Multiple sequence alignment - TraesCS7A01G187300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G187300 chr7A 100.000 3098 0 0 1 3098 143036213 143039310 0.000000e+00 5722.0
1 TraesCS7A01G187300 chr7A 97.973 148 3 0 2147 2294 143038212 143038359 1.100000e-64 257.0
2 TraesCS7A01G187300 chr7A 97.973 148 3 0 2000 2147 143038359 143038506 1.100000e-64 257.0
3 TraesCS7A01G187300 chr7D 90.631 1078 41 17 876 1949 140810639 140811660 0.000000e+00 1376.0
4 TraesCS7A01G187300 chr7D 92.220 874 62 6 2 871 593173776 593174647 0.000000e+00 1232.0
5 TraesCS7A01G187300 chr7D 91.771 875 66 6 2 872 553480390 553481262 0.000000e+00 1212.0
6 TraesCS7A01G187300 chr5A 94.476 869 46 2 4 870 13017759 13016891 0.000000e+00 1338.0
7 TraesCS7A01G187300 chr3A 93.349 872 55 3 2 871 163892128 163892998 0.000000e+00 1286.0
8 TraesCS7A01G187300 chr4B 92.857 868 58 4 5 870 27543023 27542158 0.000000e+00 1256.0
9 TraesCS7A01G187300 chr4D 92.090 885 64 6 2 882 481199203 481200085 0.000000e+00 1242.0
10 TraesCS7A01G187300 chr4D 85.816 141 18 2 2162 2301 49876317 49876178 6.920000e-32 148.0
11 TraesCS7A01G187300 chr4D 84.507 142 18 4 2162 2301 461551837 461551698 1.500000e-28 137.0
12 TraesCS7A01G187300 chr4D 85.075 134 18 2 2015 2147 49876317 49876185 5.390000e-28 135.0
13 TraesCS7A01G187300 chr4D 83.704 135 18 4 2015 2147 461551837 461551705 1.170000e-24 124.0
14 TraesCS7A01G187300 chr3D 91.591 880 68 6 2 877 603951461 603950584 0.000000e+00 1210.0
15 TraesCS7A01G187300 chr3D 90.395 531 48 3 2568 3098 548232521 548233048 0.000000e+00 695.0
16 TraesCS7A01G187300 chr3D 88.889 531 56 3 2568 3098 548210359 548210886 0.000000e+00 651.0
17 TraesCS7A01G187300 chr3D 87.556 225 16 6 2394 2608 548232298 548232520 1.840000e-62 250.0
18 TraesCS7A01G187300 chr6D 91.638 873 63 8 2 870 327629393 327630259 0.000000e+00 1199.0
19 TraesCS7A01G187300 chr6D 91.200 875 70 7 2 871 11153114 11152242 0.000000e+00 1182.0
20 TraesCS7A01G187300 chr6D 79.924 264 45 8 2159 2418 454824472 454824731 1.470000e-43 187.0
21 TraesCS7A01G187300 chr6D 89.815 108 11 0 2872 2979 4692007 4692114 4.170000e-29 139.0
22 TraesCS7A01G187300 chr6D 97.222 36 1 0 3063 3098 4692186 4692221 9.280000e-06 62.1
23 TraesCS7A01G187300 chr6B 84.248 838 96 27 2283 3098 213158103 213158926 0.000000e+00 784.0
24 TraesCS7A01G187300 chr3B 84.864 403 46 10 2672 3063 534249275 534249673 2.900000e-105 392.0
25 TraesCS7A01G187300 chr2D 80.392 153 30 0 2148 2300 592065606 592065758 1.950000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G187300 chr7A 143036213 143039310 3097 False 2078.666667 5722 98.648667 1 3098 3 chr7A.!!$F1 3097
1 TraesCS7A01G187300 chr7D 140810639 140811660 1021 False 1376.000000 1376 90.631000 876 1949 1 chr7D.!!$F1 1073
2 TraesCS7A01G187300 chr7D 593173776 593174647 871 False 1232.000000 1232 92.220000 2 871 1 chr7D.!!$F3 869
3 TraesCS7A01G187300 chr7D 553480390 553481262 872 False 1212.000000 1212 91.771000 2 872 1 chr7D.!!$F2 870
4 TraesCS7A01G187300 chr5A 13016891 13017759 868 True 1338.000000 1338 94.476000 4 870 1 chr5A.!!$R1 866
5 TraesCS7A01G187300 chr3A 163892128 163892998 870 False 1286.000000 1286 93.349000 2 871 1 chr3A.!!$F1 869
6 TraesCS7A01G187300 chr4B 27542158 27543023 865 True 1256.000000 1256 92.857000 5 870 1 chr4B.!!$R1 865
7 TraesCS7A01G187300 chr4D 481199203 481200085 882 False 1242.000000 1242 92.090000 2 882 1 chr4D.!!$F1 880
8 TraesCS7A01G187300 chr3D 603950584 603951461 877 True 1210.000000 1210 91.591000 2 877 1 chr3D.!!$R1 875
9 TraesCS7A01G187300 chr3D 548210359 548210886 527 False 651.000000 651 88.889000 2568 3098 1 chr3D.!!$F1 530
10 TraesCS7A01G187300 chr3D 548232298 548233048 750 False 472.500000 695 88.975500 2394 3098 2 chr3D.!!$F2 704
11 TraesCS7A01G187300 chr6D 327629393 327630259 866 False 1199.000000 1199 91.638000 2 870 1 chr6D.!!$F1 868
12 TraesCS7A01G187300 chr6D 11152242 11153114 872 True 1182.000000 1182 91.200000 2 871 1 chr6D.!!$R1 869
13 TraesCS7A01G187300 chr6B 213158103 213158926 823 False 784.000000 784 84.248000 2283 3098 1 chr6B.!!$F1 815

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
550 552 0.321387 TCGTGGTCGCTACTCACTCT 60.321 55.0 7.87 0.0 36.96 3.24 F
2107 2116 0.033109 TTGCTCTCCCTCCTGATCGA 60.033 55.0 0.00 0.0 0.00 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2042 2051 0.030369 ATCCGACGGTCAGTAATCGC 59.970 55.0 14.79 0.0 33.25 4.58 R
3004 3097 0.759346 AAGGAAACCAGCGAGACAGT 59.241 50.0 0.00 0.0 0.00 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.276201 CAACCCGATGAATTACGCTGA 58.724 47.619 0.00 0.00 0.00 4.26
64 66 5.454062 AGCTGACTAGGTCTGAGTATTCAT 58.546 41.667 8.37 0.00 34.21 2.57
115 117 4.870021 ATTTGAGCTCCATTCCTACCTT 57.130 40.909 12.15 0.00 0.00 3.50
352 354 7.724305 TTAATATTACTCCACCGAATTCTGC 57.276 36.000 3.52 0.00 0.00 4.26
359 361 2.026729 TCCACCGAATTCTGCCAACATA 60.027 45.455 3.52 0.00 0.00 2.29
374 376 5.896106 TGCCAACATATTATTTGGGACATGA 59.104 36.000 0.00 0.00 42.34 3.07
467 469 5.481105 TGGAATTGCAGAAATGATTTGGTC 58.519 37.500 0.00 0.00 0.00 4.02
489 491 7.442969 TGGTCTTTAACAGAACATCACGTATTT 59.557 33.333 0.00 0.00 45.02 1.40
550 552 0.321387 TCGTGGTCGCTACTCACTCT 60.321 55.000 7.87 0.00 36.96 3.24
632 634 2.940994 TCTTCAACCGGTTTGGATGA 57.059 45.000 19.55 16.82 46.81 2.92
652 654 6.377429 GGATGACGGTCATGTAATAGGATAGA 59.623 42.308 27.11 0.00 37.20 1.98
778 782 9.634163 TTTTAGTTTTTCCAGTTTGAGACTTTC 57.366 29.630 0.00 0.00 36.10 2.62
831 836 2.867624 AGATGGCCGTATGCATCATTT 58.132 42.857 0.19 0.00 43.89 2.32
848 853 2.135903 TTTTGATGCAGAGGCCGGGA 62.136 55.000 2.18 0.00 40.13 5.14
900 905 5.760253 AGAAGACACAAATCGAGTCAATGTT 59.240 36.000 4.78 0.00 37.65 2.71
975 983 2.116983 ATCGCCACTCCAACTGCAGT 62.117 55.000 15.25 15.25 0.00 4.40
979 987 1.650912 CACTCCAACTGCAGTGTGC 59.349 57.895 22.49 0.00 45.29 4.57
1044 1053 2.259618 TCGTGAAGCGCAAGAAGATAC 58.740 47.619 11.47 0.00 41.07 2.24
1095 1104 2.038269 ACGCAACGCCGGAAATCAT 61.038 52.632 5.05 0.00 0.00 2.45
1102 1111 2.954753 GCCGGAAATCATAGCGCCG 61.955 63.158 5.05 0.00 41.53 6.46
1122 1131 0.749049 GAGGAAAATCATGGCAGCCC 59.251 55.000 9.64 0.00 0.00 5.19
1229 1238 2.053291 CGCTACGAGTACGCGGAG 60.053 66.667 24.99 24.99 44.95 4.63
1531 1540 2.305927 GGTTGGTGAGGGAGATGAAAGA 59.694 50.000 0.00 0.00 0.00 2.52
1532 1541 3.339141 GTTGGTGAGGGAGATGAAAGAC 58.661 50.000 0.00 0.00 0.00 3.01
1612 1621 4.697756 CGAGGGGCCGTTCTTGCA 62.698 66.667 0.00 0.00 0.00 4.08
1796 1805 4.129737 GTGCCGCACGAGAGCCTA 62.130 66.667 7.96 0.00 0.00 3.93
1797 1806 4.129737 TGCCGCACGAGAGCCTAC 62.130 66.667 0.00 0.00 0.00 3.18
1798 1807 3.827898 GCCGCACGAGAGCCTACT 61.828 66.667 0.00 0.00 0.00 2.57
1799 1808 2.409651 CCGCACGAGAGCCTACTC 59.590 66.667 0.00 0.00 43.82 2.59
1807 1816 3.878519 GAGCCTACTCGCGCGTCT 61.879 66.667 30.98 17.94 32.04 4.18
1808 1817 3.398353 GAGCCTACTCGCGCGTCTT 62.398 63.158 30.98 17.12 32.04 3.01
1809 1818 2.950194 GCCTACTCGCGCGTCTTC 60.950 66.667 30.98 11.40 0.00 2.87
1810 1819 2.792599 CCTACTCGCGCGTCTTCT 59.207 61.111 30.98 10.88 0.00 2.85
1811 1820 1.297745 CCTACTCGCGCGTCTTCTC 60.298 63.158 30.98 0.00 0.00 2.87
1812 1821 1.648756 CTACTCGCGCGTCTTCTCG 60.649 63.158 30.98 12.32 0.00 4.04
1813 1822 2.021964 CTACTCGCGCGTCTTCTCGA 62.022 60.000 30.98 6.53 0.00 4.04
1814 1823 2.646244 CTCGCGCGTCTTCTCGAG 60.646 66.667 30.98 13.33 41.66 4.04
1815 1824 3.116531 TCGCGCGTCTTCTCGAGA 61.117 61.111 30.98 12.08 32.84 4.04
1816 1825 2.646244 CGCGCGTCTTCTCGAGAG 60.646 66.667 24.19 10.08 34.31 3.20
1817 1826 2.277628 GCGCGTCTTCTCGAGAGG 60.278 66.667 17.94 17.94 41.97 3.69
1818 1827 2.751913 GCGCGTCTTCTCGAGAGGA 61.752 63.158 22.11 22.11 41.68 3.71
1819 1828 1.794864 CGCGTCTTCTCGAGAGGAA 59.205 57.895 26.71 10.20 41.68 3.36
1820 1829 0.247894 CGCGTCTTCTCGAGAGGAAG 60.248 60.000 27.97 27.97 41.68 3.46
1821 1830 0.099791 GCGTCTTCTCGAGAGGAAGG 59.900 60.000 31.00 24.26 41.68 3.46
1822 1831 1.740297 CGTCTTCTCGAGAGGAAGGA 58.260 55.000 26.71 12.87 41.68 3.36
1823 1832 1.668751 CGTCTTCTCGAGAGGAAGGAG 59.331 57.143 26.71 15.04 41.68 3.69
1824 1833 2.678479 CGTCTTCTCGAGAGGAAGGAGA 60.678 54.545 26.71 17.06 41.68 3.71
1825 1834 2.943033 GTCTTCTCGAGAGGAAGGAGAG 59.057 54.545 26.71 13.64 38.02 3.20
1826 1835 2.841266 TCTTCTCGAGAGGAAGGAGAGA 59.159 50.000 23.49 13.99 38.02 3.10
1870 1879 3.499737 GTCTTCATGCCGGCGTGG 61.500 66.667 40.57 28.49 42.50 4.94
1884 1893 3.370131 GTGGCATCGACACGTACG 58.630 61.111 15.01 15.01 29.47 3.67
1885 1894 2.505337 TGGCATCGACACGTACGC 60.505 61.111 16.72 0.00 0.00 4.42
1908 1917 1.727335 GCTACGTGAAAACCTGCTCTC 59.273 52.381 0.00 0.00 0.00 3.20
1909 1918 1.986378 CTACGTGAAAACCTGCTCTCG 59.014 52.381 0.00 0.00 35.34 4.04
1912 1921 1.864711 CGTGAAAACCTGCTCTCGAAA 59.135 47.619 0.00 0.00 31.91 3.46
1914 1923 3.604772 CGTGAAAACCTGCTCTCGAAAAG 60.605 47.826 0.00 0.00 31.91 2.27
1945 1954 3.508012 AGCGATGCTATTCCTAGGTACTG 59.492 47.826 9.08 0.00 36.54 2.74
1949 1958 5.509840 CGATGCTATTCCTAGGTACTGCTTT 60.510 44.000 9.08 2.74 41.52 3.51
1950 1959 5.693769 TGCTATTCCTAGGTACTGCTTTT 57.306 39.130 9.08 0.00 41.52 2.27
1951 1960 6.801718 TGCTATTCCTAGGTACTGCTTTTA 57.198 37.500 9.08 0.00 41.52 1.52
1952 1961 6.579865 TGCTATTCCTAGGTACTGCTTTTAC 58.420 40.000 9.08 0.00 41.52 2.01
1953 1962 6.155565 TGCTATTCCTAGGTACTGCTTTTACA 59.844 38.462 9.08 0.00 41.52 2.41
1954 1963 7.046033 GCTATTCCTAGGTACTGCTTTTACAA 58.954 38.462 9.08 0.00 41.52 2.41
1955 1964 7.551617 GCTATTCCTAGGTACTGCTTTTACAAA 59.448 37.037 9.08 0.00 41.52 2.83
1956 1965 9.444600 CTATTCCTAGGTACTGCTTTTACAAAA 57.555 33.333 9.08 0.00 41.52 2.44
1957 1966 8.700439 ATTCCTAGGTACTGCTTTTACAAAAA 57.300 30.769 9.08 0.00 41.52 1.94
1958 1967 8.700439 TTCCTAGGTACTGCTTTTACAAAAAT 57.300 30.769 9.08 0.00 41.52 1.82
1959 1968 8.700439 TCCTAGGTACTGCTTTTACAAAAATT 57.300 30.769 9.08 0.00 41.52 1.82
1960 1969 9.138596 TCCTAGGTACTGCTTTTACAAAAATTT 57.861 29.630 9.08 0.00 41.52 1.82
1961 1970 9.191995 CCTAGGTACTGCTTTTACAAAAATTTG 57.808 33.333 0.00 4.40 41.52 2.32
1962 1971 9.744468 CTAGGTACTGCTTTTACAAAAATTTGT 57.256 29.630 15.16 15.16 46.91 2.83
1963 1972 8.419076 AGGTACTGCTTTTACAAAAATTTGTG 57.581 30.769 19.07 6.82 44.85 3.33
1964 1973 8.038351 AGGTACTGCTTTTACAAAAATTTGTGT 58.962 29.630 17.87 17.87 44.85 3.72
1988 1997 8.925161 GTACTACTAGTACTAGTGATATCCGG 57.075 42.308 35.52 19.95 45.70 5.14
1989 1998 7.552050 ACTACTAGTACTAGTGATATCCGGT 57.448 40.000 35.52 20.42 45.25 5.28
1990 1999 7.385267 ACTACTAGTACTAGTGATATCCGGTG 58.615 42.308 35.52 18.14 45.25 4.94
1991 2000 6.430962 ACTAGTACTAGTGATATCCGGTGA 57.569 41.667 30.33 0.00 44.11 4.02
1992 2001 6.229733 ACTAGTACTAGTGATATCCGGTGAC 58.770 44.000 30.33 0.00 44.11 3.67
1993 2002 5.045012 AGTACTAGTGATATCCGGTGACA 57.955 43.478 5.39 0.00 0.00 3.58
1994 2003 5.064558 AGTACTAGTGATATCCGGTGACAG 58.935 45.833 5.39 0.00 0.00 3.51
1995 2004 4.166246 ACTAGTGATATCCGGTGACAGA 57.834 45.455 0.00 0.00 0.00 3.41
1996 2005 4.730966 ACTAGTGATATCCGGTGACAGAT 58.269 43.478 0.00 0.00 0.00 2.90
1997 2006 4.762765 ACTAGTGATATCCGGTGACAGATC 59.237 45.833 0.00 0.00 0.00 2.75
1998 2007 3.566351 AGTGATATCCGGTGACAGATCA 58.434 45.455 0.00 0.00 0.00 2.92
1999 2008 3.571828 AGTGATATCCGGTGACAGATCAG 59.428 47.826 0.00 0.00 34.75 2.90
2000 2009 2.893489 TGATATCCGGTGACAGATCAGG 59.107 50.000 0.00 0.00 34.75 3.86
2001 2010 2.748209 TATCCGGTGACAGATCAGGA 57.252 50.000 0.00 0.00 34.56 3.86
2002 2011 1.866015 ATCCGGTGACAGATCAGGAA 58.134 50.000 0.00 0.00 33.95 3.36
2003 2012 1.639722 TCCGGTGACAGATCAGGAAA 58.360 50.000 0.00 0.00 34.75 3.13
2004 2013 2.187958 TCCGGTGACAGATCAGGAAAT 58.812 47.619 0.00 0.00 34.75 2.17
2005 2014 3.371034 TCCGGTGACAGATCAGGAAATA 58.629 45.455 0.00 0.00 34.75 1.40
2006 2015 3.967326 TCCGGTGACAGATCAGGAAATAT 59.033 43.478 0.00 0.00 34.75 1.28
2007 2016 4.060900 CCGGTGACAGATCAGGAAATATG 58.939 47.826 0.00 0.00 34.75 1.78
2008 2017 4.443457 CCGGTGACAGATCAGGAAATATGT 60.443 45.833 0.00 0.00 34.75 2.29
2009 2018 5.118990 CGGTGACAGATCAGGAAATATGTT 58.881 41.667 0.00 0.00 34.75 2.71
2010 2019 6.280643 CGGTGACAGATCAGGAAATATGTTA 58.719 40.000 0.00 0.00 34.75 2.41
2011 2020 6.201044 CGGTGACAGATCAGGAAATATGTTAC 59.799 42.308 0.00 0.00 36.91 2.50
2012 2021 7.275920 GGTGACAGATCAGGAAATATGTTACT 58.724 38.462 0.00 0.00 37.45 2.24
2013 2022 7.770897 GGTGACAGATCAGGAAATATGTTACTT 59.229 37.037 0.00 0.00 37.45 2.24
2014 2023 8.607459 GTGACAGATCAGGAAATATGTTACTTG 58.393 37.037 0.00 0.00 35.60 3.16
2015 2024 7.770433 TGACAGATCAGGAAATATGTTACTTGG 59.230 37.037 0.00 0.00 31.52 3.61
2016 2025 7.056635 ACAGATCAGGAAATATGTTACTTGGG 58.943 38.462 0.00 0.00 26.77 4.12
2017 2026 7.092444 ACAGATCAGGAAATATGTTACTTGGGA 60.092 37.037 0.00 0.00 26.77 4.37
2018 2027 7.443575 CAGATCAGGAAATATGTTACTTGGGAG 59.556 40.741 0.00 0.00 0.00 4.30
2019 2028 6.884472 TCAGGAAATATGTTACTTGGGAGA 57.116 37.500 0.00 0.00 0.00 3.71
2020 2029 7.265599 TCAGGAAATATGTTACTTGGGAGAA 57.734 36.000 0.00 0.00 0.00 2.87
2021 2030 7.872138 TCAGGAAATATGTTACTTGGGAGAAT 58.128 34.615 0.00 0.00 0.00 2.40
2022 2031 8.998814 TCAGGAAATATGTTACTTGGGAGAATA 58.001 33.333 0.00 0.00 0.00 1.75
2023 2032 9.799106 CAGGAAATATGTTACTTGGGAGAATAT 57.201 33.333 0.00 0.00 0.00 1.28
2024 2033 9.799106 AGGAAATATGTTACTTGGGAGAATATG 57.201 33.333 0.00 0.00 0.00 1.78
2025 2034 9.014297 GGAAATATGTTACTTGGGAGAATATGG 57.986 37.037 0.00 0.00 0.00 2.74
2026 2035 8.940397 AAATATGTTACTTGGGAGAATATGGG 57.060 34.615 0.00 0.00 0.00 4.00
2027 2036 4.164843 TGTTACTTGGGAGAATATGGGC 57.835 45.455 0.00 0.00 0.00 5.36
2028 2037 3.139077 GTTACTTGGGAGAATATGGGCG 58.861 50.000 0.00 0.00 0.00 6.13
2029 2038 1.213296 ACTTGGGAGAATATGGGCGT 58.787 50.000 0.00 0.00 0.00 5.68
2030 2039 1.564348 ACTTGGGAGAATATGGGCGTT 59.436 47.619 0.00 0.00 0.00 4.84
2031 2040 2.222027 CTTGGGAGAATATGGGCGTTC 58.778 52.381 0.00 0.00 0.00 3.95
2032 2041 1.507140 TGGGAGAATATGGGCGTTCT 58.493 50.000 0.00 0.00 37.39 3.01
2033 2042 1.416401 TGGGAGAATATGGGCGTTCTC 59.584 52.381 6.58 6.58 46.02 2.87
2038 2047 3.929610 GAGAATATGGGCGTTCTCATAGC 59.070 47.826 9.54 0.00 46.03 2.97
2039 2048 3.580458 AGAATATGGGCGTTCTCATAGCT 59.420 43.478 0.00 0.00 28.93 3.32
2040 2049 4.040952 AGAATATGGGCGTTCTCATAGCTT 59.959 41.667 0.00 0.00 28.93 3.74
2041 2050 5.246203 AGAATATGGGCGTTCTCATAGCTTA 59.754 40.000 0.00 0.00 28.93 3.09
2042 2051 2.890808 TGGGCGTTCTCATAGCTTAG 57.109 50.000 0.00 0.00 0.00 2.18
2043 2052 1.202533 TGGGCGTTCTCATAGCTTAGC 60.203 52.381 0.00 0.00 0.00 3.09
2044 2053 1.132588 GGCGTTCTCATAGCTTAGCG 58.867 55.000 0.00 0.00 0.00 4.26
2045 2054 1.269102 GGCGTTCTCATAGCTTAGCGA 60.269 52.381 0.00 0.00 0.00 4.93
2046 2055 2.608261 GGCGTTCTCATAGCTTAGCGAT 60.608 50.000 0.00 0.00 0.00 4.58
2047 2056 3.053455 GCGTTCTCATAGCTTAGCGATT 58.947 45.455 0.00 0.00 0.00 3.34
2048 2057 4.227538 GCGTTCTCATAGCTTAGCGATTA 58.772 43.478 0.00 0.00 0.00 1.75
2049 2058 4.088781 GCGTTCTCATAGCTTAGCGATTAC 59.911 45.833 0.00 0.00 0.00 1.89
2050 2059 5.453648 CGTTCTCATAGCTTAGCGATTACT 58.546 41.667 0.00 0.00 0.00 2.24
2051 2060 5.340932 CGTTCTCATAGCTTAGCGATTACTG 59.659 44.000 0.00 0.00 0.00 2.74
2052 2061 6.439599 GTTCTCATAGCTTAGCGATTACTGA 58.560 40.000 0.00 0.00 0.00 3.41
2053 2062 6.003234 TCTCATAGCTTAGCGATTACTGAC 57.997 41.667 0.00 0.00 0.00 3.51
2054 2063 5.048643 TCTCATAGCTTAGCGATTACTGACC 60.049 44.000 0.00 0.00 0.00 4.02
2055 2064 2.493713 AGCTTAGCGATTACTGACCG 57.506 50.000 0.00 0.00 0.00 4.79
2056 2065 1.749634 AGCTTAGCGATTACTGACCGT 59.250 47.619 0.00 0.00 0.00 4.83
2057 2066 2.117910 GCTTAGCGATTACTGACCGTC 58.882 52.381 0.00 0.00 0.00 4.79
2058 2067 2.373269 CTTAGCGATTACTGACCGTCG 58.627 52.381 0.00 0.00 37.17 5.12
2059 2068 0.659427 TAGCGATTACTGACCGTCGG 59.341 55.000 10.48 10.48 34.85 4.79
2060 2069 1.028330 AGCGATTACTGACCGTCGGA 61.028 55.000 20.51 0.00 34.85 4.55
2061 2070 0.030369 GCGATTACTGACCGTCGGAT 59.970 55.000 20.51 1.57 34.85 4.18
2062 2071 1.925068 GCGATTACTGACCGTCGGATC 60.925 57.143 20.51 12.26 34.85 3.36
2063 2072 1.334779 CGATTACTGACCGTCGGATCC 60.335 57.143 20.51 0.00 0.00 3.36
2064 2073 0.666913 ATTACTGACCGTCGGATCCG 59.333 55.000 28.62 28.62 41.35 4.18
2065 2074 0.677731 TTACTGACCGTCGGATCCGT 60.678 55.000 32.15 14.63 40.74 4.69
2066 2075 0.677731 TACTGACCGTCGGATCCGTT 60.678 55.000 32.15 15.95 40.74 4.44
2067 2076 1.214589 CTGACCGTCGGATCCGTTT 59.785 57.895 32.15 15.59 40.74 3.60
2068 2077 0.389426 CTGACCGTCGGATCCGTTTT 60.389 55.000 32.15 15.94 40.74 2.43
2069 2078 0.033781 TGACCGTCGGATCCGTTTTT 59.966 50.000 32.15 16.30 40.74 1.94
2085 2094 2.270352 TTTTTGATGCGTCCTGGACT 57.730 45.000 23.49 6.02 0.00 3.85
2086 2095 1.522668 TTTTGATGCGTCCTGGACTG 58.477 50.000 23.49 17.39 0.00 3.51
2087 2096 0.396435 TTTGATGCGTCCTGGACTGT 59.604 50.000 23.49 9.86 0.00 3.55
2088 2097 0.396435 TTGATGCGTCCTGGACTGTT 59.604 50.000 23.49 8.43 0.00 3.16
2089 2098 0.396435 TGATGCGTCCTGGACTGTTT 59.604 50.000 23.49 6.70 0.00 2.83
2090 2099 0.798776 GATGCGTCCTGGACTGTTTG 59.201 55.000 23.49 9.50 0.00 2.93
2091 2100 1.237285 ATGCGTCCTGGACTGTTTGC 61.237 55.000 23.49 18.55 0.00 3.68
2092 2101 1.598130 GCGTCCTGGACTGTTTGCT 60.598 57.895 23.49 0.00 0.00 3.91
2093 2102 1.569479 GCGTCCTGGACTGTTTGCTC 61.569 60.000 23.49 0.00 0.00 4.26
2094 2103 0.034059 CGTCCTGGACTGTTTGCTCT 59.966 55.000 23.49 0.00 0.00 4.09
2095 2104 1.802069 GTCCTGGACTGTTTGCTCTC 58.198 55.000 19.53 0.00 0.00 3.20
2096 2105 0.687354 TCCTGGACTGTTTGCTCTCC 59.313 55.000 0.00 0.00 0.00 3.71
2097 2106 0.322008 CCTGGACTGTTTGCTCTCCC 60.322 60.000 0.00 0.00 0.00 4.30
2098 2107 0.689623 CTGGACTGTTTGCTCTCCCT 59.310 55.000 0.00 0.00 0.00 4.20
2099 2108 0.687354 TGGACTGTTTGCTCTCCCTC 59.313 55.000 0.00 0.00 0.00 4.30
2100 2109 0.035915 GGACTGTTTGCTCTCCCTCC 60.036 60.000 0.00 0.00 0.00 4.30
2101 2110 0.980423 GACTGTTTGCTCTCCCTCCT 59.020 55.000 0.00 0.00 0.00 3.69
2102 2111 0.689623 ACTGTTTGCTCTCCCTCCTG 59.310 55.000 0.00 0.00 0.00 3.86
2103 2112 0.979665 CTGTTTGCTCTCCCTCCTGA 59.020 55.000 0.00 0.00 0.00 3.86
2104 2113 1.558756 CTGTTTGCTCTCCCTCCTGAT 59.441 52.381 0.00 0.00 0.00 2.90
2105 2114 1.556911 TGTTTGCTCTCCCTCCTGATC 59.443 52.381 0.00 0.00 0.00 2.92
2106 2115 0.826715 TTTGCTCTCCCTCCTGATCG 59.173 55.000 0.00 0.00 0.00 3.69
2107 2116 0.033109 TTGCTCTCCCTCCTGATCGA 60.033 55.000 0.00 0.00 0.00 3.59
2108 2117 0.187117 TGCTCTCCCTCCTGATCGAT 59.813 55.000 0.00 0.00 0.00 3.59
2109 2118 1.425448 TGCTCTCCCTCCTGATCGATA 59.575 52.381 0.00 0.00 0.00 2.92
2110 2119 2.042297 TGCTCTCCCTCCTGATCGATAT 59.958 50.000 0.00 0.00 0.00 1.63
2111 2120 2.687935 GCTCTCCCTCCTGATCGATATC 59.312 54.545 0.00 0.00 0.00 1.63
2112 2121 2.942376 CTCTCCCTCCTGATCGATATCG 59.058 54.545 19.14 19.14 41.45 2.92
2113 2122 2.020720 CTCCCTCCTGATCGATATCGG 58.979 57.143 24.12 8.50 40.29 4.18
2114 2123 0.457851 CCCTCCTGATCGATATCGGC 59.542 60.000 24.12 16.65 37.20 5.54
2115 2124 0.457851 CCTCCTGATCGATATCGGCC 59.542 60.000 24.12 16.03 37.20 6.13
2116 2125 0.099613 CTCCTGATCGATATCGGCCG 59.900 60.000 22.12 22.12 37.20 6.13
2117 2126 0.608308 TCCTGATCGATATCGGCCGT 60.608 55.000 27.15 15.22 37.20 5.68
2118 2127 0.179161 CCTGATCGATATCGGCCGTC 60.179 60.000 27.15 14.95 37.20 4.79
2119 2128 0.521450 CTGATCGATATCGGCCGTCG 60.521 60.000 27.15 26.24 40.29 5.12
2120 2129 1.226323 GATCGATATCGGCCGTCGG 60.226 63.158 29.09 6.99 40.29 4.79
2121 2130 1.642037 GATCGATATCGGCCGTCGGA 61.642 60.000 29.09 19.01 40.29 4.55
2122 2131 1.030488 ATCGATATCGGCCGTCGGAT 61.030 55.000 29.09 20.08 40.29 4.18
2123 2132 1.226323 CGATATCGGCCGTCGGATC 60.226 63.158 27.15 20.25 39.77 3.36
2124 2133 1.226323 GATATCGGCCGTCGGATCG 60.226 63.158 27.15 17.56 39.77 3.69
2125 2134 1.642037 GATATCGGCCGTCGGATCGA 61.642 60.000 27.15 24.83 39.77 3.59
2135 2144 3.445687 CGGATCGACCCGGTGACA 61.446 66.667 11.52 0.00 45.43 3.58
2136 2145 2.183555 GGATCGACCCGGTGACAC 59.816 66.667 0.00 0.00 0.00 3.67
2137 2146 2.348888 GGATCGACCCGGTGACACT 61.349 63.158 5.39 0.00 0.00 3.55
2138 2147 1.153823 GATCGACCCGGTGACACTG 60.154 63.158 7.49 7.49 0.00 3.66
2139 2148 3.296709 ATCGACCCGGTGACACTGC 62.297 63.158 9.05 0.00 0.00 4.40
2140 2149 3.991051 CGACCCGGTGACACTGCT 61.991 66.667 9.05 0.00 0.00 4.24
2141 2150 2.632544 CGACCCGGTGACACTGCTA 61.633 63.158 9.05 0.00 0.00 3.49
2142 2151 1.080025 GACCCGGTGACACTGCTAC 60.080 63.158 9.05 0.00 0.00 3.58
2143 2152 1.812686 GACCCGGTGACACTGCTACA 61.813 60.000 9.05 0.00 0.00 2.74
2144 2153 1.369692 CCCGGTGACACTGCTACAA 59.630 57.895 9.05 0.00 0.00 2.41
2145 2154 0.036388 CCCGGTGACACTGCTACAAT 60.036 55.000 9.05 0.00 0.00 2.71
2146 2155 1.078709 CCGGTGACACTGCTACAATG 58.921 55.000 9.05 0.00 0.00 2.82
2147 2156 1.078709 CGGTGACACTGCTACAATGG 58.921 55.000 5.39 0.00 0.00 3.16
2148 2157 1.337728 CGGTGACACTGCTACAATGGA 60.338 52.381 5.39 0.00 0.00 3.41
2149 2158 2.778299 GGTGACACTGCTACAATGGAA 58.222 47.619 5.39 0.00 0.00 3.53
2150 2159 3.146066 GGTGACACTGCTACAATGGAAA 58.854 45.455 5.39 0.00 0.00 3.13
2151 2160 3.758554 GGTGACACTGCTACAATGGAAAT 59.241 43.478 5.39 0.00 0.00 2.17
2152 2161 4.941263 GGTGACACTGCTACAATGGAAATA 59.059 41.667 5.39 0.00 0.00 1.40
2153 2162 5.590259 GGTGACACTGCTACAATGGAAATAT 59.410 40.000 5.39 0.00 0.00 1.28
2154 2163 6.458751 GGTGACACTGCTACAATGGAAATATG 60.459 42.308 5.39 0.00 0.00 1.78
2155 2164 6.094048 GTGACACTGCTACAATGGAAATATGT 59.906 38.462 0.00 0.00 0.00 2.29
2156 2165 6.658816 TGACACTGCTACAATGGAAATATGTT 59.341 34.615 0.00 0.00 0.00 2.71
2157 2166 7.826744 TGACACTGCTACAATGGAAATATGTTA 59.173 33.333 0.00 0.00 0.00 2.41
2158 2167 7.985476 ACACTGCTACAATGGAAATATGTTAC 58.015 34.615 0.00 0.00 0.00 2.50
2159 2168 7.829211 ACACTGCTACAATGGAAATATGTTACT 59.171 33.333 0.00 0.00 0.00 2.24
2160 2169 8.677300 CACTGCTACAATGGAAATATGTTACTT 58.323 33.333 0.00 0.00 0.00 2.24
2161 2170 8.677300 ACTGCTACAATGGAAATATGTTACTTG 58.323 33.333 0.00 0.00 0.00 3.16
2162 2171 7.995289 TGCTACAATGGAAATATGTTACTTGG 58.005 34.615 0.00 0.00 0.00 3.61
2163 2172 7.068103 TGCTACAATGGAAATATGTTACTTGGG 59.932 37.037 0.00 0.00 0.00 4.12
2164 2173 7.284489 GCTACAATGGAAATATGTTACTTGGGA 59.716 37.037 0.00 0.00 0.00 4.37
2165 2174 7.645058 ACAATGGAAATATGTTACTTGGGAG 57.355 36.000 0.00 0.00 0.00 4.30
2166 2175 7.410174 ACAATGGAAATATGTTACTTGGGAGA 58.590 34.615 0.00 0.00 0.00 3.71
2167 2176 7.893302 ACAATGGAAATATGTTACTTGGGAGAA 59.107 33.333 0.00 0.00 0.00 2.87
2168 2177 7.881775 ATGGAAATATGTTACTTGGGAGAAC 57.118 36.000 0.00 0.00 0.00 3.01
2169 2178 6.785076 TGGAAATATGTTACTTGGGAGAACA 58.215 36.000 0.00 0.00 37.47 3.18
2170 2179 7.410174 TGGAAATATGTTACTTGGGAGAACAT 58.590 34.615 5.00 5.00 44.07 2.71
2171 2180 7.339212 TGGAAATATGTTACTTGGGAGAACATG 59.661 37.037 9.20 0.00 42.33 3.21
2172 2181 7.201821 GGAAATATGTTACTTGGGAGAACATGG 60.202 40.741 9.20 0.00 42.33 3.66
2173 2182 4.927267 ATGTTACTTGGGAGAACATGGA 57.073 40.909 0.00 0.00 41.17 3.41
2174 2183 4.015872 TGTTACTTGGGAGAACATGGAC 57.984 45.455 0.00 0.00 0.00 4.02
2175 2184 3.000727 GTTACTTGGGAGAACATGGACG 58.999 50.000 0.00 0.00 0.00 4.79
2176 2185 1.056660 ACTTGGGAGAACATGGACGT 58.943 50.000 0.00 0.00 0.00 4.34
2177 2186 1.420138 ACTTGGGAGAACATGGACGTT 59.580 47.619 0.00 0.00 0.00 3.99
2178 2187 2.076863 CTTGGGAGAACATGGACGTTC 58.923 52.381 0.00 0.00 44.63 3.95
2186 2195 3.786635 GAACATGGACGTTCTCATAGCT 58.213 45.455 0.00 0.00 41.70 3.32
2187 2196 3.895232 ACATGGACGTTCTCATAGCTT 57.105 42.857 0.00 0.00 0.00 3.74
2188 2197 5.339008 AACATGGACGTTCTCATAGCTTA 57.661 39.130 0.00 0.00 0.00 3.09
2189 2198 4.938080 ACATGGACGTTCTCATAGCTTAG 58.062 43.478 0.00 0.00 0.00 2.18
2190 2199 3.438297 TGGACGTTCTCATAGCTTAGC 57.562 47.619 0.00 0.00 0.00 3.09
2191 2200 2.223502 TGGACGTTCTCATAGCTTAGCG 60.224 50.000 0.00 0.00 0.00 4.26
2192 2201 2.033049 GGACGTTCTCATAGCTTAGCGA 59.967 50.000 0.00 0.00 0.00 4.93
2193 2202 3.304794 GGACGTTCTCATAGCTTAGCGAT 60.305 47.826 0.00 0.00 0.00 4.58
2194 2203 4.291783 GACGTTCTCATAGCTTAGCGATT 58.708 43.478 0.00 0.00 0.00 3.34
2195 2204 5.434352 ACGTTCTCATAGCTTAGCGATTA 57.566 39.130 0.00 0.00 0.00 1.75
2196 2205 5.213675 ACGTTCTCATAGCTTAGCGATTAC 58.786 41.667 0.00 0.00 0.00 1.89
2197 2206 5.008811 ACGTTCTCATAGCTTAGCGATTACT 59.991 40.000 0.00 0.00 0.00 2.24
2198 2207 5.340932 CGTTCTCATAGCTTAGCGATTACTG 59.659 44.000 0.00 0.00 0.00 2.74
2199 2208 6.439599 GTTCTCATAGCTTAGCGATTACTGA 58.560 40.000 0.00 0.00 0.00 3.41
2200 2209 6.003234 TCTCATAGCTTAGCGATTACTGAC 57.997 41.667 0.00 0.00 0.00 3.51
2201 2210 5.048643 TCTCATAGCTTAGCGATTACTGACC 60.049 44.000 0.00 0.00 0.00 4.02
2202 2211 2.493713 AGCTTAGCGATTACTGACCG 57.506 50.000 0.00 0.00 0.00 4.79
2203 2212 1.749634 AGCTTAGCGATTACTGACCGT 59.250 47.619 0.00 0.00 0.00 4.83
2204 2213 2.117910 GCTTAGCGATTACTGACCGTC 58.882 52.381 0.00 0.00 0.00 4.79
2205 2214 2.373269 CTTAGCGATTACTGACCGTCG 58.627 52.381 0.00 0.00 37.17 5.12
2206 2215 0.659427 TAGCGATTACTGACCGTCGG 59.341 55.000 10.48 10.48 34.85 4.79
2207 2216 1.028330 AGCGATTACTGACCGTCGGA 61.028 55.000 20.51 0.00 34.85 4.55
2208 2217 0.030369 GCGATTACTGACCGTCGGAT 59.970 55.000 20.51 1.57 34.85 4.18
2209 2218 1.925068 GCGATTACTGACCGTCGGATC 60.925 57.143 20.51 12.26 34.85 3.36
2210 2219 1.334779 CGATTACTGACCGTCGGATCC 60.335 57.143 20.51 0.00 0.00 3.36
2211 2220 0.666913 ATTACTGACCGTCGGATCCG 59.333 55.000 28.62 28.62 41.35 4.18
2212 2221 0.677731 TTACTGACCGTCGGATCCGT 60.678 55.000 32.15 14.63 40.74 4.69
2213 2222 0.677731 TACTGACCGTCGGATCCGTT 60.678 55.000 32.15 15.95 40.74 4.44
2214 2223 1.214589 CTGACCGTCGGATCCGTTT 59.785 57.895 32.15 15.59 40.74 3.60
2215 2224 0.389426 CTGACCGTCGGATCCGTTTT 60.389 55.000 32.15 15.94 40.74 2.43
2216 2225 0.033781 TGACCGTCGGATCCGTTTTT 59.966 50.000 32.15 16.30 40.74 1.94
2232 2241 2.270352 TTTTTGATGCGTCCTGGACT 57.730 45.000 23.49 6.02 0.00 3.85
2233 2242 1.522668 TTTTGATGCGTCCTGGACTG 58.477 50.000 23.49 17.39 0.00 3.51
2234 2243 0.396435 TTTGATGCGTCCTGGACTGT 59.604 50.000 23.49 9.86 0.00 3.55
2235 2244 0.396435 TTGATGCGTCCTGGACTGTT 59.604 50.000 23.49 8.43 0.00 3.16
2236 2245 0.396435 TGATGCGTCCTGGACTGTTT 59.604 50.000 23.49 6.70 0.00 2.83
2237 2246 0.798776 GATGCGTCCTGGACTGTTTG 59.201 55.000 23.49 9.50 0.00 2.93
2238 2247 0.396435 ATGCGTCCTGGACTGTTTGA 59.604 50.000 23.49 2.57 0.00 2.69
2239 2248 0.396435 TGCGTCCTGGACTGTTTGAT 59.604 50.000 23.49 0.00 0.00 2.57
2240 2249 1.079503 GCGTCCTGGACTGTTTGATC 58.920 55.000 23.49 0.00 0.00 2.92
2241 2250 1.338200 GCGTCCTGGACTGTTTGATCT 60.338 52.381 23.49 0.00 0.00 2.75
2242 2251 2.611518 CGTCCTGGACTGTTTGATCTC 58.388 52.381 23.49 0.00 0.00 2.75
2243 2252 2.675317 CGTCCTGGACTGTTTGATCTCC 60.675 54.545 23.49 0.00 0.00 3.71
2244 2253 1.909302 TCCTGGACTGTTTGATCTCCC 59.091 52.381 0.00 0.00 0.00 4.30
2245 2254 1.912043 CCTGGACTGTTTGATCTCCCT 59.088 52.381 0.00 0.00 0.00 4.20
2246 2255 2.093235 CCTGGACTGTTTGATCTCCCTC 60.093 54.545 0.00 0.00 0.00 4.30
2247 2256 1.909302 TGGACTGTTTGATCTCCCTCC 59.091 52.381 0.00 0.00 0.00 4.30
2248 2257 2.192263 GGACTGTTTGATCTCCCTCCT 58.808 52.381 0.00 0.00 0.00 3.69
2249 2258 2.093235 GGACTGTTTGATCTCCCTCCTG 60.093 54.545 0.00 0.00 0.00 3.86
2250 2259 2.834549 GACTGTTTGATCTCCCTCCTGA 59.165 50.000 0.00 0.00 0.00 3.86
2251 2260 3.454082 GACTGTTTGATCTCCCTCCTGAT 59.546 47.826 0.00 0.00 0.00 2.90
2252 2261 3.454082 ACTGTTTGATCTCCCTCCTGATC 59.546 47.826 0.00 0.00 39.43 2.92
2253 2262 2.432146 TGTTTGATCTCCCTCCTGATCG 59.568 50.000 0.00 0.00 41.24 3.69
2254 2263 2.695666 GTTTGATCTCCCTCCTGATCGA 59.304 50.000 0.00 0.00 41.24 3.59
2255 2264 2.988636 TGATCTCCCTCCTGATCGAT 57.011 50.000 0.00 0.00 41.24 3.59
2256 2265 4.388577 TTGATCTCCCTCCTGATCGATA 57.611 45.455 0.00 0.00 41.24 2.92
2257 2266 4.599720 TGATCTCCCTCCTGATCGATAT 57.400 45.455 0.00 0.00 41.24 1.63
2258 2267 4.531854 TGATCTCCCTCCTGATCGATATC 58.468 47.826 0.00 0.00 41.24 1.63
2259 2268 2.992593 TCTCCCTCCTGATCGATATCG 58.007 52.381 19.14 19.14 41.45 2.92
2260 2269 2.020720 CTCCCTCCTGATCGATATCGG 58.979 57.143 24.12 8.50 40.29 4.18
2261 2270 0.457851 CCCTCCTGATCGATATCGGC 59.542 60.000 24.12 16.65 37.20 5.54
2262 2271 0.457851 CCTCCTGATCGATATCGGCC 59.542 60.000 24.12 16.03 37.20 6.13
2263 2272 0.099613 CTCCTGATCGATATCGGCCG 59.900 60.000 22.12 22.12 37.20 6.13
2264 2273 0.608308 TCCTGATCGATATCGGCCGT 60.608 55.000 27.15 15.22 37.20 5.68
2265 2274 0.179161 CCTGATCGATATCGGCCGTC 60.179 60.000 27.15 14.95 37.20 4.79
2266 2275 0.521450 CTGATCGATATCGGCCGTCG 60.521 60.000 27.15 26.24 40.29 5.12
2267 2276 1.226323 GATCGATATCGGCCGTCGG 60.226 63.158 29.09 6.99 40.29 4.79
2268 2277 1.642037 GATCGATATCGGCCGTCGGA 61.642 60.000 29.09 19.01 40.29 4.55
2269 2278 1.030488 ATCGATATCGGCCGTCGGAT 61.030 55.000 29.09 20.08 40.29 4.18
2270 2279 1.226323 CGATATCGGCCGTCGGATC 60.226 63.158 27.15 20.25 39.77 3.36
2271 2280 1.226323 GATATCGGCCGTCGGATCG 60.226 63.158 27.15 17.56 39.77 3.69
2272 2281 1.642037 GATATCGGCCGTCGGATCGA 61.642 60.000 27.15 24.83 39.77 3.59
2296 2305 2.157668 CGGTGACACTGCTACAATGAAC 59.842 50.000 5.39 0.00 0.00 3.18
2298 2307 3.187227 GGTGACACTGCTACAATGAACAG 59.813 47.826 5.39 0.00 36.22 3.16
2301 2310 3.059884 ACACTGCTACAATGAACAGTCG 58.940 45.455 5.02 4.74 41.28 4.18
2317 2327 0.516001 GTCGGCTTTCCCTCGTTTTC 59.484 55.000 0.00 0.00 0.00 2.29
2320 2330 0.881796 GGCTTTCCCTCGTTTTCCAG 59.118 55.000 0.00 0.00 0.00 3.86
2328 2338 2.381589 CCTCGTTTTCCAGCGTTTTTC 58.618 47.619 0.00 0.00 0.00 2.29
2330 2340 1.743958 TCGTTTTCCAGCGTTTTTCCA 59.256 42.857 0.00 0.00 0.00 3.53
2342 2352 0.949588 TTTTTCCACACGCCGCGATA 60.950 50.000 21.79 0.00 0.00 2.92
2343 2353 0.741574 TTTTCCACACGCCGCGATAT 60.742 50.000 21.79 0.60 0.00 1.63
2357 2367 1.080434 GATATGGCCCTCGTCTCGC 60.080 63.158 0.00 0.00 0.00 5.03
2376 2386 3.334054 GCTGGGTGGCCCTCTCTT 61.334 66.667 0.00 0.00 45.70 2.85
2378 2388 1.614824 CTGGGTGGCCCTCTCTTCT 60.615 63.158 0.00 0.00 45.70 2.85
2386 2396 1.920325 CCCTCTCTTCTGTGGGCCA 60.920 63.158 0.00 0.00 34.50 5.36
2435 2445 1.008424 CTGCGTATGTCGATCGGCT 60.008 57.895 21.85 8.99 42.86 5.52
2492 2505 0.738412 ACCGCCTGTTAATTCGTCGG 60.738 55.000 0.00 0.00 40.98 4.79
2521 2534 4.893524 GGAGGGTAATTTCGGGATTTCATT 59.106 41.667 0.00 0.00 0.00 2.57
2524 2537 7.252612 AGGGTAATTTCGGGATTTCATTTTT 57.747 32.000 0.00 0.00 0.00 1.94
2539 2553 3.057547 TTTTTGTGGCGCTGCGTGT 62.058 52.632 24.04 0.00 0.00 4.49
2556 2570 4.444838 TCGCCCGTGGATTGGTCG 62.445 66.667 0.00 0.00 0.00 4.79
2596 2662 4.778143 ATTCGCCCCGCTCGCTTT 62.778 61.111 0.00 0.00 0.00 3.51
2647 2714 3.222855 CGCTCCTGCTCCGGATCT 61.223 66.667 3.57 0.00 36.97 2.75
2648 2715 2.733945 GCTCCTGCTCCGGATCTC 59.266 66.667 3.57 0.00 36.03 2.75
2649 2716 3.038280 CTCCTGCTCCGGATCTCG 58.962 66.667 3.57 0.00 38.88 4.04
2650 2717 1.826054 CTCCTGCTCCGGATCTCGT 60.826 63.158 3.57 0.00 37.11 4.18
2651 2718 1.791103 CTCCTGCTCCGGATCTCGTC 61.791 65.000 3.57 0.00 37.11 4.20
2652 2719 2.725008 CTGCTCCGGATCTCGTCC 59.275 66.667 3.57 0.00 44.10 4.79
2653 2720 1.826054 CTGCTCCGGATCTCGTCCT 60.826 63.158 3.57 0.00 45.46 3.85
2654 2721 1.791103 CTGCTCCGGATCTCGTCCTC 61.791 65.000 3.57 0.00 45.46 3.71
2655 2722 2.557372 GCTCCGGATCTCGTCCTCC 61.557 68.421 3.57 0.00 45.46 4.30
2656 2723 1.149627 CTCCGGATCTCGTCCTCCT 59.850 63.158 3.57 0.00 45.46 3.69
2657 2724 0.887387 CTCCGGATCTCGTCCTCCTC 60.887 65.000 3.57 0.00 45.46 3.71
2658 2725 1.899534 CCGGATCTCGTCCTCCTCC 60.900 68.421 0.00 0.00 45.46 4.30
2659 2726 1.149627 CGGATCTCGTCCTCCTCCT 59.850 63.158 0.00 0.00 45.46 3.69
2660 2727 0.887387 CGGATCTCGTCCTCCTCCTC 60.887 65.000 0.00 0.00 45.46 3.71
2661 2728 0.476771 GGATCTCGTCCTCCTCCTCT 59.523 60.000 0.00 0.00 44.16 3.69
2662 2729 1.700739 GGATCTCGTCCTCCTCCTCTA 59.299 57.143 0.00 0.00 44.16 2.43
2663 2730 2.106857 GGATCTCGTCCTCCTCCTCTAA 59.893 54.545 0.00 0.00 44.16 2.10
2664 2731 2.713863 TCTCGTCCTCCTCCTCTAAC 57.286 55.000 0.00 0.00 0.00 2.34
2665 2732 1.914108 TCTCGTCCTCCTCCTCTAACA 59.086 52.381 0.00 0.00 0.00 2.41
2666 2733 2.092861 TCTCGTCCTCCTCCTCTAACAG 60.093 54.545 0.00 0.00 0.00 3.16
2667 2734 0.741915 CGTCCTCCTCCTCTAACAGC 59.258 60.000 0.00 0.00 0.00 4.40
2668 2735 1.116308 GTCCTCCTCCTCTAACAGCC 58.884 60.000 0.00 0.00 0.00 4.85
2669 2736 0.395862 TCCTCCTCCTCTAACAGCCG 60.396 60.000 0.00 0.00 0.00 5.52
2670 2737 0.684805 CCTCCTCCTCTAACAGCCGT 60.685 60.000 0.00 0.00 0.00 5.68
2723 2815 0.252284 TTCCCCCTTCTCTCTTCGCT 60.252 55.000 0.00 0.00 0.00 4.93
2730 2822 3.193691 CCCTTCTCTCTTCGCTTGTTCTA 59.806 47.826 0.00 0.00 0.00 2.10
2766 2858 0.662619 CGTTTCTGCCTGTCTTGCAA 59.337 50.000 0.00 0.00 38.46 4.08
2767 2859 1.267806 CGTTTCTGCCTGTCTTGCAAT 59.732 47.619 0.00 0.00 38.46 3.56
2774 2866 1.619654 CCTGTCTTGCAATTGGGTCA 58.380 50.000 7.72 0.00 0.00 4.02
2799 2891 1.517832 CGGCGGAGGATCTGTCTTT 59.482 57.895 0.00 0.00 46.05 2.52
2847 2939 3.139077 GGCCCAGGTAGTTATTTGATCG 58.861 50.000 0.00 0.00 0.00 3.69
2860 2952 0.958091 TTGATCGGTTGTTTGCCTGG 59.042 50.000 0.00 0.00 0.00 4.45
2861 2953 0.893270 TGATCGGTTGTTTGCCTGGG 60.893 55.000 0.00 0.00 0.00 4.45
2866 2958 1.299850 GTTGTTTGCCTGGGCGTTC 60.300 57.895 7.14 0.70 45.51 3.95
2879 2971 0.384230 GGCGTTCGTGATGTGTTGTG 60.384 55.000 0.00 0.00 0.00 3.33
2895 2987 3.321648 TGCGGGTGCTGGACTGAT 61.322 61.111 0.00 0.00 43.34 2.90
2898 2991 1.648467 GCGGGTGCTGGACTGATTTC 61.648 60.000 0.00 0.00 38.39 2.17
2899 2992 1.026718 CGGGTGCTGGACTGATTTCC 61.027 60.000 0.00 0.00 36.03 3.13
2900 2993 0.681243 GGGTGCTGGACTGATTTCCC 60.681 60.000 0.00 0.00 34.33 3.97
2901 2994 0.681243 GGTGCTGGACTGATTTCCCC 60.681 60.000 0.00 0.00 34.33 4.81
2902 2995 0.681243 GTGCTGGACTGATTTCCCCC 60.681 60.000 0.00 0.00 34.33 5.40
3004 3097 4.063967 CCGCTGCTGGTGTACGGA 62.064 66.667 0.00 0.00 46.71 4.69
3005 3098 2.809601 CGCTGCTGGTGTACGGAC 60.810 66.667 0.00 0.00 0.00 4.79
3035 3128 1.546029 GGTTTCCTTGCAGGTGATTCC 59.454 52.381 0.00 0.00 36.53 3.01
3037 3130 2.489722 GTTTCCTTGCAGGTGATTCCTC 59.510 50.000 0.00 0.00 46.24 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.845781 TGTTGAGAAAGCTGAACCTCT 57.154 42.857 0.00 0.00 37.43 3.69
39 40 5.717178 TGAATACTCAGACCTAGTCAGCTTT 59.283 40.000 0.00 0.00 34.60 3.51
87 89 9.301897 GGTAGGAATGGAGCTCAAATTAATAAT 57.698 33.333 17.19 3.17 0.00 1.28
97 99 2.832838 TGAAGGTAGGAATGGAGCTCA 58.167 47.619 17.19 1.87 0.00 4.26
115 117 1.523154 GACCGCCCAAACATGCTTGA 61.523 55.000 10.43 0.00 0.00 3.02
197 199 6.428465 TCCAATTACGCTTTATCAAGTTGTCA 59.572 34.615 2.11 0.00 31.86 3.58
249 251 5.469479 GTGTTTGATTGTTTCATCCCGATT 58.531 37.500 0.00 0.00 33.34 3.34
352 354 7.587037 AGTCATGTCCCAAATAATATGTTGG 57.413 36.000 6.23 6.23 43.37 3.77
359 361 5.599656 CCCATCAAGTCATGTCCCAAATAAT 59.400 40.000 0.00 0.00 0.00 1.28
374 376 0.606401 CACGCTCAACCCCATCAAGT 60.606 55.000 0.00 0.00 0.00 3.16
550 552 3.092511 GCTCCCTGGCCTCCATCA 61.093 66.667 3.32 0.00 30.82 3.07
632 634 6.971726 TTGTCTATCCTATTACATGACCGT 57.028 37.500 0.00 0.00 0.00 4.83
755 759 7.931578 TGAAAGTCTCAAACTGGAAAAACTA 57.068 32.000 0.00 0.00 38.58 2.24
756 760 6.834168 TGAAAGTCTCAAACTGGAAAAACT 57.166 33.333 0.00 0.00 38.58 2.66
757 761 7.883229 TTTGAAAGTCTCAAACTGGAAAAAC 57.117 32.000 0.00 0.00 46.80 2.43
769 773 4.594970 TCCACAAAGGTTTGAAAGTCTCA 58.405 39.130 9.42 0.00 40.55 3.27
778 782 4.574892 ACAAAAGGTTCCACAAAGGTTTG 58.425 39.130 0.77 0.77 43.62 2.93
831 836 2.541547 CTTCCCGGCCTCTGCATCAA 62.542 60.000 0.00 0.00 40.13 2.57
871 876 3.574396 ACTCGATTTGTGTCTTCTCAGGA 59.426 43.478 0.00 0.00 0.00 3.86
872 877 3.919216 ACTCGATTTGTGTCTTCTCAGG 58.081 45.455 0.00 0.00 0.00 3.86
900 905 1.342074 ACTAGCTGGTCTGCTTGTCA 58.658 50.000 0.00 0.00 43.29 3.58
942 947 1.131504 TGGCGATATTTGAACGTTGCC 59.868 47.619 5.00 10.47 40.77 4.52
975 983 4.337060 CGAGGACGTGTCGGCACA 62.337 66.667 21.70 0.00 45.50 4.57
979 987 2.022902 CGATCGAGGACGTGTCGG 59.977 66.667 10.26 0.00 41.08 4.79
1028 1037 3.788874 GCGTATCTTCTTGCGCTTC 57.211 52.632 9.73 0.00 45.48 3.86
1088 1097 0.033504 TCCTCCGGCGCTATGATTTC 59.966 55.000 7.64 0.00 0.00 2.17
1095 1104 0.468226 ATGATTTTCCTCCGGCGCTA 59.532 50.000 7.64 0.00 0.00 4.26
1099 1108 1.037030 TGCCATGATTTTCCTCCGGC 61.037 55.000 0.00 0.00 34.75 6.13
1102 1111 0.749049 GGCTGCCATGATTTTCCTCC 59.251 55.000 15.17 0.00 0.00 4.30
1229 1238 3.672295 CTTGCGCTCCAGGTCCTCC 62.672 68.421 9.73 0.00 0.00 4.30
1512 1521 2.305927 GGTCTTTCATCTCCCTCACCAA 59.694 50.000 0.00 0.00 0.00 3.67
1595 1604 4.697756 TGCAAGAACGGCCCCTCG 62.698 66.667 0.00 0.00 0.00 4.63
1596 1605 3.056328 GTGCAAGAACGGCCCCTC 61.056 66.667 0.00 0.00 0.00 4.30
1605 1614 4.697756 CTCCCGCCCGTGCAAGAA 62.698 66.667 0.00 0.00 37.32 2.52
1634 1643 2.126031 GAGCCCAGAACGACGTCC 60.126 66.667 10.58 0.00 0.00 4.79
1691 1700 1.009449 CGCCTCGACGATCTCTTCC 60.009 63.158 0.00 0.00 34.06 3.46
1793 1802 1.297745 GAGAAGACGCGCGAGTAGG 60.298 63.158 39.36 6.47 0.00 3.18
1794 1803 1.648756 CGAGAAGACGCGCGAGTAG 60.649 63.158 39.36 16.14 32.29 2.57
1795 1804 2.021964 CTCGAGAAGACGCGCGAGTA 62.022 60.000 39.36 11.15 43.65 2.59
1796 1805 3.369860 CTCGAGAAGACGCGCGAGT 62.370 63.158 39.36 17.40 43.65 4.18
1797 1806 2.646244 CTCGAGAAGACGCGCGAG 60.646 66.667 39.36 17.15 43.25 5.03
1798 1807 3.084823 CTCTCGAGAAGACGCGCGA 62.085 63.158 39.36 10.55 39.03 5.87
1799 1808 2.646244 CTCTCGAGAAGACGCGCG 60.646 66.667 30.96 30.96 39.03 6.86
1800 1809 2.254703 TTCCTCTCGAGAAGACGCGC 62.255 60.000 17.36 0.00 39.03 6.86
1801 1810 0.247894 CTTCCTCTCGAGAAGACGCG 60.248 60.000 17.36 3.53 40.41 6.01
1802 1811 0.099791 CCTTCCTCTCGAGAAGACGC 59.900 60.000 17.36 0.00 0.00 5.19
1803 1812 1.668751 CTCCTTCCTCTCGAGAAGACG 59.331 57.143 17.36 13.17 0.00 4.18
1804 1813 2.943033 CTCTCCTTCCTCTCGAGAAGAC 59.057 54.545 17.36 0.00 32.45 3.01
1805 1814 2.841266 TCTCTCCTTCCTCTCGAGAAGA 59.159 50.000 17.36 13.45 32.45 2.87
1806 1815 3.206150 CTCTCTCCTTCCTCTCGAGAAG 58.794 54.545 17.36 10.95 32.45 2.85
1807 1816 2.682563 GCTCTCTCCTTCCTCTCGAGAA 60.683 54.545 17.36 0.00 32.45 2.87
1808 1817 1.134220 GCTCTCTCCTTCCTCTCGAGA 60.134 57.143 15.70 15.70 0.00 4.04
1809 1818 1.308998 GCTCTCTCCTTCCTCTCGAG 58.691 60.000 5.93 5.93 0.00 4.04
1810 1819 0.462937 CGCTCTCTCCTTCCTCTCGA 60.463 60.000 0.00 0.00 0.00 4.04
1811 1820 2.021722 CGCTCTCTCCTTCCTCTCG 58.978 63.158 0.00 0.00 0.00 4.04
1812 1821 1.733526 GCGCTCTCTCCTTCCTCTC 59.266 63.158 0.00 0.00 0.00 3.20
1813 1822 2.118404 CGCGCTCTCTCCTTCCTCT 61.118 63.158 5.56 0.00 0.00 3.69
1814 1823 2.411290 CGCGCTCTCTCCTTCCTC 59.589 66.667 5.56 0.00 0.00 3.71
1815 1824 3.832492 GCGCGCTCTCTCCTTCCT 61.832 66.667 26.67 0.00 0.00 3.36
1851 1860 2.742372 ACGCCGGCATGAAGACAC 60.742 61.111 28.98 0.00 0.00 3.67
1852 1861 2.741985 CACGCCGGCATGAAGACA 60.742 61.111 28.98 0.00 0.00 3.41
1853 1862 3.499737 CCACGCCGGCATGAAGAC 61.500 66.667 26.68 0.00 0.00 3.01
1870 1879 1.269810 CATGCGTACGTGTCGATGC 59.730 57.895 17.90 6.27 0.00 3.91
1873 1882 0.521867 GTAGCATGCGTACGTGTCGA 60.522 55.000 17.90 0.00 35.09 4.20
1884 1893 1.729149 GCAGGTTTTCACGTAGCATGC 60.729 52.381 10.51 10.51 0.00 4.06
1885 1894 1.806542 AGCAGGTTTTCACGTAGCATG 59.193 47.619 0.00 0.00 0.00 4.06
1908 1917 3.301642 GCATCGCTCCATTTTTCTTTTCG 59.698 43.478 0.00 0.00 0.00 3.46
1909 1918 4.488879 AGCATCGCTCCATTTTTCTTTTC 58.511 39.130 0.00 0.00 30.62 2.29
1912 1921 5.221126 GGAATAGCATCGCTCCATTTTTCTT 60.221 40.000 0.00 0.00 40.44 2.52
1914 1923 4.276926 AGGAATAGCATCGCTCCATTTTTC 59.723 41.667 0.00 0.00 40.44 2.29
1964 1973 8.526978 CACCGGATATCACTAGTACTAGTAGTA 58.473 40.741 30.34 24.54 43.98 1.82
1965 1974 7.234371 TCACCGGATATCACTAGTACTAGTAGT 59.766 40.741 30.34 23.46 43.98 2.73
1966 1975 7.545265 GTCACCGGATATCACTAGTACTAGTAG 59.455 44.444 30.34 23.69 43.98 2.57
1967 1976 7.015584 TGTCACCGGATATCACTAGTACTAGTA 59.984 40.741 30.34 18.48 43.98 1.82
1968 1977 6.183361 TGTCACCGGATATCACTAGTACTAGT 60.183 42.308 26.61 26.61 46.52 2.57
1969 1978 6.228995 TGTCACCGGATATCACTAGTACTAG 58.771 44.000 25.30 25.30 39.04 2.57
1970 1979 6.042437 TCTGTCACCGGATATCACTAGTACTA 59.958 42.308 9.46 1.89 0.00 1.82
1971 1980 5.045012 TGTCACCGGATATCACTAGTACT 57.955 43.478 9.46 0.00 0.00 2.73
1972 1981 5.061853 TCTGTCACCGGATATCACTAGTAC 58.938 45.833 9.46 0.00 0.00 2.73
1973 1982 5.300411 TCTGTCACCGGATATCACTAGTA 57.700 43.478 9.46 0.00 0.00 1.82
1974 1983 4.166246 TCTGTCACCGGATATCACTAGT 57.834 45.455 9.46 0.00 0.00 2.57
1975 1984 4.762251 TGATCTGTCACCGGATATCACTAG 59.238 45.833 9.46 0.00 36.80 2.57
1976 1985 4.725490 TGATCTGTCACCGGATATCACTA 58.275 43.478 9.46 0.00 36.80 2.74
1977 1986 3.566351 TGATCTGTCACCGGATATCACT 58.434 45.455 9.46 0.00 36.80 3.41
1978 1987 3.305676 CCTGATCTGTCACCGGATATCAC 60.306 52.174 9.46 0.00 36.80 3.06
1979 1988 2.893489 CCTGATCTGTCACCGGATATCA 59.107 50.000 9.46 6.70 36.80 2.15
1980 1989 3.157881 TCCTGATCTGTCACCGGATATC 58.842 50.000 9.46 2.02 36.80 1.63
1981 1990 3.244887 TCCTGATCTGTCACCGGATAT 57.755 47.619 9.46 0.00 36.80 1.63
1982 1991 2.748209 TCCTGATCTGTCACCGGATA 57.252 50.000 9.46 0.00 36.80 2.59
1983 1992 1.866015 TTCCTGATCTGTCACCGGAT 58.134 50.000 9.46 0.00 39.47 4.18
1984 1993 1.639722 TTTCCTGATCTGTCACCGGA 58.360 50.000 9.46 0.00 29.50 5.14
1985 1994 2.698855 ATTTCCTGATCTGTCACCGG 57.301 50.000 0.00 0.00 0.00 5.28
1986 1995 4.697514 ACATATTTCCTGATCTGTCACCG 58.302 43.478 0.00 0.00 0.00 4.94
1987 1996 7.275920 AGTAACATATTTCCTGATCTGTCACC 58.724 38.462 0.00 0.00 0.00 4.02
1988 1997 8.607459 CAAGTAACATATTTCCTGATCTGTCAC 58.393 37.037 0.00 0.00 0.00 3.67
1989 1998 7.770433 CCAAGTAACATATTTCCTGATCTGTCA 59.230 37.037 0.00 0.00 0.00 3.58
1990 1999 7.227512 CCCAAGTAACATATTTCCTGATCTGTC 59.772 40.741 0.00 0.00 0.00 3.51
1991 2000 7.056635 CCCAAGTAACATATTTCCTGATCTGT 58.943 38.462 0.00 0.00 0.00 3.41
1992 2001 7.282585 TCCCAAGTAACATATTTCCTGATCTG 58.717 38.462 0.00 0.00 0.00 2.90
1993 2002 7.348274 TCTCCCAAGTAACATATTTCCTGATCT 59.652 37.037 0.00 0.00 0.00 2.75
1994 2003 7.509546 TCTCCCAAGTAACATATTTCCTGATC 58.490 38.462 0.00 0.00 0.00 2.92
1995 2004 7.451731 TCTCCCAAGTAACATATTTCCTGAT 57.548 36.000 0.00 0.00 0.00 2.90
1996 2005 6.884472 TCTCCCAAGTAACATATTTCCTGA 57.116 37.500 0.00 0.00 0.00 3.86
1997 2006 9.799106 ATATTCTCCCAAGTAACATATTTCCTG 57.201 33.333 0.00 0.00 0.00 3.86
1998 2007 9.799106 CATATTCTCCCAAGTAACATATTTCCT 57.201 33.333 0.00 0.00 0.00 3.36
1999 2008 9.014297 CCATATTCTCCCAAGTAACATATTTCC 57.986 37.037 0.00 0.00 0.00 3.13
2000 2009 9.014297 CCCATATTCTCCCAAGTAACATATTTC 57.986 37.037 0.00 0.00 0.00 2.17
2001 2010 7.451566 GCCCATATTCTCCCAAGTAACATATTT 59.548 37.037 0.00 0.00 0.00 1.40
2002 2011 6.948309 GCCCATATTCTCCCAAGTAACATATT 59.052 38.462 0.00 0.00 0.00 1.28
2003 2012 6.485171 GCCCATATTCTCCCAAGTAACATAT 58.515 40.000 0.00 0.00 0.00 1.78
2004 2013 5.512404 CGCCCATATTCTCCCAAGTAACATA 60.512 44.000 0.00 0.00 0.00 2.29
2005 2014 4.729868 GCCCATATTCTCCCAAGTAACAT 58.270 43.478 0.00 0.00 0.00 2.71
2006 2015 3.433031 CGCCCATATTCTCCCAAGTAACA 60.433 47.826 0.00 0.00 0.00 2.41
2007 2016 3.139077 CGCCCATATTCTCCCAAGTAAC 58.861 50.000 0.00 0.00 0.00 2.50
2008 2017 2.775384 ACGCCCATATTCTCCCAAGTAA 59.225 45.455 0.00 0.00 0.00 2.24
2009 2018 2.404559 ACGCCCATATTCTCCCAAGTA 58.595 47.619 0.00 0.00 0.00 2.24
2010 2019 1.213296 ACGCCCATATTCTCCCAAGT 58.787 50.000 0.00 0.00 0.00 3.16
2011 2020 2.158755 AGAACGCCCATATTCTCCCAAG 60.159 50.000 0.00 0.00 28.79 3.61
2012 2021 1.843851 AGAACGCCCATATTCTCCCAA 59.156 47.619 0.00 0.00 28.79 4.12
2013 2022 1.416401 GAGAACGCCCATATTCTCCCA 59.584 52.381 3.13 0.00 43.35 4.37
2014 2023 1.416401 TGAGAACGCCCATATTCTCCC 59.584 52.381 10.60 0.00 46.89 4.30
2015 2024 2.910688 TGAGAACGCCCATATTCTCC 57.089 50.000 10.60 0.00 46.89 3.71
2017 2026 3.580458 AGCTATGAGAACGCCCATATTCT 59.420 43.478 0.00 0.00 37.88 2.40
2018 2027 3.931578 AGCTATGAGAACGCCCATATTC 58.068 45.455 0.00 0.00 0.00 1.75
2019 2028 4.357918 AAGCTATGAGAACGCCCATATT 57.642 40.909 0.00 0.00 0.00 1.28
2020 2029 4.621747 GCTAAGCTATGAGAACGCCCATAT 60.622 45.833 0.00 0.00 0.00 1.78
2021 2030 3.306088 GCTAAGCTATGAGAACGCCCATA 60.306 47.826 0.00 0.00 0.00 2.74
2022 2031 2.548920 GCTAAGCTATGAGAACGCCCAT 60.549 50.000 0.00 0.00 0.00 4.00
2023 2032 1.202533 GCTAAGCTATGAGAACGCCCA 60.203 52.381 0.00 0.00 0.00 5.36
2024 2033 1.503294 GCTAAGCTATGAGAACGCCC 58.497 55.000 0.00 0.00 0.00 6.13
2025 2034 1.132588 CGCTAAGCTATGAGAACGCC 58.867 55.000 0.00 0.00 0.00 5.68
2026 2035 2.121116 TCGCTAAGCTATGAGAACGC 57.879 50.000 0.00 0.00 0.00 4.84
2027 2036 5.340932 CAGTAATCGCTAAGCTATGAGAACG 59.659 44.000 0.00 0.00 0.00 3.95
2028 2037 6.361214 GTCAGTAATCGCTAAGCTATGAGAAC 59.639 42.308 0.00 0.00 0.00 3.01
2029 2038 6.439599 GTCAGTAATCGCTAAGCTATGAGAA 58.560 40.000 0.00 0.00 0.00 2.87
2030 2039 5.048643 GGTCAGTAATCGCTAAGCTATGAGA 60.049 44.000 0.00 0.00 0.00 3.27
2031 2040 5.157781 GGTCAGTAATCGCTAAGCTATGAG 58.842 45.833 0.00 0.00 0.00 2.90
2032 2041 4.320275 CGGTCAGTAATCGCTAAGCTATGA 60.320 45.833 0.00 0.00 0.00 2.15
2033 2042 3.914966 CGGTCAGTAATCGCTAAGCTATG 59.085 47.826 0.00 0.00 0.00 2.23
2034 2043 3.568853 ACGGTCAGTAATCGCTAAGCTAT 59.431 43.478 0.00 0.00 0.00 2.97
2035 2044 2.947652 ACGGTCAGTAATCGCTAAGCTA 59.052 45.455 0.00 0.00 0.00 3.32
2036 2045 1.749634 ACGGTCAGTAATCGCTAAGCT 59.250 47.619 0.00 0.00 0.00 3.74
2037 2046 2.117910 GACGGTCAGTAATCGCTAAGC 58.882 52.381 2.62 0.00 0.00 3.09
2038 2047 2.373269 CGACGGTCAGTAATCGCTAAG 58.627 52.381 9.10 0.00 0.00 2.18
2039 2048 1.064505 CCGACGGTCAGTAATCGCTAA 59.935 52.381 5.48 0.00 33.25 3.09
2040 2049 0.659427 CCGACGGTCAGTAATCGCTA 59.341 55.000 5.48 0.00 33.25 4.26
2041 2050 1.028330 TCCGACGGTCAGTAATCGCT 61.028 55.000 14.79 0.00 33.25 4.93
2042 2051 0.030369 ATCCGACGGTCAGTAATCGC 59.970 55.000 14.79 0.00 33.25 4.58
2043 2052 1.334779 GGATCCGACGGTCAGTAATCG 60.335 57.143 14.79 0.00 0.00 3.34
2044 2053 1.334779 CGGATCCGACGGTCAGTAATC 60.335 57.143 30.62 8.07 42.83 1.75
2045 2054 0.666913 CGGATCCGACGGTCAGTAAT 59.333 55.000 30.62 0.00 42.83 1.89
2046 2055 0.677731 ACGGATCCGACGGTCAGTAA 60.678 55.000 39.55 0.00 42.83 2.24
2047 2056 0.677731 AACGGATCCGACGGTCAGTA 60.678 55.000 39.55 0.00 42.83 2.74
2048 2057 1.530013 AAACGGATCCGACGGTCAGT 61.530 55.000 39.55 12.74 42.83 3.41
2049 2058 0.389426 AAAACGGATCCGACGGTCAG 60.389 55.000 39.55 13.31 42.83 3.51
2050 2059 0.033781 AAAAACGGATCCGACGGTCA 59.966 50.000 39.55 0.00 42.83 4.02
2051 2060 2.831597 AAAAACGGATCCGACGGTC 58.168 52.632 39.55 10.57 42.83 4.79
2066 2075 1.879380 CAGTCCAGGACGCATCAAAAA 59.121 47.619 14.32 0.00 37.67 1.94
2067 2076 1.202758 ACAGTCCAGGACGCATCAAAA 60.203 47.619 14.32 0.00 37.67 2.44
2068 2077 0.396435 ACAGTCCAGGACGCATCAAA 59.604 50.000 14.32 0.00 37.67 2.69
2069 2078 0.396435 AACAGTCCAGGACGCATCAA 59.604 50.000 14.32 0.00 37.67 2.57
2070 2079 0.396435 AAACAGTCCAGGACGCATCA 59.604 50.000 14.32 0.00 37.67 3.07
2071 2080 0.798776 CAAACAGTCCAGGACGCATC 59.201 55.000 14.32 0.00 37.67 3.91
2072 2081 1.237285 GCAAACAGTCCAGGACGCAT 61.237 55.000 14.32 0.59 37.67 4.73
2073 2082 1.891919 GCAAACAGTCCAGGACGCA 60.892 57.895 14.32 0.00 37.67 5.24
2074 2083 1.569479 GAGCAAACAGTCCAGGACGC 61.569 60.000 14.32 10.86 37.67 5.19
2075 2084 0.034059 AGAGCAAACAGTCCAGGACG 59.966 55.000 14.32 11.39 37.67 4.79
2076 2085 1.609320 GGAGAGCAAACAGTCCAGGAC 60.609 57.143 12.25 12.25 0.00 3.85
2077 2086 0.687354 GGAGAGCAAACAGTCCAGGA 59.313 55.000 0.00 0.00 0.00 3.86
2078 2087 0.322008 GGGAGAGCAAACAGTCCAGG 60.322 60.000 0.00 0.00 0.00 4.45
2079 2088 0.689623 AGGGAGAGCAAACAGTCCAG 59.310 55.000 0.00 0.00 0.00 3.86
2080 2089 0.687354 GAGGGAGAGCAAACAGTCCA 59.313 55.000 0.00 0.00 0.00 4.02
2081 2090 0.035915 GGAGGGAGAGCAAACAGTCC 60.036 60.000 0.00 0.00 0.00 3.85
2082 2091 0.980423 AGGAGGGAGAGCAAACAGTC 59.020 55.000 0.00 0.00 0.00 3.51
2083 2092 0.689623 CAGGAGGGAGAGCAAACAGT 59.310 55.000 0.00 0.00 0.00 3.55
2084 2093 0.979665 TCAGGAGGGAGAGCAAACAG 59.020 55.000 0.00 0.00 0.00 3.16
2085 2094 1.556911 GATCAGGAGGGAGAGCAAACA 59.443 52.381 0.00 0.00 0.00 2.83
2086 2095 1.472376 CGATCAGGAGGGAGAGCAAAC 60.472 57.143 0.00 0.00 0.00 2.93
2087 2096 0.826715 CGATCAGGAGGGAGAGCAAA 59.173 55.000 0.00 0.00 0.00 3.68
2088 2097 0.033109 TCGATCAGGAGGGAGAGCAA 60.033 55.000 0.00 0.00 0.00 3.91
2089 2098 0.187117 ATCGATCAGGAGGGAGAGCA 59.813 55.000 0.00 0.00 0.00 4.26
2090 2099 2.208132 TATCGATCAGGAGGGAGAGC 57.792 55.000 0.00 0.00 0.00 4.09
2091 2100 2.942376 CGATATCGATCAGGAGGGAGAG 59.058 54.545 20.50 0.00 43.02 3.20
2092 2101 2.356227 CCGATATCGATCAGGAGGGAGA 60.356 54.545 26.32 0.00 43.02 3.71
2093 2102 2.020720 CCGATATCGATCAGGAGGGAG 58.979 57.143 26.32 1.01 43.02 4.30
2094 2103 1.955683 GCCGATATCGATCAGGAGGGA 60.956 57.143 26.32 0.00 43.02 4.20
2095 2104 0.457851 GCCGATATCGATCAGGAGGG 59.542 60.000 26.32 7.23 43.02 4.30
2096 2105 0.457851 GGCCGATATCGATCAGGAGG 59.542 60.000 26.32 7.95 43.02 4.30
2097 2106 0.099613 CGGCCGATATCGATCAGGAG 59.900 60.000 26.32 8.68 43.02 3.69
2098 2107 0.608308 ACGGCCGATATCGATCAGGA 60.608 55.000 35.90 0.00 43.02 3.86
2099 2108 0.179161 GACGGCCGATATCGATCAGG 60.179 60.000 35.90 10.13 43.02 3.86
2100 2109 0.521450 CGACGGCCGATATCGATCAG 60.521 60.000 35.90 18.32 43.02 2.90
2101 2110 1.500396 CGACGGCCGATATCGATCA 59.500 57.895 35.90 0.00 43.02 2.92
2102 2111 1.226323 CCGACGGCCGATATCGATC 60.226 63.158 35.90 16.32 43.02 3.69
2103 2112 1.030488 ATCCGACGGCCGATATCGAT 61.030 55.000 35.90 20.77 43.02 3.59
2104 2113 1.642037 GATCCGACGGCCGATATCGA 61.642 60.000 35.90 19.52 43.02 3.59
2105 2114 1.226323 GATCCGACGGCCGATATCG 60.226 63.158 35.90 29.38 41.76 2.92
2106 2115 1.226323 CGATCCGACGGCCGATATC 60.226 63.158 35.90 24.19 41.76 1.63
2107 2116 1.673337 TCGATCCGACGGCCGATAT 60.673 57.895 35.90 18.56 41.76 1.63
2108 2117 2.281002 TCGATCCGACGGCCGATA 60.281 61.111 35.90 14.21 41.76 2.92
2109 2118 3.962421 GTCGATCCGACGGCCGAT 61.962 66.667 35.90 15.66 46.56 4.18
2119 2128 2.183555 GTGTCACCGGGTCGATCC 59.816 66.667 4.00 4.00 0.00 3.36
2120 2129 1.153823 CAGTGTCACCGGGTCGATC 60.154 63.158 6.32 0.00 0.00 3.69
2121 2130 2.970639 CAGTGTCACCGGGTCGAT 59.029 61.111 6.32 0.00 0.00 3.59
2122 2131 3.986006 GCAGTGTCACCGGGTCGA 61.986 66.667 6.32 0.00 0.00 4.20
2123 2132 2.632544 TAGCAGTGTCACCGGGTCG 61.633 63.158 6.32 0.00 0.00 4.79
2124 2133 1.080025 GTAGCAGTGTCACCGGGTC 60.080 63.158 6.32 0.00 0.00 4.46
2125 2134 1.404479 TTGTAGCAGTGTCACCGGGT 61.404 55.000 6.32 0.00 0.00 5.28
2126 2135 0.036388 ATTGTAGCAGTGTCACCGGG 60.036 55.000 6.32 0.00 0.00 5.73
2127 2136 1.078709 CATTGTAGCAGTGTCACCGG 58.921 55.000 0.00 0.00 0.00 5.28
2128 2137 1.078709 CCATTGTAGCAGTGTCACCG 58.921 55.000 0.00 0.00 0.00 4.94
2129 2138 2.472695 TCCATTGTAGCAGTGTCACC 57.527 50.000 0.00 0.00 0.00 4.02
2130 2139 6.094048 ACATATTTCCATTGTAGCAGTGTCAC 59.906 38.462 0.00 0.00 0.00 3.67
2131 2140 6.179756 ACATATTTCCATTGTAGCAGTGTCA 58.820 36.000 0.00 0.00 0.00 3.58
2132 2141 6.683974 ACATATTTCCATTGTAGCAGTGTC 57.316 37.500 0.00 0.00 0.00 3.67
2133 2142 7.829211 AGTAACATATTTCCATTGTAGCAGTGT 59.171 33.333 0.00 0.00 0.00 3.55
2134 2143 8.213518 AGTAACATATTTCCATTGTAGCAGTG 57.786 34.615 0.00 0.00 0.00 3.66
2135 2144 8.677300 CAAGTAACATATTTCCATTGTAGCAGT 58.323 33.333 0.00 0.00 0.00 4.40
2136 2145 8.131100 CCAAGTAACATATTTCCATTGTAGCAG 58.869 37.037 0.00 0.00 0.00 4.24
2137 2146 7.068103 CCCAAGTAACATATTTCCATTGTAGCA 59.932 37.037 0.00 0.00 0.00 3.49
2138 2147 7.284489 TCCCAAGTAACATATTTCCATTGTAGC 59.716 37.037 0.00 0.00 0.00 3.58
2139 2148 8.746052 TCCCAAGTAACATATTTCCATTGTAG 57.254 34.615 0.00 0.00 0.00 2.74
2140 2149 8.553153 TCTCCCAAGTAACATATTTCCATTGTA 58.447 33.333 0.00 0.00 0.00 2.41
2141 2150 7.410174 TCTCCCAAGTAACATATTTCCATTGT 58.590 34.615 0.00 0.00 0.00 2.71
2142 2151 7.880160 TCTCCCAAGTAACATATTTCCATTG 57.120 36.000 0.00 0.00 0.00 2.82
2143 2152 7.893302 TGTTCTCCCAAGTAACATATTTCCATT 59.107 33.333 0.00 0.00 0.00 3.16
2144 2153 7.410174 TGTTCTCCCAAGTAACATATTTCCAT 58.590 34.615 0.00 0.00 0.00 3.41
2145 2154 6.785076 TGTTCTCCCAAGTAACATATTTCCA 58.215 36.000 0.00 0.00 0.00 3.53
2146 2155 7.201821 CCATGTTCTCCCAAGTAACATATTTCC 60.202 40.741 0.00 0.00 40.83 3.13
2147 2156 7.556275 TCCATGTTCTCCCAAGTAACATATTTC 59.444 37.037 0.00 0.00 40.83 2.17
2148 2157 7.339466 GTCCATGTTCTCCCAAGTAACATATTT 59.661 37.037 0.00 0.00 40.83 1.40
2149 2158 6.828785 GTCCATGTTCTCCCAAGTAACATATT 59.171 38.462 0.00 0.00 40.83 1.28
2150 2159 6.357367 GTCCATGTTCTCCCAAGTAACATAT 58.643 40.000 0.00 0.00 40.83 1.78
2151 2160 5.625886 CGTCCATGTTCTCCCAAGTAACATA 60.626 44.000 0.00 0.00 40.83 2.29
2152 2161 4.589908 GTCCATGTTCTCCCAAGTAACAT 58.410 43.478 0.00 0.00 42.91 2.71
2153 2162 3.556213 CGTCCATGTTCTCCCAAGTAACA 60.556 47.826 0.00 0.00 37.51 2.41
2154 2163 3.000727 CGTCCATGTTCTCCCAAGTAAC 58.999 50.000 0.00 0.00 0.00 2.50
2155 2164 2.635915 ACGTCCATGTTCTCCCAAGTAA 59.364 45.455 0.00 0.00 0.00 2.24
2156 2165 2.253610 ACGTCCATGTTCTCCCAAGTA 58.746 47.619 0.00 0.00 0.00 2.24
2157 2166 1.056660 ACGTCCATGTTCTCCCAAGT 58.943 50.000 0.00 0.00 0.00 3.16
2158 2167 2.076863 GAACGTCCATGTTCTCCCAAG 58.923 52.381 4.66 0.00 43.82 3.61
2159 2168 2.178912 GAACGTCCATGTTCTCCCAA 57.821 50.000 4.66 0.00 43.82 4.12
2160 2169 3.927555 GAACGTCCATGTTCTCCCA 57.072 52.632 4.66 0.00 43.82 4.37
2165 2174 3.786635 AGCTATGAGAACGTCCATGTTC 58.213 45.455 3.79 3.79 46.78 3.18
2166 2175 3.895232 AGCTATGAGAACGTCCATGTT 57.105 42.857 7.91 0.00 34.02 2.71
2167 2176 3.895232 AAGCTATGAGAACGTCCATGT 57.105 42.857 7.91 0.00 0.00 3.21
2168 2177 3.738282 GCTAAGCTATGAGAACGTCCATG 59.262 47.826 7.91 0.00 0.00 3.66
2169 2178 3.551046 CGCTAAGCTATGAGAACGTCCAT 60.551 47.826 0.00 0.00 0.00 3.41
2170 2179 2.223502 CGCTAAGCTATGAGAACGTCCA 60.224 50.000 0.00 0.00 0.00 4.02
2171 2180 2.033049 TCGCTAAGCTATGAGAACGTCC 59.967 50.000 0.00 0.00 0.00 4.79
2172 2181 3.335786 TCGCTAAGCTATGAGAACGTC 57.664 47.619 0.00 0.00 0.00 4.34
2173 2182 3.992260 ATCGCTAAGCTATGAGAACGT 57.008 42.857 0.00 0.00 0.00 3.99
2174 2183 5.340932 CAGTAATCGCTAAGCTATGAGAACG 59.659 44.000 0.00 0.00 0.00 3.95
2175 2184 6.361214 GTCAGTAATCGCTAAGCTATGAGAAC 59.639 42.308 0.00 0.00 0.00 3.01
2176 2185 6.439599 GTCAGTAATCGCTAAGCTATGAGAA 58.560 40.000 0.00 0.00 0.00 2.87
2177 2186 5.048643 GGTCAGTAATCGCTAAGCTATGAGA 60.049 44.000 0.00 0.00 0.00 3.27
2178 2187 5.157781 GGTCAGTAATCGCTAAGCTATGAG 58.842 45.833 0.00 0.00 0.00 2.90
2179 2188 4.320275 CGGTCAGTAATCGCTAAGCTATGA 60.320 45.833 0.00 0.00 0.00 2.15
2180 2189 3.914966 CGGTCAGTAATCGCTAAGCTATG 59.085 47.826 0.00 0.00 0.00 2.23
2181 2190 3.568853 ACGGTCAGTAATCGCTAAGCTAT 59.431 43.478 0.00 0.00 0.00 2.97
2182 2191 2.947652 ACGGTCAGTAATCGCTAAGCTA 59.052 45.455 0.00 0.00 0.00 3.32
2183 2192 1.749634 ACGGTCAGTAATCGCTAAGCT 59.250 47.619 0.00 0.00 0.00 3.74
2184 2193 2.117910 GACGGTCAGTAATCGCTAAGC 58.882 52.381 2.62 0.00 0.00 3.09
2185 2194 2.373269 CGACGGTCAGTAATCGCTAAG 58.627 52.381 9.10 0.00 0.00 2.18
2186 2195 1.064505 CCGACGGTCAGTAATCGCTAA 59.935 52.381 5.48 0.00 33.25 3.09
2187 2196 0.659427 CCGACGGTCAGTAATCGCTA 59.341 55.000 5.48 0.00 33.25 4.26
2188 2197 1.028330 TCCGACGGTCAGTAATCGCT 61.028 55.000 14.79 0.00 33.25 4.93
2189 2198 0.030369 ATCCGACGGTCAGTAATCGC 59.970 55.000 14.79 0.00 33.25 4.58
2190 2199 1.334779 GGATCCGACGGTCAGTAATCG 60.335 57.143 14.79 0.00 0.00 3.34
2191 2200 1.334779 CGGATCCGACGGTCAGTAATC 60.335 57.143 30.62 8.07 42.83 1.75
2192 2201 0.666913 CGGATCCGACGGTCAGTAAT 59.333 55.000 30.62 0.00 42.83 1.89
2193 2202 0.677731 ACGGATCCGACGGTCAGTAA 60.678 55.000 39.55 0.00 42.83 2.24
2194 2203 0.677731 AACGGATCCGACGGTCAGTA 60.678 55.000 39.55 0.00 42.83 2.74
2195 2204 1.530013 AAACGGATCCGACGGTCAGT 61.530 55.000 39.55 12.74 42.83 3.41
2196 2205 0.389426 AAAACGGATCCGACGGTCAG 60.389 55.000 39.55 13.31 42.83 3.51
2197 2206 0.033781 AAAAACGGATCCGACGGTCA 59.966 50.000 39.55 0.00 42.83 4.02
2198 2207 2.831597 AAAAACGGATCCGACGGTC 58.168 52.632 39.55 10.57 42.83 4.79
2213 2222 1.879380 CAGTCCAGGACGCATCAAAAA 59.121 47.619 14.32 0.00 37.67 1.94
2214 2223 1.202758 ACAGTCCAGGACGCATCAAAA 60.203 47.619 14.32 0.00 37.67 2.44
2215 2224 0.396435 ACAGTCCAGGACGCATCAAA 59.604 50.000 14.32 0.00 37.67 2.69
2216 2225 0.396435 AACAGTCCAGGACGCATCAA 59.604 50.000 14.32 0.00 37.67 2.57
2217 2226 0.396435 AAACAGTCCAGGACGCATCA 59.604 50.000 14.32 0.00 37.67 3.07
2218 2227 0.798776 CAAACAGTCCAGGACGCATC 59.201 55.000 14.32 0.00 37.67 3.91
2219 2228 0.396435 TCAAACAGTCCAGGACGCAT 59.604 50.000 14.32 0.59 37.67 4.73
2220 2229 0.396435 ATCAAACAGTCCAGGACGCA 59.604 50.000 14.32 0.00 37.67 5.24
2221 2230 1.079503 GATCAAACAGTCCAGGACGC 58.920 55.000 14.32 0.00 37.67 5.19
2222 2231 2.611518 GAGATCAAACAGTCCAGGACG 58.388 52.381 14.32 11.39 37.67 4.79
2223 2232 2.355209 GGGAGATCAAACAGTCCAGGAC 60.355 54.545 12.25 12.25 0.00 3.85
2224 2233 1.909302 GGGAGATCAAACAGTCCAGGA 59.091 52.381 0.00 0.00 0.00 3.86
2225 2234 1.912043 AGGGAGATCAAACAGTCCAGG 59.088 52.381 0.00 0.00 0.00 4.45
2226 2235 2.093235 GGAGGGAGATCAAACAGTCCAG 60.093 54.545 0.00 0.00 0.00 3.86
2227 2236 1.909302 GGAGGGAGATCAAACAGTCCA 59.091 52.381 0.00 0.00 0.00 4.02
2228 2237 2.093235 CAGGAGGGAGATCAAACAGTCC 60.093 54.545 0.00 0.00 0.00 3.85
2229 2238 2.834549 TCAGGAGGGAGATCAAACAGTC 59.165 50.000 0.00 0.00 0.00 3.51
2230 2239 2.907892 TCAGGAGGGAGATCAAACAGT 58.092 47.619 0.00 0.00 0.00 3.55
2231 2240 3.492309 CGATCAGGAGGGAGATCAAACAG 60.492 52.174 0.00 0.00 40.45 3.16
2232 2241 2.432146 CGATCAGGAGGGAGATCAAACA 59.568 50.000 0.00 0.00 40.45 2.83
2233 2242 2.695666 TCGATCAGGAGGGAGATCAAAC 59.304 50.000 0.00 0.00 40.45 2.93
2234 2243 3.032265 TCGATCAGGAGGGAGATCAAA 57.968 47.619 0.00 0.00 40.45 2.69
2235 2244 2.755952 TCGATCAGGAGGGAGATCAA 57.244 50.000 0.00 0.00 40.45 2.57
2236 2245 2.988636 ATCGATCAGGAGGGAGATCA 57.011 50.000 0.00 0.00 40.45 2.92
2237 2246 3.563808 CGATATCGATCAGGAGGGAGATC 59.436 52.174 20.50 0.00 43.02 2.75
2238 2247 3.550820 CGATATCGATCAGGAGGGAGAT 58.449 50.000 20.50 0.00 43.02 2.75
2239 2248 2.356227 CCGATATCGATCAGGAGGGAGA 60.356 54.545 26.32 0.00 43.02 3.71
2240 2249 2.020720 CCGATATCGATCAGGAGGGAG 58.979 57.143 26.32 1.01 43.02 4.30
2241 2250 1.955683 GCCGATATCGATCAGGAGGGA 60.956 57.143 26.32 0.00 43.02 4.20
2242 2251 0.457851 GCCGATATCGATCAGGAGGG 59.542 60.000 26.32 7.23 43.02 4.30
2243 2252 0.457851 GGCCGATATCGATCAGGAGG 59.542 60.000 26.32 7.95 43.02 4.30
2244 2253 0.099613 CGGCCGATATCGATCAGGAG 59.900 60.000 26.32 8.68 43.02 3.69
2245 2254 0.608308 ACGGCCGATATCGATCAGGA 60.608 55.000 35.90 0.00 43.02 3.86
2246 2255 0.179161 GACGGCCGATATCGATCAGG 60.179 60.000 35.90 10.13 43.02 3.86
2247 2256 0.521450 CGACGGCCGATATCGATCAG 60.521 60.000 35.90 18.32 43.02 2.90
2248 2257 1.500396 CGACGGCCGATATCGATCA 59.500 57.895 35.90 0.00 43.02 2.92
2249 2258 1.226323 CCGACGGCCGATATCGATC 60.226 63.158 35.90 16.32 43.02 3.69
2250 2259 1.030488 ATCCGACGGCCGATATCGAT 61.030 55.000 35.90 20.77 43.02 3.59
2251 2260 1.642037 GATCCGACGGCCGATATCGA 61.642 60.000 35.90 19.52 43.02 3.59
2252 2261 1.226323 GATCCGACGGCCGATATCG 60.226 63.158 35.90 29.38 41.76 2.92
2253 2262 1.226323 CGATCCGACGGCCGATATC 60.226 63.158 35.90 24.19 41.76 1.63
2254 2263 1.673337 TCGATCCGACGGCCGATAT 60.673 57.895 35.90 18.56 41.76 1.63
2255 2264 2.281002 TCGATCCGACGGCCGATA 60.281 61.111 35.90 14.21 41.76 2.92
2256 2265 3.962421 GTCGATCCGACGGCCGAT 61.962 66.667 35.90 15.66 46.56 4.18
2266 2275 2.183555 GTGTCACCGGGTCGATCC 59.816 66.667 4.00 4.00 0.00 3.36
2267 2276 1.153823 CAGTGTCACCGGGTCGATC 60.154 63.158 6.32 0.00 0.00 3.69
2268 2277 2.970639 CAGTGTCACCGGGTCGAT 59.029 61.111 6.32 0.00 0.00 3.59
2269 2278 3.986006 GCAGTGTCACCGGGTCGA 61.986 66.667 6.32 0.00 0.00 4.20
2270 2279 2.632544 TAGCAGTGTCACCGGGTCG 61.633 63.158 6.32 0.00 0.00 4.79
2271 2280 1.080025 GTAGCAGTGTCACCGGGTC 60.080 63.158 6.32 0.00 0.00 4.46
2272 2281 1.404479 TTGTAGCAGTGTCACCGGGT 61.404 55.000 6.32 0.00 0.00 5.28
2273 2282 0.036388 ATTGTAGCAGTGTCACCGGG 60.036 55.000 6.32 0.00 0.00 5.73
2274 2283 1.078709 CATTGTAGCAGTGTCACCGG 58.921 55.000 0.00 0.00 0.00 5.28
2275 2284 2.078849 TCATTGTAGCAGTGTCACCG 57.921 50.000 0.00 0.00 0.00 4.94
2276 2285 3.138304 TGTTCATTGTAGCAGTGTCACC 58.862 45.455 0.00 0.00 0.00 4.02
2277 2286 3.809832 ACTGTTCATTGTAGCAGTGTCAC 59.190 43.478 0.00 0.00 40.24 3.67
2278 2287 4.058124 GACTGTTCATTGTAGCAGTGTCA 58.942 43.478 12.48 0.00 41.59 3.58
2279 2288 3.121944 CGACTGTTCATTGTAGCAGTGTC 59.878 47.826 12.48 0.00 41.59 3.67
2280 2289 3.059884 CGACTGTTCATTGTAGCAGTGT 58.940 45.455 12.48 0.00 41.59 3.55
2281 2290 2.413112 CCGACTGTTCATTGTAGCAGTG 59.587 50.000 12.48 0.00 41.59 3.66
2296 2305 0.602905 AAACGAGGGAAAGCCGACTG 60.603 55.000 0.00 0.00 33.83 3.51
2298 2307 0.516001 GAAAACGAGGGAAAGCCGAC 59.484 55.000 0.00 0.00 33.83 4.79
2301 2310 0.881796 CTGGAAAACGAGGGAAAGCC 59.118 55.000 0.00 0.00 0.00 4.35
2317 2327 4.607024 CGTGTGGAAAAACGCTGG 57.393 55.556 0.00 0.00 32.40 4.85
2328 2338 3.337889 CCATATCGCGGCGTGTGG 61.338 66.667 22.90 22.01 0.00 4.17
2342 2352 3.842923 CAGCGAGACGAGGGCCAT 61.843 66.667 6.18 0.00 0.00 4.40
2349 2359 4.056125 CACCCAGCAGCGAGACGA 62.056 66.667 0.00 0.00 0.00 4.20
2376 2386 2.772191 ACAGGTGTGGCCCACAGA 60.772 61.111 18.91 0.00 45.43 3.41
2378 2388 4.248842 CGACAGGTGTGGCCCACA 62.249 66.667 13.83 13.83 46.44 4.17
2435 2445 1.957186 GATATTTACCGCCCGCGCA 60.957 57.895 8.75 0.00 38.24 6.09
2468 2480 1.102978 GAATTAACAGGCGGTGGCAT 58.897 50.000 0.00 0.00 42.47 4.40
2521 2534 2.278466 CACGCAGCGCCACAAAAA 60.278 55.556 16.61 0.00 0.00 1.94
2556 2570 4.228567 GAGGAGTAGCCAGGCCGC 62.229 72.222 8.22 0.44 40.02 6.53
2559 2573 2.137528 GGAGGAGGAGTAGCCAGGC 61.138 68.421 1.84 1.84 40.02 4.85
2560 2574 1.458588 GGGAGGAGGAGTAGCCAGG 60.459 68.421 0.00 0.00 40.02 4.45
2561 2575 0.105246 ATGGGAGGAGGAGTAGCCAG 60.105 60.000 0.00 0.00 40.02 4.85
2565 2579 0.676736 GCGAATGGGAGGAGGAGTAG 59.323 60.000 0.00 0.00 0.00 2.57
2647 2714 1.682394 GCTGTTAGAGGAGGAGGACGA 60.682 57.143 0.00 0.00 0.00 4.20
2648 2715 0.741915 GCTGTTAGAGGAGGAGGACG 59.258 60.000 0.00 0.00 0.00 4.79
2649 2716 1.116308 GGCTGTTAGAGGAGGAGGAC 58.884 60.000 0.00 0.00 0.00 3.85
2650 2717 0.395862 CGGCTGTTAGAGGAGGAGGA 60.396 60.000 0.00 0.00 0.00 3.71
2651 2718 0.684805 ACGGCTGTTAGAGGAGGAGG 60.685 60.000 0.00 0.00 0.00 4.30
2652 2719 1.135333 GAACGGCTGTTAGAGGAGGAG 59.865 57.143 11.80 0.00 38.78 3.69
2653 2720 1.183549 GAACGGCTGTTAGAGGAGGA 58.816 55.000 11.80 0.00 38.78 3.71
2654 2721 0.179134 CGAACGGCTGTTAGAGGAGG 60.179 60.000 11.80 0.00 38.78 4.30
2655 2722 0.526662 ACGAACGGCTGTTAGAGGAG 59.473 55.000 23.28 8.33 38.78 3.69
2656 2723 0.524862 GACGAACGGCTGTTAGAGGA 59.475 55.000 23.28 0.00 38.78 3.71
2657 2724 0.458025 GGACGAACGGCTGTTAGAGG 60.458 60.000 23.28 10.39 38.78 3.69
2658 2725 0.526662 AGGACGAACGGCTGTTAGAG 59.473 55.000 23.28 14.38 38.78 2.43
2659 2726 0.524862 GAGGACGAACGGCTGTTAGA 59.475 55.000 23.28 0.00 38.78 2.10
2660 2727 0.458025 GGAGGACGAACGGCTGTTAG 60.458 60.000 11.80 14.21 38.78 2.34
2661 2728 0.896940 AGGAGGACGAACGGCTGTTA 60.897 55.000 11.80 0.00 38.78 2.41
2662 2729 2.156051 GAGGAGGACGAACGGCTGTT 62.156 60.000 11.62 11.62 42.23 3.16
2663 2730 2.600769 AGGAGGACGAACGGCTGT 60.601 61.111 0.00 0.00 0.00 4.40
2664 2731 2.182030 GAGGAGGACGAACGGCTG 59.818 66.667 0.00 0.00 0.00 4.85
2665 2732 3.441290 CGAGGAGGACGAACGGCT 61.441 66.667 0.00 0.00 0.00 5.52
2666 2733 4.493747 CCGAGGAGGACGAACGGC 62.494 72.222 0.00 0.00 45.00 5.68
2668 2735 2.178521 CACCGAGGAGGACGAACG 59.821 66.667 0.00 0.00 45.00 3.95
2669 2736 2.126031 GCACCGAGGAGGACGAAC 60.126 66.667 0.00 0.00 45.00 3.95
2670 2737 3.744719 CGCACCGAGGAGGACGAA 61.745 66.667 0.00 0.00 45.00 3.85
2723 2815 5.407407 AAGAGAAGAGGCGAATAGAACAA 57.593 39.130 0.00 0.00 0.00 2.83
2730 2822 3.870633 AACGTAAGAGAAGAGGCGAAT 57.129 42.857 0.00 0.00 43.62 3.34
2820 2912 2.561209 TAACTACCTGGGCCATCTCA 57.439 50.000 6.72 0.00 0.00 3.27
2847 2939 2.693250 GAACGCCCAGGCAAACAACC 62.693 60.000 9.78 0.00 42.06 3.77
2860 2952 0.384230 CACAACACATCACGAACGCC 60.384 55.000 0.00 0.00 0.00 5.68
2861 2953 0.991770 GCACAACACATCACGAACGC 60.992 55.000 0.00 0.00 0.00 4.84
2866 2958 2.250939 ACCCGCACAACACATCACG 61.251 57.895 0.00 0.00 0.00 4.35
2879 2971 1.648467 GAAATCAGTCCAGCACCCGC 61.648 60.000 0.00 0.00 38.99 6.13
2900 2993 0.403271 CCTAAGCAGATCCATGGGGG 59.597 60.000 13.02 0.01 38.37 5.40
2901 2994 1.143813 ACCTAAGCAGATCCATGGGG 58.856 55.000 13.02 3.99 0.00 4.96
2902 2995 3.303351 AAACCTAAGCAGATCCATGGG 57.697 47.619 13.02 0.00 0.00 4.00
2955 3048 3.197766 CCAGCTAGATAACCAGAACCACA 59.802 47.826 0.00 0.00 0.00 4.17
3000 3093 1.745320 AAACCAGCGAGACAGTCCGT 61.745 55.000 11.55 0.00 0.00 4.69
3004 3097 0.759346 AAGGAAACCAGCGAGACAGT 59.241 50.000 0.00 0.00 0.00 3.55
3005 3098 1.151668 CAAGGAAACCAGCGAGACAG 58.848 55.000 0.00 0.00 0.00 3.51
3035 3128 2.489275 GGCCAGGCGAGAGAGAGAG 61.489 68.421 5.00 0.00 0.00 3.20
3036 3129 2.441164 GGCCAGGCGAGAGAGAGA 60.441 66.667 5.00 0.00 0.00 3.10
3037 3130 2.015227 GAAGGCCAGGCGAGAGAGAG 62.015 65.000 5.01 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.