Multiple sequence alignment - TraesCS7A01G183000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G183000 chr7A 100.000 3175 0 0 1 3175 138013616 138010442 0.000000e+00 5864.0
1 TraesCS7A01G183000 chr7D 92.352 2079 95 28 576 2625 138039544 138037501 0.000000e+00 2900.0
2 TraesCS7A01G183000 chr7D 93.750 1376 64 14 997 2370 138086849 138085494 0.000000e+00 2045.0
3 TraesCS7A01G183000 chr7D 92.157 255 13 4 234 486 138088444 138088195 1.400000e-93 353.0
4 TraesCS7A01G183000 chr7D 94.444 36 2 0 227 262 138083942 138083907 4.420000e-04 56.5
5 TraesCS7A01G183000 chr5D 82.434 871 145 5 1298 2161 319138339 319137470 0.000000e+00 754.0
6 TraesCS7A01G183000 chr5D 88.178 516 61 0 1298 1813 318933840 318933325 1.620000e-172 616.0
7 TraesCS7A01G183000 chr5D 87.791 516 63 0 1298 1813 326904106 326904621 3.500000e-169 604.0
8 TraesCS7A01G183000 chr5D 88.283 367 39 2 1811 2175 318933235 318932871 1.350000e-118 436.0
9 TraesCS7A01G183000 chr5D 85.632 348 48 2 1808 2154 326904727 326905073 6.470000e-97 364.0
10 TraesCS7A01G183000 chr5D 90.678 118 11 0 1182 1299 318934036 318933919 1.180000e-34 158.0
11 TraesCS7A01G183000 chr5D 93.151 73 4 1 2386 2457 451008208 451008280 4.330000e-19 106.0
12 TraesCS7A01G183000 chr5D 86.765 68 9 0 1018 1085 326903743 326903810 3.400000e-10 76.8
13 TraesCS7A01G183000 chr7B 83.234 835 80 26 2263 3064 103509496 103508689 0.000000e+00 712.0
14 TraesCS7A01G183000 chr7B 88.931 262 19 5 227 486 103527128 103526875 6.610000e-82 315.0
15 TraesCS7A01G183000 chr5B 81.515 871 153 5 1298 2161 369154200 369153331 0.000000e+00 710.0
16 TraesCS7A01G183000 chr5B 89.147 516 56 0 1298 1813 368786738 368786223 0.000000e+00 643.0
17 TraesCS7A01G183000 chr5B 87.466 367 42 2 1811 2175 368786131 368785767 1.360000e-113 420.0
18 TraesCS7A01G183000 chr5B 90.678 118 11 0 1182 1299 368786934 368786817 1.180000e-34 158.0
19 TraesCS7A01G183000 chr5B 93.151 73 4 1 2386 2457 551227510 551227582 4.330000e-19 106.0
20 TraesCS7A01G183000 chr5B 90.000 60 6 0 1026 1085 379596902 379596961 9.440000e-11 78.7
21 TraesCS7A01G183000 chr5A 81.515 871 153 5 1298 2161 415355110 415355979 0.000000e+00 710.0
22 TraesCS7A01G183000 chr5A 88.178 516 61 0 1298 1813 415430856 415431371 1.620000e-172 616.0
23 TraesCS7A01G183000 chr5A 88.663 344 39 0 1811 2154 415431441 415431784 1.360000e-113 420.0
24 TraesCS7A01G183000 chr5A 91.525 118 10 0 1182 1299 415430659 415430776 2.530000e-36 163.0
25 TraesCS7A01G183000 chr5A 88.034 117 14 0 1183 1299 429656942 429656826 4.270000e-29 139.0
26 TraesCS7A01G183000 chr5A 90.141 71 6 1 2388 2457 25017025 25016955 1.210000e-14 91.6
27 TraesCS7A01G183000 chr5A 88.732 71 6 2 2387 2457 570234422 570234490 5.640000e-13 86.1
28 TraesCS7A01G183000 chr5A 86.441 59 8 0 1027 1085 429657096 429657038 7.350000e-07 65.8
29 TraesCS7A01G183000 chr1A 91.250 240 8 3 1 227 469782724 469782963 6.610000e-82 315.0
30 TraesCS7A01G183000 chr1A 90.456 241 9 7 1 227 127372789 127373029 3.980000e-79 305.0
31 TraesCS7A01G183000 chr1D 93.056 72 4 1 2387 2457 341179735 341179664 1.560000e-18 104.0
32 TraesCS7A01G183000 chr1D 83.333 96 10 4 2364 2457 64210663 64210572 2.030000e-12 84.2
33 TraesCS7A01G183000 chr1D 100.000 41 0 0 187 227 470914522 470914482 3.400000e-10 76.8
34 TraesCS7A01G183000 chr1B 84.259 108 12 5 2352 2457 302162023 302162127 2.020000e-17 100.0
35 TraesCS7A01G183000 chr2B 84.375 96 9 4 2364 2457 629974832 629974741 4.360000e-14 89.8
36 TraesCS7A01G183000 chr4B 81.416 113 15 5 3065 3175 658164712 658164604 1.570000e-13 87.9
37 TraesCS7A01G183000 chr4B 81.651 109 13 5 2352 2457 42063563 42063459 2.030000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G183000 chr7A 138010442 138013616 3174 True 5864.000000 5864 100.000000 1 3175 1 chr7A.!!$R1 3174
1 TraesCS7A01G183000 chr7D 138037501 138039544 2043 True 2900.000000 2900 92.352000 576 2625 1 chr7D.!!$R1 2049
2 TraesCS7A01G183000 chr7D 138083907 138088444 4537 True 818.166667 2045 93.450333 227 2370 3 chr7D.!!$R2 2143
3 TraesCS7A01G183000 chr5D 319137470 319138339 869 True 754.000000 754 82.434000 1298 2161 1 chr5D.!!$R1 863
4 TraesCS7A01G183000 chr5D 318932871 318934036 1165 True 403.333333 616 89.046333 1182 2175 3 chr5D.!!$R2 993
5 TraesCS7A01G183000 chr5D 326903743 326905073 1330 False 348.266667 604 86.729333 1018 2154 3 chr5D.!!$F2 1136
6 TraesCS7A01G183000 chr7B 103508689 103509496 807 True 712.000000 712 83.234000 2263 3064 1 chr7B.!!$R1 801
7 TraesCS7A01G183000 chr5B 369153331 369154200 869 True 710.000000 710 81.515000 1298 2161 1 chr5B.!!$R1 863
8 TraesCS7A01G183000 chr5B 368785767 368786934 1167 True 407.000000 643 89.097000 1182 2175 3 chr5B.!!$R2 993
9 TraesCS7A01G183000 chr5A 415355110 415355979 869 False 710.000000 710 81.515000 1298 2161 1 chr5A.!!$F1 863
10 TraesCS7A01G183000 chr5A 415430659 415431784 1125 False 399.666667 616 89.455333 1182 2154 3 chr5A.!!$F3 972

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
135 136 0.035739 GCCCACCTTACAGACCGAAA 59.964 55.0 0.00 0.00 0.00 3.46 F
236 237 0.110104 CCTCAAGGATGGGATCTGGC 59.890 60.0 0.00 0.00 37.39 4.85 F
364 365 0.301687 CGTGATTGCGCATAGTGGTC 59.698 55.0 12.75 3.74 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1202 2120 0.109086 AGAGCACCTTGATCGTCACG 60.109 55.000 0.00 0.0 37.94 4.35 R
1715 2745 1.154016 CGACGAGCTGATCACGGTT 60.154 57.895 8.79 0.0 32.98 4.44 R
2278 3421 1.365699 AAAAACAGCACTGACGACGT 58.634 45.000 0.00 0.0 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.997565 ACAACAAGTTTGTCACTCATTGG 58.002 39.130 0.00 0.00 41.31 3.16
28 29 4.704540 ACAACAAGTTTGTCACTCATTGGA 59.295 37.500 0.00 0.00 41.31 3.53
29 30 5.360714 ACAACAAGTTTGTCACTCATTGGAT 59.639 36.000 0.00 0.00 41.31 3.41
30 31 6.545666 ACAACAAGTTTGTCACTCATTGGATA 59.454 34.615 0.00 0.00 41.31 2.59
31 32 7.068103 ACAACAAGTTTGTCACTCATTGGATAA 59.932 33.333 0.00 0.00 41.31 1.75
32 33 6.970484 ACAAGTTTGTCACTCATTGGATAAC 58.030 36.000 0.00 0.00 36.50 1.89
33 34 6.545666 ACAAGTTTGTCACTCATTGGATAACA 59.454 34.615 0.00 0.00 36.50 2.41
34 35 7.231317 ACAAGTTTGTCACTCATTGGATAACAT 59.769 33.333 0.00 0.00 36.50 2.71
35 36 8.729756 CAAGTTTGTCACTCATTGGATAACATA 58.270 33.333 0.00 0.00 32.94 2.29
36 37 8.498054 AGTTTGTCACTCATTGGATAACATAG 57.502 34.615 0.00 0.00 0.00 2.23
37 38 6.925610 TTGTCACTCATTGGATAACATAGC 57.074 37.500 0.00 0.00 0.00 2.97
38 39 5.988287 TGTCACTCATTGGATAACATAGCA 58.012 37.500 0.00 0.00 0.00 3.49
39 40 6.413892 TGTCACTCATTGGATAACATAGCAA 58.586 36.000 0.00 0.00 0.00 3.91
40 41 6.883756 TGTCACTCATTGGATAACATAGCAAA 59.116 34.615 0.00 0.00 0.00 3.68
41 42 7.066163 TGTCACTCATTGGATAACATAGCAAAG 59.934 37.037 0.00 0.00 0.00 2.77
42 43 6.038603 TCACTCATTGGATAACATAGCAAAGC 59.961 38.462 0.00 0.00 0.00 3.51
43 44 5.300286 ACTCATTGGATAACATAGCAAAGCC 59.700 40.000 0.00 0.00 0.00 4.35
44 45 5.199723 TCATTGGATAACATAGCAAAGCCA 58.800 37.500 0.00 0.00 0.00 4.75
45 46 4.981806 TTGGATAACATAGCAAAGCCAC 57.018 40.909 0.00 0.00 0.00 5.01
46 47 3.961849 TGGATAACATAGCAAAGCCACA 58.038 40.909 0.00 0.00 0.00 4.17
47 48 3.947196 TGGATAACATAGCAAAGCCACAG 59.053 43.478 0.00 0.00 0.00 3.66
48 49 4.199310 GGATAACATAGCAAAGCCACAGA 58.801 43.478 0.00 0.00 0.00 3.41
49 50 4.640201 GGATAACATAGCAAAGCCACAGAA 59.360 41.667 0.00 0.00 0.00 3.02
50 51 5.220931 GGATAACATAGCAAAGCCACAGAAG 60.221 44.000 0.00 0.00 0.00 2.85
51 52 2.440409 ACATAGCAAAGCCACAGAAGG 58.560 47.619 0.00 0.00 0.00 3.46
52 53 1.747355 CATAGCAAAGCCACAGAAGGG 59.253 52.381 0.00 0.00 0.00 3.95
53 54 0.038166 TAGCAAAGCCACAGAAGGGG 59.962 55.000 0.00 0.00 0.00 4.79
54 55 1.531602 GCAAAGCCACAGAAGGGGT 60.532 57.895 0.00 0.00 37.86 4.95
56 57 0.961753 CAAAGCCACAGAAGGGGTTC 59.038 55.000 0.00 0.00 44.84 3.62
57 58 0.555769 AAAGCCACAGAAGGGGTTCA 59.444 50.000 0.00 0.00 44.84 3.18
58 59 0.178990 AAGCCACAGAAGGGGTTCAC 60.179 55.000 0.00 0.00 42.10 3.18
59 60 1.062488 AGCCACAGAAGGGGTTCACT 61.062 55.000 0.00 0.00 30.45 3.41
60 61 0.178990 GCCACAGAAGGGGTTCACTT 60.179 55.000 0.00 0.00 0.00 3.16
61 62 1.609208 CCACAGAAGGGGTTCACTTG 58.391 55.000 0.00 0.00 0.00 3.16
62 63 0.954452 CACAGAAGGGGTTCACTTGC 59.046 55.000 0.00 0.00 0.00 4.01
63 64 0.178990 ACAGAAGGGGTTCACTTGCC 60.179 55.000 0.00 0.00 0.00 4.52
64 65 0.178992 CAGAAGGGGTTCACTTGCCA 60.179 55.000 0.00 0.00 0.00 4.92
65 66 0.111253 AGAAGGGGTTCACTTGCCAG 59.889 55.000 0.00 0.00 0.00 4.85
66 67 1.527433 GAAGGGGTTCACTTGCCAGC 61.527 60.000 0.00 0.00 0.00 4.85
67 68 3.365265 GGGGTTCACTTGCCAGCG 61.365 66.667 0.00 0.00 0.00 5.18
68 69 4.043200 GGGTTCACTTGCCAGCGC 62.043 66.667 0.00 0.00 0.00 5.92
69 70 3.286751 GGTTCACTTGCCAGCGCA 61.287 61.111 11.47 0.00 45.49 6.09
86 87 3.056952 CGCAAGCCATAATTCACACTC 57.943 47.619 0.00 0.00 0.00 3.51
87 88 2.419673 CGCAAGCCATAATTCACACTCA 59.580 45.455 0.00 0.00 0.00 3.41
88 89 3.486375 CGCAAGCCATAATTCACACTCAG 60.486 47.826 0.00 0.00 0.00 3.35
89 90 3.691118 GCAAGCCATAATTCACACTCAGA 59.309 43.478 0.00 0.00 0.00 3.27
90 91 4.201891 GCAAGCCATAATTCACACTCAGAG 60.202 45.833 0.00 0.00 0.00 3.35
91 92 4.148128 AGCCATAATTCACACTCAGAGG 57.852 45.455 1.53 0.00 0.00 3.69
92 93 2.615912 GCCATAATTCACACTCAGAGGC 59.384 50.000 1.53 0.00 0.00 4.70
93 94 3.877559 CCATAATTCACACTCAGAGGCA 58.122 45.455 1.53 0.00 0.00 4.75
94 95 4.264253 CCATAATTCACACTCAGAGGCAA 58.736 43.478 1.53 0.00 0.00 4.52
95 96 4.701651 CCATAATTCACACTCAGAGGCAAA 59.298 41.667 1.53 0.00 0.00 3.68
96 97 5.359009 CCATAATTCACACTCAGAGGCAAAT 59.641 40.000 1.53 0.00 0.00 2.32
97 98 4.778534 AATTCACACTCAGAGGCAAATG 57.221 40.909 1.53 0.00 0.00 2.32
98 99 2.189594 TCACACTCAGAGGCAAATGG 57.810 50.000 1.53 0.00 0.00 3.16
99 100 0.524862 CACACTCAGAGGCAAATGGC 59.475 55.000 1.53 0.00 43.74 4.40
100 101 0.957395 ACACTCAGAGGCAAATGGCG 60.957 55.000 1.53 0.00 46.16 5.69
101 102 2.042831 ACTCAGAGGCAAATGGCGC 61.043 57.895 0.00 0.00 46.16 6.53
102 103 2.033911 TCAGAGGCAAATGGCGCA 59.966 55.556 10.83 0.00 46.16 6.09
103 104 1.588824 CTCAGAGGCAAATGGCGCAA 61.589 55.000 10.83 0.00 46.16 4.85
104 105 1.444895 CAGAGGCAAATGGCGCAAC 60.445 57.895 10.83 0.00 46.16 4.17
105 106 1.902918 AGAGGCAAATGGCGCAACA 60.903 52.632 10.83 0.00 46.16 3.33
106 107 1.444895 GAGGCAAATGGCGCAACAG 60.445 57.895 10.83 0.00 46.16 3.16
107 108 2.146073 GAGGCAAATGGCGCAACAGT 62.146 55.000 10.83 0.00 46.16 3.55
108 109 0.893270 AGGCAAATGGCGCAACAGTA 60.893 50.000 10.83 0.00 46.16 2.74
109 110 0.456653 GGCAAATGGCGCAACAGTAG 60.457 55.000 10.83 0.00 46.16 2.57
110 111 0.240945 GCAAATGGCGCAACAGTAGT 59.759 50.000 10.83 0.00 0.00 2.73
111 112 1.967762 CAAATGGCGCAACAGTAGTG 58.032 50.000 10.83 0.00 0.00 2.74
112 113 1.266718 CAAATGGCGCAACAGTAGTGT 59.733 47.619 10.83 0.00 39.19 3.55
113 114 0.874390 AATGGCGCAACAGTAGTGTG 59.126 50.000 10.83 0.12 36.84 3.82
114 115 1.577328 ATGGCGCAACAGTAGTGTGC 61.577 55.000 10.83 9.16 36.84 4.57
115 116 2.250939 GGCGCAACAGTAGTGTGCA 61.251 57.895 10.83 0.00 40.42 4.57
116 117 1.205064 GCGCAACAGTAGTGTGCAG 59.795 57.895 18.76 14.04 36.84 4.41
117 118 1.205064 CGCAACAGTAGTGTGCAGC 59.795 57.895 18.76 15.18 36.84 5.25
118 119 1.576421 GCAACAGTAGTGTGCAGCC 59.424 57.895 3.39 0.00 36.84 4.85
119 120 1.856265 GCAACAGTAGTGTGCAGCCC 61.856 60.000 3.39 0.00 36.84 5.19
120 121 0.534877 CAACAGTAGTGTGCAGCCCA 60.535 55.000 3.39 0.00 36.84 5.36
121 122 0.535102 AACAGTAGTGTGCAGCCCAC 60.535 55.000 3.39 0.00 44.90 4.61
122 123 1.672356 CAGTAGTGTGCAGCCCACC 60.672 63.158 4.14 0.00 44.01 4.61
123 124 1.843376 AGTAGTGTGCAGCCCACCT 60.843 57.895 4.14 0.00 44.01 4.00
124 125 1.073199 GTAGTGTGCAGCCCACCTT 59.927 57.895 4.14 0.00 44.01 3.50
125 126 0.323629 GTAGTGTGCAGCCCACCTTA 59.676 55.000 4.14 0.00 44.01 2.69
126 127 0.323629 TAGTGTGCAGCCCACCTTAC 59.676 55.000 4.14 0.00 44.01 2.34
127 128 1.228124 GTGTGCAGCCCACCTTACA 60.228 57.895 0.00 0.00 44.01 2.41
128 129 1.073025 TGTGCAGCCCACCTTACAG 59.927 57.895 0.00 0.00 44.01 2.74
129 130 1.374947 GTGCAGCCCACCTTACAGA 59.625 57.895 0.00 0.00 38.55 3.41
130 131 0.955919 GTGCAGCCCACCTTACAGAC 60.956 60.000 0.00 0.00 38.55 3.51
131 132 1.377333 GCAGCCCACCTTACAGACC 60.377 63.158 0.00 0.00 0.00 3.85
132 133 1.079127 CAGCCCACCTTACAGACCG 60.079 63.158 0.00 0.00 0.00 4.79
133 134 1.229082 AGCCCACCTTACAGACCGA 60.229 57.895 0.00 0.00 0.00 4.69
134 135 0.834687 AGCCCACCTTACAGACCGAA 60.835 55.000 0.00 0.00 0.00 4.30
135 136 0.035739 GCCCACCTTACAGACCGAAA 59.964 55.000 0.00 0.00 0.00 3.46
136 137 1.944430 GCCCACCTTACAGACCGAAAG 60.944 57.143 0.00 0.00 0.00 2.62
137 138 1.346722 CCCACCTTACAGACCGAAAGT 59.653 52.381 0.00 0.00 0.00 2.66
138 139 2.224450 CCCACCTTACAGACCGAAAGTT 60.224 50.000 0.00 0.00 0.00 2.66
139 140 3.064931 CCACCTTACAGACCGAAAGTTC 58.935 50.000 0.00 0.00 0.00 3.01
140 141 3.493699 CCACCTTACAGACCGAAAGTTCA 60.494 47.826 0.00 0.00 0.00 3.18
141 142 3.741344 CACCTTACAGACCGAAAGTTCAG 59.259 47.826 0.00 0.00 0.00 3.02
142 143 3.640029 ACCTTACAGACCGAAAGTTCAGA 59.360 43.478 0.00 0.00 0.00 3.27
143 144 4.100498 ACCTTACAGACCGAAAGTTCAGAA 59.900 41.667 0.00 0.00 0.00 3.02
144 145 5.221661 ACCTTACAGACCGAAAGTTCAGAAT 60.222 40.000 0.00 0.00 0.00 2.40
145 146 5.701290 CCTTACAGACCGAAAGTTCAGAATT 59.299 40.000 0.00 0.00 0.00 2.17
146 147 6.204882 CCTTACAGACCGAAAGTTCAGAATTT 59.795 38.462 0.00 0.00 0.00 1.82
147 148 5.424121 ACAGACCGAAAGTTCAGAATTTG 57.576 39.130 0.00 0.00 0.00 2.32
148 149 5.123227 ACAGACCGAAAGTTCAGAATTTGA 58.877 37.500 0.00 0.00 0.00 2.69
149 150 5.007724 ACAGACCGAAAGTTCAGAATTTGAC 59.992 40.000 0.00 0.00 34.94 3.18
150 151 5.237344 CAGACCGAAAGTTCAGAATTTGACT 59.763 40.000 0.00 0.00 34.94 3.41
151 152 6.423905 CAGACCGAAAGTTCAGAATTTGACTA 59.576 38.462 0.00 0.00 34.94 2.59
152 153 6.990349 AGACCGAAAGTTCAGAATTTGACTAA 59.010 34.615 0.00 0.00 34.94 2.24
153 154 7.661847 AGACCGAAAGTTCAGAATTTGACTAAT 59.338 33.333 0.00 0.00 34.94 1.73
154 155 7.807680 ACCGAAAGTTCAGAATTTGACTAATC 58.192 34.615 0.00 0.00 34.94 1.75
155 156 7.444183 ACCGAAAGTTCAGAATTTGACTAATCA 59.556 33.333 0.00 0.00 34.94 2.57
156 157 8.454106 CCGAAAGTTCAGAATTTGACTAATCAT 58.546 33.333 0.00 0.00 34.94 2.45
157 158 9.270576 CGAAAGTTCAGAATTTGACTAATCATG 57.729 33.333 0.00 0.00 34.94 3.07
158 159 9.565213 GAAAGTTCAGAATTTGACTAATCATGG 57.435 33.333 0.00 0.00 34.94 3.66
159 160 8.868522 AAGTTCAGAATTTGACTAATCATGGA 57.131 30.769 0.00 0.00 34.94 3.41
160 161 8.868522 AGTTCAGAATTTGACTAATCATGGAA 57.131 30.769 0.00 0.00 34.94 3.53
161 162 9.300681 AGTTCAGAATTTGACTAATCATGGAAA 57.699 29.630 0.00 0.00 34.94 3.13
162 163 9.346725 GTTCAGAATTTGACTAATCATGGAAAC 57.653 33.333 0.00 0.00 34.94 2.78
163 164 8.868522 TCAGAATTTGACTAATCATGGAAACT 57.131 30.769 0.00 0.00 33.85 2.66
164 165 8.733458 TCAGAATTTGACTAATCATGGAAACTG 58.267 33.333 0.00 0.00 33.85 3.16
165 166 7.972277 CAGAATTTGACTAATCATGGAAACTGG 59.028 37.037 0.00 0.00 33.85 4.00
166 167 7.890127 AGAATTTGACTAATCATGGAAACTGGA 59.110 33.333 0.00 0.00 33.85 3.86
167 168 7.636150 ATTTGACTAATCATGGAAACTGGAG 57.364 36.000 0.00 0.00 33.85 3.86
168 169 5.762179 TGACTAATCATGGAAACTGGAGT 57.238 39.130 0.00 0.00 0.00 3.85
169 170 6.867519 TGACTAATCATGGAAACTGGAGTA 57.132 37.500 0.00 0.00 0.00 2.59
170 171 7.252612 TGACTAATCATGGAAACTGGAGTAA 57.747 36.000 0.00 0.00 0.00 2.24
171 172 7.103641 TGACTAATCATGGAAACTGGAGTAAC 58.896 38.462 0.00 0.00 0.00 2.50
172 173 7.016153 ACTAATCATGGAAACTGGAGTAACA 57.984 36.000 0.00 0.00 0.00 2.41
173 174 7.458397 ACTAATCATGGAAACTGGAGTAACAA 58.542 34.615 0.00 0.00 0.00 2.83
174 175 6.575162 AATCATGGAAACTGGAGTAACAAC 57.425 37.500 0.00 0.00 0.00 3.32
175 176 5.042463 TCATGGAAACTGGAGTAACAACA 57.958 39.130 0.00 0.00 0.00 3.33
176 177 5.063204 TCATGGAAACTGGAGTAACAACAG 58.937 41.667 0.00 0.00 38.19 3.16
177 178 4.764050 TGGAAACTGGAGTAACAACAGA 57.236 40.909 0.00 0.00 36.17 3.41
178 179 5.304686 TGGAAACTGGAGTAACAACAGAT 57.695 39.130 0.00 0.00 36.17 2.90
179 180 6.428083 TGGAAACTGGAGTAACAACAGATA 57.572 37.500 0.00 0.00 36.17 1.98
180 181 7.016153 TGGAAACTGGAGTAACAACAGATAT 57.984 36.000 0.00 0.00 36.17 1.63
181 182 8.141298 TGGAAACTGGAGTAACAACAGATATA 57.859 34.615 0.00 0.00 36.17 0.86
182 183 8.598916 TGGAAACTGGAGTAACAACAGATATAA 58.401 33.333 0.00 0.00 36.17 0.98
183 184 9.099454 GGAAACTGGAGTAACAACAGATATAAG 57.901 37.037 0.00 0.00 36.17 1.73
184 185 9.654663 GAAACTGGAGTAACAACAGATATAAGT 57.345 33.333 0.00 0.00 36.17 2.24
187 188 8.414778 ACTGGAGTAACAACAGATATAAGTAGC 58.585 37.037 0.00 0.00 36.17 3.58
188 189 7.423199 TGGAGTAACAACAGATATAAGTAGCG 58.577 38.462 0.00 0.00 0.00 4.26
189 190 6.362820 GGAGTAACAACAGATATAAGTAGCGC 59.637 42.308 0.00 0.00 0.00 5.92
190 191 6.802608 AGTAACAACAGATATAAGTAGCGCA 58.197 36.000 11.47 0.00 0.00 6.09
191 192 6.918569 AGTAACAACAGATATAAGTAGCGCAG 59.081 38.462 11.47 0.00 0.00 5.18
228 229 0.758123 GGAGAGCTCCTCAAGGATGG 59.242 60.000 10.93 0.00 46.16 3.51
229 230 0.758123 GAGAGCTCCTCAAGGATGGG 59.242 60.000 10.93 0.00 44.46 4.00
230 231 0.341258 AGAGCTCCTCAAGGATGGGA 59.659 55.000 10.93 0.00 44.46 4.37
231 232 1.061502 AGAGCTCCTCAAGGATGGGAT 60.062 52.381 10.93 0.00 44.46 3.85
232 233 1.347378 GAGCTCCTCAAGGATGGGATC 59.653 57.143 0.87 0.00 44.46 3.36
233 234 1.061502 AGCTCCTCAAGGATGGGATCT 60.062 52.381 0.00 0.00 44.46 2.75
234 235 1.072015 GCTCCTCAAGGATGGGATCTG 59.928 57.143 0.00 0.00 44.46 2.90
235 236 1.698532 CTCCTCAAGGATGGGATCTGG 59.301 57.143 0.00 0.00 44.46 3.86
236 237 0.110104 CCTCAAGGATGGGATCTGGC 59.890 60.000 0.00 0.00 37.39 4.85
237 238 1.138568 CTCAAGGATGGGATCTGGCT 58.861 55.000 0.00 0.00 0.00 4.75
238 239 1.493871 CTCAAGGATGGGATCTGGCTT 59.506 52.381 0.00 0.00 0.00 4.35
239 240 1.925255 TCAAGGATGGGATCTGGCTTT 59.075 47.619 0.00 0.00 0.00 3.51
240 241 2.029623 CAAGGATGGGATCTGGCTTTG 58.970 52.381 0.00 0.00 0.00 2.77
241 242 1.600058 AGGATGGGATCTGGCTTTGA 58.400 50.000 0.00 0.00 0.00 2.69
242 243 2.141911 AGGATGGGATCTGGCTTTGAT 58.858 47.619 0.00 0.00 0.00 2.57
243 244 2.107901 AGGATGGGATCTGGCTTTGATC 59.892 50.000 0.00 7.02 39.49 2.92
244 245 2.149578 GATGGGATCTGGCTTTGATCG 58.850 52.381 0.00 0.00 40.71 3.69
260 261 2.887783 TGATCGATAAGCCTCACTCCTC 59.112 50.000 0.00 0.00 0.00 3.71
310 311 1.343465 ACGAGTTCAGACCGGACAAAT 59.657 47.619 9.46 0.00 0.00 2.32
324 325 3.540617 GGACAAATTTTGGTTGGCAACT 58.459 40.909 27.77 6.78 35.56 3.16
327 328 4.842574 ACAAATTTTGGTTGGCAACTTCT 58.157 34.783 27.77 7.79 34.12 2.85
332 333 7.929941 AATTTTGGTTGGCAACTTCTTTTTA 57.070 28.000 27.77 7.89 37.61 1.52
333 334 8.518430 AATTTTGGTTGGCAACTTCTTTTTAT 57.482 26.923 27.77 9.60 37.61 1.40
336 337 9.449719 TTTTGGTTGGCAACTTCTTTTTATTTA 57.550 25.926 27.77 0.14 37.61 1.40
350 351 5.941555 TTTTATTTAAATGGGGGCGTGAT 57.058 34.783 11.05 0.00 0.00 3.06
353 354 0.820871 TTAAATGGGGGCGTGATTGC 59.179 50.000 0.00 0.00 0.00 3.56
364 365 0.301687 CGTGATTGCGCATAGTGGTC 59.698 55.000 12.75 3.74 0.00 4.02
387 388 4.439153 CCACATGCATGTTGAGTGGTATTC 60.439 45.833 29.48 0.00 43.57 1.75
390 391 6.261603 CACATGCATGTTGAGTGGTATTCTAT 59.738 38.462 29.48 0.00 39.39 1.98
450 451 7.442656 AGCACTTGTATTGTAAGTAAGAGTGT 58.557 34.615 0.00 0.00 36.29 3.55
452 453 8.861101 GCACTTGTATTGTAAGTAAGAGTGTAG 58.139 37.037 0.00 0.00 36.29 2.74
458 459 9.991388 GTATTGTAAGTAAGAGTGTAGACAGAG 57.009 37.037 0.00 0.00 0.00 3.35
492 511 9.394477 CTTTTTAAAGTTCGAATTGGTTAGGAG 57.606 33.333 0.00 0.00 0.00 3.69
526 545 3.992427 GAGTAGGGTGTGTTAAAGTTCCG 59.008 47.826 0.00 0.00 0.00 4.30
527 546 3.642848 AGTAGGGTGTGTTAAAGTTCCGA 59.357 43.478 0.00 0.00 0.00 4.55
528 547 2.842457 AGGGTGTGTTAAAGTTCCGAC 58.158 47.619 0.00 0.00 0.00 4.79
529 548 1.528161 GGGTGTGTTAAAGTTCCGACG 59.472 52.381 0.00 0.00 0.00 5.12
530 549 2.472816 GGTGTGTTAAAGTTCCGACGA 58.527 47.619 0.00 0.00 0.00 4.20
531 550 2.865551 GGTGTGTTAAAGTTCCGACGAA 59.134 45.455 0.00 0.00 0.00 3.85
532 551 3.309410 GGTGTGTTAAAGTTCCGACGAAA 59.691 43.478 0.00 0.00 0.00 3.46
533 552 4.201802 GGTGTGTTAAAGTTCCGACGAAAA 60.202 41.667 0.00 0.00 0.00 2.29
535 554 5.450066 GTGTGTTAAAGTTCCGACGAAAAAG 59.550 40.000 0.00 0.00 0.00 2.27
540 816 2.752121 AGTTCCGACGAAAAAGTCTCC 58.248 47.619 0.00 0.00 38.90 3.71
544 820 1.792949 CCGACGAAAAAGTCTCCACTG 59.207 52.381 0.00 0.00 38.90 3.66
561 837 1.961394 ACTGGTTTGACGTGAGAGCTA 59.039 47.619 0.00 0.00 0.00 3.32
563 839 2.926200 CTGGTTTGACGTGAGAGCTATG 59.074 50.000 0.00 0.00 0.00 2.23
619 895 2.607635 CTGAAATAAGTACGCGTGCCAT 59.392 45.455 24.59 15.14 0.00 4.40
752 1028 3.121030 GGCCTACAGCACTGCGTG 61.121 66.667 0.00 4.61 46.50 5.34
785 1061 6.632765 CGTTCTTCACGGTTTTTAAAAATGG 58.367 36.000 16.02 12.88 45.89 3.16
811 1087 1.062488 AAGCCGCCCCATATCCTTCT 61.062 55.000 0.00 0.00 0.00 2.85
992 1909 2.409870 GGCACGGCAGGATCAAAGG 61.410 63.158 0.00 0.00 0.00 3.11
1143 2061 4.011023 ACTAGCTAGTGACAGTGTGGTAG 58.989 47.826 25.52 7.83 34.72 3.18
1144 2062 2.877866 AGCTAGTGACAGTGTGGTAGT 58.122 47.619 0.00 0.00 0.00 2.73
1145 2063 2.558795 AGCTAGTGACAGTGTGGTAGTG 59.441 50.000 0.00 0.00 35.76 2.74
1147 2065 1.789523 AGTGACAGTGTGGTAGTGGT 58.210 50.000 0.00 0.00 33.84 4.16
1148 2066 2.953453 AGTGACAGTGTGGTAGTGGTA 58.047 47.619 0.00 0.00 33.84 3.25
1176 2094 0.663153 GCTCAGCTCGTTGTGGTTTT 59.337 50.000 0.00 0.00 0.00 2.43
1180 2098 3.128349 TCAGCTCGTTGTGGTTTTACTC 58.872 45.455 0.00 0.00 0.00 2.59
1202 2120 1.513622 GGCTCAGAAGGAGGACGAC 59.486 63.158 0.00 0.00 44.22 4.34
1709 2739 3.202706 GGCAAGGCGTTCGGGATC 61.203 66.667 0.00 0.00 0.00 3.36
1715 2745 2.491152 GCGTTCGGGATCACGGTA 59.509 61.111 18.99 2.95 36.88 4.02
2223 3366 2.544480 TACTCACGATGAAGCAGTCG 57.456 50.000 0.00 0.00 43.13 4.18
2248 3391 4.151689 CGACACGTGAAGTCATAATTTGGT 59.848 41.667 25.01 0.00 35.77 3.67
2254 3397 5.624900 CGTGAAGTCATAATTTGGTTGTGTG 59.375 40.000 0.00 0.00 31.53 3.82
2255 3398 6.503524 GTGAAGTCATAATTTGGTTGTGTGT 58.496 36.000 0.00 0.00 31.53 3.72
2256 3399 6.417635 GTGAAGTCATAATTTGGTTGTGTGTG 59.582 38.462 0.00 0.00 31.53 3.82
2257 3400 6.096141 TGAAGTCATAATTTGGTTGTGTGTGT 59.904 34.615 0.00 0.00 31.53 3.72
2278 3421 5.295787 GTGTTGTGATTTCAGTGAGTTGGTA 59.704 40.000 0.00 0.00 0.00 3.25
2282 3425 4.150098 GTGATTTCAGTGAGTTGGTACGTC 59.850 45.833 0.00 0.00 0.00 4.34
2348 3493 9.320295 AGCAAGAAGTTCTTATCCTATATAGCT 57.680 33.333 17.62 14.19 33.78 3.32
2380 3525 5.734634 AGGTCACCCCACTACCTTATTTATT 59.265 40.000 0.00 0.00 40.82 1.40
2412 3972 2.840038 TGACTATGCCACCTCATCAACT 59.160 45.455 0.00 0.00 0.00 3.16
2413 3973 4.030216 TGACTATGCCACCTCATCAACTA 58.970 43.478 0.00 0.00 0.00 2.24
2468 4033 7.657761 GCATGAAAATGCTACTACCTACACTAT 59.342 37.037 0.00 0.00 43.79 2.12
2475 4040 8.624367 ATGCTACTACCTACACTATAGTCTTG 57.376 38.462 1.26 0.00 31.65 3.02
2476 4041 6.485984 TGCTACTACCTACACTATAGTCTTGC 59.514 42.308 1.26 0.00 31.65 4.01
2478 4043 7.877097 GCTACTACCTACACTATAGTCTTGCTA 59.123 40.741 1.26 0.00 31.65 3.49
2603 5105 4.822026 AGATTTGGTTAAGTCTCACTCGG 58.178 43.478 0.00 0.00 27.74 4.63
2614 5116 1.004394 TCTCACTCGGCTGAGACCTAA 59.996 52.381 29.29 7.36 45.57 2.69
2619 5121 2.290768 ACTCGGCTGAGACCTAACTACA 60.291 50.000 29.29 0.00 45.57 2.74
2644 5146 6.659824 CCCTATTTATAAACAGAGGGTGTGT 58.340 40.000 22.67 0.95 40.26 3.72
2645 5147 7.798071 CCCTATTTATAAACAGAGGGTGTGTA 58.202 38.462 22.67 1.86 40.26 2.90
2646 5148 8.437575 CCCTATTTATAAACAGAGGGTGTGTAT 58.562 37.037 22.67 0.00 41.72 2.29
2647 5149 9.273016 CCTATTTATAAACAGAGGGTGTGTATG 57.727 37.037 5.03 0.00 39.57 2.39
2648 5150 9.832445 CTATTTATAAACAGAGGGTGTGTATGT 57.168 33.333 0.00 0.00 39.57 2.29
2650 5152 9.609346 ATTTATAAACAGAGGGTGTGTATGTAC 57.391 33.333 0.00 0.00 39.57 2.90
2651 5153 4.967084 AAACAGAGGGTGTGTATGTACA 57.033 40.909 0.00 0.00 40.26 2.90
2652 5154 4.967084 AACAGAGGGTGTGTATGTACAA 57.033 40.909 0.00 0.00 40.26 2.41
2653 5155 4.537135 ACAGAGGGTGTGTATGTACAAG 57.463 45.455 0.00 0.00 38.28 3.16
2654 5156 4.157246 ACAGAGGGTGTGTATGTACAAGA 58.843 43.478 0.00 0.00 38.28 3.02
2655 5157 4.591498 ACAGAGGGTGTGTATGTACAAGAA 59.409 41.667 0.00 0.00 38.28 2.52
2656 5158 5.071250 ACAGAGGGTGTGTATGTACAAGAAA 59.929 40.000 0.00 0.00 38.28 2.52
2657 5159 5.995282 CAGAGGGTGTGTATGTACAAGAAAA 59.005 40.000 0.00 0.00 38.04 2.29
2658 5160 6.485313 CAGAGGGTGTGTATGTACAAGAAAAA 59.515 38.462 0.00 0.00 38.04 1.94
2659 5161 6.710744 AGAGGGTGTGTATGTACAAGAAAAAG 59.289 38.462 0.00 0.00 38.04 2.27
2660 5162 6.362248 AGGGTGTGTATGTACAAGAAAAAGT 58.638 36.000 0.00 0.00 38.04 2.66
2668 5170 9.263538 TGTATGTACAAGAAAAAGTCGTACAAT 57.736 29.630 0.00 0.00 43.88 2.71
2704 5206 6.454795 AGAGAACAAAAGAAACAAAACTGCA 58.545 32.000 0.00 0.00 0.00 4.41
2731 5234 8.378565 AGTTAGCTGGCATATATAGTTTGATGT 58.621 33.333 0.00 0.00 0.00 3.06
2755 5258 1.150536 ACAAGCACACCCGTTGGAT 59.849 52.632 0.00 0.00 34.81 3.41
2768 5271 1.531149 CGTTGGATCAAAACTCACGCT 59.469 47.619 8.40 0.00 0.00 5.07
2772 5275 2.143122 GGATCAAAACTCACGCTGTGA 58.857 47.619 10.24 10.24 40.50 3.58
2780 5283 2.341257 ACTCACGCTGTGATTCATGTC 58.659 47.619 10.93 0.00 41.94 3.06
2795 5298 0.670546 ATGTCGTGGCCTCAAGAACG 60.671 55.000 3.32 4.17 33.48 3.95
2830 5333 3.620821 CCATGTTGGCTTGTTTTCGTTTT 59.379 39.130 0.00 0.00 0.00 2.43
2832 5335 2.917971 TGTTGGCTTGTTTTCGTTTTCG 59.082 40.909 0.00 0.00 45.64 3.46
2849 5352 2.001812 TCGCTCTCAGCTCATGTTTC 57.998 50.000 0.00 0.00 39.60 2.78
2855 5358 2.373169 TCTCAGCTCATGTTTCAGGGTT 59.627 45.455 0.00 0.00 0.00 4.11
2859 5362 3.057736 CAGCTCATGTTTCAGGGTTTGAG 60.058 47.826 0.00 0.00 37.07 3.02
2898 5401 2.281762 GGCGACACTAGCTTTTGTATCG 59.718 50.000 9.47 9.47 34.52 2.92
2902 5405 5.061311 GCGACACTAGCTTTTGTATCGTTTA 59.939 40.000 13.48 0.00 0.00 2.01
2906 5409 8.374327 ACACTAGCTTTTGTATCGTTTAAAGT 57.626 30.769 0.00 0.00 31.81 2.66
2907 5410 8.833493 ACACTAGCTTTTGTATCGTTTAAAGTT 58.167 29.630 0.00 0.00 31.81 2.66
2908 5411 9.659830 CACTAGCTTTTGTATCGTTTAAAGTTT 57.340 29.630 0.00 0.00 31.81 2.66
2937 5440 9.905713 TTTTTGCATTCTCTATAGTATTGGACT 57.094 29.630 0.00 0.00 42.69 3.85
2940 5443 7.661968 TGCATTCTCTATAGTATTGGACTCAC 58.338 38.462 0.00 0.00 39.81 3.51
2943 5446 6.532119 TCTCTATAGTATTGGACTCACCCT 57.468 41.667 0.00 0.00 39.81 4.34
2945 5448 7.005296 TCTCTATAGTATTGGACTCACCCTTC 58.995 42.308 0.00 0.00 39.81 3.46
2955 5464 2.235898 GACTCACCCTTCAGCATCTCTT 59.764 50.000 0.00 0.00 0.00 2.85
2972 5481 6.528321 CATCTCTTGCAGACCCTTTATATCA 58.472 40.000 0.00 0.00 32.26 2.15
2973 5482 6.753913 TCTCTTGCAGACCCTTTATATCAT 57.246 37.500 0.00 0.00 0.00 2.45
2975 5484 5.065914 TCTTGCAGACCCTTTATATCATGC 58.934 41.667 0.00 0.00 0.00 4.06
2976 5485 3.754965 TGCAGACCCTTTATATCATGCC 58.245 45.455 0.00 0.00 0.00 4.40
2982 5491 4.389374 ACCCTTTATATCATGCCGAACTG 58.611 43.478 0.00 0.00 0.00 3.16
3043 5553 4.202493 TGACCTAAACAGACCCCTTAAACC 60.202 45.833 0.00 0.00 0.00 3.27
3050 5560 0.911045 GACCCCTTAAACCCCCTCGA 60.911 60.000 0.00 0.00 0.00 4.04
3052 5562 1.202769 CCCCTTAAACCCCCTCGACA 61.203 60.000 0.00 0.00 0.00 4.35
3057 5567 3.199289 CCTTAAACCCCCTCGACACTTAT 59.801 47.826 0.00 0.00 0.00 1.73
3058 5568 4.324022 CCTTAAACCCCCTCGACACTTATT 60.324 45.833 0.00 0.00 0.00 1.40
3079 5589 4.167597 TTTTTGAGGGGCACGGTC 57.832 55.556 0.00 0.00 0.00 4.79
3080 5590 1.227664 TTTTTGAGGGGCACGGTCA 59.772 52.632 0.00 0.00 0.00 4.02
3081 5591 0.395862 TTTTTGAGGGGCACGGTCAA 60.396 50.000 0.00 0.00 0.00 3.18
3082 5592 0.178975 TTTTGAGGGGCACGGTCAAT 60.179 50.000 3.41 0.00 30.50 2.57
3083 5593 0.178975 TTTGAGGGGCACGGTCAATT 60.179 50.000 3.41 0.00 30.50 2.32
3084 5594 0.893270 TTGAGGGGCACGGTCAATTG 60.893 55.000 0.00 0.00 0.00 2.32
3085 5595 2.676471 AGGGGCACGGTCAATTGC 60.676 61.111 0.00 0.00 38.06 3.56
3089 5599 2.988684 GCACGGTCAATTGCCCCA 60.989 61.111 0.00 0.00 32.21 4.96
3090 5600 2.569354 GCACGGTCAATTGCCCCAA 61.569 57.895 0.00 0.00 32.21 4.12
3091 5601 1.288752 CACGGTCAATTGCCCCAAC 59.711 57.895 0.00 0.00 0.00 3.77
3092 5602 1.906333 ACGGTCAATTGCCCCAACC 60.906 57.895 0.00 1.58 0.00 3.77
3093 5603 1.905843 CGGTCAATTGCCCCAACCA 60.906 57.895 12.32 0.00 0.00 3.67
3094 5604 1.671166 GGTCAATTGCCCCAACCAC 59.329 57.895 0.00 0.00 0.00 4.16
3095 5605 1.671166 GTCAATTGCCCCAACCACC 59.329 57.895 0.00 0.00 0.00 4.61
3096 5606 1.535202 TCAATTGCCCCAACCACCC 60.535 57.895 0.00 0.00 0.00 4.61
3097 5607 2.603171 AATTGCCCCAACCACCCG 60.603 61.111 0.00 0.00 0.00 5.28
3098 5608 3.153629 AATTGCCCCAACCACCCGA 62.154 57.895 0.00 0.00 0.00 5.14
3099 5609 3.879180 ATTGCCCCAACCACCCGAC 62.879 63.158 0.00 0.00 0.00 4.79
3108 5618 4.992511 CCACCCGACCCGCGAAAA 62.993 66.667 8.23 0.00 44.57 2.29
3109 5619 2.744709 CACCCGACCCGCGAAAAT 60.745 61.111 8.23 0.00 44.57 1.82
3110 5620 1.448189 CACCCGACCCGCGAAAATA 60.448 57.895 8.23 0.00 44.57 1.40
3111 5621 1.448365 ACCCGACCCGCGAAAATAC 60.448 57.895 8.23 0.00 44.57 1.89
3112 5622 1.448189 CCCGACCCGCGAAAATACA 60.448 57.895 8.23 0.00 44.57 2.29
3113 5623 1.020333 CCCGACCCGCGAAAATACAA 61.020 55.000 8.23 0.00 44.57 2.41
3114 5624 0.372334 CCGACCCGCGAAAATACAAG 59.628 55.000 8.23 0.00 44.57 3.16
3115 5625 1.073177 CGACCCGCGAAAATACAAGT 58.927 50.000 8.23 0.00 44.57 3.16
3116 5626 1.060122 CGACCCGCGAAAATACAAGTC 59.940 52.381 8.23 0.00 44.57 3.01
3117 5627 1.395954 GACCCGCGAAAATACAAGTCC 59.604 52.381 8.23 0.00 0.00 3.85
3118 5628 0.730840 CCCGCGAAAATACAAGTCCC 59.269 55.000 8.23 0.00 0.00 4.46
3119 5629 0.730840 CCGCGAAAATACAAGTCCCC 59.269 55.000 8.23 0.00 0.00 4.81
3120 5630 0.730840 CGCGAAAATACAAGTCCCCC 59.269 55.000 0.00 0.00 0.00 5.40
3141 5651 2.522436 CCCCGTCGGTGCCCTATA 60.522 66.667 11.06 0.00 0.00 1.31
3142 5652 1.911766 CCCCGTCGGTGCCCTATAT 60.912 63.158 11.06 0.00 0.00 0.86
3143 5653 0.612732 CCCCGTCGGTGCCCTATATA 60.613 60.000 11.06 0.00 0.00 0.86
3144 5654 0.529378 CCCGTCGGTGCCCTATATAC 59.471 60.000 11.06 0.00 0.00 1.47
3145 5655 1.542492 CCGTCGGTGCCCTATATACT 58.458 55.000 2.08 0.00 0.00 2.12
3146 5656 1.201647 CCGTCGGTGCCCTATATACTG 59.798 57.143 2.08 0.00 0.00 2.74
3147 5657 1.402456 CGTCGGTGCCCTATATACTGC 60.402 57.143 0.00 0.00 0.00 4.40
3148 5658 0.885879 TCGGTGCCCTATATACTGCG 59.114 55.000 0.00 0.00 0.00 5.18
3149 5659 0.885879 CGGTGCCCTATATACTGCGA 59.114 55.000 0.00 0.00 0.00 5.10
3150 5660 1.271379 CGGTGCCCTATATACTGCGAA 59.729 52.381 0.00 0.00 0.00 4.70
3151 5661 2.288579 CGGTGCCCTATATACTGCGAAA 60.289 50.000 0.00 0.00 0.00 3.46
3152 5662 3.326747 GGTGCCCTATATACTGCGAAAG 58.673 50.000 0.00 0.00 0.00 2.62
3170 5680 3.636231 CAGTTGGCGGGAGGGACA 61.636 66.667 0.00 0.00 0.00 4.02
3171 5681 2.610859 AGTTGGCGGGAGGGACAT 60.611 61.111 0.00 0.00 0.00 3.06
3172 5682 2.231380 AGTTGGCGGGAGGGACATT 61.231 57.895 0.00 0.00 0.00 2.71
3173 5683 1.304134 GTTGGCGGGAGGGACATTT 60.304 57.895 0.00 0.00 0.00 2.32
3174 5684 1.001393 TTGGCGGGAGGGACATTTC 60.001 57.895 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.095271 CCAATGAGTGACAAACTTGTTGTTTTT 60.095 33.333 0.00 0.00 45.69 1.94
2 3 6.368516 CCAATGAGTGACAAACTTGTTGTTTT 59.631 34.615 0.00 0.00 45.69 2.43
4 5 5.184864 TCCAATGAGTGACAAACTTGTTGTT 59.815 36.000 0.00 0.00 42.43 2.83
5 6 4.704540 TCCAATGAGTGACAAACTTGTTGT 59.295 37.500 0.00 0.00 42.43 3.32
6 7 5.247507 TCCAATGAGTGACAAACTTGTTG 57.752 39.130 0.00 0.00 42.43 3.33
7 8 7.068103 TGTTATCCAATGAGTGACAAACTTGTT 59.932 33.333 0.00 0.00 42.43 2.83
9 10 6.969366 TGTTATCCAATGAGTGACAAACTTG 58.031 36.000 0.00 0.00 40.07 3.16
10 11 7.765695 ATGTTATCCAATGAGTGACAAACTT 57.234 32.000 0.00 0.00 40.07 2.66
11 12 7.066284 GCTATGTTATCCAATGAGTGACAAACT 59.934 37.037 0.00 0.00 43.85 2.66
12 13 7.148255 TGCTATGTTATCCAATGAGTGACAAAC 60.148 37.037 0.00 0.00 0.00 2.93
14 15 6.413892 TGCTATGTTATCCAATGAGTGACAA 58.586 36.000 0.00 0.00 0.00 3.18
15 16 5.988287 TGCTATGTTATCCAATGAGTGACA 58.012 37.500 0.00 0.00 0.00 3.58
16 17 6.925610 TTGCTATGTTATCCAATGAGTGAC 57.074 37.500 0.00 0.00 0.00 3.67
17 18 6.038603 GCTTTGCTATGTTATCCAATGAGTGA 59.961 38.462 0.00 0.00 0.00 3.41
18 19 6.204359 GCTTTGCTATGTTATCCAATGAGTG 58.796 40.000 0.00 0.00 0.00 3.51
19 20 5.300286 GGCTTTGCTATGTTATCCAATGAGT 59.700 40.000 0.00 0.00 0.00 3.41
20 21 5.300034 TGGCTTTGCTATGTTATCCAATGAG 59.700 40.000 0.00 0.00 0.00 2.90
21 22 5.067674 GTGGCTTTGCTATGTTATCCAATGA 59.932 40.000 0.00 0.00 0.00 2.57
22 23 5.163530 TGTGGCTTTGCTATGTTATCCAATG 60.164 40.000 0.00 0.00 0.00 2.82
23 24 4.955450 TGTGGCTTTGCTATGTTATCCAAT 59.045 37.500 0.00 0.00 0.00 3.16
24 25 4.339748 TGTGGCTTTGCTATGTTATCCAA 58.660 39.130 0.00 0.00 0.00 3.53
25 26 3.947196 CTGTGGCTTTGCTATGTTATCCA 59.053 43.478 0.00 0.00 0.00 3.41
26 27 4.199310 TCTGTGGCTTTGCTATGTTATCC 58.801 43.478 0.00 0.00 0.00 2.59
27 28 5.220931 CCTTCTGTGGCTTTGCTATGTTATC 60.221 44.000 0.00 0.00 0.00 1.75
28 29 4.641989 CCTTCTGTGGCTTTGCTATGTTAT 59.358 41.667 0.00 0.00 0.00 1.89
29 30 4.009675 CCTTCTGTGGCTTTGCTATGTTA 58.990 43.478 0.00 0.00 0.00 2.41
30 31 2.821969 CCTTCTGTGGCTTTGCTATGTT 59.178 45.455 0.00 0.00 0.00 2.71
31 32 2.440409 CCTTCTGTGGCTTTGCTATGT 58.560 47.619 0.00 0.00 0.00 2.29
32 33 1.747355 CCCTTCTGTGGCTTTGCTATG 59.253 52.381 0.00 0.00 0.00 2.23
33 34 1.341383 CCCCTTCTGTGGCTTTGCTAT 60.341 52.381 0.00 0.00 0.00 2.97
34 35 0.038166 CCCCTTCTGTGGCTTTGCTA 59.962 55.000 0.00 0.00 0.00 3.49
35 36 1.228675 CCCCTTCTGTGGCTTTGCT 60.229 57.895 0.00 0.00 0.00 3.91
36 37 1.115326 AACCCCTTCTGTGGCTTTGC 61.115 55.000 0.00 0.00 0.00 3.68
37 38 0.961753 GAACCCCTTCTGTGGCTTTG 59.038 55.000 0.00 0.00 0.00 2.77
38 39 0.555769 TGAACCCCTTCTGTGGCTTT 59.444 50.000 0.00 0.00 0.00 3.51
39 40 0.178990 GTGAACCCCTTCTGTGGCTT 60.179 55.000 0.00 0.00 0.00 4.35
40 41 1.062488 AGTGAACCCCTTCTGTGGCT 61.062 55.000 0.00 0.00 0.00 4.75
41 42 0.178990 AAGTGAACCCCTTCTGTGGC 60.179 55.000 0.00 0.00 0.00 5.01
42 43 1.609208 CAAGTGAACCCCTTCTGTGG 58.391 55.000 0.00 0.00 0.00 4.17
43 44 0.954452 GCAAGTGAACCCCTTCTGTG 59.046 55.000 0.00 0.00 0.00 3.66
44 45 0.178990 GGCAAGTGAACCCCTTCTGT 60.179 55.000 0.00 0.00 0.00 3.41
45 46 0.178992 TGGCAAGTGAACCCCTTCTG 60.179 55.000 0.00 0.00 0.00 3.02
46 47 0.111253 CTGGCAAGTGAACCCCTTCT 59.889 55.000 0.00 0.00 0.00 2.85
47 48 1.527433 GCTGGCAAGTGAACCCCTTC 61.527 60.000 0.00 0.00 0.00 3.46
48 49 1.531602 GCTGGCAAGTGAACCCCTT 60.532 57.895 0.00 0.00 0.00 3.95
49 50 2.116125 GCTGGCAAGTGAACCCCT 59.884 61.111 0.00 0.00 0.00 4.79
50 51 3.365265 CGCTGGCAAGTGAACCCC 61.365 66.667 0.00 0.00 35.86 4.95
51 52 4.043200 GCGCTGGCAAGTGAACCC 62.043 66.667 5.64 0.00 39.62 4.11
61 62 0.595825 GAATTATGGCTTGCGCTGGC 60.596 55.000 9.73 14.62 40.52 4.85
62 63 0.740149 TGAATTATGGCTTGCGCTGG 59.260 50.000 9.73 1.88 36.09 4.85
63 64 1.132834 TGTGAATTATGGCTTGCGCTG 59.867 47.619 9.73 2.28 36.09 5.18
64 65 1.133025 GTGTGAATTATGGCTTGCGCT 59.867 47.619 9.73 0.00 36.09 5.92
65 66 1.133025 AGTGTGAATTATGGCTTGCGC 59.867 47.619 0.00 0.00 0.00 6.09
66 67 2.419673 TGAGTGTGAATTATGGCTTGCG 59.580 45.455 0.00 0.00 0.00 4.85
67 68 3.691118 TCTGAGTGTGAATTATGGCTTGC 59.309 43.478 0.00 0.00 0.00 4.01
68 69 4.334759 CCTCTGAGTGTGAATTATGGCTTG 59.665 45.833 3.66 0.00 0.00 4.01
69 70 4.521146 CCTCTGAGTGTGAATTATGGCTT 58.479 43.478 3.66 0.00 0.00 4.35
70 71 3.683847 GCCTCTGAGTGTGAATTATGGCT 60.684 47.826 3.66 0.00 34.42 4.75
71 72 2.615912 GCCTCTGAGTGTGAATTATGGC 59.384 50.000 3.66 0.00 0.00 4.40
72 73 3.877559 TGCCTCTGAGTGTGAATTATGG 58.122 45.455 3.66 0.00 0.00 2.74
73 74 5.885230 TTTGCCTCTGAGTGTGAATTATG 57.115 39.130 3.66 0.00 0.00 1.90
74 75 5.359009 CCATTTGCCTCTGAGTGTGAATTAT 59.641 40.000 3.66 0.00 0.00 1.28
75 76 4.701651 CCATTTGCCTCTGAGTGTGAATTA 59.298 41.667 3.66 0.00 0.00 1.40
76 77 3.508793 CCATTTGCCTCTGAGTGTGAATT 59.491 43.478 3.66 0.00 0.00 2.17
77 78 3.087031 CCATTTGCCTCTGAGTGTGAAT 58.913 45.455 3.66 0.00 0.00 2.57
78 79 2.507484 CCATTTGCCTCTGAGTGTGAA 58.493 47.619 3.66 0.00 0.00 3.18
79 80 1.883638 GCCATTTGCCTCTGAGTGTGA 60.884 52.381 3.66 0.00 0.00 3.58
80 81 0.524862 GCCATTTGCCTCTGAGTGTG 59.475 55.000 3.66 0.00 0.00 3.82
81 82 0.957395 CGCCATTTGCCTCTGAGTGT 60.957 55.000 3.66 0.00 36.24 3.55
82 83 1.798735 CGCCATTTGCCTCTGAGTG 59.201 57.895 3.66 0.00 36.24 3.51
83 84 2.042831 GCGCCATTTGCCTCTGAGT 61.043 57.895 0.00 0.00 36.24 3.41
84 85 1.588824 TTGCGCCATTTGCCTCTGAG 61.589 55.000 4.18 0.00 36.24 3.35
85 86 1.603171 TTGCGCCATTTGCCTCTGA 60.603 52.632 4.18 0.00 36.24 3.27
86 87 1.444895 GTTGCGCCATTTGCCTCTG 60.445 57.895 4.18 0.00 36.24 3.35
87 88 1.870055 CTGTTGCGCCATTTGCCTCT 61.870 55.000 4.18 0.00 36.24 3.69
88 89 1.444895 CTGTTGCGCCATTTGCCTC 60.445 57.895 4.18 0.00 36.24 4.70
89 90 0.893270 TACTGTTGCGCCATTTGCCT 60.893 50.000 4.18 0.00 36.24 4.75
90 91 0.456653 CTACTGTTGCGCCATTTGCC 60.457 55.000 4.18 0.00 36.24 4.52
91 92 0.240945 ACTACTGTTGCGCCATTTGC 59.759 50.000 4.18 0.00 0.00 3.68
92 93 1.266718 ACACTACTGTTGCGCCATTTG 59.733 47.619 4.18 0.00 0.00 2.32
93 94 1.266718 CACACTACTGTTGCGCCATTT 59.733 47.619 4.18 0.00 0.00 2.32
94 95 0.874390 CACACTACTGTTGCGCCATT 59.126 50.000 4.18 0.00 0.00 3.16
95 96 1.577328 GCACACTACTGTTGCGCCAT 61.577 55.000 4.18 0.00 0.00 4.40
96 97 2.250939 GCACACTACTGTTGCGCCA 61.251 57.895 4.18 0.00 0.00 5.69
97 98 2.175184 CTGCACACTACTGTTGCGCC 62.175 60.000 4.18 0.00 31.05 6.53
98 99 1.205064 CTGCACACTACTGTTGCGC 59.795 57.895 0.00 0.00 31.05 6.09
99 100 1.205064 GCTGCACACTACTGTTGCG 59.795 57.895 0.00 0.00 31.05 4.85
100 101 1.576421 GGCTGCACACTACTGTTGC 59.424 57.895 0.50 0.00 0.00 4.17
101 102 0.534877 TGGGCTGCACACTACTGTTG 60.535 55.000 0.00 0.00 0.00 3.33
102 103 0.535102 GTGGGCTGCACACTACTGTT 60.535 55.000 26.87 0.00 35.98 3.16
103 104 1.071471 GTGGGCTGCACACTACTGT 59.929 57.895 26.87 0.00 35.98 3.55
104 105 1.672356 GGTGGGCTGCACACTACTG 60.672 63.158 31.56 0.00 38.83 2.74
105 106 1.418908 AAGGTGGGCTGCACACTACT 61.419 55.000 31.56 19.74 38.83 2.57
106 107 0.323629 TAAGGTGGGCTGCACACTAC 59.676 55.000 31.56 17.82 38.83 2.73
107 108 0.323629 GTAAGGTGGGCTGCACACTA 59.676 55.000 31.56 16.42 38.83 2.74
108 109 1.073199 GTAAGGTGGGCTGCACACT 59.927 57.895 31.56 17.46 38.83 3.55
109 110 1.228124 TGTAAGGTGGGCTGCACAC 60.228 57.895 26.28 26.28 38.10 3.82
110 111 1.073025 CTGTAAGGTGGGCTGCACA 59.927 57.895 0.00 0.00 0.00 4.57
111 112 0.955919 GTCTGTAAGGTGGGCTGCAC 60.956 60.000 0.50 0.00 0.00 4.57
112 113 1.374947 GTCTGTAAGGTGGGCTGCA 59.625 57.895 0.50 0.00 0.00 4.41
113 114 1.377333 GGTCTGTAAGGTGGGCTGC 60.377 63.158 0.00 0.00 0.00 5.25
114 115 1.079127 CGGTCTGTAAGGTGGGCTG 60.079 63.158 0.00 0.00 0.00 4.85
115 116 0.834687 TTCGGTCTGTAAGGTGGGCT 60.835 55.000 0.00 0.00 0.00 5.19
116 117 0.035739 TTTCGGTCTGTAAGGTGGGC 59.964 55.000 0.00 0.00 0.00 5.36
117 118 1.346722 ACTTTCGGTCTGTAAGGTGGG 59.653 52.381 3.41 0.00 29.86 4.61
118 119 2.833631 ACTTTCGGTCTGTAAGGTGG 57.166 50.000 3.41 0.00 29.86 4.61
119 120 3.724374 TGAACTTTCGGTCTGTAAGGTG 58.276 45.455 3.41 0.00 29.86 4.00
120 121 3.640029 TCTGAACTTTCGGTCTGTAAGGT 59.360 43.478 3.41 0.00 35.11 3.50
121 122 4.252971 TCTGAACTTTCGGTCTGTAAGG 57.747 45.455 3.41 0.00 35.11 2.69
122 123 6.787085 AATTCTGAACTTTCGGTCTGTAAG 57.213 37.500 0.00 0.00 35.11 2.34
123 124 6.764085 TCAAATTCTGAACTTTCGGTCTGTAA 59.236 34.615 0.00 0.00 35.11 2.41
124 125 6.202188 GTCAAATTCTGAACTTTCGGTCTGTA 59.798 38.462 0.00 0.00 35.22 2.74
125 126 5.007724 GTCAAATTCTGAACTTTCGGTCTGT 59.992 40.000 0.00 0.00 35.22 3.41
126 127 5.237344 AGTCAAATTCTGAACTTTCGGTCTG 59.763 40.000 0.00 0.00 35.22 3.51
127 128 5.368989 AGTCAAATTCTGAACTTTCGGTCT 58.631 37.500 0.00 0.00 35.22 3.85
128 129 5.674933 AGTCAAATTCTGAACTTTCGGTC 57.325 39.130 0.00 0.00 35.22 4.79
129 130 7.444183 TGATTAGTCAAATTCTGAACTTTCGGT 59.556 33.333 0.00 0.00 35.22 4.69
130 131 7.806690 TGATTAGTCAAATTCTGAACTTTCGG 58.193 34.615 0.00 0.00 35.22 4.30
131 132 9.270576 CATGATTAGTCAAATTCTGAACTTTCG 57.729 33.333 0.00 0.00 38.01 3.46
132 133 9.565213 CCATGATTAGTCAAATTCTGAACTTTC 57.435 33.333 0.00 0.00 38.01 2.62
133 134 9.300681 TCCATGATTAGTCAAATTCTGAACTTT 57.699 29.630 0.00 0.00 38.01 2.66
134 135 8.868522 TCCATGATTAGTCAAATTCTGAACTT 57.131 30.769 0.00 0.00 38.01 2.66
135 136 8.868522 TTCCATGATTAGTCAAATTCTGAACT 57.131 30.769 0.00 0.00 38.01 3.01
136 137 9.346725 GTTTCCATGATTAGTCAAATTCTGAAC 57.653 33.333 0.00 0.00 38.01 3.18
137 138 9.300681 AGTTTCCATGATTAGTCAAATTCTGAA 57.699 29.630 0.00 0.00 38.01 3.02
138 139 8.733458 CAGTTTCCATGATTAGTCAAATTCTGA 58.267 33.333 0.00 0.00 38.01 3.27
139 140 7.972277 CCAGTTTCCATGATTAGTCAAATTCTG 59.028 37.037 0.00 0.00 38.01 3.02
140 141 7.890127 TCCAGTTTCCATGATTAGTCAAATTCT 59.110 33.333 0.00 0.00 38.01 2.40
141 142 8.055279 TCCAGTTTCCATGATTAGTCAAATTC 57.945 34.615 0.00 0.00 38.01 2.17
142 143 7.671398 ACTCCAGTTTCCATGATTAGTCAAATT 59.329 33.333 0.00 0.00 38.01 1.82
143 144 7.177878 ACTCCAGTTTCCATGATTAGTCAAAT 58.822 34.615 0.00 0.00 38.01 2.32
144 145 6.542821 ACTCCAGTTTCCATGATTAGTCAAA 58.457 36.000 0.00 0.00 38.01 2.69
145 146 6.126863 ACTCCAGTTTCCATGATTAGTCAA 57.873 37.500 0.00 0.00 38.01 3.18
146 147 5.762179 ACTCCAGTTTCCATGATTAGTCA 57.238 39.130 0.00 0.00 39.04 3.41
147 148 7.103641 TGTTACTCCAGTTTCCATGATTAGTC 58.896 38.462 0.00 0.00 0.00 2.59
148 149 7.016153 TGTTACTCCAGTTTCCATGATTAGT 57.984 36.000 0.00 0.00 0.00 2.24
149 150 7.390440 TGTTGTTACTCCAGTTTCCATGATTAG 59.610 37.037 0.00 0.00 0.00 1.73
150 151 7.227873 TGTTGTTACTCCAGTTTCCATGATTA 58.772 34.615 0.00 0.00 0.00 1.75
151 152 6.068010 TGTTGTTACTCCAGTTTCCATGATT 58.932 36.000 0.00 0.00 0.00 2.57
152 153 5.630121 TGTTGTTACTCCAGTTTCCATGAT 58.370 37.500 0.00 0.00 0.00 2.45
153 154 5.042463 TGTTGTTACTCCAGTTTCCATGA 57.958 39.130 0.00 0.00 0.00 3.07
154 155 5.063204 TCTGTTGTTACTCCAGTTTCCATG 58.937 41.667 0.00 0.00 0.00 3.66
155 156 5.304686 TCTGTTGTTACTCCAGTTTCCAT 57.695 39.130 2.82 0.00 0.00 3.41
156 157 4.764050 TCTGTTGTTACTCCAGTTTCCA 57.236 40.909 2.82 0.00 0.00 3.53
157 158 9.099454 CTTATATCTGTTGTTACTCCAGTTTCC 57.901 37.037 2.82 0.00 0.00 3.13
158 159 9.654663 ACTTATATCTGTTGTTACTCCAGTTTC 57.345 33.333 2.82 0.00 0.00 2.78
161 162 8.414778 GCTACTTATATCTGTTGTTACTCCAGT 58.585 37.037 2.82 0.00 0.00 4.00
162 163 7.591795 CGCTACTTATATCTGTTGTTACTCCAG 59.408 40.741 0.00 0.00 0.00 3.86
163 164 7.423199 CGCTACTTATATCTGTTGTTACTCCA 58.577 38.462 0.00 0.00 0.00 3.86
164 165 6.362820 GCGCTACTTATATCTGTTGTTACTCC 59.637 42.308 0.00 0.00 0.00 3.85
165 166 6.916387 TGCGCTACTTATATCTGTTGTTACTC 59.084 38.462 9.73 0.00 0.00 2.59
166 167 6.802608 TGCGCTACTTATATCTGTTGTTACT 58.197 36.000 9.73 0.00 0.00 2.24
167 168 6.345882 GCTGCGCTACTTATATCTGTTGTTAC 60.346 42.308 9.73 0.00 0.00 2.50
168 169 5.690409 GCTGCGCTACTTATATCTGTTGTTA 59.310 40.000 9.73 0.00 0.00 2.41
169 170 4.508124 GCTGCGCTACTTATATCTGTTGTT 59.492 41.667 9.73 0.00 0.00 2.83
170 171 4.051922 GCTGCGCTACTTATATCTGTTGT 58.948 43.478 9.73 0.00 0.00 3.32
171 172 4.302455 AGCTGCGCTACTTATATCTGTTG 58.698 43.478 9.73 0.00 36.99 3.33
172 173 4.592485 AGCTGCGCTACTTATATCTGTT 57.408 40.909 9.73 0.00 36.99 3.16
173 174 4.038042 TGAAGCTGCGCTACTTATATCTGT 59.962 41.667 9.73 0.00 38.25 3.41
174 175 4.550422 TGAAGCTGCGCTACTTATATCTG 58.450 43.478 9.73 0.00 38.25 2.90
175 176 4.855715 TGAAGCTGCGCTACTTATATCT 57.144 40.909 9.73 0.00 38.25 1.98
176 177 5.223382 TCTTGAAGCTGCGCTACTTATATC 58.777 41.667 9.73 0.94 38.25 1.63
177 178 5.201713 TCTTGAAGCTGCGCTACTTATAT 57.798 39.130 9.73 0.00 38.25 0.86
178 179 4.649088 TCTTGAAGCTGCGCTACTTATA 57.351 40.909 9.73 2.38 38.25 0.98
179 180 3.526931 TCTTGAAGCTGCGCTACTTAT 57.473 42.857 9.73 0.00 38.25 1.73
180 181 3.254060 CTTCTTGAAGCTGCGCTACTTA 58.746 45.455 9.73 0.00 38.25 2.24
181 182 2.072298 CTTCTTGAAGCTGCGCTACTT 58.928 47.619 9.73 12.37 38.25 2.24
182 183 1.719600 CTTCTTGAAGCTGCGCTACT 58.280 50.000 9.73 2.28 38.25 2.57
183 184 0.096108 GCTTCTTGAAGCTGCGCTAC 59.904 55.000 23.36 0.00 42.32 3.58
184 185 1.021390 GGCTTCTTGAAGCTGCGCTA 61.021 55.000 27.48 0.00 44.86 4.26
185 186 2.331132 GGCTTCTTGAAGCTGCGCT 61.331 57.895 27.48 0.00 44.86 5.92
186 187 2.177778 GGCTTCTTGAAGCTGCGC 59.822 61.111 27.48 0.00 44.86 6.09
187 188 1.673665 AGGGCTTCTTGAAGCTGCG 60.674 57.895 27.48 0.00 44.86 5.18
188 189 1.593296 CCAGGGCTTCTTGAAGCTGC 61.593 60.000 27.48 15.90 44.86 5.25
189 190 1.593296 GCCAGGGCTTCTTGAAGCTG 61.593 60.000 27.48 20.49 44.86 4.24
190 191 1.303970 GCCAGGGCTTCTTGAAGCT 60.304 57.895 27.48 11.96 44.86 3.74
191 192 2.694760 CGCCAGGGCTTCTTGAAGC 61.695 63.158 22.79 22.79 44.76 3.86
192 193 2.042831 CCGCCAGGGCTTCTTGAAG 61.043 63.158 8.91 6.04 39.32 3.02
193 194 2.034066 CCGCCAGGGCTTCTTGAA 59.966 61.111 8.91 0.00 39.32 2.69
194 195 2.927856 TCCGCCAGGGCTTCTTGA 60.928 61.111 8.91 0.00 39.32 3.02
195 196 2.437359 CTCCGCCAGGGCTTCTTG 60.437 66.667 8.91 0.00 39.32 3.02
196 197 2.607750 TCTCCGCCAGGGCTTCTT 60.608 61.111 8.91 0.00 39.32 2.52
197 198 3.080121 CTCTCCGCCAGGGCTTCT 61.080 66.667 8.91 0.00 39.32 2.85
198 199 4.847444 GCTCTCCGCCAGGGCTTC 62.847 72.222 8.91 0.00 46.57 3.86
211 212 5.320636 AGATCCCATCCTTGAGGAGCTCT 62.321 52.174 14.64 0.00 42.66 4.09
212 213 3.026068 AGATCCCATCCTTGAGGAGCTC 61.026 54.545 4.71 4.71 42.66 4.09
217 218 0.110104 GCCAGATCCCATCCTTGAGG 59.890 60.000 0.00 0.00 0.00 3.86
218 219 1.138568 AGCCAGATCCCATCCTTGAG 58.861 55.000 0.00 0.00 0.00 3.02
219 220 1.600058 AAGCCAGATCCCATCCTTGA 58.400 50.000 0.00 0.00 0.00 3.02
220 221 2.029623 CAAAGCCAGATCCCATCCTTG 58.970 52.381 0.00 0.00 0.00 3.61
221 222 1.925255 TCAAAGCCAGATCCCATCCTT 59.075 47.619 0.00 0.00 0.00 3.36
222 223 1.600058 TCAAAGCCAGATCCCATCCT 58.400 50.000 0.00 0.00 0.00 3.24
223 224 2.512705 GATCAAAGCCAGATCCCATCC 58.487 52.381 0.00 0.00 36.69 3.51
224 225 2.149578 CGATCAAAGCCAGATCCCATC 58.850 52.381 0.00 0.00 38.90 3.51
225 226 1.770658 TCGATCAAAGCCAGATCCCAT 59.229 47.619 0.00 0.00 38.90 4.00
226 227 1.203237 TCGATCAAAGCCAGATCCCA 58.797 50.000 0.00 0.00 38.90 4.37
227 228 2.557920 ATCGATCAAAGCCAGATCCC 57.442 50.000 0.00 0.00 38.90 3.85
228 229 3.434984 GCTTATCGATCAAAGCCAGATCC 59.565 47.826 18.28 0.00 41.80 3.36
229 230 4.660352 GCTTATCGATCAAAGCCAGATC 57.340 45.455 18.28 0.00 41.80 2.75
235 236 3.462021 AGTGAGGCTTATCGATCAAAGC 58.538 45.455 20.08 20.08 45.88 3.51
236 237 4.054671 GGAGTGAGGCTTATCGATCAAAG 58.945 47.826 0.00 1.86 0.00 2.77
237 238 3.706594 AGGAGTGAGGCTTATCGATCAAA 59.293 43.478 0.00 0.00 0.00 2.69
238 239 3.300388 AGGAGTGAGGCTTATCGATCAA 58.700 45.455 0.00 0.00 0.00 2.57
239 240 2.887783 GAGGAGTGAGGCTTATCGATCA 59.112 50.000 0.00 0.00 0.00 2.92
240 241 3.057596 CAGAGGAGTGAGGCTTATCGATC 60.058 52.174 0.00 0.00 0.00 3.69
241 242 2.890311 CAGAGGAGTGAGGCTTATCGAT 59.110 50.000 2.16 2.16 0.00 3.59
242 243 2.092375 TCAGAGGAGTGAGGCTTATCGA 60.092 50.000 0.00 0.00 0.00 3.59
243 244 2.302260 TCAGAGGAGTGAGGCTTATCG 58.698 52.381 0.00 0.00 0.00 2.92
244 245 3.894427 TCATCAGAGGAGTGAGGCTTATC 59.106 47.826 0.00 0.00 0.00 1.75
260 261 6.056428 TGAGCAAATCGAATCAATCATCAG 57.944 37.500 0.00 0.00 0.00 2.90
310 311 7.929941 AATAAAAAGAAGTTGCCAACCAAAA 57.070 28.000 3.45 0.00 34.68 2.44
324 325 6.014499 TCACGCCCCCATTTAAATAAAAAGAA 60.014 34.615 0.00 0.00 0.00 2.52
327 328 5.740290 TCACGCCCCCATTTAAATAAAAA 57.260 34.783 0.00 0.00 0.00 1.94
332 333 2.158971 GCAATCACGCCCCCATTTAAAT 60.159 45.455 0.00 0.00 0.00 1.40
333 334 1.205893 GCAATCACGCCCCCATTTAAA 59.794 47.619 0.00 0.00 0.00 1.52
336 337 2.709883 CGCAATCACGCCCCCATTT 61.710 57.895 0.00 0.00 0.00 2.32
350 351 0.035534 ATGTGGACCACTATGCGCAA 60.036 50.000 24.81 2.72 33.91 4.85
353 354 0.744057 TGCATGTGGACCACTATGCG 60.744 55.000 32.97 18.77 44.02 4.73
387 388 3.632604 TCCTTAGCAGACAGGTTCGATAG 59.367 47.826 0.00 0.00 0.00 2.08
390 391 1.819288 CTCCTTAGCAGACAGGTTCGA 59.181 52.381 0.00 0.00 0.00 3.71
437 438 7.670009 TCACTCTGTCTACACTCTTACTTAC 57.330 40.000 0.00 0.00 0.00 2.34
442 443 8.410673 AGAAAATCACTCTGTCTACACTCTTA 57.589 34.615 0.00 0.00 0.00 2.10
443 444 7.296628 AGAAAATCACTCTGTCTACACTCTT 57.703 36.000 0.00 0.00 0.00 2.85
444 445 6.909550 AGAAAATCACTCTGTCTACACTCT 57.090 37.500 0.00 0.00 0.00 3.24
445 446 7.954788 AAAGAAAATCACTCTGTCTACACTC 57.045 36.000 0.00 0.00 0.00 3.51
454 455 9.716507 TCGAACTTTAAAAAGAAAATCACTCTG 57.283 29.630 9.37 0.00 39.31 3.35
475 476 7.012959 GGAAATACTCCTAACCAATTCGAAC 57.987 40.000 0.00 0.00 41.61 3.95
502 521 4.202388 GGAACTTTAACACACCCTACTCCA 60.202 45.833 0.00 0.00 0.00 3.86
503 522 4.321718 GGAACTTTAACACACCCTACTCC 58.678 47.826 0.00 0.00 0.00 3.85
510 529 2.472816 TCGTCGGAACTTTAACACACC 58.527 47.619 0.00 0.00 0.00 4.16
518 537 3.558829 GGAGACTTTTTCGTCGGAACTTT 59.441 43.478 0.00 0.00 38.90 2.66
526 545 2.835027 ACCAGTGGAGACTTTTTCGTC 58.165 47.619 18.40 0.00 0.00 4.20
527 546 3.277142 AACCAGTGGAGACTTTTTCGT 57.723 42.857 18.40 0.00 0.00 3.85
528 547 3.625764 TCAAACCAGTGGAGACTTTTTCG 59.374 43.478 18.40 0.77 0.00 3.46
529 548 4.495844 CGTCAAACCAGTGGAGACTTTTTC 60.496 45.833 18.40 0.88 0.00 2.29
530 549 3.377172 CGTCAAACCAGTGGAGACTTTTT 59.623 43.478 18.40 1.27 0.00 1.94
531 550 2.943033 CGTCAAACCAGTGGAGACTTTT 59.057 45.455 18.40 2.10 0.00 2.27
532 551 2.093128 ACGTCAAACCAGTGGAGACTTT 60.093 45.455 18.40 2.52 0.00 2.66
533 552 1.485066 ACGTCAAACCAGTGGAGACTT 59.515 47.619 18.40 11.22 0.00 3.01
535 554 1.202486 TCACGTCAAACCAGTGGAGAC 60.202 52.381 18.40 18.19 36.60 3.36
540 816 0.861837 GCTCTCACGTCAAACCAGTG 59.138 55.000 0.00 0.00 37.24 3.66
544 820 2.271800 CCATAGCTCTCACGTCAAACC 58.728 52.381 0.00 0.00 0.00 3.27
561 837 3.308688 CCCCTATTATGCTTAGCAGCCAT 60.309 47.826 13.74 6.90 46.74 4.40
563 839 2.040412 ACCCCTATTATGCTTAGCAGCC 59.960 50.000 13.74 0.00 46.74 4.85
566 842 6.448369 AATGTACCCCTATTATGCTTAGCA 57.552 37.500 10.09 10.09 44.86 3.49
567 843 6.151144 CCAAATGTACCCCTATTATGCTTAGC 59.849 42.308 0.00 0.00 0.00 3.09
568 844 7.231467 ACCAAATGTACCCCTATTATGCTTAG 58.769 38.462 0.00 0.00 0.00 2.18
569 845 7.156694 ACCAAATGTACCCCTATTATGCTTA 57.843 36.000 0.00 0.00 0.00 3.09
570 846 6.025793 ACCAAATGTACCCCTATTATGCTT 57.974 37.500 0.00 0.00 0.00 3.91
571 847 5.663158 ACCAAATGTACCCCTATTATGCT 57.337 39.130 0.00 0.00 0.00 3.79
572 848 6.433093 CCTTACCAAATGTACCCCTATTATGC 59.567 42.308 0.00 0.00 0.00 3.14
573 849 6.433093 GCCTTACCAAATGTACCCCTATTATG 59.567 42.308 0.00 0.00 0.00 1.90
574 850 6.334505 AGCCTTACCAAATGTACCCCTATTAT 59.665 38.462 0.00 0.00 0.00 1.28
619 895 2.557924 GTCACCAAACCATCTCATGCAA 59.442 45.455 0.00 0.00 0.00 4.08
697 973 2.242926 AGGTGACGATGATCGGATGAT 58.757 47.619 19.82 0.00 45.59 2.45
698 974 1.692411 AGGTGACGATGATCGGATGA 58.308 50.000 19.82 0.00 45.59 2.92
699 975 2.351835 GGTAGGTGACGATGATCGGATG 60.352 54.545 19.82 0.00 45.59 3.51
762 1038 7.513969 CGTCCATTTTTAAAAACCGTGAAGAAC 60.514 37.037 15.35 6.53 0.00 3.01
811 1087 4.686191 AAACACTCAAATGGAAATGGCA 57.314 36.364 0.00 0.00 0.00 4.92
1117 2035 4.379603 CCACACTGTCACTAGCTAGTACAC 60.380 50.000 25.63 22.84 34.13 2.90
1143 2061 1.467713 GCTGAGCTCAGTACGTACCAC 60.468 57.143 37.25 18.46 45.45 4.16
1144 2062 0.809385 GCTGAGCTCAGTACGTACCA 59.191 55.000 37.25 10.53 45.45 3.25
1145 2063 1.096416 AGCTGAGCTCAGTACGTACC 58.904 55.000 37.25 22.38 45.45 3.34
1165 2083 1.877443 CCCTGGAGTAAAACCACAACG 59.123 52.381 0.00 0.00 33.57 4.10
1171 2089 1.628846 TCTGAGCCCTGGAGTAAAACC 59.371 52.381 0.00 0.00 0.00 3.27
1176 2094 0.710588 TCCTTCTGAGCCCTGGAGTA 59.289 55.000 0.00 0.00 0.00 2.59
1180 2098 1.306482 TCCTCCTTCTGAGCCCTGG 60.306 63.158 0.00 0.00 39.98 4.45
1202 2120 0.109086 AGAGCACCTTGATCGTCACG 60.109 55.000 0.00 0.00 37.94 4.35
1414 2437 1.346722 AGTTGTTCTCGTACCCCTTGG 59.653 52.381 0.00 0.00 37.80 3.61
1715 2745 1.154016 CGACGAGCTGATCACGGTT 60.154 57.895 8.79 0.00 32.98 4.44
1771 2801 2.599281 TGACCAGGAAGGCGTCGA 60.599 61.111 0.00 0.00 43.14 4.20
2223 3366 5.305812 CAAATTATGACTTCACGTGTCGAC 58.694 41.667 16.51 9.11 37.26 4.20
2248 3391 4.457257 TCACTGAAATCACAACACACACAA 59.543 37.500 0.00 0.00 0.00 3.33
2254 3397 4.096382 ACCAACTCACTGAAATCACAACAC 59.904 41.667 0.00 0.00 0.00 3.32
2255 3398 4.269183 ACCAACTCACTGAAATCACAACA 58.731 39.130 0.00 0.00 0.00 3.33
2256 3399 4.900635 ACCAACTCACTGAAATCACAAC 57.099 40.909 0.00 0.00 0.00 3.32
2257 3400 4.509970 CGTACCAACTCACTGAAATCACAA 59.490 41.667 0.00 0.00 0.00 3.33
2278 3421 1.365699 AAAAACAGCACTGACGACGT 58.634 45.000 0.00 0.00 0.00 4.34
2358 3503 7.949690 AAAATAAATAAGGTAGTGGGGTGAC 57.050 36.000 0.00 0.00 0.00 3.67
2380 3525 6.186957 AGGTGGCATAGTCATGATGTTTAAA 58.813 36.000 0.00 0.00 33.67 1.52
2392 3952 3.550437 AGTTGATGAGGTGGCATAGTC 57.450 47.619 0.00 0.00 0.00 2.59
2580 5037 5.238583 CCGAGTGAGACTTAACCAAATCTT 58.761 41.667 0.00 0.00 0.00 2.40
2603 5105 2.458620 AGGGTGTAGTTAGGTCTCAGC 58.541 52.381 0.00 0.00 0.00 4.26
2614 5116 8.030913 CCCTCTGTTTATAAATAGGGTGTAGT 57.969 38.462 23.01 0.00 39.11 2.73
2645 5147 8.932791 CCTATTGTACGACTTTTTCTTGTACAT 58.067 33.333 0.00 0.00 43.27 2.29
2646 5148 7.095523 GCCTATTGTACGACTTTTTCTTGTACA 60.096 37.037 0.00 0.00 42.44 2.90
2647 5149 7.117379 AGCCTATTGTACGACTTTTTCTTGTAC 59.883 37.037 0.00 0.00 36.74 2.90
2648 5150 7.156673 AGCCTATTGTACGACTTTTTCTTGTA 58.843 34.615 0.00 0.00 0.00 2.41
2649 5151 5.995897 AGCCTATTGTACGACTTTTTCTTGT 59.004 36.000 0.00 0.00 0.00 3.16
2650 5152 6.481954 AGCCTATTGTACGACTTTTTCTTG 57.518 37.500 0.00 0.00 0.00 3.02
2651 5153 6.817140 CCTAGCCTATTGTACGACTTTTTCTT 59.183 38.462 0.00 0.00 0.00 2.52
2652 5154 6.070938 ACCTAGCCTATTGTACGACTTTTTCT 60.071 38.462 0.00 0.00 0.00 2.52
2653 5155 6.104665 ACCTAGCCTATTGTACGACTTTTTC 58.895 40.000 0.00 0.00 0.00 2.29
2654 5156 6.046290 ACCTAGCCTATTGTACGACTTTTT 57.954 37.500 0.00 0.00 0.00 1.94
2655 5157 5.186409 TGACCTAGCCTATTGTACGACTTTT 59.814 40.000 0.00 0.00 0.00 2.27
2656 5158 4.708421 TGACCTAGCCTATTGTACGACTTT 59.292 41.667 0.00 0.00 0.00 2.66
2657 5159 4.275810 TGACCTAGCCTATTGTACGACTT 58.724 43.478 0.00 0.00 0.00 3.01
2658 5160 3.894759 TGACCTAGCCTATTGTACGACT 58.105 45.455 0.00 0.00 0.00 4.18
2659 5161 4.337555 TCTTGACCTAGCCTATTGTACGAC 59.662 45.833 0.00 0.00 0.00 4.34
2660 5162 4.529897 TCTTGACCTAGCCTATTGTACGA 58.470 43.478 0.00 0.00 0.00 3.43
2668 5170 5.542635 TCTTTTGTTCTCTTGACCTAGCCTA 59.457 40.000 0.00 0.00 0.00 3.93
2704 5206 9.224267 CATCAAACTATATATGCCAGCTAACTT 57.776 33.333 0.00 0.00 0.00 2.66
2731 5234 0.179032 ACGGGTGTGCTTGTGAATGA 60.179 50.000 0.00 0.00 0.00 2.57
2755 5258 3.202097 TGAATCACAGCGTGAGTTTTGA 58.798 40.909 14.80 0.03 46.04 2.69
2768 5271 0.324614 AGGCCACGACATGAATCACA 59.675 50.000 5.01 0.00 0.00 3.58
2772 5275 1.278985 TCTTGAGGCCACGACATGAAT 59.721 47.619 5.01 0.00 0.00 2.57
2780 5283 0.041312 CAAACGTTCTTGAGGCCACG 60.041 55.000 5.01 7.63 38.62 4.94
2795 5298 0.530288 AACATGGGCCGCATACAAAC 59.470 50.000 0.00 0.00 0.00 2.93
2818 5321 3.787476 GCTGAGAGCGAAAACGAAAACAA 60.787 43.478 0.00 0.00 0.00 2.83
2832 5335 2.008329 CCTGAAACATGAGCTGAGAGC 58.992 52.381 0.00 0.00 42.84 4.09
2849 5352 4.804108 CGAGATATAGCTCTCAAACCCTG 58.196 47.826 15.61 0.00 41.49 4.45
2855 5358 5.393569 GCCATAAGCGAGATATAGCTCTCAA 60.394 44.000 15.61 1.53 43.78 3.02
2877 5380 2.281762 CGATACAAAAGCTAGTGTCGCC 59.718 50.000 15.92 4.09 41.18 5.54
2882 5385 9.659830 AAACTTTAAACGATACAAAAGCTAGTG 57.340 29.630 0.00 0.00 33.25 2.74
2931 5434 1.003580 GATGCTGAAGGGTGAGTCCAA 59.996 52.381 0.00 0.00 38.11 3.53
2937 5440 2.775911 CAAGAGATGCTGAAGGGTGA 57.224 50.000 0.00 0.00 0.00 4.02
2955 5464 3.754965 GGCATGATATAAAGGGTCTGCA 58.245 45.455 0.00 0.00 0.00 4.41
2972 5481 6.374333 AGTGACAATTATTTACAGTTCGGCAT 59.626 34.615 0.00 0.00 0.00 4.40
2973 5482 5.703592 AGTGACAATTATTTACAGTTCGGCA 59.296 36.000 0.00 0.00 0.00 5.69
3020 5530 4.202493 GGTTTAAGGGGTCTGTTTAGGTCA 60.202 45.833 0.00 0.00 0.00 4.02
3021 5531 4.330250 GGTTTAAGGGGTCTGTTTAGGTC 58.670 47.826 0.00 0.00 0.00 3.85
3022 5532 3.074985 GGGTTTAAGGGGTCTGTTTAGGT 59.925 47.826 0.00 0.00 0.00 3.08
3025 5535 2.379567 GGGGGTTTAAGGGGTCTGTTTA 59.620 50.000 0.00 0.00 0.00 2.01
3026 5536 1.148446 GGGGGTTTAAGGGGTCTGTTT 59.852 52.381 0.00 0.00 0.00 2.83
3064 5574 0.178975 AATTGACCGTGCCCCTCAAA 60.179 50.000 0.00 0.00 0.00 2.69
3065 5575 0.893270 CAATTGACCGTGCCCCTCAA 60.893 55.000 0.00 0.00 0.00 3.02
3066 5576 1.303236 CAATTGACCGTGCCCCTCA 60.303 57.895 0.00 0.00 0.00 3.86
3067 5577 2.700773 GCAATTGACCGTGCCCCTC 61.701 63.158 10.34 0.00 34.58 4.30
3068 5578 2.676471 GCAATTGACCGTGCCCCT 60.676 61.111 10.34 0.00 34.58 4.79
3072 5582 2.569354 TTGGGGCAATTGACCGTGC 61.569 57.895 24.24 11.12 47.00 5.34
3073 5583 1.288752 GTTGGGGCAATTGACCGTG 59.711 57.895 24.24 0.00 47.00 4.94
3074 5584 1.906333 GGTTGGGGCAATTGACCGT 60.906 57.895 24.24 0.00 47.00 4.83
3075 5585 1.905843 TGGTTGGGGCAATTGACCG 60.906 57.895 24.24 0.00 47.00 4.79
3076 5586 1.671166 GTGGTTGGGGCAATTGACC 59.329 57.895 23.25 23.25 44.61 4.02
3077 5587 1.671166 GGTGGTTGGGGCAATTGAC 59.329 57.895 10.34 6.06 0.00 3.18
3078 5588 1.535202 GGGTGGTTGGGGCAATTGA 60.535 57.895 10.34 0.00 0.00 2.57
3079 5589 2.941616 CGGGTGGTTGGGGCAATTG 61.942 63.158 0.00 0.00 0.00 2.32
3080 5590 2.603171 CGGGTGGTTGGGGCAATT 60.603 61.111 0.00 0.00 0.00 2.32
3081 5591 3.585428 TCGGGTGGTTGGGGCAAT 61.585 61.111 0.00 0.00 0.00 3.56
3082 5592 4.589675 GTCGGGTGGTTGGGGCAA 62.590 66.667 0.00 0.00 0.00 4.52
3091 5601 2.855880 TATTTTCGCGGGTCGGGTGG 62.856 60.000 6.13 0.00 40.60 4.61
3092 5602 1.448189 TATTTTCGCGGGTCGGGTG 60.448 57.895 6.13 0.00 40.60 4.61
3093 5603 1.448365 GTATTTTCGCGGGTCGGGT 60.448 57.895 6.13 0.00 40.60 5.28
3094 5604 1.020333 TTGTATTTTCGCGGGTCGGG 61.020 55.000 6.13 0.00 41.10 5.14
3095 5605 0.372334 CTTGTATTTTCGCGGGTCGG 59.628 55.000 6.13 0.00 39.05 4.79
3096 5606 1.060122 GACTTGTATTTTCGCGGGTCG 59.940 52.381 6.13 0.00 40.15 4.79
3097 5607 1.395954 GGACTTGTATTTTCGCGGGTC 59.604 52.381 6.13 1.44 0.00 4.46
3098 5608 1.445871 GGACTTGTATTTTCGCGGGT 58.554 50.000 6.13 0.00 0.00 5.28
3099 5609 0.730840 GGGACTTGTATTTTCGCGGG 59.269 55.000 6.13 0.00 0.00 6.13
3100 5610 0.730840 GGGGACTTGTATTTTCGCGG 59.269 55.000 6.13 0.00 0.00 6.46
3101 5611 0.730840 GGGGGACTTGTATTTTCGCG 59.269 55.000 0.00 0.00 0.00 5.87
3131 5641 4.413777 GCTTTCGCAGTATATAGGGCACC 61.414 52.174 6.42 0.00 43.12 5.01
3132 5642 2.737252 GCTTTCGCAGTATATAGGGCAC 59.263 50.000 6.42 0.00 35.78 5.01
3133 5643 2.367241 TGCTTTCGCAGTATATAGGGCA 59.633 45.455 6.42 0.00 42.25 5.36
3134 5644 3.040147 TGCTTTCGCAGTATATAGGGC 57.960 47.619 0.00 0.00 42.25 5.19
3145 5655 3.659092 CCGCCAACTGCTTTCGCA 61.659 61.111 0.00 0.00 45.60 5.10
3146 5656 4.404654 CCCGCCAACTGCTTTCGC 62.405 66.667 0.00 0.00 38.05 4.70
3147 5657 2.668212 TCCCGCCAACTGCTTTCG 60.668 61.111 0.00 0.00 38.05 3.46
3148 5658 2.335712 CCTCCCGCCAACTGCTTTC 61.336 63.158 0.00 0.00 38.05 2.62
3149 5659 2.282462 CCTCCCGCCAACTGCTTT 60.282 61.111 0.00 0.00 38.05 3.51
3150 5660 4.351054 CCCTCCCGCCAACTGCTT 62.351 66.667 0.00 0.00 38.05 3.91
3153 5663 2.484287 AATGTCCCTCCCGCCAACTG 62.484 60.000 0.00 0.00 0.00 3.16
3154 5664 1.789576 AAATGTCCCTCCCGCCAACT 61.790 55.000 0.00 0.00 0.00 3.16
3155 5665 1.304134 AAATGTCCCTCCCGCCAAC 60.304 57.895 0.00 0.00 0.00 3.77
3156 5666 1.001393 GAAATGTCCCTCCCGCCAA 60.001 57.895 0.00 0.00 0.00 4.52
3157 5667 2.674754 GAAATGTCCCTCCCGCCA 59.325 61.111 0.00 0.00 0.00 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.