Multiple sequence alignment - TraesCS7A01G182500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G182500 chr7A 100.000 9751 0 0 1 9751 137776046 137766296 0.000000e+00 18007.0
1 TraesCS7A01G182500 chr7A 97.006 167 5 0 2705 2871 137773291 137773125 2.070000e-71 281.0
2 TraesCS7A01G182500 chr7A 97.006 167 5 0 2756 2922 137773342 137773176 2.070000e-71 281.0
3 TraesCS7A01G182500 chr7A 93.789 161 10 0 5490 5650 130229699 130229539 9.780000e-60 243.0
4 TraesCS7A01G182500 chr7A 91.156 147 9 3 6823 6967 491827845 491827701 7.730000e-46 196.0
5 TraesCS7A01G182500 chr7A 95.690 116 5 0 2705 2820 137773240 137773125 4.650000e-43 187.0
6 TraesCS7A01G182500 chr7A 95.690 116 5 0 2807 2922 137773342 137773227 4.650000e-43 187.0
7 TraesCS7A01G182500 chr7A 90.411 73 7 0 829 901 137775144 137775072 8.060000e-16 97.1
8 TraesCS7A01G182500 chr7A 90.411 73 7 0 903 975 137775218 137775146 8.060000e-16 97.1
9 TraesCS7A01G182500 chr7A 92.308 65 5 0 2705 2769 137773189 137773125 1.040000e-14 93.5
10 TraesCS7A01G182500 chr7A 92.308 65 5 0 2858 2922 137773342 137773278 1.040000e-14 93.5
11 TraesCS7A01G182500 chr7A 100.000 30 0 0 6562 6591 7512419 7512390 1.000000e-03 56.5
12 TraesCS7A01G182500 chr7B 96.860 2834 70 7 2807 5629 102237302 102234477 0.000000e+00 4723.0
13 TraesCS7A01G182500 chr7B 90.539 983 62 9 1846 2820 102238146 102237187 0.000000e+00 1271.0
14 TraesCS7A01G182500 chr7B 89.468 978 58 22 8799 9751 102230731 102229774 0.000000e+00 1194.0
15 TraesCS7A01G182500 chr7B 93.077 780 41 8 6820 7597 102232949 102232181 0.000000e+00 1129.0
16 TraesCS7A01G182500 chr7B 90.235 850 39 15 6003 6820 102233889 102233052 0.000000e+00 1070.0
17 TraesCS7A01G182500 chr7B 87.515 857 51 22 997 1821 102238974 102238142 0.000000e+00 939.0
18 TraesCS7A01G182500 chr7B 93.523 633 30 6 7590 8217 102231952 102231326 0.000000e+00 931.0
19 TraesCS7A01G182500 chr7B 95.255 548 17 4 8219 8757 102231285 102230738 0.000000e+00 859.0
20 TraesCS7A01G182500 chr7B 97.613 377 9 0 5615 5991 102234350 102233974 0.000000e+00 647.0
21 TraesCS7A01G182500 chr7B 97.414 116 3 0 2756 2871 102237302 102237187 2.150000e-46 198.0
22 TraesCS7A01G182500 chr7B 84.021 194 17 11 6780 6965 368147404 368147217 3.620000e-39 174.0
23 TraesCS7A01G182500 chr7B 91.111 90 2 5 6100 6184 102233975 102233887 6.190000e-22 117.0
24 TraesCS7A01G182500 chr7B 95.385 65 3 0 2705 2769 102237251 102237187 4.820000e-18 104.0
25 TraesCS7A01G182500 chr7B 92.308 65 5 0 2858 2922 102237302 102237238 1.040000e-14 93.5
26 TraesCS7A01G182500 chr7D 92.843 2613 98 25 5645 8217 137562228 137559665 0.000000e+00 3707.0
27 TraesCS7A01G182500 chr7D 97.823 1975 43 0 2763 4737 137565083 137563109 0.000000e+00 3410.0
28 TraesCS7A01G182500 chr7D 90.921 1575 64 32 8219 9751 137559625 137558088 0.000000e+00 2043.0
29 TraesCS7A01G182500 chr7D 89.082 1209 79 18 1271 2454 137566475 137565295 0.000000e+00 1452.0
30 TraesCS7A01G182500 chr7D 96.005 776 14 6 4734 5495 137562997 137562225 0.000000e+00 1245.0
31 TraesCS7A01G182500 chr7D 88.691 787 60 13 6 781 137567716 137566948 0.000000e+00 933.0
32 TraesCS7A01G182500 chr7D 96.791 374 11 1 2498 2871 137565296 137564924 2.990000e-174 623.0
33 TraesCS7A01G182500 chr7D 95.690 116 5 0 2705 2820 137565039 137564924 4.650000e-43 187.0
34 TraesCS7A01G182500 chr7D 95.413 109 5 0 2814 2922 137565083 137564975 3.620000e-39 174.0
35 TraesCS7A01G182500 chr7D 98.214 56 1 0 2714 2769 137564979 137564924 2.240000e-16 99.0
36 TraesCS7A01G182500 chr7D 94.828 58 3 0 2865 2922 137565083 137565026 3.750000e-14 91.6
37 TraesCS7A01G182500 chr5B 84.171 398 60 3 306 702 464314891 464314496 5.530000e-102 383.0
38 TraesCS7A01G182500 chr5B 84.171 398 60 3 306 702 464318929 464318534 5.530000e-102 383.0
39 TraesCS7A01G182500 chr5B 84.171 398 60 3 306 702 464320276 464319881 5.530000e-102 383.0
40 TraesCS7A01G182500 chr5B 83.668 398 62 3 306 702 464317582 464317187 1.200000e-98 372.0
41 TraesCS7A01G182500 chr5D 84.737 380 56 2 327 705 260680688 260681066 7.150000e-101 379.0
42 TraesCS7A01G182500 chr5D 82.750 400 65 4 306 703 548675197 548674800 4.330000e-93 353.0
43 TraesCS7A01G182500 chr5D 91.724 145 12 0 6823 6967 549893197 549893053 1.660000e-47 202.0
44 TraesCS7A01G182500 chr1D 82.938 422 66 6 292 708 106293120 106292700 9.250000e-100 375.0
45 TraesCS7A01G182500 chr1B 84.156 385 57 4 327 708 678205590 678205207 4.300000e-98 370.0
46 TraesCS7A01G182500 chrUn 94.268 157 9 0 5492 5648 95996576 95996420 3.520000e-59 241.0
47 TraesCS7A01G182500 chr2D 93.711 159 10 0 5494 5652 86086117 86085959 1.270000e-58 239.0
48 TraesCS7A01G182500 chr2D 90.698 172 14 1 5483 5652 556055645 556055816 2.740000e-55 228.0
49 TraesCS7A01G182500 chr3D 92.638 163 12 0 5493 5655 300567010 300566848 1.640000e-57 235.0
50 TraesCS7A01G182500 chr3D 91.566 166 13 1 5490 5654 580330578 580330743 2.740000e-55 228.0
51 TraesCS7A01G182500 chr1A 91.765 170 10 3 5492 5660 516570622 516570456 5.890000e-57 233.0
52 TraesCS7A01G182500 chr1A 90.323 155 10 4 6823 6975 452758573 452758724 2.150000e-46 198.0
53 TraesCS7A01G182500 chr2A 93.082 159 10 1 5494 5652 86446011 86445854 2.120000e-56 231.0
54 TraesCS7A01G182500 chr5A 91.667 156 9 3 6823 6976 47458918 47459071 7.670000e-51 213.0
55 TraesCS7A01G182500 chr5A 90.323 155 11 3 6823 6975 3455630 3455478 5.970000e-47 200.0
56 TraesCS7A01G182500 chr5A 91.156 147 9 3 6823 6967 299777057 299776913 7.730000e-46 196.0
57 TraesCS7A01G182500 chr3B 87.778 90 9 2 6537 6625 631963610 631963698 4.820000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G182500 chr7A 137766296 137776046 9750 True 2147.133333 18007 94.536667 1 9751 9 chr7A.!!$R4 9750
1 TraesCS7A01G182500 chr7B 102229774 102238974 9200 True 1021.192308 4723 93.100231 997 9751 13 chr7B.!!$R2 8754
2 TraesCS7A01G182500 chr7D 137558088 137567716 9628 True 1269.509091 3707 94.209182 6 9751 11 chr7D.!!$R1 9745
3 TraesCS7A01G182500 chr5B 464314496 464320276 5780 True 380.250000 383 84.045250 306 702 4 chr5B.!!$R1 396

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
205 206 0.247537 GCAAAAGGTTATCGTCCGCG 60.248 55.000 0.00 0.0 39.92 6.46 F
1599 2977 0.181350 GATGAATCCAGCGAGGGGTT 59.819 55.000 0.00 0.0 38.24 4.11 F
1939 3331 0.249868 GCACCGTGCATATGGCTAGA 60.250 55.000 18.79 0.0 44.26 2.43 F
2488 3967 0.254178 AATGCGAGCATTCCCTCACT 59.746 50.000 16.63 0.0 42.32 3.41 F
2489 3968 0.463295 ATGCGAGCATTCCCTCACTG 60.463 55.000 4.52 0.0 31.82 3.66 F
3029 4508 0.486879 AAAAGGGCAGTTCCATGGGA 59.513 50.000 13.02 0.0 36.21 4.37 F
3098 4577 1.108776 CCCTGATGCCATGAAACCTG 58.891 55.000 0.00 0.0 0.00 4.00 F
3306 4785 2.702270 AAGGAAAAGGGAGCCATTGT 57.298 45.000 0.00 0.0 0.00 2.71 F
4663 6251 5.770162 TCGAGGCTTATGTATCTGAAGATGA 59.230 40.000 2.99 0.0 36.05 2.92 F
5272 7371 0.994263 GAAAATGGCATTCTGCGTGC 59.006 50.000 14.04 0.0 46.21 5.34 F
6437 10269 1.085893 TCAGCCACATAATGCACACG 58.914 50.000 0.00 0.0 0.00 4.49 F
6725 10592 1.488393 GAGGGAATAAGTGAGCCAGCT 59.512 52.381 0.00 0.0 0.00 4.24 F
8592 12853 1.202592 TGCGAAGTCAGGTGCACTAAA 60.203 47.619 17.98 0.0 31.31 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2021 3413 0.245266 CAATAAACCACGGGGCCAAC 59.755 55.000 1.73 0.00 37.90 3.77 R
2470 3949 0.463295 CAGTGAGGGAATGCTCGCAT 60.463 55.000 0.00 0.00 36.98 4.73 R
3384 4863 1.068895 CACCATTGCCACTTGCTGAAA 59.931 47.619 0.00 0.00 42.00 2.69 R
3749 5337 2.681848 CTCCAATCAGCAGGTCATTGAC 59.318 50.000 8.34 8.34 30.31 3.18 R
4130 5718 3.458189 AGTCAGACAAAACCAAGAGTCG 58.542 45.455 2.66 0.00 36.18 4.18 R
4966 6682 3.626670 GGCAATCAAGAGATGAGAACCAG 59.373 47.826 0.00 0.00 42.53 4.00 R
5147 7246 1.790755 GACCACATGTCACTAACGCA 58.209 50.000 0.00 0.00 43.85 5.24 R
5272 7371 0.894835 GTATGGTGGCCTTTGGTTGG 59.105 55.000 3.32 0.00 0.00 3.77 R
6710 10577 0.394899 GGGCAGCTGGCTCACTTATT 60.395 55.000 35.64 0.00 44.81 1.40 R
7027 10998 3.320541 CACCTGCAATTACAAACAAGGGA 59.679 43.478 0.00 0.00 0.00 4.20 R
7459 11434 0.808060 GTTTCGAGCAGCTCTAGGGC 60.808 60.000 20.39 6.45 0.00 5.19 R
8608 12869 0.240945 CCAGTTCGCCACAAATCCAC 59.759 55.000 0.00 0.00 0.00 4.02 R
9728 14033 0.779997 GGGGGCCTTCCATACATCAT 59.220 55.000 0.84 0.00 37.22 2.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.686355 AATTTCTGCACGTGTCCCAA 58.314 45.000 18.38 6.15 0.00 4.12
35 36 1.682849 TCCCAAAGGACCATCCACG 59.317 57.895 0.00 0.00 39.61 4.94
36 37 0.838554 TCCCAAAGGACCATCCACGA 60.839 55.000 0.00 0.00 39.61 4.35
95 96 7.427895 GCGCAACACTTTTTATTTTGTTTCAAT 59.572 29.630 0.30 0.00 29.65 2.57
134 135 7.230849 AGTGCATCACAAATCTCCATAAAAA 57.769 32.000 0.00 0.00 36.74 1.94
135 136 7.844009 AGTGCATCACAAATCTCCATAAAAAT 58.156 30.769 0.00 0.00 36.74 1.82
136 137 8.316214 AGTGCATCACAAATCTCCATAAAAATT 58.684 29.630 0.00 0.00 36.74 1.82
139 140 8.385111 GCATCACAAATCTCCATAAAAATTGTG 58.615 33.333 8.91 8.91 44.47 3.33
140 141 9.426837 CATCACAAATCTCCATAAAAATTGTGT 57.573 29.630 13.43 1.92 43.87 3.72
141 142 8.815141 TCACAAATCTCCATAAAAATTGTGTG 57.185 30.769 13.43 0.00 43.87 3.82
188 189 1.838112 GTCCATGAACAGATTGGGCA 58.162 50.000 0.00 0.00 35.19 5.36
196 197 4.219115 TGAACAGATTGGGCAAAAGGTTA 58.781 39.130 0.00 0.00 0.00 2.85
202 203 1.828979 TGGGCAAAAGGTTATCGTCC 58.171 50.000 0.00 0.00 0.00 4.79
205 206 0.247537 GCAAAAGGTTATCGTCCGCG 60.248 55.000 0.00 0.00 39.92 6.46
234 235 5.473931 TCACTCTTTGTAGTCTGAATGCTC 58.526 41.667 0.00 0.00 0.00 4.26
237 238 5.105554 ACTCTTTGTAGTCTGAATGCTCGAT 60.106 40.000 0.00 0.00 0.00 3.59
252 253 5.391312 TGCTCGATGATGCTAGCTATTAA 57.609 39.130 17.23 0.00 35.95 1.40
253 254 5.783111 TGCTCGATGATGCTAGCTATTAAA 58.217 37.500 17.23 0.00 35.95 1.52
254 255 5.866092 TGCTCGATGATGCTAGCTATTAAAG 59.134 40.000 17.23 6.69 35.95 1.85
319 326 7.413109 GCTCCTATTACCTTTTTCGAGAAACTG 60.413 40.741 0.00 0.00 0.00 3.16
320 327 6.370718 TCCTATTACCTTTTTCGAGAAACTGC 59.629 38.462 0.00 0.00 0.00 4.40
322 329 1.602377 ACCTTTTTCGAGAAACTGCCG 59.398 47.619 0.00 0.00 0.00 5.69
343 350 6.166279 GCCGTCCTATTCATCTTCAATCATA 58.834 40.000 0.00 0.00 0.00 2.15
424 1780 2.153247 CGACGACTACAAACACTGAAGC 59.847 50.000 0.00 0.00 0.00 3.86
516 1872 0.714439 GGAAAGTCGTCGTGCTAAGC 59.286 55.000 0.00 0.00 0.00 3.09
524 1880 1.202371 CGTCGTGCTAAGCCCTCATAA 60.202 52.381 0.00 0.00 0.00 1.90
563 1919 1.011968 CAACCGTCGCCGATGAGAAA 61.012 55.000 8.12 0.00 35.63 2.52
597 1953 4.697352 CGAAAAGATCCAACCTGAAGACAT 59.303 41.667 0.00 0.00 0.00 3.06
617 1973 6.065976 ACATATGAACAAAGACTGGATCCA 57.934 37.500 15.27 15.27 0.00 3.41
624 1980 4.137543 ACAAAGACTGGATCCAAACAGAC 58.862 43.478 17.00 4.51 38.09 3.51
660 2017 3.687698 CCACCGACTAAATCCACGAAATT 59.312 43.478 0.00 0.00 0.00 1.82
666 2023 1.444836 AAATCCACGAAATTCGCCGA 58.555 45.000 15.90 11.08 45.12 5.54
786 2145 3.380486 CGTGTAGATACGAACGTGTCT 57.620 47.619 24.26 24.26 46.46 3.41
787 2146 4.505301 CGTGTAGATACGAACGTGTCTA 57.495 45.455 22.59 22.59 46.46 2.59
788 2147 4.503471 CGTGTAGATACGAACGTGTCTAG 58.497 47.826 25.36 15.05 45.08 2.43
789 2148 4.266265 CGTGTAGATACGAACGTGTCTAGA 59.734 45.833 25.36 22.70 45.08 2.43
790 2149 5.488458 GTGTAGATACGAACGTGTCTAGAC 58.512 45.833 28.84 28.84 46.68 2.59
791 2150 5.170748 TGTAGATACGAACGTGTCTAGACA 58.829 41.667 25.36 21.74 45.08 3.41
801 2160 1.493772 TGTCTAGACACGTTTTGGCG 58.506 50.000 21.74 0.00 38.90 5.69
802 2161 1.202440 TGTCTAGACACGTTTTGGCGT 60.202 47.619 21.74 0.00 46.88 5.68
803 2162 1.862827 GTCTAGACACGTTTTGGCGTT 59.137 47.619 18.20 0.00 43.83 4.84
804 2163 3.052036 GTCTAGACACGTTTTGGCGTTA 58.948 45.455 18.20 0.00 43.83 3.18
805 2164 3.490526 GTCTAGACACGTTTTGGCGTTAA 59.509 43.478 18.20 0.00 43.83 2.01
806 2165 4.025813 GTCTAGACACGTTTTGGCGTTAAA 60.026 41.667 18.20 0.00 43.83 1.52
807 2166 3.974871 AGACACGTTTTGGCGTTAAAT 57.025 38.095 0.00 0.00 43.83 1.40
808 2167 4.295857 AGACACGTTTTGGCGTTAAATT 57.704 36.364 0.00 0.00 43.83 1.82
809 2168 4.284485 AGACACGTTTTGGCGTTAAATTC 58.716 39.130 0.00 0.00 43.83 2.17
810 2169 4.030134 ACACGTTTTGGCGTTAAATTCA 57.970 36.364 0.00 0.00 43.83 2.57
811 2170 4.612943 ACACGTTTTGGCGTTAAATTCAT 58.387 34.783 0.00 0.00 43.83 2.57
812 2171 5.044558 ACACGTTTTGGCGTTAAATTCATT 58.955 33.333 0.00 0.00 43.83 2.57
813 2172 5.174216 ACACGTTTTGGCGTTAAATTCATTC 59.826 36.000 0.00 0.00 43.83 2.67
814 2173 4.380382 ACGTTTTGGCGTTAAATTCATTCG 59.620 37.500 0.00 0.00 43.04 3.34
815 2174 4.380382 CGTTTTGGCGTTAAATTCATTCGT 59.620 37.500 0.00 0.00 0.00 3.85
816 2175 5.564504 CGTTTTGGCGTTAAATTCATTCGTA 59.435 36.000 0.00 0.00 0.00 3.43
817 2176 6.249682 CGTTTTGGCGTTAAATTCATTCGTAT 59.750 34.615 0.00 0.00 0.00 3.06
818 2177 7.510896 CGTTTTGGCGTTAAATTCATTCGTATC 60.511 37.037 0.00 0.00 0.00 2.24
819 2178 6.671614 TTGGCGTTAAATTCATTCGTATCT 57.328 33.333 0.00 0.00 0.00 1.98
820 2179 7.773864 TTGGCGTTAAATTCATTCGTATCTA 57.226 32.000 0.00 0.00 0.00 1.98
821 2180 7.402811 TGGCGTTAAATTCATTCGTATCTAG 57.597 36.000 0.00 0.00 0.00 2.43
822 2181 7.204604 TGGCGTTAAATTCATTCGTATCTAGA 58.795 34.615 0.00 0.00 0.00 2.43
823 2182 7.381408 TGGCGTTAAATTCATTCGTATCTAGAG 59.619 37.037 0.00 0.00 0.00 2.43
824 2183 7.221287 GCGTTAAATTCATTCGTATCTAGAGC 58.779 38.462 0.00 0.00 0.00 4.09
825 2184 7.115095 GCGTTAAATTCATTCGTATCTAGAGCT 59.885 37.037 0.00 0.00 0.00 4.09
826 2185 8.969267 CGTTAAATTCATTCGTATCTAGAGCTT 58.031 33.333 0.00 0.00 0.00 3.74
830 2189 9.994432 AAATTCATTCGTATCTAGAGCTTTTTG 57.006 29.630 0.00 0.00 0.00 2.44
831 2190 7.539712 TTCATTCGTATCTAGAGCTTTTTGG 57.460 36.000 0.00 0.00 0.00 3.28
832 2191 6.873997 TCATTCGTATCTAGAGCTTTTTGGA 58.126 36.000 0.00 0.00 0.00 3.53
833 2192 7.500992 TCATTCGTATCTAGAGCTTTTTGGAT 58.499 34.615 0.00 0.00 0.00 3.41
834 2193 8.638873 TCATTCGTATCTAGAGCTTTTTGGATA 58.361 33.333 0.00 0.00 0.00 2.59
835 2194 8.920665 CATTCGTATCTAGAGCTTTTTGGATAG 58.079 37.037 0.00 0.00 0.00 2.08
836 2195 7.818997 TCGTATCTAGAGCTTTTTGGATAGA 57.181 36.000 0.00 0.00 0.00 1.98
837 2196 7.877003 TCGTATCTAGAGCTTTTTGGATAGAG 58.123 38.462 0.00 0.00 0.00 2.43
838 2197 7.502895 TCGTATCTAGAGCTTTTTGGATAGAGT 59.497 37.037 0.00 0.00 0.00 3.24
839 2198 8.138712 CGTATCTAGAGCTTTTTGGATAGAGTT 58.861 37.037 0.00 0.00 0.00 3.01
840 2199 9.255304 GTATCTAGAGCTTTTTGGATAGAGTTG 57.745 37.037 0.00 0.00 0.00 3.16
841 2200 7.482169 TCTAGAGCTTTTTGGATAGAGTTGA 57.518 36.000 0.00 0.00 0.00 3.18
842 2201 7.324178 TCTAGAGCTTTTTGGATAGAGTTGAC 58.676 38.462 0.00 0.00 0.00 3.18
843 2202 4.932200 AGAGCTTTTTGGATAGAGTTGACG 59.068 41.667 0.00 0.00 0.00 4.35
844 2203 3.437049 AGCTTTTTGGATAGAGTTGACGC 59.563 43.478 0.00 0.00 0.00 5.19
845 2204 3.437049 GCTTTTTGGATAGAGTTGACGCT 59.563 43.478 0.00 0.00 0.00 5.07
846 2205 4.083271 GCTTTTTGGATAGAGTTGACGCTT 60.083 41.667 0.00 0.00 0.00 4.68
847 2206 5.121768 GCTTTTTGGATAGAGTTGACGCTTA 59.878 40.000 0.00 0.00 0.00 3.09
848 2207 6.183360 GCTTTTTGGATAGAGTTGACGCTTAT 60.183 38.462 0.00 0.00 0.00 1.73
849 2208 6.662414 TTTTGGATAGAGTTGACGCTTATG 57.338 37.500 0.00 0.00 0.00 1.90
850 2209 3.717707 TGGATAGAGTTGACGCTTATGC 58.282 45.455 0.00 0.00 0.00 3.14
851 2210 3.384789 TGGATAGAGTTGACGCTTATGCT 59.615 43.478 0.00 0.00 36.97 3.79
852 2211 4.141937 TGGATAGAGTTGACGCTTATGCTT 60.142 41.667 0.00 0.00 36.97 3.91
853 2212 5.068591 TGGATAGAGTTGACGCTTATGCTTA 59.931 40.000 0.00 0.00 36.97 3.09
854 2213 5.983720 GGATAGAGTTGACGCTTATGCTTAA 59.016 40.000 0.00 0.00 36.97 1.85
855 2214 6.479001 GGATAGAGTTGACGCTTATGCTTAAA 59.521 38.462 0.00 0.00 36.97 1.52
856 2215 7.011109 GGATAGAGTTGACGCTTATGCTTAAAA 59.989 37.037 0.00 0.00 36.97 1.52
857 2216 6.743575 AGAGTTGACGCTTATGCTTAAAAT 57.256 33.333 0.00 0.00 36.97 1.82
858 2217 6.776094 AGAGTTGACGCTTATGCTTAAAATC 58.224 36.000 0.00 0.00 36.97 2.17
859 2218 6.371548 AGAGTTGACGCTTATGCTTAAAATCA 59.628 34.615 7.19 0.00 36.97 2.57
860 2219 6.908825 AGTTGACGCTTATGCTTAAAATCAA 58.091 32.000 0.00 7.78 36.97 2.57
861 2220 7.023575 AGTTGACGCTTATGCTTAAAATCAAG 58.976 34.615 10.44 0.00 36.97 3.02
870 2229 3.785486 GCTTAAAATCAAGCCACCATCC 58.215 45.455 0.00 0.00 44.22 3.51
871 2230 3.430790 GCTTAAAATCAAGCCACCATCCC 60.431 47.826 0.00 0.00 44.22 3.85
872 2231 1.571955 AAAATCAAGCCACCATCCCC 58.428 50.000 0.00 0.00 0.00 4.81
873 2232 0.712380 AAATCAAGCCACCATCCCCT 59.288 50.000 0.00 0.00 0.00 4.79
874 2233 1.607225 AATCAAGCCACCATCCCCTA 58.393 50.000 0.00 0.00 0.00 3.53
875 2234 1.607225 ATCAAGCCACCATCCCCTAA 58.393 50.000 0.00 0.00 0.00 2.69
876 2235 1.607225 TCAAGCCACCATCCCCTAAT 58.393 50.000 0.00 0.00 0.00 1.73
877 2236 1.929494 TCAAGCCACCATCCCCTAATT 59.071 47.619 0.00 0.00 0.00 1.40
878 2237 2.034124 CAAGCCACCATCCCCTAATTG 58.966 52.381 0.00 0.00 0.00 2.32
879 2238 1.308877 AGCCACCATCCCCTAATTGT 58.691 50.000 0.00 0.00 0.00 2.71
880 2239 1.215423 AGCCACCATCCCCTAATTGTC 59.785 52.381 0.00 0.00 0.00 3.18
881 2240 1.064017 GCCACCATCCCCTAATTGTCA 60.064 52.381 0.00 0.00 0.00 3.58
882 2241 2.424812 GCCACCATCCCCTAATTGTCAT 60.425 50.000 0.00 0.00 0.00 3.06
883 2242 3.490348 CCACCATCCCCTAATTGTCATC 58.510 50.000 0.00 0.00 0.00 2.92
884 2243 3.490348 CACCATCCCCTAATTGTCATCC 58.510 50.000 0.00 0.00 0.00 3.51
885 2244 3.139025 CACCATCCCCTAATTGTCATCCT 59.861 47.826 0.00 0.00 0.00 3.24
886 2245 3.793827 ACCATCCCCTAATTGTCATCCTT 59.206 43.478 0.00 0.00 0.00 3.36
887 2246 4.232820 ACCATCCCCTAATTGTCATCCTTT 59.767 41.667 0.00 0.00 0.00 3.11
888 2247 5.435041 ACCATCCCCTAATTGTCATCCTTTA 59.565 40.000 0.00 0.00 0.00 1.85
889 2248 6.068498 ACCATCCCCTAATTGTCATCCTTTAA 60.068 38.462 0.00 0.00 0.00 1.52
890 2249 6.838612 CCATCCCCTAATTGTCATCCTTTAAA 59.161 38.462 0.00 0.00 0.00 1.52
891 2250 7.344352 CCATCCCCTAATTGTCATCCTTTAAAA 59.656 37.037 0.00 0.00 0.00 1.52
892 2251 8.757877 CATCCCCTAATTGTCATCCTTTAAAAA 58.242 33.333 0.00 0.00 0.00 1.94
893 2252 8.909423 TCCCCTAATTGTCATCCTTTAAAAAT 57.091 30.769 0.00 0.00 0.00 1.82
894 2253 9.998752 TCCCCTAATTGTCATCCTTTAAAAATA 57.001 29.630 0.00 0.00 0.00 1.40
920 2279 5.803020 AAAATTGGATAGAGTTGACGCTC 57.197 39.130 0.00 0.00 35.82 5.03
921 2280 4.471904 AATTGGATAGAGTTGACGCTCA 57.528 40.909 0.00 0.00 37.94 4.26
922 2281 2.941453 TGGATAGAGTTGACGCTCAC 57.059 50.000 0.00 0.00 37.94 3.51
924 2283 1.192793 GATAGAGTTGACGCTCACGC 58.807 55.000 0.00 0.00 45.53 5.34
925 2284 0.811915 ATAGAGTTGACGCTCACGCT 59.188 50.000 0.00 0.00 45.53 5.07
926 2285 0.596577 TAGAGTTGACGCTCACGCTT 59.403 50.000 0.00 0.00 45.53 4.68
927 2286 0.596577 AGAGTTGACGCTCACGCTTA 59.403 50.000 0.00 0.00 45.53 3.09
928 2287 1.000607 AGAGTTGACGCTCACGCTTAA 60.001 47.619 0.00 0.00 45.53 1.85
929 2288 1.790623 GAGTTGACGCTCACGCTTAAA 59.209 47.619 0.00 0.00 45.53 1.52
930 2289 2.206750 AGTTGACGCTCACGCTTAAAA 58.793 42.857 0.00 0.00 45.53 1.52
931 2290 2.806244 AGTTGACGCTCACGCTTAAAAT 59.194 40.909 0.00 0.00 45.53 1.82
932 2291 3.120649 AGTTGACGCTCACGCTTAAAATC 60.121 43.478 0.00 0.00 45.53 2.17
933 2292 2.409012 TGACGCTCACGCTTAAAATCA 58.591 42.857 0.00 0.00 45.53 2.57
934 2293 2.803386 TGACGCTCACGCTTAAAATCAA 59.197 40.909 0.00 0.00 45.53 2.57
935 2294 3.120683 TGACGCTCACGCTTAAAATCAAG 60.121 43.478 0.00 0.00 45.53 3.02
936 2295 2.169179 CGCTCACGCTTAAAATCAAGC 58.831 47.619 0.00 0.00 46.06 4.01
937 2296 2.519963 GCTCACGCTTAAAATCAAGCC 58.480 47.619 2.48 0.00 46.68 4.35
938 2297 2.095263 GCTCACGCTTAAAATCAAGCCA 60.095 45.455 2.48 0.00 46.68 4.75
939 2298 3.492313 CTCACGCTTAAAATCAAGCCAC 58.508 45.455 2.48 0.00 46.68 5.01
940 2299 2.227865 TCACGCTTAAAATCAAGCCACC 59.772 45.455 2.48 0.00 46.68 4.61
941 2300 2.030363 CACGCTTAAAATCAAGCCACCA 60.030 45.455 2.48 0.00 46.68 4.17
942 2301 2.825532 ACGCTTAAAATCAAGCCACCAT 59.174 40.909 2.48 0.00 46.68 3.55
943 2302 3.119495 ACGCTTAAAATCAAGCCACCATC 60.119 43.478 2.48 0.00 46.68 3.51
944 2303 3.734902 CGCTTAAAATCAAGCCACCATCC 60.735 47.826 2.48 0.00 46.68 3.51
945 2304 3.430790 GCTTAAAATCAAGCCACCATCCC 60.431 47.826 0.00 0.00 44.22 3.85
946 2305 1.571955 AAAATCAAGCCACCATCCCC 58.428 50.000 0.00 0.00 0.00 4.81
947 2306 0.712380 AAATCAAGCCACCATCCCCT 59.288 50.000 0.00 0.00 0.00 4.79
948 2307 1.607225 AATCAAGCCACCATCCCCTA 58.393 50.000 0.00 0.00 0.00 3.53
949 2308 1.607225 ATCAAGCCACCATCCCCTAA 58.393 50.000 0.00 0.00 0.00 2.69
950 2309 1.607225 TCAAGCCACCATCCCCTAAT 58.393 50.000 0.00 0.00 0.00 1.73
951 2310 1.929494 TCAAGCCACCATCCCCTAATT 59.071 47.619 0.00 0.00 0.00 1.40
952 2311 2.314549 TCAAGCCACCATCCCCTAATTT 59.685 45.455 0.00 0.00 0.00 1.82
953 2312 3.106827 CAAGCCACCATCCCCTAATTTT 58.893 45.455 0.00 0.00 0.00 1.82
954 2313 3.032265 AGCCACCATCCCCTAATTTTC 57.968 47.619 0.00 0.00 0.00 2.29
955 2314 2.314549 AGCCACCATCCCCTAATTTTCA 59.685 45.455 0.00 0.00 0.00 2.69
956 2315 3.051880 AGCCACCATCCCCTAATTTTCAT 60.052 43.478 0.00 0.00 0.00 2.57
957 2316 3.321968 GCCACCATCCCCTAATTTTCATC 59.678 47.826 0.00 0.00 0.00 2.92
958 2317 3.897505 CCACCATCCCCTAATTTTCATCC 59.102 47.826 0.00 0.00 0.00 3.51
959 2318 4.387891 CCACCATCCCCTAATTTTCATCCT 60.388 45.833 0.00 0.00 0.00 3.24
960 2319 5.162991 CCACCATCCCCTAATTTTCATCCTA 60.163 44.000 0.00 0.00 0.00 2.94
961 2320 6.372931 CACCATCCCCTAATTTTCATCCTAA 58.627 40.000 0.00 0.00 0.00 2.69
962 2321 6.838612 CACCATCCCCTAATTTTCATCCTAAA 59.161 38.462 0.00 0.00 0.00 1.85
963 2322 7.344352 CACCATCCCCTAATTTTCATCCTAAAA 59.656 37.037 0.00 0.00 33.15 1.52
964 2323 7.904022 ACCATCCCCTAATTTTCATCCTAAAAA 59.096 33.333 0.00 0.00 32.42 1.94
993 2352 9.424319 GATAAAAATTCCTCAAAAAGTCTTCCC 57.576 33.333 0.00 0.00 0.00 3.97
994 2353 5.808366 AAATTCCTCAAAAAGTCTTCCCC 57.192 39.130 0.00 0.00 0.00 4.81
995 2354 2.971901 TCCTCAAAAAGTCTTCCCCC 57.028 50.000 0.00 0.00 0.00 5.40
1033 2392 1.731613 CGTTCTAGCACGACCGCAA 60.732 57.895 9.44 0.00 43.15 4.85
1040 2399 2.943345 GCACGACCGCAACACAGAG 61.943 63.158 0.00 0.00 0.00 3.35
1043 2402 1.285950 CGACCGCAACACAGAGAGA 59.714 57.895 0.00 0.00 0.00 3.10
1054 2413 2.226330 CACAGAGAGAGAGTATCCGGG 58.774 57.143 0.00 0.00 33.66 5.73
1056 2415 0.774908 AGAGAGAGAGTATCCGGGGG 59.225 60.000 0.00 0.00 33.66 5.40
1370 2737 4.710167 ACGCCACCGCTAAACCCC 62.710 66.667 0.00 0.00 38.22 4.95
1446 2824 0.183014 ATCTCCTCCGTCCTCGCTTA 59.817 55.000 0.00 0.00 35.54 3.09
1449 2827 0.747283 TCCTCCGTCCTCGCTTAGTC 60.747 60.000 0.00 0.00 35.54 2.59
1479 2857 0.817013 TTAATACCCGTCGCCGTCTT 59.183 50.000 0.00 0.00 0.00 3.01
1566 2944 0.237235 TGAGATTTTGTTCGCCGTGC 59.763 50.000 0.00 0.00 0.00 5.34
1599 2977 0.181350 GATGAATCCAGCGAGGGGTT 59.819 55.000 0.00 0.00 38.24 4.11
1600 2978 1.416401 GATGAATCCAGCGAGGGGTTA 59.584 52.381 0.00 0.00 38.24 2.85
1704 3082 2.501610 GGAGTGGGATCTCGTGGC 59.498 66.667 0.00 0.00 35.52 5.01
1778 3156 2.217750 TCAGTGTGTTCATCCGGTTTG 58.782 47.619 0.00 0.36 0.00 2.93
1829 3221 1.284408 GGAAATGCAAACACCGCGA 59.716 52.632 8.23 0.00 0.00 5.87
1854 3246 0.850391 CGTTTCCGCGTGCGATTAAC 60.850 55.000 16.91 14.20 42.83 2.01
1872 3264 4.323477 CCGGGGGTTTGTCTCGCA 62.323 66.667 0.00 0.00 0.00 5.10
1886 3278 2.648059 TCTCGCATGAGATCTCACTCA 58.352 47.619 27.37 10.85 46.25 3.41
1939 3331 0.249868 GCACCGTGCATATGGCTAGA 60.250 55.000 18.79 0.00 44.26 2.43
1974 3366 3.366679 GCGCGGATTAGTACTGGCTAATA 60.367 47.826 8.83 0.00 40.55 0.98
1997 3389 0.533491 GCTTTGCCATGCCAGATTGA 59.467 50.000 0.00 0.00 0.00 2.57
2001 3393 4.502604 GCTTTGCCATGCCAGATTGATAAT 60.503 41.667 0.00 0.00 0.00 1.28
2015 3407 7.500227 CCAGATTGATAATGTTGATGTACTGGT 59.500 37.037 0.00 0.00 35.44 4.00
2016 3408 8.340443 CAGATTGATAATGTTGATGTACTGGTG 58.660 37.037 0.00 0.00 0.00 4.17
2017 3409 6.435430 TTGATAATGTTGATGTACTGGTGC 57.565 37.500 0.00 0.00 0.00 5.01
2018 3410 5.744171 TGATAATGTTGATGTACTGGTGCT 58.256 37.500 0.00 0.00 0.00 4.40
2021 3413 2.503331 TGTTGATGTACTGGTGCTTGG 58.497 47.619 0.00 0.00 0.00 3.61
2068 3460 0.943835 GTGTTTGCATTTGGGGCGTC 60.944 55.000 0.00 0.00 0.00 5.19
2167 3559 0.456142 GCCGATCGCGTGCATATCTA 60.456 55.000 10.32 0.00 34.99 1.98
2188 3580 2.228103 AGCAGTTCATCATGCACAACAG 59.772 45.455 0.00 0.00 45.01 3.16
2207 3599 0.312102 GAGGCTTTTCACTGTGCACC 59.688 55.000 15.69 0.00 0.00 5.01
2212 3604 1.002468 CTTTTCACTGTGCACCCTTCG 60.002 52.381 15.69 0.00 0.00 3.79
2217 3609 0.396435 ACTGTGCACCCTTCGATTCA 59.604 50.000 15.69 0.00 0.00 2.57
2224 3616 2.743938 CACCCTTCGATTCAGTATCCG 58.256 52.381 0.00 0.00 0.00 4.18
2240 3632 4.579340 AGTATCCGTTTCTTGAGATAGCGA 59.421 41.667 0.00 0.00 0.00 4.93
2272 3664 7.944729 ATCTGTATCAATGCATATTTACCCC 57.055 36.000 0.00 0.00 0.00 4.95
2295 3687 7.233348 CCCCATCTAGTTTGTTTATGCCATTAT 59.767 37.037 0.00 0.00 0.00 1.28
2313 3705 9.855021 TGCCATTATAAAAGTCTAAAAGCTTTC 57.145 29.630 13.10 0.00 34.26 2.62
2314 3706 9.855021 GCCATTATAAAAGTCTAAAAGCTTTCA 57.145 29.630 13.10 0.00 34.26 2.69
2319 3711 6.392625 AAAAGTCTAAAAGCTTTCACCTCC 57.607 37.500 13.10 0.00 34.26 4.30
2320 3712 4.706842 AGTCTAAAAGCTTTCACCTCCA 57.293 40.909 13.10 0.00 0.00 3.86
2321 3713 5.248380 AGTCTAAAAGCTTTCACCTCCAT 57.752 39.130 13.10 0.00 0.00 3.41
2322 3714 6.374417 AGTCTAAAAGCTTTCACCTCCATA 57.626 37.500 13.10 0.00 0.00 2.74
2323 3715 6.174049 AGTCTAAAAGCTTTCACCTCCATAC 58.826 40.000 13.10 1.70 0.00 2.39
2324 3716 5.354513 GTCTAAAAGCTTTCACCTCCATACC 59.645 44.000 13.10 0.00 0.00 2.73
2372 3802 3.255725 CATGCCATGCGATTCTTTTTGT 58.744 40.909 0.00 0.00 0.00 2.83
2457 3936 3.991605 GACATATGTGTCGTGTTGGTC 57.008 47.619 14.43 0.00 44.71 4.02
2458 3937 2.333926 ACATATGTGTCGTGTTGGTCG 58.666 47.619 7.78 0.00 31.41 4.79
2459 3938 2.029739 ACATATGTGTCGTGTTGGTCGA 60.030 45.455 7.78 0.00 31.41 4.20
2467 3946 2.871133 TCGTGTTGGTCGACATATGAC 58.129 47.619 18.91 1.80 35.60 3.06
2468 3947 2.229302 TCGTGTTGGTCGACATATGACA 59.771 45.455 18.91 10.72 38.10 3.58
2469 3948 2.990514 CGTGTTGGTCGACATATGACAA 59.009 45.455 18.91 8.20 38.10 3.18
2470 3949 3.430556 CGTGTTGGTCGACATATGACAAA 59.569 43.478 18.91 0.00 38.10 2.83
2471 3950 4.092821 CGTGTTGGTCGACATATGACAAAT 59.907 41.667 18.91 0.00 38.10 2.32
2472 3951 5.323900 GTGTTGGTCGACATATGACAAATG 58.676 41.667 18.91 0.00 38.10 2.32
2473 3952 4.142708 TGTTGGTCGACATATGACAAATGC 60.143 41.667 18.91 0.72 38.10 3.56
2474 3953 2.607180 TGGTCGACATATGACAAATGCG 59.393 45.455 18.91 1.85 38.10 4.73
2475 3954 2.863740 GGTCGACATATGACAAATGCGA 59.136 45.455 18.91 4.08 38.10 5.10
2476 3955 3.060272 GGTCGACATATGACAAATGCGAG 60.060 47.826 18.91 0.00 38.10 5.03
2477 3956 2.539688 TCGACATATGACAAATGCGAGC 59.460 45.455 10.38 0.00 32.83 5.03
2478 3957 2.284952 CGACATATGACAAATGCGAGCA 59.715 45.455 10.38 0.00 0.00 4.26
2479 3958 3.059393 CGACATATGACAAATGCGAGCAT 60.059 43.478 10.38 4.52 38.46 3.79
2481 3960 4.852138 ACATATGACAAATGCGAGCATTC 58.148 39.130 21.61 11.59 44.86 2.67
2482 3961 2.857592 ATGACAAATGCGAGCATTCC 57.142 45.000 21.61 14.53 44.86 3.01
2483 3962 0.810648 TGACAAATGCGAGCATTCCC 59.189 50.000 21.61 14.24 44.86 3.97
2484 3963 1.098050 GACAAATGCGAGCATTCCCT 58.902 50.000 21.61 5.79 44.86 4.20
2485 3964 1.064654 GACAAATGCGAGCATTCCCTC 59.935 52.381 21.61 13.03 44.86 4.30
2486 3965 1.097232 CAAATGCGAGCATTCCCTCA 58.903 50.000 21.61 0.00 44.86 3.86
2487 3966 1.098050 AAATGCGAGCATTCCCTCAC 58.902 50.000 21.61 0.00 44.86 3.51
2488 3967 0.254178 AATGCGAGCATTCCCTCACT 59.746 50.000 16.63 0.00 42.32 3.41
2489 3968 0.463295 ATGCGAGCATTCCCTCACTG 60.463 55.000 4.52 0.00 31.82 3.66
2490 3969 2.467826 GCGAGCATTCCCTCACTGC 61.468 63.158 0.00 0.00 36.15 4.40
2491 3970 1.078918 CGAGCATTCCCTCACTGCA 60.079 57.895 0.00 0.00 38.37 4.41
2492 3971 0.463295 CGAGCATTCCCTCACTGCAT 60.463 55.000 0.00 0.00 38.37 3.96
2493 3972 1.022735 GAGCATTCCCTCACTGCATG 58.977 55.000 0.00 0.00 38.37 4.06
2494 3973 0.622136 AGCATTCCCTCACTGCATGA 59.378 50.000 0.00 0.00 38.37 3.07
2495 3974 1.005097 AGCATTCCCTCACTGCATGAA 59.995 47.619 0.00 0.00 36.69 2.57
2496 3975 1.820519 GCATTCCCTCACTGCATGAAA 59.179 47.619 0.00 0.00 36.69 2.69
2497 3976 2.429610 GCATTCCCTCACTGCATGAAAT 59.570 45.455 0.00 0.00 36.69 2.17
2498 3977 3.118884 GCATTCCCTCACTGCATGAAATT 60.119 43.478 0.00 0.00 36.69 1.82
2499 3978 4.622220 GCATTCCCTCACTGCATGAAATTT 60.622 41.667 0.00 0.00 36.69 1.82
2500 3979 5.484715 CATTCCCTCACTGCATGAAATTTT 58.515 37.500 0.00 0.00 36.69 1.82
2501 3980 4.789012 TCCCTCACTGCATGAAATTTTC 57.211 40.909 0.00 2.05 36.69 2.29
2619 4098 6.171921 TCCATTCCATGCCATTTTTAGTTTG 58.828 36.000 0.00 0.00 0.00 2.93
2632 4111 9.522804 CCATTTTTAGTTTGCAAGTTTACAGTA 57.477 29.630 0.00 0.00 0.00 2.74
2794 4273 8.279103 GTGATAAAAACTTCTGTCAGTGAAGAG 58.721 37.037 10.00 0.00 42.37 2.85
2814 4293 3.780850 GAGTCCCCTAATCCTGGAGAAAA 59.219 47.826 1.52 0.00 0.00 2.29
2856 4335 3.133183 GTCAGTGAAGAGTCCCCTAATCC 59.867 52.174 0.00 0.00 0.00 3.01
2857 4336 3.012959 TCAGTGAAGAGTCCCCTAATCCT 59.987 47.826 0.00 0.00 0.00 3.24
2859 4338 2.436173 GTGAAGAGTCCCCTAATCCTGG 59.564 54.545 0.00 0.00 0.00 4.45
2860 4339 2.317900 TGAAGAGTCCCCTAATCCTGGA 59.682 50.000 0.00 0.00 0.00 3.86
2862 4341 2.227703 AGAGTCCCCTAATCCTGGAGA 58.772 52.381 1.52 0.00 0.00 3.71
2864 4343 3.014110 AGAGTCCCCTAATCCTGGAGAAA 59.986 47.826 1.52 0.00 0.00 2.52
2866 4345 3.783082 AGTCCCCTAATCCTGGAGAAAAG 59.217 47.826 1.52 0.00 0.00 2.27
2867 4346 3.117851 GTCCCCTAATCCTGGAGAAAAGG 60.118 52.174 1.52 6.04 36.02 3.11
2874 4353 2.348472 TCCTGGAGAAAAGGATGTGGT 58.652 47.619 0.00 0.00 38.96 4.16
2879 4358 5.538433 CCTGGAGAAAAGGATGTGGTAAAAA 59.462 40.000 0.00 0.00 36.91 1.94
2880 4359 6.399639 TGGAGAAAAGGATGTGGTAAAAAC 57.600 37.500 0.00 0.00 0.00 2.43
2882 4361 6.609616 TGGAGAAAAGGATGTGGTAAAAACTT 59.390 34.615 0.00 0.00 0.00 2.66
2883 4362 7.145985 GGAGAAAAGGATGTGGTAAAAACTTC 58.854 38.462 0.00 0.00 0.00 3.01
2884 4363 7.014326 GGAGAAAAGGATGTGGTAAAAACTTCT 59.986 37.037 0.00 0.00 0.00 2.85
2885 4364 7.716612 AGAAAAGGATGTGGTAAAAACTTCTG 58.283 34.615 0.00 0.00 0.00 3.02
2887 4366 6.635030 AAGGATGTGGTAAAAACTTCTGTC 57.365 37.500 0.00 0.00 0.00 3.51
2889 4368 5.765182 AGGATGTGGTAAAAACTTCTGTCAG 59.235 40.000 0.00 0.00 0.00 3.51
2890 4369 5.531287 GGATGTGGTAAAAACTTCTGTCAGT 59.469 40.000 0.00 0.00 0.00 3.41
2891 4370 5.811399 TGTGGTAAAAACTTCTGTCAGTG 57.189 39.130 0.00 0.00 0.00 3.66
2892 4371 5.492895 TGTGGTAAAAACTTCTGTCAGTGA 58.507 37.500 0.00 0.00 0.00 3.41
2893 4372 5.941058 TGTGGTAAAAACTTCTGTCAGTGAA 59.059 36.000 0.00 0.00 0.00 3.18
2894 4373 6.093495 TGTGGTAAAAACTTCTGTCAGTGAAG 59.907 38.462 0.00 0.10 44.52 3.02
2895 4374 6.315393 GTGGTAAAAACTTCTGTCAGTGAAGA 59.685 38.462 10.00 0.00 42.37 2.87
2897 4376 6.539103 GGTAAAAACTTCTGTCAGTGAAGAGT 59.461 38.462 10.00 0.00 42.37 3.24
2900 4379 2.630580 ACTTCTGTCAGTGAAGAGTCCC 59.369 50.000 10.00 0.00 42.37 4.46
2901 4380 1.633774 TCTGTCAGTGAAGAGTCCCC 58.366 55.000 0.00 0.00 0.00 4.81
2902 4381 1.148027 TCTGTCAGTGAAGAGTCCCCT 59.852 52.381 0.00 0.00 0.00 4.79
2903 4382 2.378886 TCTGTCAGTGAAGAGTCCCCTA 59.621 50.000 0.00 0.00 0.00 3.53
2905 4384 3.772025 CTGTCAGTGAAGAGTCCCCTAAT 59.228 47.826 0.00 0.00 0.00 1.73
2906 4385 4.942944 TGTCAGTGAAGAGTCCCCTAATA 58.057 43.478 0.00 0.00 0.00 0.98
2941 4420 4.335416 GTGAAGATGAAGGGGATTTGTCA 58.665 43.478 0.00 0.00 0.00 3.58
2956 4435 7.256154 GGGGATTTGTCAAGGAAAACAGAAATA 60.256 37.037 0.00 0.00 0.00 1.40
2985 4464 8.556517 AGCGTAAAAGAAACAGTAAATTCAAC 57.443 30.769 0.00 0.00 0.00 3.18
3020 4499 1.679032 GCGATGAGGTAAAAGGGCAGT 60.679 52.381 0.00 0.00 0.00 4.40
3029 4508 0.486879 AAAAGGGCAGTTCCATGGGA 59.513 50.000 13.02 0.00 36.21 4.37
3098 4577 1.108776 CCCTGATGCCATGAAACCTG 58.891 55.000 0.00 0.00 0.00 4.00
3306 4785 2.702270 AAGGAAAAGGGAGCCATTGT 57.298 45.000 0.00 0.00 0.00 2.71
3384 4863 6.238842 CCTGTTGAAGTTGACAAGAATGATGT 60.239 38.462 0.00 0.00 0.00 3.06
3433 5021 7.038659 AGACCGTCTCAGATTCTGAAATTAAG 58.961 38.462 16.79 5.13 40.18 1.85
3749 5337 7.226720 GGTCATCCATAGTACCAAAAGTGTATG 59.773 40.741 0.00 0.00 32.04 2.39
3955 5543 7.542477 GTCAGAAAAATGAGAGAGTCGATTACA 59.458 37.037 0.00 0.00 0.00 2.41
4130 5718 6.983890 ACTTCCATGTGGATTTTAAACAACAC 59.016 34.615 1.98 7.87 44.98 3.32
4268 5856 7.913789 TCTGTTTTGTATGTTCCCTACTGTAT 58.086 34.615 0.00 0.00 0.00 2.29
4272 5860 8.789762 GTTTTGTATGTTCCCTACTGTATTGTT 58.210 33.333 0.00 0.00 0.00 2.83
4663 6251 5.770162 TCGAGGCTTATGTATCTGAAGATGA 59.230 40.000 2.99 0.00 36.05 2.92
4977 6693 8.908786 TGATAATTGATAACCTGGTTCTCATC 57.091 34.615 23.20 18.43 30.86 2.92
5032 7131 7.327275 CGGTACACTTATCTGAAGCTCATATTC 59.673 40.741 0.00 0.00 0.00 1.75
5272 7371 0.994263 GAAAATGGCATTCTGCGTGC 59.006 50.000 14.04 0.00 46.21 5.34
5356 7455 1.734465 GAACAAAGCAGATCCACTCCG 59.266 52.381 0.00 0.00 0.00 4.63
5500 7600 6.539103 CAGTTATGCTTCTTTAAGTACTCCCC 59.461 42.308 0.00 0.00 34.99 4.81
5525 7625 7.202121 CCCCGTTCCCTAATATAAGACCTTTTA 60.202 40.741 0.00 0.00 0.00 1.52
5757 9108 4.819105 ACAATCTATCCGTGGTTCTTCA 57.181 40.909 0.00 0.00 0.00 3.02
5858 9209 7.436376 GGAGATTATTTCAAACTTGCCTATTGC 59.564 37.037 0.00 0.00 41.77 3.56
6017 9685 7.588497 ACATGTGAGTGAGTATTATCTAGCA 57.412 36.000 0.00 0.00 0.00 3.49
6018 9686 8.187913 ACATGTGAGTGAGTATTATCTAGCAT 57.812 34.615 0.00 0.00 0.00 3.79
6070 9738 6.092670 CCTTTTACATCAGATGGCATATACCG 59.907 42.308 15.13 0.00 33.60 4.02
6437 10269 1.085893 TCAGCCACATAATGCACACG 58.914 50.000 0.00 0.00 0.00 4.49
6504 10336 7.060174 CGTCCTATTTAAAACACCGTCATTTTG 59.940 37.037 0.00 0.00 30.80 2.44
6630 10473 5.184671 AGAAAATTCGGGTAGACTAGTTCGT 59.815 40.000 0.00 0.00 0.00 3.85
6631 10474 5.397142 AAATTCGGGTAGACTAGTTCGTT 57.603 39.130 0.00 0.00 0.00 3.85
6635 10478 2.097142 CGGGTAGACTAGTTCGTTGAGG 59.903 54.545 0.00 0.00 0.00 3.86
6636 10479 2.426381 GGGTAGACTAGTTCGTTGAGGG 59.574 54.545 0.00 0.00 0.00 4.30
6725 10592 1.488393 GAGGGAATAAGTGAGCCAGCT 59.512 52.381 0.00 0.00 0.00 4.24
6817 10684 4.377839 ACTGTACTGTGCTACTGCTATG 57.622 45.455 4.39 0.00 40.48 2.23
6923 10894 5.590663 CCAGCAATAGTCTAGACTAGTCACA 59.409 44.000 30.78 14.61 45.94 3.58
7283 11254 9.976511 ATGATTGATATTCTTGCTTTACCAATG 57.023 29.630 0.00 0.00 0.00 2.82
7286 11257 6.563422 TGATATTCTTGCTTTACCAATGTGC 58.437 36.000 0.00 0.00 0.00 4.57
7321 11292 3.069158 ACCGTTCTTGCTTAGTAGTGTGT 59.931 43.478 0.00 0.00 0.00 3.72
7332 11303 2.029623 AGTAGTGTGTGACTGTTCGGT 58.970 47.619 0.00 0.00 35.96 4.69
7384 11355 8.887717 CAATGCATCTAATAGAGCTATTTACCC 58.112 37.037 0.00 0.00 37.07 3.69
7559 11534 8.824756 AGACAAAGTAGAATACCAGTCTGATA 57.175 34.615 0.00 0.00 44.47 2.15
7576 11551 6.051717 GTCTGATATGGTGCTATTCTTGTGT 58.948 40.000 0.00 0.00 0.00 3.72
7894 12107 5.691754 GCTTTATCCAATAATTTGAAGGCCG 59.308 40.000 0.00 0.00 34.60 6.13
7965 12178 4.516698 AGAAATACAACTGGAACTGCACAG 59.483 41.667 0.75 0.75 40.48 3.66
7972 12185 3.348236 GAACTGCACAGTGCCCAG 58.652 61.111 23.06 16.34 44.23 4.45
8004 12217 2.900122 ATGCGGTTTCAATGAGTTCG 57.100 45.000 0.00 0.00 0.00 3.95
8061 12274 7.312154 GTGAGATAACAACAAATGCATTACCA 58.688 34.615 13.39 0.00 0.00 3.25
8085 12298 2.386661 ACTACTTGACAGATTGGCGG 57.613 50.000 0.00 0.00 0.00 6.13
8545 12804 2.956132 TGCCCAAAGATTTGTGGAAGA 58.044 42.857 13.66 0.00 37.03 2.87
8552 12813 5.334879 CCAAAGATTTGTGGAAGAACTACCG 60.335 44.000 4.71 0.00 37.03 4.02
8592 12853 1.202592 TGCGAAGTCAGGTGCACTAAA 60.203 47.619 17.98 0.00 31.31 1.85
8608 12869 8.863049 GGTGCACTAAAGAATTTTCATGTATTG 58.137 33.333 17.98 0.00 40.09 1.90
8686 12952 2.049888 TGGGCGCATGTTGATTATCA 57.950 45.000 10.83 0.00 0.00 2.15
8757 13023 1.103398 GCCTTCGGTATTGCTGGCAT 61.103 55.000 0.00 0.00 40.04 4.40
8758 13024 1.392589 CCTTCGGTATTGCTGGCATT 58.607 50.000 0.00 0.00 0.00 3.56
8759 13025 1.334869 CCTTCGGTATTGCTGGCATTC 59.665 52.381 0.00 0.00 0.00 2.67
8760 13026 2.016318 CTTCGGTATTGCTGGCATTCA 58.984 47.619 0.00 0.00 0.00 2.57
8761 13027 1.667236 TCGGTATTGCTGGCATTCAG 58.333 50.000 0.00 0.00 46.03 3.02
8762 13028 1.065491 TCGGTATTGCTGGCATTCAGT 60.065 47.619 0.00 0.00 45.08 3.41
8763 13029 1.745087 CGGTATTGCTGGCATTCAGTT 59.255 47.619 0.00 0.00 45.08 3.16
8764 13030 2.478370 CGGTATTGCTGGCATTCAGTTG 60.478 50.000 0.00 0.00 45.08 3.16
8765 13031 2.493278 GGTATTGCTGGCATTCAGTTGT 59.507 45.455 0.00 0.00 45.08 3.32
8766 13032 3.056607 GGTATTGCTGGCATTCAGTTGTT 60.057 43.478 0.00 0.00 45.08 2.83
8767 13033 2.512485 TTGCTGGCATTCAGTTGTTG 57.488 45.000 0.00 0.00 45.08 3.33
8768 13034 0.032403 TGCTGGCATTCAGTTGTTGC 59.968 50.000 0.00 0.00 45.08 4.17
8772 13038 2.818350 GCATTCAGTTGTTGCCTGC 58.182 52.632 0.00 0.00 0.00 4.85
8773 13039 0.032403 GCATTCAGTTGTTGCCTGCA 59.968 50.000 0.00 0.00 35.36 4.41
8774 13040 1.933500 GCATTCAGTTGTTGCCTGCAG 60.934 52.381 6.78 6.78 35.36 4.41
8775 13041 1.610038 CATTCAGTTGTTGCCTGCAGA 59.390 47.619 17.39 0.00 0.00 4.26
8785 13051 2.796593 GTTGCCTGCAGATGTTTTGTTC 59.203 45.455 17.39 0.00 0.00 3.18
8847 13113 8.460831 TTTTTCCTTCTTTTCGTTTGAGAAAG 57.539 30.769 0.00 0.00 40.66 2.62
8850 13117 8.671384 TTCCTTCTTTTCGTTTGAGAAAGATA 57.329 30.769 0.00 0.00 40.66 1.98
8861 13128 9.706691 TCGTTTGAGAAAGATAGATTTACTGTT 57.293 29.630 0.00 0.00 0.00 3.16
8862 13129 9.959775 CGTTTGAGAAAGATAGATTTACTGTTC 57.040 33.333 0.00 0.00 0.00 3.18
8896 13163 8.766994 AATGCTTACCCAAGTTGTCATATATT 57.233 30.769 1.45 0.00 34.00 1.28
8973 13240 7.741027 AGCTGTCATATATGAACATTTCTGG 57.259 36.000 16.97 6.38 38.75 3.86
8987 13254 9.308000 TGAACATTTCTGGATTTTGTATAGGTT 57.692 29.630 0.00 0.00 0.00 3.50
8995 13271 7.829211 TCTGGATTTTGTATAGGTTCTTTGGAG 59.171 37.037 0.00 0.00 0.00 3.86
8996 13272 6.889722 TGGATTTTGTATAGGTTCTTTGGAGG 59.110 38.462 0.00 0.00 0.00 4.30
9002 13278 1.280457 AGGTTCTTTGGAGGAGCGAT 58.720 50.000 0.00 0.00 33.96 4.58
9032 13308 6.039270 TGTCAGTTCCAGTTCCTTGTTTATTG 59.961 38.462 0.00 0.00 0.00 1.90
9042 13318 8.025445 CAGTTCCTTGTTTATTGATCTTTGGAG 58.975 37.037 0.00 0.00 0.00 3.86
9071 13347 7.437862 TGCATTTTGTCTTAACCAAATGAGTTC 59.562 33.333 15.32 3.09 44.99 3.01
9072 13348 7.358352 GCATTTTGTCTTAACCAAATGAGTTCG 60.358 37.037 15.32 0.00 44.99 3.95
9100 13391 6.319048 ACTTCCATGGACTGAATATTGAGT 57.681 37.500 15.91 7.33 0.00 3.41
9101 13392 6.118170 ACTTCCATGGACTGAATATTGAGTG 58.882 40.000 15.91 0.00 0.00 3.51
9120 13411 4.576879 AGTGGTTAGGAAATTCCTTCGAC 58.423 43.478 20.79 18.44 46.91 4.20
9138 13429 4.087892 CCAGACGGGCCTCCAGTG 62.088 72.222 0.84 0.00 0.00 3.66
9144 13435 4.643387 GGGCCTCCAGTGTTGCGT 62.643 66.667 0.84 0.00 0.00 5.24
9200 13498 4.874199 ACCCACTTTCAACCTTTTCCTAA 58.126 39.130 0.00 0.00 0.00 2.69
9230 13528 6.549364 TGACCATTAAAAATGGATAGCCGAAT 59.451 34.615 22.29 0.00 41.64 3.34
9263 13561 2.107031 CTGGCCATGTTATCATCCCTGA 59.893 50.000 5.51 0.00 35.41 3.86
9486 13791 0.250295 CTGCCTTCCGTCAGTCCAAA 60.250 55.000 0.00 0.00 0.00 3.28
9491 13796 3.873910 CCTTCCGTCAGTCCAAACATAT 58.126 45.455 0.00 0.00 0.00 1.78
9615 13920 8.713737 ACGACGAGTATATATATGTAGAAGCA 57.286 34.615 0.00 0.00 0.00 3.91
9728 14033 4.099727 TGCATACCCGTTACAGCTTACATA 59.900 41.667 0.00 0.00 0.00 2.29
9729 14034 5.221561 TGCATACCCGTTACAGCTTACATAT 60.222 40.000 0.00 0.00 0.00 1.78
9743 14048 6.093219 CAGCTTACATATGATGTATGGAAGGC 59.907 42.308 17.31 11.54 44.51 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.428890 TGGGACACGTGCAGAAATTTTT 59.571 40.909 17.22 0.00 0.00 1.94
1 2 2.028130 TGGGACACGTGCAGAAATTTT 58.972 42.857 17.22 0.00 0.00 1.82
2 3 1.686355 TGGGACACGTGCAGAAATTT 58.314 45.000 17.22 0.00 0.00 1.82
3 4 1.686355 TTGGGACACGTGCAGAAATT 58.314 45.000 17.22 0.00 39.29 1.82
4 5 1.608590 CTTTGGGACACGTGCAGAAAT 59.391 47.619 17.22 0.00 39.29 2.17
5 6 1.021202 CTTTGGGACACGTGCAGAAA 58.979 50.000 17.22 8.76 39.29 2.52
6 7 0.817634 CCTTTGGGACACGTGCAGAA 60.818 55.000 17.22 0.25 39.29 3.02
7 8 1.227823 CCTTTGGGACACGTGCAGA 60.228 57.895 17.22 0.00 39.29 4.26
9 10 2.911928 TCCTTTGGGACACGTGCA 59.088 55.556 17.22 2.33 39.29 4.57
22 23 1.299976 GGCTTCGTGGATGGTCCTT 59.700 57.895 0.00 0.00 37.46 3.36
30 31 2.499693 TGACTATTCATGGCTTCGTGGA 59.500 45.455 0.00 0.00 0.00 4.02
67 68 5.982465 ACAAAATAAAAAGTGTTGCGCAT 57.018 30.435 12.75 0.00 0.00 4.73
95 96 3.683365 TGCACTTCTTCTATGTCTGCA 57.317 42.857 0.00 0.00 0.00 4.41
175 176 3.751479 AACCTTTTGCCCAATCTGTTC 57.249 42.857 0.00 0.00 0.00 3.18
176 177 4.082245 CGATAACCTTTTGCCCAATCTGTT 60.082 41.667 0.00 0.00 0.00 3.16
188 189 2.533266 CTACGCGGACGATAACCTTTT 58.467 47.619 12.47 0.00 43.93 2.27
196 197 1.299165 GTGATGCTACGCGGACGAT 60.299 57.895 12.47 0.00 43.93 3.73
202 203 1.350193 ACAAAGAGTGATGCTACGCG 58.650 50.000 3.53 3.53 0.00 6.01
205 206 5.955488 TCAGACTACAAAGAGTGATGCTAC 58.045 41.667 0.00 0.00 0.00 3.58
220 221 3.428198 GCATCATCGAGCATTCAGACTAC 59.572 47.826 0.00 0.00 0.00 2.73
224 225 2.904697 AGCATCATCGAGCATTCAGA 57.095 45.000 0.00 0.00 0.00 3.27
296 303 6.403309 GGCAGTTTCTCGAAAAAGGTAATAGG 60.403 42.308 0.00 0.00 31.33 2.57
297 304 6.543736 GGCAGTTTCTCGAAAAAGGTAATAG 58.456 40.000 0.00 0.00 31.33 1.73
319 326 4.380531 TGATTGAAGATGAATAGGACGGC 58.619 43.478 0.00 0.00 0.00 5.68
320 327 7.657354 TGTTATGATTGAAGATGAATAGGACGG 59.343 37.037 0.00 0.00 0.00 4.79
322 329 9.553064 ACTGTTATGATTGAAGATGAATAGGAC 57.447 33.333 0.00 0.00 0.00 3.85
370 380 9.778741 GGTCTATGACTATGAATGTAATTTCCA 57.221 33.333 0.00 0.00 32.06 3.53
371 381 9.778741 TGGTCTATGACTATGAATGTAATTTCC 57.221 33.333 0.00 0.00 32.06 3.13
382 1738 4.072839 CGCTAGGTGGTCTATGACTATGA 58.927 47.826 0.00 0.00 32.47 2.15
451 1807 2.043852 GCTCTGACGAGGGAGGGA 60.044 66.667 0.00 0.00 37.75 4.20
516 1872 1.369625 GTGCGTTGGTCTTATGAGGG 58.630 55.000 0.00 0.00 0.00 4.30
524 1880 0.532862 CTGTTCTGGTGCGTTGGTCT 60.533 55.000 0.00 0.00 0.00 3.85
563 1919 4.836825 TGGATCTTTTCGATCTGAGCTTT 58.163 39.130 0.00 0.00 46.33 3.51
597 1953 6.303054 TGTTTGGATCCAGTCTTTGTTCATA 58.697 36.000 15.53 0.00 0.00 2.15
617 1973 3.636764 GGTTGTCTTTGATGGGTCTGTTT 59.363 43.478 0.00 0.00 0.00 2.83
624 1980 0.881118 CGGTGGTTGTCTTTGATGGG 59.119 55.000 0.00 0.00 0.00 4.00
660 2017 1.006571 GAAGGTGTGTCTTCGGCGA 60.007 57.895 4.99 4.99 34.58 5.54
666 2023 1.680338 GGCTTGTGAAGGTGTGTCTT 58.320 50.000 0.00 0.00 0.00 3.01
752 2111 7.353497 CGTATCTACACGAATCTAACACAGAT 58.647 38.462 0.00 0.00 44.69 2.90
754 2113 6.954741 CGTATCTACACGAATCTAACACAG 57.045 41.667 0.00 0.00 44.69 3.66
766 2125 3.380486 AGACACGTTCGTATCTACACG 57.620 47.619 4.31 0.00 43.28 4.49
782 2141 1.202440 ACGCCAAAACGTGTCTAGACA 60.202 47.619 21.74 21.74 46.28 3.41
783 2142 1.494824 ACGCCAAAACGTGTCTAGAC 58.505 50.000 16.32 16.32 46.28 2.59
784 2143 3.972107 ACGCCAAAACGTGTCTAGA 57.028 47.368 0.00 0.00 46.28 2.43
792 2151 4.380382 ACGAATGAATTTAACGCCAAAACG 59.620 37.500 0.00 0.00 39.50 3.60
793 2152 5.815964 ACGAATGAATTTAACGCCAAAAC 57.184 34.783 0.00 0.00 0.00 2.43
794 2153 7.531716 AGATACGAATGAATTTAACGCCAAAA 58.468 30.769 0.00 0.00 0.00 2.44
795 2154 7.079182 AGATACGAATGAATTTAACGCCAAA 57.921 32.000 0.00 0.00 0.00 3.28
796 2155 6.671614 AGATACGAATGAATTTAACGCCAA 57.328 33.333 0.00 0.00 0.00 4.52
797 2156 7.204604 TCTAGATACGAATGAATTTAACGCCA 58.795 34.615 0.00 0.00 0.00 5.69
798 2157 7.619571 GCTCTAGATACGAATGAATTTAACGCC 60.620 40.741 0.00 0.00 0.00 5.68
799 2158 7.115095 AGCTCTAGATACGAATGAATTTAACGC 59.885 37.037 0.00 0.00 0.00 4.84
800 2159 8.508800 AGCTCTAGATACGAATGAATTTAACG 57.491 34.615 0.00 0.00 0.00 3.18
804 2163 9.994432 CAAAAAGCTCTAGATACGAATGAATTT 57.006 29.630 0.00 0.00 0.00 1.82
805 2164 8.616076 CCAAAAAGCTCTAGATACGAATGAATT 58.384 33.333 0.00 0.00 0.00 2.17
806 2165 7.987458 TCCAAAAAGCTCTAGATACGAATGAAT 59.013 33.333 0.00 0.00 0.00 2.57
807 2166 7.327975 TCCAAAAAGCTCTAGATACGAATGAA 58.672 34.615 0.00 0.00 0.00 2.57
808 2167 6.873997 TCCAAAAAGCTCTAGATACGAATGA 58.126 36.000 0.00 0.00 0.00 2.57
809 2168 7.721286 ATCCAAAAAGCTCTAGATACGAATG 57.279 36.000 0.00 0.00 0.00 2.67
810 2169 8.861086 TCTATCCAAAAAGCTCTAGATACGAAT 58.139 33.333 0.00 0.00 0.00 3.34
811 2170 8.234136 TCTATCCAAAAAGCTCTAGATACGAA 57.766 34.615 0.00 0.00 0.00 3.85
812 2171 7.502895 ACTCTATCCAAAAAGCTCTAGATACGA 59.497 37.037 0.00 0.00 0.00 3.43
813 2172 7.653647 ACTCTATCCAAAAAGCTCTAGATACG 58.346 38.462 0.00 0.00 0.00 3.06
814 2173 9.255304 CAACTCTATCCAAAAAGCTCTAGATAC 57.745 37.037 0.00 0.00 0.00 2.24
815 2174 9.201989 TCAACTCTATCCAAAAAGCTCTAGATA 57.798 33.333 0.00 0.00 0.00 1.98
816 2175 7.984617 GTCAACTCTATCCAAAAAGCTCTAGAT 59.015 37.037 0.00 0.00 0.00 1.98
817 2176 7.324178 GTCAACTCTATCCAAAAAGCTCTAGA 58.676 38.462 0.00 0.00 0.00 2.43
818 2177 6.254589 CGTCAACTCTATCCAAAAAGCTCTAG 59.745 42.308 0.00 0.00 0.00 2.43
819 2178 6.100004 CGTCAACTCTATCCAAAAAGCTCTA 58.900 40.000 0.00 0.00 0.00 2.43
820 2179 4.932200 CGTCAACTCTATCCAAAAAGCTCT 59.068 41.667 0.00 0.00 0.00 4.09
821 2180 4.436183 GCGTCAACTCTATCCAAAAAGCTC 60.436 45.833 0.00 0.00 0.00 4.09
822 2181 3.437049 GCGTCAACTCTATCCAAAAAGCT 59.563 43.478 0.00 0.00 0.00 3.74
823 2182 3.437049 AGCGTCAACTCTATCCAAAAAGC 59.563 43.478 0.00 0.00 0.00 3.51
824 2183 5.613358 AAGCGTCAACTCTATCCAAAAAG 57.387 39.130 0.00 0.00 0.00 2.27
825 2184 6.403200 GCATAAGCGTCAACTCTATCCAAAAA 60.403 38.462 0.00 0.00 0.00 1.94
826 2185 5.064707 GCATAAGCGTCAACTCTATCCAAAA 59.935 40.000 0.00 0.00 0.00 2.44
827 2186 4.570772 GCATAAGCGTCAACTCTATCCAAA 59.429 41.667 0.00 0.00 0.00 3.28
828 2187 4.119862 GCATAAGCGTCAACTCTATCCAA 58.880 43.478 0.00 0.00 0.00 3.53
829 2188 3.717707 GCATAAGCGTCAACTCTATCCA 58.282 45.455 0.00 0.00 0.00 3.41
850 2209 3.132824 GGGGATGGTGGCTTGATTTTAAG 59.867 47.826 0.00 0.00 0.00 1.85
851 2210 3.103742 GGGGATGGTGGCTTGATTTTAA 58.896 45.455 0.00 0.00 0.00 1.52
852 2211 2.314549 AGGGGATGGTGGCTTGATTTTA 59.685 45.455 0.00 0.00 0.00 1.52
853 2212 1.079323 AGGGGATGGTGGCTTGATTTT 59.921 47.619 0.00 0.00 0.00 1.82
854 2213 0.712380 AGGGGATGGTGGCTTGATTT 59.288 50.000 0.00 0.00 0.00 2.17
855 2214 1.607225 TAGGGGATGGTGGCTTGATT 58.393 50.000 0.00 0.00 0.00 2.57
856 2215 1.607225 TTAGGGGATGGTGGCTTGAT 58.393 50.000 0.00 0.00 0.00 2.57
857 2216 1.607225 ATTAGGGGATGGTGGCTTGA 58.393 50.000 0.00 0.00 0.00 3.02
858 2217 2.034124 CAATTAGGGGATGGTGGCTTG 58.966 52.381 0.00 0.00 0.00 4.01
859 2218 1.645919 ACAATTAGGGGATGGTGGCTT 59.354 47.619 0.00 0.00 0.00 4.35
860 2219 1.215423 GACAATTAGGGGATGGTGGCT 59.785 52.381 0.00 0.00 0.00 4.75
861 2220 1.064017 TGACAATTAGGGGATGGTGGC 60.064 52.381 0.00 0.00 0.00 5.01
862 2221 3.490348 GATGACAATTAGGGGATGGTGG 58.510 50.000 0.00 0.00 0.00 4.61
863 2222 3.139025 AGGATGACAATTAGGGGATGGTG 59.861 47.826 0.00 0.00 0.00 4.17
864 2223 3.407209 AGGATGACAATTAGGGGATGGT 58.593 45.455 0.00 0.00 0.00 3.55
865 2224 4.459852 AAGGATGACAATTAGGGGATGG 57.540 45.455 0.00 0.00 0.00 3.51
866 2225 7.896383 TTTAAAGGATGACAATTAGGGGATG 57.104 36.000 0.00 0.00 0.00 3.51
867 2226 8.909423 TTTTTAAAGGATGACAATTAGGGGAT 57.091 30.769 0.00 0.00 0.00 3.85
868 2227 8.909423 ATTTTTAAAGGATGACAATTAGGGGA 57.091 30.769 0.00 0.00 0.00 4.81
897 2256 5.705441 TGAGCGTCAACTCTATCCAATTTTT 59.295 36.000 0.00 0.00 37.58 1.94
898 2257 5.122396 GTGAGCGTCAACTCTATCCAATTTT 59.878 40.000 0.00 0.00 37.58 1.82
899 2258 4.631813 GTGAGCGTCAACTCTATCCAATTT 59.368 41.667 0.00 0.00 37.58 1.82
900 2259 4.184629 GTGAGCGTCAACTCTATCCAATT 58.815 43.478 0.00 0.00 37.58 2.32
901 2260 3.735208 CGTGAGCGTCAACTCTATCCAAT 60.735 47.826 0.00 0.00 37.58 3.16
902 2261 2.415491 CGTGAGCGTCAACTCTATCCAA 60.415 50.000 0.00 0.00 37.58 3.53
903 2262 1.132453 CGTGAGCGTCAACTCTATCCA 59.868 52.381 0.00 0.00 37.58 3.41
904 2263 1.828832 CGTGAGCGTCAACTCTATCC 58.171 55.000 0.00 0.00 37.58 2.59
924 2283 3.132824 GGGGATGGTGGCTTGATTTTAAG 59.867 47.826 0.00 0.00 0.00 1.85
925 2284 3.103742 GGGGATGGTGGCTTGATTTTAA 58.896 45.455 0.00 0.00 0.00 1.52
926 2285 2.314549 AGGGGATGGTGGCTTGATTTTA 59.685 45.455 0.00 0.00 0.00 1.52
927 2286 1.079323 AGGGGATGGTGGCTTGATTTT 59.921 47.619 0.00 0.00 0.00 1.82
928 2287 0.712380 AGGGGATGGTGGCTTGATTT 59.288 50.000 0.00 0.00 0.00 2.17
929 2288 1.607225 TAGGGGATGGTGGCTTGATT 58.393 50.000 0.00 0.00 0.00 2.57
930 2289 1.607225 TTAGGGGATGGTGGCTTGAT 58.393 50.000 0.00 0.00 0.00 2.57
931 2290 1.607225 ATTAGGGGATGGTGGCTTGA 58.393 50.000 0.00 0.00 0.00 3.02
932 2291 2.459555 AATTAGGGGATGGTGGCTTG 57.540 50.000 0.00 0.00 0.00 4.01
933 2292 3.245948 TGAAAATTAGGGGATGGTGGCTT 60.246 43.478 0.00 0.00 0.00 4.35
934 2293 2.314549 TGAAAATTAGGGGATGGTGGCT 59.685 45.455 0.00 0.00 0.00 4.75
935 2294 2.745968 TGAAAATTAGGGGATGGTGGC 58.254 47.619 0.00 0.00 0.00 5.01
936 2295 3.897505 GGATGAAAATTAGGGGATGGTGG 59.102 47.826 0.00 0.00 0.00 4.61
937 2296 4.808042 AGGATGAAAATTAGGGGATGGTG 58.192 43.478 0.00 0.00 0.00 4.17
938 2297 6.606241 TTAGGATGAAAATTAGGGGATGGT 57.394 37.500 0.00 0.00 0.00 3.55
939 2298 7.912778 TTTTAGGATGAAAATTAGGGGATGG 57.087 36.000 0.00 0.00 0.00 3.51
967 2326 9.424319 GGGAAGACTTTTTGAGGAATTTTTATC 57.576 33.333 0.00 0.00 0.00 1.75
968 2327 8.375506 GGGGAAGACTTTTTGAGGAATTTTTAT 58.624 33.333 0.00 0.00 0.00 1.40
969 2328 7.202056 GGGGGAAGACTTTTTGAGGAATTTTTA 60.202 37.037 0.00 0.00 0.00 1.52
970 2329 6.409234 GGGGGAAGACTTTTTGAGGAATTTTT 60.409 38.462 0.00 0.00 0.00 1.94
971 2330 5.071788 GGGGGAAGACTTTTTGAGGAATTTT 59.928 40.000 0.00 0.00 0.00 1.82
972 2331 4.593206 GGGGGAAGACTTTTTGAGGAATTT 59.407 41.667 0.00 0.00 0.00 1.82
973 2332 4.160329 GGGGGAAGACTTTTTGAGGAATT 58.840 43.478 0.00 0.00 0.00 2.17
974 2333 3.779444 GGGGGAAGACTTTTTGAGGAAT 58.221 45.455 0.00 0.00 0.00 3.01
975 2334 3.238788 GGGGGAAGACTTTTTGAGGAA 57.761 47.619 0.00 0.00 0.00 3.36
976 2335 2.971901 GGGGGAAGACTTTTTGAGGA 57.028 50.000 0.00 0.00 0.00 3.71
993 2352 1.140052 GGTCTGGTTTTGTTTTGGGGG 59.860 52.381 0.00 0.00 0.00 5.40
994 2353 1.140052 GGGTCTGGTTTTGTTTTGGGG 59.860 52.381 0.00 0.00 0.00 4.96
995 2354 1.140052 GGGGTCTGGTTTTGTTTTGGG 59.860 52.381 0.00 0.00 0.00 4.12
1007 2366 1.218316 GTGCTAGAACGGGGTCTGG 59.782 63.158 0.00 0.00 0.00 3.86
1033 2392 2.422235 CCCGGATACTCTCTCTCTGTGT 60.422 54.545 0.73 0.00 0.00 3.72
1195 2560 3.916392 AAACTGACGAGCCGAGCCG 62.916 63.158 1.50 0.00 0.00 5.52
1196 2561 2.048127 AAACTGACGAGCCGAGCC 60.048 61.111 1.50 0.00 0.00 4.70
1197 2562 2.095252 GGAAACTGACGAGCCGAGC 61.095 63.158 1.50 0.00 0.00 5.03
1292 2659 0.393944 GGGGAGACGGGAATGGAAAC 60.394 60.000 0.00 0.00 0.00 2.78
1446 2824 3.467803 GGTATTAATTGCTGCCGAGACT 58.532 45.455 0.00 0.00 0.00 3.24
1449 2827 1.531149 CGGGTATTAATTGCTGCCGAG 59.469 52.381 0.00 0.00 0.00 4.63
1479 2857 2.900838 GAGATCTCGGGCCGACGA 60.901 66.667 27.46 25.05 41.13 4.20
1533 2911 1.938657 ATCTCAGGACACGACAGCGG 61.939 60.000 0.00 0.00 43.17 5.52
1566 2944 1.143373 TTCATCGCCGATTCGAACCG 61.143 55.000 4.49 4.49 42.15 4.44
1724 3102 4.187810 GGCGCATAACCAACCGGC 62.188 66.667 10.83 0.00 39.00 6.13
1726 3104 1.711060 AATCGGCGCATAACCAACCG 61.711 55.000 10.83 0.00 45.15 4.44
1778 3156 4.394712 CCTCACCTCACCGCCCAC 62.395 72.222 0.00 0.00 0.00 4.61
1841 3233 3.920553 CCGGGTTAATCGCACGCG 61.921 66.667 3.53 3.53 46.86 6.01
1872 3264 6.611613 TTTACAGGTTGAGTGAGATCTCAT 57.388 37.500 27.51 16.39 42.84 2.90
1883 3275 4.481930 TCAAACGCATTTACAGGTTGAG 57.518 40.909 0.00 0.00 36.76 3.02
1884 3276 3.880490 ACTCAAACGCATTTACAGGTTGA 59.120 39.130 0.00 0.00 39.02 3.18
1885 3277 3.974401 CACTCAAACGCATTTACAGGTTG 59.026 43.478 0.00 0.00 34.16 3.77
1886 3278 3.550030 GCACTCAAACGCATTTACAGGTT 60.550 43.478 0.00 0.00 0.00 3.50
1939 3331 2.625823 CCGCGCAATCACCAAACCT 61.626 57.895 8.75 0.00 0.00 3.50
1974 3366 0.828762 TCTGGCATGGCAAAGCTGTT 60.829 50.000 23.47 0.00 0.00 3.16
1997 3389 5.357878 CCAAGCACCAGTACATCAACATTAT 59.642 40.000 0.00 0.00 0.00 1.28
2001 3393 2.158682 ACCAAGCACCAGTACATCAACA 60.159 45.455 0.00 0.00 0.00 3.33
2017 3409 4.596585 ACCACGGGGCCAACCAAG 62.597 66.667 1.73 0.00 42.91 3.61
2018 3410 2.294170 TAAACCACGGGGCCAACCAA 62.294 55.000 1.73 0.00 42.91 3.67
2021 3413 0.245266 CAATAAACCACGGGGCCAAC 59.755 55.000 1.73 0.00 37.90 3.77
2068 3460 4.576463 GGGCAAATAGTACCTGACTGATTG 59.424 45.833 0.00 0.00 39.39 2.67
2167 3559 2.228103 CTGTTGTGCATGATGAACTGCT 59.772 45.455 4.97 0.00 39.16 4.24
2188 3580 0.312102 GGTGCACAGTGAAAAGCCTC 59.688 55.000 20.43 0.00 0.00 4.70
2207 3599 4.683832 AGAAACGGATACTGAATCGAAGG 58.316 43.478 0.00 0.00 35.21 3.46
2212 3604 7.115663 GCTATCTCAAGAAACGGATACTGAATC 59.884 40.741 0.00 0.00 0.00 2.52
2217 3609 4.579340 TCGCTATCTCAAGAAACGGATACT 59.421 41.667 0.00 0.00 0.00 2.12
2224 3616 4.486090 TGTCACTCGCTATCTCAAGAAAC 58.514 43.478 0.00 0.00 0.00 2.78
2240 3632 8.687292 ATATGCATTGATACAGATTTGTCACT 57.313 30.769 3.54 0.00 38.76 3.41
2304 3696 8.559301 CATATGGGTATGGAGGTGAAAGCTTTT 61.559 40.741 14.05 0.00 36.61 2.27
2306 3698 5.691167 CATATGGGTATGGAGGTGAAAGCTT 60.691 44.000 0.00 0.00 36.61 3.74
2308 3700 2.736670 ATGGGTATGGAGGTGAAAGC 57.263 50.000 0.00 0.00 0.00 3.51
2309 3701 5.072329 ACTCATATGGGTATGGAGGTGAAAG 59.928 44.000 6.40 0.00 38.57 2.62
2310 3702 4.975147 ACTCATATGGGTATGGAGGTGAAA 59.025 41.667 6.40 0.00 38.57 2.69
2311 3703 4.566837 ACTCATATGGGTATGGAGGTGAA 58.433 43.478 6.40 0.00 38.57 3.18
2312 3704 4.213531 ACTCATATGGGTATGGAGGTGA 57.786 45.455 6.40 0.00 38.57 4.02
2313 3705 4.645535 CAACTCATATGGGTATGGAGGTG 58.354 47.826 9.10 0.00 38.57 4.00
2314 3706 3.073062 GCAACTCATATGGGTATGGAGGT 59.927 47.826 9.10 0.00 38.57 3.85
2315 3707 3.328931 AGCAACTCATATGGGTATGGAGG 59.671 47.826 9.10 0.00 38.57 4.30
2316 3708 4.040829 TCAGCAACTCATATGGGTATGGAG 59.959 45.833 9.10 0.00 38.57 3.86
2317 3709 3.973305 TCAGCAACTCATATGGGTATGGA 59.027 43.478 9.10 2.07 38.57 3.41
2318 3710 4.356405 TCAGCAACTCATATGGGTATGG 57.644 45.455 9.10 3.17 38.57 2.74
2319 3711 5.182570 CCAATCAGCAACTCATATGGGTATG 59.817 44.000 9.10 10.57 39.25 2.39
2320 3712 5.163055 ACCAATCAGCAACTCATATGGGTAT 60.163 40.000 9.10 0.00 0.00 2.73
2321 3713 4.165950 ACCAATCAGCAACTCATATGGGTA 59.834 41.667 9.10 0.00 0.00 3.69
2322 3714 3.053395 ACCAATCAGCAACTCATATGGGT 60.053 43.478 1.15 1.15 0.00 4.51
2323 3715 3.559069 ACCAATCAGCAACTCATATGGG 58.441 45.455 0.00 0.00 0.00 4.00
2324 3716 5.371526 AGTACCAATCAGCAACTCATATGG 58.628 41.667 2.13 0.00 0.00 2.74
2372 3802 8.766994 AGGGCATTTCTTTATTCATTTAGCTA 57.233 30.769 0.00 0.00 0.00 3.32
2448 3878 2.601804 TGTCATATGTCGACCAACACG 58.398 47.619 14.12 0.00 32.15 4.49
2454 3933 2.863740 TCGCATTTGTCATATGTCGACC 59.136 45.455 14.12 0.00 31.58 4.79
2455 3934 3.602491 GCTCGCATTTGTCATATGTCGAC 60.602 47.826 9.11 9.11 32.43 4.20
2456 3935 2.539688 GCTCGCATTTGTCATATGTCGA 59.460 45.455 15.82 15.82 33.70 4.20
2457 3936 2.284952 TGCTCGCATTTGTCATATGTCG 59.715 45.455 1.90 8.67 0.00 4.35
2458 3937 3.950087 TGCTCGCATTTGTCATATGTC 57.050 42.857 1.90 0.00 0.00 3.06
2459 3938 4.261322 GGAATGCTCGCATTTGTCATATGT 60.261 41.667 17.24 0.00 45.50 2.29
2460 3939 4.224433 GGAATGCTCGCATTTGTCATATG 58.776 43.478 17.24 0.00 45.50 1.78
2461 3940 3.254166 GGGAATGCTCGCATTTGTCATAT 59.746 43.478 17.24 0.00 45.50 1.78
2462 3941 2.618241 GGGAATGCTCGCATTTGTCATA 59.382 45.455 17.24 0.00 45.50 2.15
2463 3942 1.406539 GGGAATGCTCGCATTTGTCAT 59.593 47.619 17.24 0.00 45.50 3.06
2464 3943 0.810648 GGGAATGCTCGCATTTGTCA 59.189 50.000 17.24 0.00 45.50 3.58
2465 3944 1.064654 GAGGGAATGCTCGCATTTGTC 59.935 52.381 17.24 10.92 45.50 3.18
2466 3945 1.098050 GAGGGAATGCTCGCATTTGT 58.902 50.000 17.24 6.35 45.50 2.83
2467 3946 1.097232 TGAGGGAATGCTCGCATTTG 58.903 50.000 17.24 0.00 45.50 2.32
2468 3947 1.098050 GTGAGGGAATGCTCGCATTT 58.902 50.000 17.24 3.07 45.50 2.32
2470 3949 0.463295 CAGTGAGGGAATGCTCGCAT 60.463 55.000 0.00 0.00 36.98 4.73
2471 3950 1.078918 CAGTGAGGGAATGCTCGCA 60.079 57.895 0.00 0.00 36.98 5.10
2472 3951 2.467826 GCAGTGAGGGAATGCTCGC 61.468 63.158 0.00 0.00 37.00 5.03
2473 3952 0.463295 ATGCAGTGAGGGAATGCTCG 60.463 55.000 0.00 0.00 40.62 5.03
2474 3953 1.022735 CATGCAGTGAGGGAATGCTC 58.977 55.000 0.00 0.00 40.62 4.26
2475 3954 0.622136 TCATGCAGTGAGGGAATGCT 59.378 50.000 0.00 0.00 40.62 3.79
2476 3955 1.466856 TTCATGCAGTGAGGGAATGC 58.533 50.000 0.00 0.00 38.29 3.56
2477 3956 4.730949 AATTTCATGCAGTGAGGGAATG 57.269 40.909 0.00 0.00 38.29 2.67
2478 3957 5.622914 CGAAAATTTCATGCAGTGAGGGAAT 60.623 40.000 6.53 0.00 38.29 3.01
2479 3958 4.321156 CGAAAATTTCATGCAGTGAGGGAA 60.321 41.667 6.53 0.00 38.29 3.97
2480 3959 3.191162 CGAAAATTTCATGCAGTGAGGGA 59.809 43.478 6.53 0.00 38.29 4.20
2481 3960 3.057315 ACGAAAATTTCATGCAGTGAGGG 60.057 43.478 6.53 0.00 38.29 4.30
2482 3961 4.161333 GACGAAAATTTCATGCAGTGAGG 58.839 43.478 6.53 0.00 38.29 3.86
2483 3962 4.786507 TGACGAAAATTTCATGCAGTGAG 58.213 39.130 6.53 0.00 38.29 3.51
2484 3963 4.827304 TGACGAAAATTTCATGCAGTGA 57.173 36.364 6.53 0.00 34.25 3.41
2485 3964 6.197655 CCATATGACGAAAATTTCATGCAGTG 59.802 38.462 3.65 4.40 34.28 3.66
2486 3965 6.127647 ACCATATGACGAAAATTTCATGCAGT 60.128 34.615 3.65 0.00 34.28 4.40
2487 3966 6.267817 ACCATATGACGAAAATTTCATGCAG 58.732 36.000 3.65 0.00 34.28 4.41
2488 3967 6.206395 ACCATATGACGAAAATTTCATGCA 57.794 33.333 3.65 0.00 34.28 3.96
2489 3968 7.639039 TCTACCATATGACGAAAATTTCATGC 58.361 34.615 3.65 0.00 34.28 4.06
2490 3969 9.045223 TCTCTACCATATGACGAAAATTTCATG 57.955 33.333 3.65 1.87 34.28 3.07
2491 3970 9.784531 ATCTCTACCATATGACGAAAATTTCAT 57.215 29.630 3.65 0.00 36.43 2.57
2492 3971 9.261180 GATCTCTACCATATGACGAAAATTTCA 57.739 33.333 3.65 0.00 0.00 2.69
2493 3972 9.261180 TGATCTCTACCATATGACGAAAATTTC 57.739 33.333 3.65 0.00 0.00 2.17
2494 3973 9.046296 GTGATCTCTACCATATGACGAAAATTT 57.954 33.333 3.65 0.00 0.00 1.82
2495 3974 8.424918 AGTGATCTCTACCATATGACGAAAATT 58.575 33.333 3.65 0.00 0.00 1.82
2496 3975 7.869937 CAGTGATCTCTACCATATGACGAAAAT 59.130 37.037 3.65 0.00 0.00 1.82
2497 3976 7.147897 ACAGTGATCTCTACCATATGACGAAAA 60.148 37.037 3.65 0.00 0.00 2.29
2498 3977 6.321435 ACAGTGATCTCTACCATATGACGAAA 59.679 38.462 3.65 0.00 0.00 3.46
2499 3978 5.828328 ACAGTGATCTCTACCATATGACGAA 59.172 40.000 3.65 0.00 0.00 3.85
2500 3979 5.239525 CACAGTGATCTCTACCATATGACGA 59.760 44.000 3.65 0.00 0.00 4.20
2501 3980 5.456265 CACAGTGATCTCTACCATATGACG 58.544 45.833 3.65 0.00 0.00 4.35
2555 4034 7.483307 TGCTGGATATTCTTCAATTAACAAGC 58.517 34.615 0.00 0.00 0.00 4.01
2633 4112 0.601558 AGAAGCTTGTGCATGCAAGG 59.398 50.000 24.58 15.92 44.29 3.61
2794 4273 3.117851 CCTTTTCTCCAGGATTAGGGGAC 60.118 52.174 0.00 0.00 34.73 4.46
2814 4293 7.173907 CACTGACAGAAGTTTTTATCACATCCT 59.826 37.037 10.08 0.00 0.00 3.24
2856 4335 6.265422 AGTTTTTACCACATCCTTTTCTCCAG 59.735 38.462 0.00 0.00 0.00 3.86
2857 4336 6.133356 AGTTTTTACCACATCCTTTTCTCCA 58.867 36.000 0.00 0.00 0.00 3.86
2859 4338 7.862873 CAGAAGTTTTTACCACATCCTTTTCTC 59.137 37.037 0.00 0.00 0.00 2.87
2860 4339 7.342026 ACAGAAGTTTTTACCACATCCTTTTCT 59.658 33.333 0.00 0.00 0.00 2.52
2862 4341 7.123547 TGACAGAAGTTTTTACCACATCCTTTT 59.876 33.333 0.00 0.00 0.00 2.27
2864 4343 6.126409 TGACAGAAGTTTTTACCACATCCTT 58.874 36.000 0.00 0.00 0.00 3.36
2866 4345 5.531287 ACTGACAGAAGTTTTTACCACATCC 59.469 40.000 10.08 0.00 0.00 3.51
2867 4346 6.260050 TCACTGACAGAAGTTTTTACCACATC 59.740 38.462 10.08 0.00 0.00 3.06
2869 4348 5.492895 TCACTGACAGAAGTTTTTACCACA 58.507 37.500 10.08 0.00 0.00 4.17
2870 4349 6.315393 TCTTCACTGACAGAAGTTTTTACCAC 59.685 38.462 10.08 0.00 42.35 4.16
2871 4350 6.411376 TCTTCACTGACAGAAGTTTTTACCA 58.589 36.000 10.08 0.00 42.35 3.25
2873 4352 7.254488 GGACTCTTCACTGACAGAAGTTTTTAC 60.254 40.741 10.08 0.00 42.35 2.01
2874 4353 6.761714 GGACTCTTCACTGACAGAAGTTTTTA 59.238 38.462 10.08 0.00 42.35 1.52
2879 4358 2.630580 GGGACTCTTCACTGACAGAAGT 59.369 50.000 10.08 4.42 42.35 3.01
2880 4359 2.028567 GGGGACTCTTCACTGACAGAAG 60.029 54.545 10.08 3.75 42.94 2.85
2882 4361 1.148027 AGGGGACTCTTCACTGACAGA 59.852 52.381 10.08 0.00 32.90 3.41
2883 4362 1.638529 AGGGGACTCTTCACTGACAG 58.361 55.000 0.00 0.00 32.90 3.51
2884 4363 2.992847 TAGGGGACTCTTCACTGACA 57.007 50.000 0.00 0.00 43.67 3.58
2885 4364 4.957327 AGTATTAGGGGACTCTTCACTGAC 59.043 45.833 0.00 0.00 43.67 3.51
2887 4366 4.100189 CCAGTATTAGGGGACTCTTCACTG 59.900 50.000 0.00 0.00 43.67 3.66
2889 4368 4.287552 TCCAGTATTAGGGGACTCTTCAC 58.712 47.826 0.00 0.00 43.67 3.18
2890 4369 4.232122 TCTCCAGTATTAGGGGACTCTTCA 59.768 45.833 0.00 0.00 43.67 3.02
2891 4370 4.805744 TCTCCAGTATTAGGGGACTCTTC 58.194 47.826 0.00 0.00 43.67 2.87
2892 4371 4.901785 TCTCCAGTATTAGGGGACTCTT 57.098 45.455 0.00 0.00 43.67 2.85
2893 4372 4.901785 TTCTCCAGTATTAGGGGACTCT 57.098 45.455 0.00 0.00 43.67 3.24
2894 4373 5.163290 CCTTTTCTCCAGTATTAGGGGACTC 60.163 48.000 0.00 0.00 43.67 3.36
2895 4374 8.723924 ACCCTTTTCTCCAGTATTAGGGGACT 62.724 46.154 0.00 0.00 44.13 3.85
2897 4376 4.045022 CCCTTTTCTCCAGTATTAGGGGA 58.955 47.826 0.00 0.00 37.72 4.81
2900 4379 5.693769 TCACCCTTTTCTCCAGTATTAGG 57.306 43.478 0.00 0.00 0.00 2.69
2901 4380 6.947464 TCTTCACCCTTTTCTCCAGTATTAG 58.053 40.000 0.00 0.00 0.00 1.73
2902 4381 6.945636 TCTTCACCCTTTTCTCCAGTATTA 57.054 37.500 0.00 0.00 0.00 0.98
2903 4382 5.843019 TCTTCACCCTTTTCTCCAGTATT 57.157 39.130 0.00 0.00 0.00 1.89
2905 4384 4.844085 TCATCTTCACCCTTTTCTCCAGTA 59.156 41.667 0.00 0.00 0.00 2.74
2906 4385 3.652869 TCATCTTCACCCTTTTCTCCAGT 59.347 43.478 0.00 0.00 0.00 4.00
2941 4420 6.575162 ACGCTCAATATTTCTGTTTTCCTT 57.425 33.333 0.00 0.00 0.00 3.36
2956 4435 9.394477 GAATTTACTGTTTCTTTTACGCTCAAT 57.606 29.630 0.00 0.00 0.00 2.57
2960 4439 7.375017 CGTTGAATTTACTGTTTCTTTTACGCT 59.625 33.333 0.00 0.00 0.00 5.07
2985 4464 3.182182 TCATCGCTTGAATTCTCACTCG 58.818 45.455 7.05 3.82 0.00 4.18
3029 4508 5.966935 TGAGATCCTTTTCTGGGTTATCTCT 59.033 40.000 0.00 0.00 36.24 3.10
3098 4577 5.392767 TTCACAGTCTGGTCTGAATCTAC 57.607 43.478 4.53 0.00 38.63 2.59
3189 4668 3.264947 TGATCAGAAGAACGCCTCATTG 58.735 45.455 0.00 0.00 0.00 2.82
3306 4785 3.552699 GCGGCGTATAAATGTTGACACTA 59.447 43.478 9.37 0.00 0.00 2.74
3369 4848 5.771153 TGCTGAAACATCATTCTTGTCAA 57.229 34.783 0.00 0.00 0.00 3.18
3384 4863 1.068895 CACCATTGCCACTTGCTGAAA 59.931 47.619 0.00 0.00 42.00 2.69
3433 5021 5.106118 GGATTTCTTCTGTACCTCTTTTGGC 60.106 44.000 0.00 0.00 0.00 4.52
3749 5337 2.681848 CTCCAATCAGCAGGTCATTGAC 59.318 50.000 8.34 8.34 30.31 3.18
3955 5543 6.943718 TCATTTTGTAAAACCTATCCTTCGGT 59.056 34.615 0.00 0.00 34.27 4.69
4130 5718 3.458189 AGTCAGACAAAACCAAGAGTCG 58.542 45.455 2.66 0.00 36.18 4.18
4268 5856 7.342284 TCCACAAAATGTTAAGGAAGGTAACAA 59.658 33.333 1.51 0.00 42.92 2.83
4272 5860 8.164733 TGTATCCACAAAATGTTAAGGAAGGTA 58.835 33.333 0.00 0.00 0.00 3.08
4663 6251 4.080919 TGCTTCTGTAGTCAACATGCCTAT 60.081 41.667 0.00 0.00 37.50 2.57
4966 6682 3.626670 GGCAATCAAGAGATGAGAACCAG 59.373 47.826 0.00 0.00 42.53 4.00
5147 7246 1.790755 GACCACATGTCACTAACGCA 58.209 50.000 0.00 0.00 43.85 5.24
5272 7371 0.894835 GTATGGTGGCCTTTGGTTGG 59.105 55.000 3.32 0.00 0.00 3.77
5356 7455 7.396339 ACAGAAACATATAGGTTCCCCTTTTTC 59.604 37.037 2.81 0.00 45.37 2.29
5500 7600 5.820404 AAGGTCTTATATTAGGGAACGGG 57.180 43.478 0.00 0.00 0.00 5.28
5576 7676 9.438228 TTCGTATGTATCCAAACACATTTTAGA 57.562 29.630 0.00 0.00 36.74 2.10
5580 7680 8.275015 TGATTCGTATGTATCCAAACACATTT 57.725 30.769 0.00 0.00 36.74 2.32
5584 7684 7.534085 TCTTGATTCGTATGTATCCAAACAC 57.466 36.000 0.00 0.00 30.75 3.32
5588 7688 8.181573 GCTTTTTCTTGATTCGTATGTATCCAA 58.818 33.333 0.00 0.00 0.00 3.53
5590 7690 7.920738 AGCTTTTTCTTGATTCGTATGTATCC 58.079 34.615 0.00 0.00 0.00 2.59
5626 7726 1.858246 ACTCCCTCCGTTCCCTACTAT 59.142 52.381 0.00 0.00 0.00 2.12
5629 7729 2.378378 ATACTCCCTCCGTTCCCTAC 57.622 55.000 0.00 0.00 0.00 3.18
5631 7731 2.890814 CATATACTCCCTCCGTTCCCT 58.109 52.381 0.00 0.00 0.00 4.20
5632 7732 1.275573 GCATATACTCCCTCCGTTCCC 59.724 57.143 0.00 0.00 0.00 3.97
5757 9108 4.862641 TCCTTTAAGCTGCCCTTTCTAT 57.137 40.909 0.00 0.00 34.95 1.98
5858 9209 8.230486 AGATAAGTTGAGTTTATTTCTTGCACG 58.770 33.333 0.00 0.00 0.00 5.34
5891 9242 9.088987 AGACCCATGTTATTTGTTTGAAATAGT 57.911 29.630 0.00 0.00 0.00 2.12
6017 9685 4.212847 CGACCATACACTAGTACGCACTAT 59.787 45.833 0.00 0.00 36.66 2.12
6018 9686 3.557185 CGACCATACACTAGTACGCACTA 59.443 47.826 0.00 0.00 36.14 2.74
6033 9701 6.153851 TCTGATGTAAAAGGACTTCGACCATA 59.846 38.462 0.00 0.00 0.00 2.74
6070 9738 6.658188 ACTAGTTCTGCCTTCTATATGACC 57.342 41.667 0.00 0.00 0.00 4.02
6114 9934 6.648879 AAGTTTCAATCATTTCTTCCGGAA 57.351 33.333 17.73 17.73 0.00 4.30
6293 10125 2.309613 TGGCAGCCCTTTATTGCATAG 58.690 47.619 9.64 0.00 39.54 2.23
6475 10307 4.630111 ACGGTGTTTTAAATAGGACGTCA 58.370 39.130 18.91 0.00 0.00 4.35
6479 10311 8.077386 TCAAAATGACGGTGTTTTAAATAGGAC 58.923 33.333 0.00 0.00 0.00 3.85
6481 10313 8.696175 GTTCAAAATGACGGTGTTTTAAATAGG 58.304 33.333 0.00 0.00 0.00 2.57
6654 10521 1.792949 GTCGAACGACTCAAAGTGCAT 59.207 47.619 18.12 0.00 41.57 3.96
6710 10577 0.394899 GGGCAGCTGGCTCACTTATT 60.395 55.000 35.64 0.00 44.81 1.40
6872 10843 4.219944 AGTCGACATGGTACTGTAACACAT 59.780 41.667 19.50 0.00 0.00 3.21
6923 10894 7.400339 TCCAAGGTTGAGACTCATAGACTAATT 59.600 37.037 5.87 0.00 0.00 1.40
7027 10998 3.320541 CACCTGCAATTACAAACAAGGGA 59.679 43.478 0.00 0.00 0.00 4.20
7028 10999 3.554752 CCACCTGCAATTACAAACAAGGG 60.555 47.826 0.00 0.00 0.00 3.95
7283 11254 5.169295 AGAACGGTAAATACTCAAGAGCAC 58.831 41.667 0.00 0.00 0.00 4.40
7286 11257 5.869888 AGCAAGAACGGTAAATACTCAAGAG 59.130 40.000 0.00 0.00 0.00 2.85
7321 11292 4.062293 CAAATTCTGGTACCGAACAGTCA 58.938 43.478 17.54 0.30 36.17 3.41
7384 11355 4.330894 ACATGTCAATGTGCTAGATGTTCG 59.669 41.667 0.00 0.00 45.51 3.95
7459 11434 0.808060 GTTTCGAGCAGCTCTAGGGC 60.808 60.000 20.39 6.45 0.00 5.19
7559 11534 4.019792 TGACACACAAGAATAGCACCAT 57.980 40.909 0.00 0.00 0.00 3.55
7563 11538 5.869344 GTCACTATGACACACAAGAATAGCA 59.131 40.000 4.08 0.00 46.22 3.49
7670 11882 2.167487 TGGTTGACCCTTTTTGAAGCAC 59.833 45.455 0.00 0.00 34.29 4.40
7705 11918 2.877786 TGAGTGTTAATGCACCACACAG 59.122 45.455 21.02 0.00 42.81 3.66
7866 12079 8.296713 GCCTTCAAATTATTGGATAAAGCGATA 58.703 33.333 0.00 0.00 37.15 2.92
7894 12107 3.323751 AACCACCTCACATACCGTTAC 57.676 47.619 0.00 0.00 0.00 2.50
7965 12178 1.555967 TCCCTTAATTTGCTGGGCAC 58.444 50.000 0.00 0.00 38.71 5.01
7972 12185 2.959507 ACCGCATTCCCTTAATTTGC 57.040 45.000 0.00 0.00 0.00 3.68
8004 12217 1.331756 GGCCGATGTCACATCATCAAC 59.668 52.381 18.05 1.79 42.82 3.18
8061 12274 4.870426 CGCCAATCTGTCAAGTAGTAACAT 59.130 41.667 0.00 0.00 0.00 2.71
8188 12401 2.157738 ACTGATGCTCAACTTCTTGCC 58.842 47.619 0.00 0.00 0.00 4.52
8217 12434 5.640147 TGGACCATGAGTTTCCAAGTTAAT 58.360 37.500 0.00 0.00 36.45 1.40
8219 12436 4.715534 TGGACCATGAGTTTCCAAGTTA 57.284 40.909 0.00 0.00 36.45 2.24
8220 12437 3.593442 TGGACCATGAGTTTCCAAGTT 57.407 42.857 0.00 0.00 36.45 2.66
8329 12586 5.470368 TCTGTCTCATTCTTACCAAAGTCG 58.530 41.667 0.00 0.00 34.13 4.18
8335 12592 6.719829 TCAGTACTTCTGTCTCATTCTTACCA 59.280 38.462 0.00 0.00 43.97 3.25
8516 12775 6.350864 CCACAAATCTTTGGGCAACATGTATA 60.351 38.462 0.00 0.00 40.21 1.47
8592 12853 9.426837 CACAAATCCACAATACATGAAAATTCT 57.573 29.630 0.00 0.00 0.00 2.40
8608 12869 0.240945 CCAGTTCGCCACAAATCCAC 59.759 55.000 0.00 0.00 0.00 4.02
8686 12952 2.703007 GCAGTCCCAGGAACAGAGATAT 59.297 50.000 0.00 0.00 0.00 1.63
8757 13023 1.610038 CATCTGCAGGCAACAACTGAA 59.390 47.619 15.13 0.00 38.20 3.02
8758 13024 1.241165 CATCTGCAGGCAACAACTGA 58.759 50.000 15.13 0.00 38.20 3.41
8759 13025 0.956633 ACATCTGCAGGCAACAACTG 59.043 50.000 15.13 1.96 38.95 3.16
8760 13026 1.696063 AACATCTGCAGGCAACAACT 58.304 45.000 15.13 0.00 41.41 3.16
8761 13027 2.514205 AAACATCTGCAGGCAACAAC 57.486 45.000 15.13 0.00 41.41 3.32
8762 13028 2.168106 ACAAAACATCTGCAGGCAACAA 59.832 40.909 15.13 0.00 41.41 2.83
8763 13029 1.755959 ACAAAACATCTGCAGGCAACA 59.244 42.857 15.13 0.00 41.41 3.33
8764 13030 2.514205 ACAAAACATCTGCAGGCAAC 57.486 45.000 15.13 0.00 0.00 4.17
8765 13031 2.543445 CGAACAAAACATCTGCAGGCAA 60.543 45.455 15.13 0.00 0.00 4.52
8766 13032 1.001487 CGAACAAAACATCTGCAGGCA 60.001 47.619 15.13 0.00 0.00 4.75
8767 13033 1.689959 CGAACAAAACATCTGCAGGC 58.310 50.000 15.13 0.00 0.00 4.85
8768 13034 1.267806 AGCGAACAAAACATCTGCAGG 59.732 47.619 15.13 0.36 0.00 4.85
8769 13035 2.031769 TCAGCGAACAAAACATCTGCAG 60.032 45.455 7.63 7.63 0.00 4.41
8770 13036 1.946081 TCAGCGAACAAAACATCTGCA 59.054 42.857 0.00 0.00 0.00 4.41
8771 13037 2.686558 TCAGCGAACAAAACATCTGC 57.313 45.000 0.00 0.00 0.00 4.26
8772 13038 2.912967 GCATCAGCGAACAAAACATCTG 59.087 45.455 0.00 0.00 0.00 2.90
8773 13039 2.095059 GGCATCAGCGAACAAAACATCT 60.095 45.455 0.00 0.00 43.41 2.90
8774 13040 2.095059 AGGCATCAGCGAACAAAACATC 60.095 45.455 0.00 0.00 43.41 3.06
8775 13041 1.888512 AGGCATCAGCGAACAAAACAT 59.111 42.857 0.00 0.00 43.41 2.71
8801 13067 1.590610 AATAAACGCCGCACATGCCA 61.591 50.000 0.00 0.00 37.91 4.92
8896 13163 9.979578 AAGATTGAACAATGCATAAAACTGTTA 57.020 25.926 12.47 1.04 30.62 2.41
8901 13168 7.119605 TGCAAGATTGAACAATGCATAAAAC 57.880 32.000 0.00 0.00 0.00 2.43
8973 13240 7.201741 GCTCCTCCAAAGAACCTATACAAAATC 60.202 40.741 0.00 0.00 0.00 2.17
8987 13254 1.852633 TCTCATCGCTCCTCCAAAGA 58.147 50.000 0.00 0.00 0.00 2.52
8995 13271 2.468831 GAACTGACATCTCATCGCTCC 58.531 52.381 0.00 0.00 0.00 4.70
8996 13272 2.159184 TGGAACTGACATCTCATCGCTC 60.159 50.000 0.00 0.00 0.00 5.03
9002 13278 3.242867 AGGAACTGGAACTGACATCTCA 58.757 45.455 0.00 0.00 37.18 3.27
9032 13308 4.886579 ACAAAATGCAACCTCCAAAGATC 58.113 39.130 0.00 0.00 0.00 2.75
9042 13318 6.657888 CATTTGGTTAAGACAAAATGCAACC 58.342 36.000 8.75 0.00 45.38 3.77
9071 13347 1.079127 AGTCCATGGAAGTTCGGCG 60.079 57.895 18.20 0.00 0.00 6.46
9072 13348 0.036388 TCAGTCCATGGAAGTTCGGC 60.036 55.000 18.20 1.52 0.00 5.54
9138 13429 2.480845 AGTCTTCAACCACTACGCAAC 58.519 47.619 0.00 0.00 0.00 4.17
9170 13468 2.039348 GGTTGAAAGTGGGTAGCAGGTA 59.961 50.000 0.00 0.00 0.00 3.08
9171 13469 1.202891 GGTTGAAAGTGGGTAGCAGGT 60.203 52.381 0.00 0.00 0.00 4.00
9172 13470 1.073923 AGGTTGAAAGTGGGTAGCAGG 59.926 52.381 0.00 0.00 0.00 4.85
9173 13471 2.568623 AGGTTGAAAGTGGGTAGCAG 57.431 50.000 0.00 0.00 0.00 4.24
9174 13472 3.306472 AAAGGTTGAAAGTGGGTAGCA 57.694 42.857 0.00 0.00 0.00 3.49
9175 13473 3.005472 GGAAAAGGTTGAAAGTGGGTAGC 59.995 47.826 0.00 0.00 0.00 3.58
9200 13498 8.370182 GGCTATCCATTTTTAATGGTCATGAAT 58.630 33.333 15.89 6.01 40.06 2.57
9230 13528 5.606348 AACATGGCCAGTTTTCTTGTTAA 57.394 34.783 13.05 0.00 30.50 2.01
9263 13561 3.991051 CAGGGTGGCTGACGACGT 61.991 66.667 0.00 0.00 0.00 4.34
9486 13791 6.012858 TGTCCAGAAGTGTAAAGGGAATATGT 60.013 38.462 0.00 0.00 0.00 2.29
9491 13796 3.971305 TCTGTCCAGAAGTGTAAAGGGAA 59.029 43.478 0.00 0.00 33.91 3.97
9540 13845 6.037172 CCCAAGTTGCCGCTACATATTATATC 59.963 42.308 7.70 0.00 0.00 1.63
9554 13859 2.128729 TTTTTCCCCCAAGTTGCCG 58.871 52.632 0.00 0.00 0.00 5.69
9625 13930 3.146847 GTCGGAAATGAGGTTCCACTTT 58.853 45.455 4.93 0.00 46.45 2.66
9728 14033 0.779997 GGGGGCCTTCCATACATCAT 59.220 55.000 0.84 0.00 37.22 2.45
9729 14034 2.240510 GGGGGCCTTCCATACATCA 58.759 57.895 0.84 0.00 37.22 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.