG 60.227 57.895 12.28 12.28 34.83 4.49
7548 8480 1.033746 AAATCTCAGTGGCATGCGGG 61.034 55.000 12.44 0.00 0.00 6.13
7633 8594 2.355363 TGTGCACTACCACGCGTC 60.355 61.111 19.41 0.00 38.55 5.19
7636 8597 2.355363 TCGTGTGCACTACCACGC 60.355 61.111 19.41 0.00 41.53 5.34
7655 8616 4.569761 TCAGGACGCATCTATCTAACAC 57.430 45.455 0.00 0.00 0.00 3.32
7662 8623 2.427453 AGTCGTTTCAGGACGCATCTAT 59.573 45.455 0.00 0.00 42.50 1.98
7663 8624 1.816835 AGTCGTTTCAGGACGCATCTA 59.183 47.619 0.00 0.00 42.50 1.98
7667 8628 4.336153 TGTATATAGTCGTTTCAGGACGCA 59.664 41.667 0.00 0.00 42.50 5.24
7670 8631 7.170998 CCCATTTGTATATAGTCGTTTCAGGAC 59.829 40.741 0.00 0.00 33.51 3.85
7726 8687 2.028883 GTCGTATTCTTACTGTTGCGCC 59.971 50.000 4.18 0.00 0.00 6.53
7729 8690 2.028883 GGCGTCGTATTCTTACTGTTGC 59.971 50.000 0.00 0.00 0.00 4.17
7743 8704 0.591170 CAGGACAAATTTGGCGTCGT 59.409 50.000 21.74 9.43 36.95 4.34
7744 8705 0.109781 CCAGGACAAATTTGGCGTCG 60.110 55.000 21.74 9.92 36.95 5.12
7749 8710 1.969923 TCAAGGCCAGGACAAATTTGG 59.030 47.619 21.74 5.95 35.06 3.28
7751 8712 2.035832 CGTTCAAGGCCAGGACAAATTT 59.964 45.455 5.01 0.00 0.00 1.82
7763 8724 1.721926 CGTCTTCTTCTCGTTCAAGGC 59.278 52.381 0.00 0.00 0.00 4.35
7764 8725 1.721926 GCGTCTTCTTCTCGTTCAAGG 59.278 52.381 0.00 0.00 0.00 3.61
7765 8726 1.383744 CGCGTCTTCTTCTCGTTCAAG 59.616 52.381 0.00 0.00 0.00 3.02
7766 8727 1.002142 TCGCGTCTTCTTCTCGTTCAA 60.002 47.619 5.77 0.00 0.00 2.69
7767 8728 0.589708 TCGCGTCTTCTTCTCGTTCA 59.410 50.000 5.77 0.00 0.00 3.18
7768 8729 1.682982 TTCGCGTCTTCTTCTCGTTC 58.317 50.000 5.77 0.00 0.00 3.95
7769 8730 2.129823 TTTCGCGTCTTCTTCTCGTT 57.870 45.000 5.77 0.00 0.00 3.85
7770 8731 2.349297 ATTTCGCGTCTTCTTCTCGT 57.651 45.000 5.77 0.00 0.00 4.18
7771 8732 3.399216 CAAATTTCGCGTCTTCTTCTCG 58.601 45.455 5.77 0.00 0.00 4.04
7777 8738 1.327507 GCACCAAATTTCGCGTCTTC 58.672 50.000 5.77 0.00 0.00 2.87
7785 8746 1.606606 CGAGCTTCGCACCAAATTTC 58.393 50.000 0.00 0.00 31.14 2.17
7788 8749 1.302511 ACCGAGCTTCGCACCAAAT 60.303 52.632 0.00 0.00 38.82 2.32
7814 8775 2.928757 CAGATCACCTCTTGAAAGCTCG 59.071 50.000 0.00 0.00 37.92 5.03
7823 8784 0.250513 GTTCCGCCAGATCACCTCTT 59.749 55.000 0.00 0.00 29.16 2.85
7824 8785 0.904865 TGTTCCGCCAGATCACCTCT 60.905 55.000 0.00 0.00 33.14 3.69
7839 8800 0.939419 ACGCCGTAAACCAAGTGTTC 59.061 50.000 0.00 0.00 35.67 3.18
7870 8848 4.241555 ATCTGGTCGGCGGATGGC 62.242 66.667 7.21 0.00 42.51 4.40
7872 8850 1.592669 GTGATCTGGTCGGCGGATG 60.593 63.158 7.21 0.00 0.00 3.51
7907 8885 1.697982 AGTACCTCCAAGAAAAGCGGT 59.302 47.619 0.00 0.00 0.00 5.68
7919 8897 3.210227 GACCGAGTTACCTAGTACCTCC 58.790 54.545 0.00 0.00 26.07 4.30
7927 8905 4.931661 GGATGATTGACCGAGTTACCTA 57.068 45.455 0.00 0.00 0.00 3.08
7961 8939 5.643379 TTCCCTGTTTTATTAGCAGCAAG 57.357 39.130 0.00 0.00 0.00 4.01
7970 8948 4.843516 TCAGCCCATTTTCCCTGTTTTATT 59.156 37.500 0.00 0.00 0.00 1.40
7971 8949 4.424842 TCAGCCCATTTTCCCTGTTTTAT 58.575 39.130 0.00 0.00 0.00 1.40
7973 8951 2.688477 TCAGCCCATTTTCCCTGTTTT 58.312 42.857 0.00 0.00 0.00 2.43
7974 8952 2.397044 TCAGCCCATTTTCCCTGTTT 57.603 45.000 0.00 0.00 0.00 2.83
7982 8960 2.978278 TCCACCAATTTCAGCCCATTTT 59.022 40.909 0.00 0.00 0.00 1.82
7987 8965 1.478105 GTCATCCACCAATTTCAGCCC 59.522 52.381 0.00 0.00 0.00 5.19
7988 8966 1.133025 CGTCATCCACCAATTTCAGCC 59.867 52.381 0.00 0.00 0.00 4.85
7990 8968 2.710377 TCCGTCATCCACCAATTTCAG 58.290 47.619 0.00 0.00 0.00 3.02
8004 8982 1.206849 TGTAGCATTGCTCATCCGTCA 59.793 47.619 15.81 2.16 40.44 4.35
8005 8983 1.594862 GTGTAGCATTGCTCATCCGTC 59.405 52.381 15.81 0.00 40.44 4.79
8006 8984 1.208052 AGTGTAGCATTGCTCATCCGT 59.792 47.619 15.81 0.00 40.44 4.69
8007 8985 1.945387 AGTGTAGCATTGCTCATCCG 58.055 50.000 15.81 0.00 40.44 4.18
8020 8998 3.064207 TCCAAACAAGCGCTAAGTGTAG 58.936 45.455 12.05 8.15 0.00 2.74
8021 8999 3.114668 TCCAAACAAGCGCTAAGTGTA 57.885 42.857 12.05 0.00 0.00 2.90
8022 9000 1.961793 TCCAAACAAGCGCTAAGTGT 58.038 45.000 12.05 9.29 0.00 3.55
8023 9001 3.559238 AATCCAAACAAGCGCTAAGTG 57.441 42.857 12.05 8.47 0.00 3.16
8024 9002 3.439129 GGTAATCCAAACAAGCGCTAAGT 59.561 43.478 12.05 10.43 0.00 2.24
8025 9003 3.485216 CGGTAATCCAAACAAGCGCTAAG 60.485 47.826 12.05 9.64 0.00 2.18
8026 9004 2.417239 CGGTAATCCAAACAAGCGCTAA 59.583 45.455 12.05 0.00 0.00 3.09
8027 9005 2.004017 CGGTAATCCAAACAAGCGCTA 58.996 47.619 12.05 0.00 0.00 4.26
8028 9006 0.802494 CGGTAATCCAAACAAGCGCT 59.198 50.000 2.64 2.64 0.00 5.92
8029 9007 0.519961 ACGGTAATCCAAACAAGCGC 59.480 50.000 0.00 0.00 36.37 5.92
8030 9008 2.977169 CAAACGGTAATCCAAACAAGCG 59.023 45.455 0.00 0.00 38.68 4.68
8031 9009 3.733727 CACAAACGGTAATCCAAACAAGC 59.266 43.478 0.00 0.00 0.00 4.01
8032 9010 4.927422 ACACAAACGGTAATCCAAACAAG 58.073 39.130 0.00 0.00 0.00 3.16
8033 9011 4.202030 GGACACAAACGGTAATCCAAACAA 60.202 41.667 0.00 0.00 35.15 2.83
8034 9012 3.315749 GGACACAAACGGTAATCCAAACA 59.684 43.478 0.00 0.00 35.15 2.83
8035 9013 3.566742 AGGACACAAACGGTAATCCAAAC 59.433 43.478 0.00 0.00 36.73 2.93
8036 9014 3.566322 CAGGACACAAACGGTAATCCAAA 59.434 43.478 0.00 0.00 36.73 3.28
8037 9015 3.142951 CAGGACACAAACGGTAATCCAA 58.857 45.455 0.00 0.00 36.73 3.53
8038 9016 2.551287 CCAGGACACAAACGGTAATCCA 60.551 50.000 0.00 0.00 36.73 3.41
8039 9017 2.081462 CCAGGACACAAACGGTAATCC 58.919 52.381 0.00 0.00 35.22 3.01
8040 9018 2.740447 GACCAGGACACAAACGGTAATC 59.260 50.000 0.00 0.00 0.00 1.75
8041 9019 2.370849 AGACCAGGACACAAACGGTAAT 59.629 45.455 0.00 0.00 0.00 1.89
8042 9020 1.764134 AGACCAGGACACAAACGGTAA 59.236 47.619 0.00 0.00 0.00 2.85
8043 9021 1.342174 GAGACCAGGACACAAACGGTA 59.658 52.381 0.00 0.00 0.00 4.02
8044 9022 0.106149 GAGACCAGGACACAAACGGT 59.894 55.000 0.00 0.00 0.00 4.83
8045 9023 0.105964 TGAGACCAGGACACAAACGG 59.894 55.000 0.00 0.00 0.00 4.44
8046 9024 1.068588 TCTGAGACCAGGACACAAACG 59.931 52.381 0.00 0.00 40.76 3.60
8047 9025 2.910688 TCTGAGACCAGGACACAAAC 57.089 50.000 0.00 0.00 40.76 2.93
8048 9026 3.901222 TGTATCTGAGACCAGGACACAAA 59.099 43.478 0.00 0.00 40.76 2.83
8049 9027 3.258372 GTGTATCTGAGACCAGGACACAA 59.742 47.826 18.07 0.00 45.96 3.33
8050 9028 2.826128 GTGTATCTGAGACCAGGACACA 59.174 50.000 18.07 0.00 45.96 3.72
8051 9029 3.093057 AGTGTATCTGAGACCAGGACAC 58.907 50.000 16.54 16.54 46.43 3.67
8052 9030 3.458044 AGTGTATCTGAGACCAGGACA 57.542 47.619 0.00 0.00 40.76 4.02
8053 9031 3.511934 ACAAGTGTATCTGAGACCAGGAC 59.488 47.826 0.00 0.00 40.76 3.85
8054 9032 3.764434 GACAAGTGTATCTGAGACCAGGA 59.236 47.826 0.00 0.00 40.76 3.86
8055 9033 3.511540 TGACAAGTGTATCTGAGACCAGG 59.488 47.826 0.00 0.00 40.76 4.45
8056 9034 4.790765 TGACAAGTGTATCTGAGACCAG 57.209 45.455 0.00 0.00 41.74 4.00
8057 9035 5.545063 TTTGACAAGTGTATCTGAGACCA 57.455 39.130 0.00 0.00 0.00 4.02
8058 9036 6.861065 TTTTTGACAAGTGTATCTGAGACC 57.139 37.500 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.