Multiple sequence alignment - TraesCS7A01G181900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G181900 chr7A 100.000 2650 0 0 1 2650 136347918 136345269 0.000000e+00 4894
1 TraesCS7A01G181900 chr7A 89.552 134 13 1 1754 1886 421785158 421785025 4.540000e-38 169
2 TraesCS7A01G181900 chr7A 92.405 79 6 0 1559 1637 136345949 136345871 2.160000e-21 113
3 TraesCS7A01G181900 chr7A 92.405 79 6 0 1970 2048 136346360 136346282 2.160000e-21 113
4 TraesCS7A01G181900 chr7D 92.735 1170 52 12 946 2087 136587146 136585982 0.000000e+00 1659
5 TraesCS7A01G181900 chr7D 88.594 377 35 4 2280 2650 136585943 136585569 4.020000e-123 451
6 TraesCS7A01G181900 chr7D 90.299 134 12 1 1754 1886 34373470 34373337 9.750000e-40 174
7 TraesCS7A01G181900 chr7D 93.671 79 5 0 1559 1637 136586099 136586021 4.630000e-23 119
8 TraesCS7A01G181900 chr7B 92.114 1154 63 17 946 2080 100027961 100026817 0.000000e+00 1602
9 TraesCS7A01G181900 chr7B 85.867 375 33 9 2280 2636 100026769 100026397 5.350000e-102 381
10 TraesCS7A01G181900 chr7B 84.097 371 37 11 1 358 100029104 100028743 3.270000e-89 339
11 TraesCS7A01G181900 chr7B 87.879 99 10 2 1653 1750 100026785 100026688 5.990000e-22 115
12 TraesCS7A01G181900 chr7B 93.506 77 5 0 1561 1637 100026925 100026849 5.990000e-22 115
13 TraesCS7A01G181900 chr7B 90.789 76 7 0 1970 2045 100027342 100027267 4.670000e-18 102
14 TraesCS7A01G181900 chr3D 92.593 135 9 1 1750 1883 322435448 322435314 2.690000e-45 193
15 TraesCS7A01G181900 chr3D 86.391 169 14 3 2086 2251 3987920 3987758 2.710000e-40 176
16 TraesCS7A01G181900 chr3D 85.632 174 14 5 2082 2252 87926164 87925999 3.510000e-39 172
17 TraesCS7A01G181900 chr3B 92.593 135 9 1 1750 1883 396272035 396271901 2.690000e-45 193
18 TraesCS7A01G181900 chr4D 86.792 159 11 4 2096 2251 465125320 465125471 4.540000e-38 169
19 TraesCS7A01G181900 chr4D 85.294 170 15 5 2086 2252 89423899 89424061 1.630000e-37 167
20 TraesCS7A01G181900 chr5D 88.489 139 14 2 1752 1890 559421231 559421095 1.630000e-37 167
21 TraesCS7A01G181900 chr1D 89.474 133 10 2 1754 1883 314013536 314013667 5.870000e-37 165
22 TraesCS7A01G181900 chr4B 85.119 168 15 5 2087 2251 650273378 650273218 2.110000e-36 163
23 TraesCS7A01G181900 chr5B 84.571 175 14 9 2080 2251 472739836 472739672 7.590000e-36 161
24 TraesCS7A01G181900 chr5B 87.943 141 11 5 1752 1890 693662931 693662795 7.590000e-36 161
25 TraesCS7A01G181900 chr5A 83.799 179 19 5 2076 2251 569179146 569179317 7.590000e-36 161
26 TraesCS7A01G181900 chr1B 84.181 177 16 7 2075 2248 70500436 70500603 7.590000e-36 161
27 TraesCS7A01G181900 chr2D 83.425 181 19 5 2074 2251 571078947 571079119 9.820000e-35 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G181900 chr7A 136345269 136347918 2649 True 1706.666667 4894 94.936667 1 2650 3 chr7A.!!$R2 2649
1 TraesCS7A01G181900 chr7D 136585569 136587146 1577 True 743.000000 1659 91.666667 946 2650 3 chr7D.!!$R2 1704
2 TraesCS7A01G181900 chr7B 100026397 100029104 2707 True 442.333333 1602 89.042000 1 2636 6 chr7B.!!$R1 2635

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
431 1068 0.035247 CGTCCCGACCCCCATTAAAA 60.035 55.0 0.0 0.0 0.0 1.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2236 2933 0.179081 GCACATACTCCCTCCGTTCC 60.179 60.0 0.0 0.0 0.0 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.733344 GAATACGGGCTGCTGCGGA 62.733 63.158 13.72 0.00 40.82 5.54
46 47 1.839894 CACCCCCTATCCCAAGCTC 59.160 63.158 0.00 0.00 0.00 4.09
55 56 4.717629 CCCAAGCTCGCGTCGACA 62.718 66.667 17.16 0.00 0.00 4.35
64 65 1.803922 CGCGTCGACACCATTGCTA 60.804 57.895 17.16 0.00 0.00 3.49
66 67 1.847818 GCGTCGACACCATTGCTATA 58.152 50.000 17.16 0.00 0.00 1.31
72 73 2.772287 GACACCATTGCTATAGCTCCC 58.228 52.381 24.61 0.00 42.66 4.30
73 74 1.421646 ACACCATTGCTATAGCTCCCC 59.578 52.381 24.61 0.00 42.66 4.81
74 75 1.068121 ACCATTGCTATAGCTCCCCC 58.932 55.000 24.61 0.00 42.66 5.40
75 76 1.067295 CCATTGCTATAGCTCCCCCA 58.933 55.000 24.61 0.98 42.66 4.96
76 77 1.637553 CCATTGCTATAGCTCCCCCAT 59.362 52.381 24.61 5.50 42.66 4.00
77 78 2.356535 CCATTGCTATAGCTCCCCCATC 60.357 54.545 24.61 0.00 42.66 3.51
78 79 1.362224 TTGCTATAGCTCCCCCATCC 58.638 55.000 24.61 0.00 42.66 3.51
88 89 2.122144 CCCCATCCCCCATCCGTA 60.122 66.667 0.00 0.00 0.00 4.02
103 104 2.202623 GTAGCACCCGAGACGCTG 60.203 66.667 0.00 0.00 37.20 5.18
120 121 4.803426 GTCAGAGGAGGCGCCGTG 62.803 72.222 23.20 14.58 43.43 4.94
164 175 3.455469 GCCTGGGTCATGCCTTGC 61.455 66.667 0.00 3.75 37.43 4.01
167 178 4.349503 TGGGTCATGCCTTGCGCT 62.350 61.111 9.73 0.00 38.78 5.92
168 179 3.512516 GGGTCATGCCTTGCGCTC 61.513 66.667 9.73 0.00 38.78 5.03
169 180 2.437359 GGTCATGCCTTGCGCTCT 60.437 61.111 9.73 0.00 38.78 4.09
205 216 2.421314 CTGCACGACCCAGACACA 59.579 61.111 0.00 0.00 32.03 3.72
223 234 1.623811 ACACGCCATGTCTAAGACCTT 59.376 47.619 0.00 0.00 36.54 3.50
225 236 1.623811 ACGCCATGTCTAAGACCTTGT 59.376 47.619 0.00 0.00 0.00 3.16
226 237 2.271800 CGCCATGTCTAAGACCTTGTC 58.728 52.381 0.00 0.00 0.00 3.18
239 250 1.671054 CTTGTCGGGGAACGTGCAT 60.671 57.895 0.00 0.00 44.69 3.96
241 252 3.124921 GTCGGGGAACGTGCATGG 61.125 66.667 11.36 0.00 44.69 3.66
259 270 0.686224 GGAGCATCTCTAGCTGCCAT 59.314 55.000 0.00 0.00 43.61 4.40
261 272 0.250381 AGCATCTCTAGCTGCCATGC 60.250 55.000 11.71 11.71 41.61 4.06
296 307 2.352032 GGGCCGCAGACTACACTCT 61.352 63.158 0.00 0.00 0.00 3.24
298 309 0.737715 GGCCGCAGACTACACTCTTG 60.738 60.000 0.00 0.00 0.00 3.02
306 317 0.473886 ACTACACTCTTGGCACCCCT 60.474 55.000 0.00 0.00 0.00 4.79
308 319 0.766674 TACACTCTTGGCACCCCTGT 60.767 55.000 0.00 0.00 0.00 4.00
323 336 0.327924 CCTGTATGGGTGGTGCTTGA 59.672 55.000 0.00 0.00 0.00 3.02
328 341 4.667573 TGTATGGGTGGTGCTTGATTTTA 58.332 39.130 0.00 0.00 0.00 1.52
332 345 6.655078 ATGGGTGGTGCTTGATTTTATATC 57.345 37.500 0.00 0.00 0.00 1.63
334 347 4.023193 GGGTGGTGCTTGATTTTATATCGG 60.023 45.833 0.00 0.00 0.00 4.18
353 366 3.746900 GCATTGCCAATGGGAAGTC 57.253 52.632 18.52 2.35 36.27 3.01
366 1003 2.526873 AAGTCGGCTGGTGGGAGT 60.527 61.111 0.00 0.00 0.00 3.85
378 1015 3.857038 GGGAGTGGCGGCCGATAA 61.857 66.667 33.48 10.54 0.00 1.75
380 1017 2.792947 GGAGTGGCGGCCGATAAGA 61.793 63.158 33.48 3.19 0.00 2.10
381 1018 1.591863 GAGTGGCGGCCGATAAGAC 60.592 63.158 33.48 16.38 0.00 3.01
382 1019 2.588034 GTGGCGGCCGATAAGACC 60.588 66.667 33.48 20.27 0.00 3.85
383 1020 2.762459 TGGCGGCCGATAAGACCT 60.762 61.111 33.48 0.00 0.00 3.85
385 1022 1.289380 GGCGGCCGATAAGACCTAG 59.711 63.158 33.48 0.00 0.00 3.02
386 1023 1.373121 GCGGCCGATAAGACCTAGC 60.373 63.158 33.48 1.25 0.00 3.42
387 1024 1.289380 CGGCCGATAAGACCTAGCC 59.711 63.158 24.07 0.00 37.03 3.93
388 1025 1.461091 CGGCCGATAAGACCTAGCCA 61.461 60.000 24.07 0.00 40.49 4.75
389 1026 0.756903 GGCCGATAAGACCTAGCCAA 59.243 55.000 0.00 0.00 40.20 4.52
390 1027 1.140252 GGCCGATAAGACCTAGCCAAA 59.860 52.381 0.00 0.00 40.20 3.28
391 1028 2.224548 GGCCGATAAGACCTAGCCAAAT 60.225 50.000 0.00 0.00 40.20 2.32
392 1029 2.808543 GCCGATAAGACCTAGCCAAATG 59.191 50.000 0.00 0.00 0.00 2.32
393 1030 3.403038 CCGATAAGACCTAGCCAAATGG 58.597 50.000 0.00 0.00 38.53 3.16
394 1031 3.403038 CGATAAGACCTAGCCAAATGGG 58.597 50.000 0.90 0.00 40.85 4.00
397 1034 3.080647 GACCTAGCCAAATGGGTCG 57.919 57.895 7.54 1.60 46.04 4.79
398 1035 4.559502 CCTAGCCAAATGGGTCGG 57.440 61.111 7.54 7.62 46.04 4.79
399 1036 1.152963 CCTAGCCAAATGGGTCGGG 60.153 63.158 12.98 10.59 46.04 5.14
400 1037 1.632018 CCTAGCCAAATGGGTCGGGA 61.632 60.000 12.98 0.00 46.04 5.14
401 1038 0.463833 CTAGCCAAATGGGTCGGGAC 60.464 60.000 7.54 0.00 46.04 4.46
402 1039 0.912487 TAGCCAAATGGGTCGGGACT 60.912 55.000 7.54 0.00 46.04 3.85
403 1040 2.046285 GCCAAATGGGTCGGGACTG 61.046 63.158 0.90 0.00 39.65 3.51
404 1041 2.046285 CCAAATGGGTCGGGACTGC 61.046 63.158 0.00 0.00 0.00 4.40
405 1042 2.046285 CAAATGGGTCGGGACTGCC 61.046 63.158 0.00 0.00 0.00 4.85
406 1043 2.231380 AAATGGGTCGGGACTGCCT 61.231 57.895 0.00 0.00 0.00 4.75
407 1044 2.484287 AAATGGGTCGGGACTGCCTG 62.484 60.000 0.00 0.00 42.30 4.85
415 1052 4.083862 GGACTGCCTGACCCCGTC 62.084 72.222 0.00 0.00 0.00 4.79
416 1053 4.083862 GACTGCCTGACCCCGTCC 62.084 72.222 0.00 0.00 0.00 4.79
428 1065 2.764967 CCGTCCCGACCCCCATTA 60.765 66.667 0.00 0.00 0.00 1.90
429 1066 2.368821 CCGTCCCGACCCCCATTAA 61.369 63.158 0.00 0.00 0.00 1.40
430 1067 1.603306 CGTCCCGACCCCCATTAAA 59.397 57.895 0.00 0.00 0.00 1.52
431 1068 0.035247 CGTCCCGACCCCCATTAAAA 60.035 55.000 0.00 0.00 0.00 1.52
432 1069 1.466856 GTCCCGACCCCCATTAAAAC 58.533 55.000 0.00 0.00 0.00 2.43
433 1070 1.073931 TCCCGACCCCCATTAAAACA 58.926 50.000 0.00 0.00 0.00 2.83
434 1071 1.641714 TCCCGACCCCCATTAAAACAT 59.358 47.619 0.00 0.00 0.00 2.71
435 1072 1.754226 CCCGACCCCCATTAAAACATG 59.246 52.381 0.00 0.00 0.00 3.21
436 1073 1.136110 CCGACCCCCATTAAAACATGC 59.864 52.381 0.00 0.00 0.00 4.06
437 1074 1.136110 CGACCCCCATTAAAACATGCC 59.864 52.381 0.00 0.00 0.00 4.40
438 1075 2.466846 GACCCCCATTAAAACATGCCT 58.533 47.619 0.00 0.00 0.00 4.75
439 1076 2.168313 GACCCCCATTAAAACATGCCTG 59.832 50.000 0.00 0.00 0.00 4.85
440 1077 1.485895 CCCCCATTAAAACATGCCTGG 59.514 52.381 0.00 0.00 0.00 4.45
441 1078 1.134431 CCCCATTAAAACATGCCTGGC 60.134 52.381 12.87 12.87 0.00 4.85
442 1079 1.554160 CCCATTAAAACATGCCTGGCA 59.446 47.619 25.65 25.65 44.86 4.92
443 1080 2.620242 CCATTAAAACATGCCTGGCAC 58.380 47.619 25.99 0.00 43.04 5.01
444 1081 2.261345 CATTAAAACATGCCTGGCACG 58.739 47.619 25.99 19.91 43.04 5.34
445 1082 1.610363 TTAAAACATGCCTGGCACGA 58.390 45.000 25.99 0.37 43.04 4.35
446 1083 0.878416 TAAAACATGCCTGGCACGAC 59.122 50.000 25.99 0.00 43.04 4.34
447 1084 1.106351 AAAACATGCCTGGCACGACA 61.106 50.000 25.99 0.00 43.04 4.35
448 1085 1.795170 AAACATGCCTGGCACGACAC 61.795 55.000 25.99 0.00 43.04 3.67
449 1086 2.669229 CATGCCTGGCACGACACA 60.669 61.111 25.99 0.00 43.04 3.72
450 1087 2.359107 ATGCCTGGCACGACACAG 60.359 61.111 25.99 0.00 43.04 3.66
456 1093 3.434319 GGCACGACACAGCCCATG 61.434 66.667 0.00 0.00 45.18 3.66
457 1094 3.434319 GCACGACACAGCCCATGG 61.434 66.667 4.14 4.14 0.00 3.66
467 1104 4.559502 GCCCATGGCGACTTGTAT 57.440 55.556 6.09 0.00 39.62 2.29
468 1105 3.698250 GCCCATGGCGACTTGTATA 57.302 52.632 6.09 0.00 39.62 1.47
469 1106 2.185004 GCCCATGGCGACTTGTATAT 57.815 50.000 6.09 0.00 39.62 0.86
470 1107 3.328382 GCCCATGGCGACTTGTATATA 57.672 47.619 6.09 0.00 39.62 0.86
471 1108 3.670625 GCCCATGGCGACTTGTATATAA 58.329 45.455 6.09 0.00 39.62 0.98
472 1109 4.069304 GCCCATGGCGACTTGTATATAAA 58.931 43.478 6.09 0.00 39.62 1.40
473 1110 4.700213 GCCCATGGCGACTTGTATATAAAT 59.300 41.667 6.09 0.00 39.62 1.40
474 1111 5.391950 GCCCATGGCGACTTGTATATAAATG 60.392 44.000 6.09 0.00 39.62 2.32
475 1112 5.705441 CCCATGGCGACTTGTATATAAATGT 59.295 40.000 6.09 0.00 33.84 2.71
476 1113 6.348458 CCCATGGCGACTTGTATATAAATGTG 60.348 42.308 6.09 0.00 33.84 3.21
477 1114 6.204688 CCATGGCGACTTGTATATAAATGTGT 59.795 38.462 0.00 0.00 33.84 3.72
478 1115 6.838198 TGGCGACTTGTATATAAATGTGTC 57.162 37.500 0.00 0.00 0.00 3.67
479 1116 6.578944 TGGCGACTTGTATATAAATGTGTCT 58.421 36.000 0.00 0.00 0.00 3.41
480 1117 7.045416 TGGCGACTTGTATATAAATGTGTCTT 58.955 34.615 0.00 0.00 0.00 3.01
481 1118 7.011016 TGGCGACTTGTATATAAATGTGTCTTG 59.989 37.037 0.00 0.00 0.00 3.02
482 1119 6.846283 GCGACTTGTATATAAATGTGTCTTGC 59.154 38.462 0.00 0.00 0.00 4.01
483 1120 7.345192 CGACTTGTATATAAATGTGTCTTGCC 58.655 38.462 0.00 0.00 0.00 4.52
484 1121 7.246674 ACTTGTATATAAATGTGTCTTGCCG 57.753 36.000 0.00 0.00 0.00 5.69
485 1122 6.821665 ACTTGTATATAAATGTGTCTTGCCGT 59.178 34.615 0.00 0.00 0.00 5.68
486 1123 6.597262 TGTATATAAATGTGTCTTGCCGTG 57.403 37.500 0.00 0.00 0.00 4.94
487 1124 6.110033 TGTATATAAATGTGTCTTGCCGTGT 58.890 36.000 0.00 0.00 0.00 4.49
488 1125 5.734855 ATATAAATGTGTCTTGCCGTGTC 57.265 39.130 0.00 0.00 0.00 3.67
489 1126 0.586319 AAATGTGTCTTGCCGTGTCG 59.414 50.000 0.00 0.00 0.00 4.35
490 1127 0.249699 AATGTGTCTTGCCGTGTCGA 60.250 50.000 0.00 0.00 0.00 4.20
491 1128 0.944311 ATGTGTCTTGCCGTGTCGAC 60.944 55.000 9.11 9.11 0.00 4.20
492 1129 1.299926 GTGTCTTGCCGTGTCGACT 60.300 57.895 17.92 0.00 0.00 4.18
493 1130 1.007734 TGTCTTGCCGTGTCGACTC 60.008 57.895 17.92 12.56 0.00 3.36
494 1131 2.081212 GTCTTGCCGTGTCGACTCG 61.081 63.158 27.96 27.96 0.00 4.18
495 1132 3.470567 CTTGCCGTGTCGACTCGC 61.471 66.667 29.12 23.98 0.00 5.03
496 1133 3.898627 CTTGCCGTGTCGACTCGCT 62.899 63.158 29.12 0.00 0.00 4.93
497 1134 4.700365 TGCCGTGTCGACTCGCTG 62.700 66.667 29.12 19.51 0.00 5.18
506 1143 3.044305 GACTCGCTGCCGCACTTT 61.044 61.111 0.00 0.00 35.30 2.66
507 1144 3.016474 GACTCGCTGCCGCACTTTC 62.016 63.158 0.00 0.00 35.30 2.62
508 1145 3.043713 CTCGCTGCCGCACTTTCA 61.044 61.111 0.00 0.00 35.30 2.69
509 1146 2.358615 TCGCTGCCGCACTTTCAT 60.359 55.556 0.00 0.00 35.30 2.57
510 1147 2.202388 CGCTGCCGCACTTTCATG 60.202 61.111 0.00 0.00 35.30 3.07
511 1148 2.505557 GCTGCCGCACTTTCATGC 60.506 61.111 0.00 0.00 42.48 4.06
512 1149 2.180017 CTGCCGCACTTTCATGCC 59.820 61.111 0.00 0.00 42.99 4.40
513 1150 3.346631 CTGCCGCACTTTCATGCCC 62.347 63.158 0.00 0.00 42.99 5.36
514 1151 3.372730 GCCGCACTTTCATGCCCA 61.373 61.111 0.00 0.00 42.99 5.36
515 1152 2.879907 CCGCACTTTCATGCCCAG 59.120 61.111 0.00 0.00 42.99 4.45
516 1153 2.703798 CCGCACTTTCATGCCCAGG 61.704 63.158 0.00 0.00 42.99 4.45
517 1154 2.575461 GCACTTTCATGCCCAGGC 59.425 61.111 0.38 0.38 39.86 4.85
528 1165 4.728102 CCCAGGCACGACGCGTTA 62.728 66.667 15.53 0.00 43.84 3.18
529 1166 3.179265 CCAGGCACGACGCGTTAG 61.179 66.667 15.53 13.98 43.84 2.34
530 1167 2.430244 CAGGCACGACGCGTTAGT 60.430 61.111 15.53 14.72 43.84 2.24
531 1168 2.019951 CAGGCACGACGCGTTAGTT 61.020 57.895 15.53 0.00 43.84 2.24
532 1169 0.730155 CAGGCACGACGCGTTAGTTA 60.730 55.000 15.53 0.00 43.84 2.24
533 1170 0.039256 AGGCACGACGCGTTAGTTAA 60.039 50.000 15.53 0.00 43.84 2.01
534 1171 0.783579 GGCACGACGCGTTAGTTAAA 59.216 50.000 15.53 0.00 43.84 1.52
535 1172 1.391144 GGCACGACGCGTTAGTTAAAT 59.609 47.619 15.53 0.00 43.84 1.40
536 1173 2.414985 GCACGACGCGTTAGTTAAATG 58.585 47.619 15.53 6.06 38.32 2.32
537 1174 2.159934 GCACGACGCGTTAGTTAAATGT 60.160 45.455 15.53 0.00 38.32 2.71
538 1175 3.392141 CACGACGCGTTAGTTAAATGTG 58.608 45.455 15.53 7.57 38.32 3.21
541 1178 3.693300 ACGCGTTAGTTAAATGTGTCG 57.307 42.857 5.58 0.00 42.81 4.35
542 1179 2.409378 ACGCGTTAGTTAAATGTGTCGG 59.591 45.455 5.58 0.00 42.81 4.79
543 1180 2.765918 GCGTTAGTTAAATGTGTCGGC 58.234 47.619 0.00 0.00 0.00 5.54
544 1181 2.414138 GCGTTAGTTAAATGTGTCGGCT 59.586 45.455 0.00 0.00 0.00 5.52
545 1182 3.483085 GCGTTAGTTAAATGTGTCGGCTC 60.483 47.826 0.00 0.00 0.00 4.70
546 1183 3.241552 CGTTAGTTAAATGTGTCGGCTCG 60.242 47.826 0.00 0.00 0.00 5.03
547 1184 2.450609 AGTTAAATGTGTCGGCTCGT 57.549 45.000 0.00 0.00 0.00 4.18
550 1187 1.705256 TAAATGTGTCGGCTCGTGAC 58.295 50.000 0.00 0.00 36.88 3.67
559 1196 1.189403 CGGCTCGTGACTCGTTTATC 58.811 55.000 0.00 0.00 40.80 1.75
560 1197 1.189403 GGCTCGTGACTCGTTTATCG 58.811 55.000 0.00 0.00 40.80 2.92
561 1198 0.566593 GCTCGTGACTCGTTTATCGC 59.433 55.000 0.00 0.00 40.80 4.58
562 1199 1.794437 GCTCGTGACTCGTTTATCGCT 60.794 52.381 0.00 0.00 40.80 4.93
563 1200 2.516923 CTCGTGACTCGTTTATCGCTT 58.483 47.619 0.00 0.00 40.80 4.68
564 1201 2.247637 TCGTGACTCGTTTATCGCTTG 58.752 47.619 0.00 0.00 40.80 4.01
565 1202 1.983605 CGTGACTCGTTTATCGCTTGT 59.016 47.619 0.00 0.00 39.67 3.16
566 1203 2.222289 CGTGACTCGTTTATCGCTTGTG 60.222 50.000 0.00 0.00 39.67 3.33
567 1204 2.984471 GTGACTCGTTTATCGCTTGTGA 59.016 45.455 0.00 0.00 39.67 3.58
568 1205 3.059570 GTGACTCGTTTATCGCTTGTGAG 59.940 47.826 0.00 0.00 39.67 3.51
569 1206 1.993370 ACTCGTTTATCGCTTGTGAGC 59.007 47.619 0.00 0.00 45.65 4.26
585 1222 4.319249 GCAACGTGCTTTTGGGTC 57.681 55.556 0.00 0.00 40.96 4.46
586 1223 1.435515 GCAACGTGCTTTTGGGTCA 59.564 52.632 0.00 0.00 40.96 4.02
588 1225 1.537990 GCAACGTGCTTTTGGGTCAAT 60.538 47.619 0.00 0.00 40.96 2.57
589 1226 2.820330 CAACGTGCTTTTGGGTCAATT 58.180 42.857 0.00 0.00 0.00 2.32
590 1227 3.194062 CAACGTGCTTTTGGGTCAATTT 58.806 40.909 0.00 0.00 0.00 1.82
591 1228 2.820330 ACGTGCTTTTGGGTCAATTTG 58.180 42.857 0.00 0.00 0.00 2.32
592 1229 2.134346 CGTGCTTTTGGGTCAATTTGG 58.866 47.619 0.00 0.00 0.00 3.28
594 1231 1.202746 TGCTTTTGGGTCAATTTGGGC 60.203 47.619 0.00 0.00 0.00 5.36
596 1233 2.769893 CTTTTGGGTCAATTTGGGCTG 58.230 47.619 0.00 0.00 0.00 4.85
597 1234 1.799933 TTTGGGTCAATTTGGGCTGT 58.200 45.000 0.00 0.00 0.00 4.40
598 1235 1.799933 TTGGGTCAATTTGGGCTGTT 58.200 45.000 0.00 0.00 0.00 3.16
599 1236 1.799933 TGGGTCAATTTGGGCTGTTT 58.200 45.000 0.00 0.00 0.00 2.83
600 1237 2.122768 TGGGTCAATTTGGGCTGTTTT 58.877 42.857 0.00 0.00 0.00 2.43
601 1238 2.158842 TGGGTCAATTTGGGCTGTTTTG 60.159 45.455 0.00 0.00 0.00 2.44
602 1239 2.103941 GGGTCAATTTGGGCTGTTTTGA 59.896 45.455 0.00 0.00 0.00 2.69
603 1240 3.392882 GGTCAATTTGGGCTGTTTTGAG 58.607 45.455 0.00 0.00 0.00 3.02
604 1241 3.392882 GTCAATTTGGGCTGTTTTGAGG 58.607 45.455 0.00 0.00 0.00 3.86
605 1242 2.368221 TCAATTTGGGCTGTTTTGAGGG 59.632 45.455 0.00 0.00 0.00 4.30
606 1243 2.101640 ATTTGGGCTGTTTTGAGGGT 57.898 45.000 0.00 0.00 0.00 4.34
607 1244 1.872773 TTTGGGCTGTTTTGAGGGTT 58.127 45.000 0.00 0.00 0.00 4.11
608 1245 1.872773 TTGGGCTGTTTTGAGGGTTT 58.127 45.000 0.00 0.00 0.00 3.27
609 1246 1.408969 TGGGCTGTTTTGAGGGTTTC 58.591 50.000 0.00 0.00 0.00 2.78
610 1247 1.063266 TGGGCTGTTTTGAGGGTTTCT 60.063 47.619 0.00 0.00 0.00 2.52
611 1248 2.175931 TGGGCTGTTTTGAGGGTTTCTA 59.824 45.455 0.00 0.00 0.00 2.10
612 1249 3.181423 TGGGCTGTTTTGAGGGTTTCTAT 60.181 43.478 0.00 0.00 0.00 1.98
613 1250 4.043561 TGGGCTGTTTTGAGGGTTTCTATA 59.956 41.667 0.00 0.00 0.00 1.31
614 1251 4.398358 GGGCTGTTTTGAGGGTTTCTATAC 59.602 45.833 0.00 0.00 0.00 1.47
615 1252 5.254115 GGCTGTTTTGAGGGTTTCTATACT 58.746 41.667 0.00 0.00 0.00 2.12
616 1253 5.123979 GGCTGTTTTGAGGGTTTCTATACTG 59.876 44.000 0.00 0.00 0.00 2.74
617 1254 5.705905 GCTGTTTTGAGGGTTTCTATACTGT 59.294 40.000 0.00 0.00 0.00 3.55
618 1255 6.206829 GCTGTTTTGAGGGTTTCTATACTGTT 59.793 38.462 0.00 0.00 0.00 3.16
619 1256 7.255486 GCTGTTTTGAGGGTTTCTATACTGTTT 60.255 37.037 0.00 0.00 0.00 2.83
620 1257 8.528044 TGTTTTGAGGGTTTCTATACTGTTTT 57.472 30.769 0.00 0.00 0.00 2.43
621 1258 8.973182 TGTTTTGAGGGTTTCTATACTGTTTTT 58.027 29.630 0.00 0.00 0.00 1.94
622 1259 9.244799 GTTTTGAGGGTTTCTATACTGTTTTTG 57.755 33.333 0.00 0.00 0.00 2.44
623 1260 7.519032 TTGAGGGTTTCTATACTGTTTTTGG 57.481 36.000 0.00 0.00 0.00 3.28
624 1261 6.007703 TGAGGGTTTCTATACTGTTTTTGGG 58.992 40.000 0.00 0.00 0.00 4.12
625 1262 5.330233 AGGGTTTCTATACTGTTTTTGGGG 58.670 41.667 0.00 0.00 0.00 4.96
626 1263 4.081862 GGGTTTCTATACTGTTTTTGGGGC 60.082 45.833 0.00 0.00 0.00 5.80
627 1264 4.081862 GGTTTCTATACTGTTTTTGGGGCC 60.082 45.833 0.00 0.00 0.00 5.80
628 1265 4.668138 TTCTATACTGTTTTTGGGGCCT 57.332 40.909 0.84 0.00 0.00 5.19
629 1266 5.782677 TTCTATACTGTTTTTGGGGCCTA 57.217 39.130 0.84 0.00 0.00 3.93
630 1267 5.987019 TCTATACTGTTTTTGGGGCCTAT 57.013 39.130 0.84 0.00 0.00 2.57
631 1268 6.335781 TCTATACTGTTTTTGGGGCCTATT 57.664 37.500 0.84 0.00 0.00 1.73
632 1269 6.737608 TCTATACTGTTTTTGGGGCCTATTT 58.262 36.000 0.84 0.00 0.00 1.40
633 1270 5.675684 ATACTGTTTTTGGGGCCTATTTG 57.324 39.130 0.84 0.00 0.00 2.32
634 1271 3.313791 ACTGTTTTTGGGGCCTATTTGT 58.686 40.909 0.84 0.00 0.00 2.83
635 1272 3.323691 ACTGTTTTTGGGGCCTATTTGTC 59.676 43.478 0.84 0.00 0.00 3.18
636 1273 3.309296 TGTTTTTGGGGCCTATTTGTCA 58.691 40.909 0.84 0.00 0.00 3.58
637 1274 3.711704 TGTTTTTGGGGCCTATTTGTCAA 59.288 39.130 0.84 0.00 0.00 3.18
638 1275 4.164221 TGTTTTTGGGGCCTATTTGTCAAA 59.836 37.500 0.84 0.00 0.00 2.69
639 1276 5.126779 GTTTTTGGGGCCTATTTGTCAAAA 58.873 37.500 0.84 6.99 33.91 2.44
640 1277 5.373812 TTTTGGGGCCTATTTGTCAAAAA 57.626 34.783 0.84 0.00 33.16 1.94
641 1278 5.574970 TTTGGGGCCTATTTGTCAAAAAT 57.425 34.783 0.84 0.00 0.00 1.82
642 1279 6.688073 TTTGGGGCCTATTTGTCAAAAATA 57.312 33.333 0.84 0.00 0.00 1.40
643 1280 6.688073 TTGGGGCCTATTTGTCAAAAATAA 57.312 33.333 0.84 0.00 0.00 1.40
644 1281 6.882768 TGGGGCCTATTTGTCAAAAATAAT 57.117 33.333 0.84 0.00 0.00 1.28
645 1282 7.264294 TGGGGCCTATTTGTCAAAAATAATT 57.736 32.000 0.84 0.00 0.00 1.40
646 1283 7.334858 TGGGGCCTATTTGTCAAAAATAATTC 58.665 34.615 0.84 0.00 0.00 2.17
647 1284 7.181845 TGGGGCCTATTTGTCAAAAATAATTCT 59.818 33.333 0.84 0.00 0.00 2.40
648 1285 8.700973 GGGGCCTATTTGTCAAAAATAATTCTA 58.299 33.333 0.84 0.00 0.00 2.10
727 1364 2.125512 CCGTGTCTGGCACCTAGC 60.126 66.667 6.84 0.00 44.97 3.42
728 1365 2.650116 CCGTGTCTGGCACCTAGCT 61.650 63.158 6.84 0.00 44.97 3.32
729 1366 1.293498 CGTGTCTGGCACCTAGCTT 59.707 57.895 6.84 0.00 44.97 3.74
730 1367 0.737715 CGTGTCTGGCACCTAGCTTC 60.738 60.000 6.84 0.00 44.97 3.86
731 1368 0.737715 GTGTCTGGCACCTAGCTTCG 60.738 60.000 0.00 0.00 44.79 3.79
732 1369 1.185618 TGTCTGGCACCTAGCTTCGT 61.186 55.000 0.00 0.00 44.79 3.85
733 1370 0.737715 GTCTGGCACCTAGCTTCGTG 60.738 60.000 8.18 8.18 44.79 4.35
734 1371 1.448540 CTGGCACCTAGCTTCGTGG 60.449 63.158 13.07 4.55 44.79 4.94
735 1372 2.820037 GGCACCTAGCTTCGTGGC 60.820 66.667 19.18 19.18 46.47 5.01
736 1373 2.820037 GCACCTAGCTTCGTGGCC 60.820 66.667 13.07 0.00 41.15 5.36
737 1374 2.125106 CACCTAGCTTCGTGGCCC 60.125 66.667 0.00 0.00 0.00 5.80
738 1375 2.606519 ACCTAGCTTCGTGGCCCA 60.607 61.111 0.00 0.00 0.00 5.36
739 1376 2.187946 CCTAGCTTCGTGGCCCAG 59.812 66.667 0.00 0.00 0.00 4.45
740 1377 2.187946 CTAGCTTCGTGGCCCAGG 59.812 66.667 0.00 0.00 0.00 4.45
741 1378 4.096003 TAGCTTCGTGGCCCAGGC 62.096 66.667 0.00 0.00 41.06 4.85
770 1407 3.409856 CGAGCACGGCCCATTTAG 58.590 61.111 0.00 0.00 35.72 1.85
771 1408 2.823829 CGAGCACGGCCCATTTAGC 61.824 63.158 0.00 0.00 35.72 3.09
779 1416 1.517361 GCCCATTTAGCCAAGTGCC 59.483 57.895 0.00 0.00 42.71 5.01
780 1417 1.257055 GCCCATTTAGCCAAGTGCCA 61.257 55.000 0.00 0.00 42.71 4.92
781 1418 1.488390 CCCATTTAGCCAAGTGCCAT 58.512 50.000 0.00 0.00 42.71 4.40
782 1419 1.832998 CCCATTTAGCCAAGTGCCATT 59.167 47.619 0.00 0.00 42.71 3.16
783 1420 2.236893 CCCATTTAGCCAAGTGCCATTT 59.763 45.455 0.00 0.00 42.71 2.32
784 1421 3.307621 CCCATTTAGCCAAGTGCCATTTT 60.308 43.478 0.00 0.00 42.71 1.82
785 1422 4.081198 CCCATTTAGCCAAGTGCCATTTTA 60.081 41.667 0.00 0.00 42.71 1.52
786 1423 5.111293 CCATTTAGCCAAGTGCCATTTTAG 58.889 41.667 0.00 0.00 42.71 1.85
787 1424 4.799564 TTTAGCCAAGTGCCATTTTAGG 57.200 40.909 0.00 0.00 42.71 2.69
798 1435 3.806625 CCATTTTAGGCCCATGAAGTG 57.193 47.619 0.00 0.00 0.00 3.16
799 1436 3.099141 CCATTTTAGGCCCATGAAGTGT 58.901 45.455 0.00 0.00 0.00 3.55
800 1437 3.131046 CCATTTTAGGCCCATGAAGTGTC 59.869 47.826 0.00 0.00 0.00 3.67
801 1438 2.107950 TTTAGGCCCATGAAGTGTCG 57.892 50.000 0.00 0.00 0.00 4.35
802 1439 0.251916 TTAGGCCCATGAAGTGTCGG 59.748 55.000 0.00 0.00 0.00 4.79
803 1440 1.622607 TAGGCCCATGAAGTGTCGGG 61.623 60.000 0.00 0.00 42.03 5.14
805 1442 2.350895 CCCATGAAGTGTCGGGCA 59.649 61.111 0.00 0.00 0.00 5.36
846 1483 4.039092 CCCAGGTGGCCAGGTCTG 62.039 72.222 5.11 14.56 0.00 3.51
847 1484 3.252284 CCAGGTGGCCAGGTCTGT 61.252 66.667 21.87 0.00 0.00 3.41
848 1485 2.033141 CAGGTGGCCAGGTCTGTG 59.967 66.667 5.11 0.00 0.00 3.66
849 1486 3.252284 AGGTGGCCAGGTCTGTGG 61.252 66.667 5.11 0.00 41.01 4.17
855 1492 2.124983 CCAGGTCTGTGGCCGATG 60.125 66.667 0.00 0.00 0.00 3.84
856 1493 2.821366 CAGGTCTGTGGCCGATGC 60.821 66.667 0.00 0.00 0.00 3.91
857 1494 3.321648 AGGTCTGTGGCCGATGCA 61.322 61.111 0.00 0.00 40.13 3.96
858 1495 2.821366 GGTCTGTGGCCGATGCAG 60.821 66.667 0.00 4.11 40.13 4.41
859 1496 2.821366 GTCTGTGGCCGATGCAGG 60.821 66.667 13.85 0.00 40.13 4.85
860 1497 4.100084 TCTGTGGCCGATGCAGGG 62.100 66.667 13.85 2.25 40.13 4.45
900 1537 2.180276 GTGGAGATGTAGGTGAGGTGT 58.820 52.381 0.00 0.00 0.00 4.16
901 1538 2.567615 GTGGAGATGTAGGTGAGGTGTT 59.432 50.000 0.00 0.00 0.00 3.32
902 1539 3.008049 GTGGAGATGTAGGTGAGGTGTTT 59.992 47.826 0.00 0.00 0.00 2.83
903 1540 3.007940 TGGAGATGTAGGTGAGGTGTTTG 59.992 47.826 0.00 0.00 0.00 2.93
904 1541 3.600388 GAGATGTAGGTGAGGTGTTTGG 58.400 50.000 0.00 0.00 0.00 3.28
905 1542 3.248024 AGATGTAGGTGAGGTGTTTGGA 58.752 45.455 0.00 0.00 0.00 3.53
906 1543 3.261897 AGATGTAGGTGAGGTGTTTGGAG 59.738 47.826 0.00 0.00 0.00 3.86
907 1544 1.697432 TGTAGGTGAGGTGTTTGGAGG 59.303 52.381 0.00 0.00 0.00 4.30
908 1545 1.975680 GTAGGTGAGGTGTTTGGAGGA 59.024 52.381 0.00 0.00 0.00 3.71
909 1546 1.059913 AGGTGAGGTGTTTGGAGGAG 58.940 55.000 0.00 0.00 0.00 3.69
910 1547 0.765510 GGTGAGGTGTTTGGAGGAGT 59.234 55.000 0.00 0.00 0.00 3.85
911 1548 1.143073 GGTGAGGTGTTTGGAGGAGTT 59.857 52.381 0.00 0.00 0.00 3.01
912 1549 2.222027 GTGAGGTGTTTGGAGGAGTTG 58.778 52.381 0.00 0.00 0.00 3.16
913 1550 1.142870 TGAGGTGTTTGGAGGAGTTGG 59.857 52.381 0.00 0.00 0.00 3.77
931 1568 3.593442 TGGGGTCAAAAATCAGTGAGT 57.407 42.857 0.00 0.00 0.00 3.41
941 1578 4.916041 AAATCAGTGAGTGGATCCTTGA 57.084 40.909 14.23 7.56 0.00 3.02
942 1579 4.484537 AATCAGTGAGTGGATCCTTGAG 57.515 45.455 14.23 0.00 0.00 3.02
943 1580 1.552337 TCAGTGAGTGGATCCTTGAGC 59.448 52.381 14.23 0.75 0.00 4.26
944 1581 0.908198 AGTGAGTGGATCCTTGAGCC 59.092 55.000 14.23 0.00 38.78 4.70
1287 1957 5.330233 CCATTGAAACCCTAACCCTAAGTT 58.670 41.667 0.00 0.00 42.83 2.66
1288 1958 5.185056 CCATTGAAACCCTAACCCTAAGTTG 59.815 44.000 0.00 0.00 39.67 3.16
1289 1959 5.649970 TTGAAACCCTAACCCTAAGTTGA 57.350 39.130 0.00 0.00 39.67 3.18
1290 1960 5.649970 TGAAACCCTAACCCTAAGTTGAA 57.350 39.130 0.00 0.00 39.67 2.69
1291 1961 5.627135 TGAAACCCTAACCCTAAGTTGAAG 58.373 41.667 0.00 0.00 39.67 3.02
1405 2087 2.128507 AAGCTCGAGATCCCCGACC 61.129 63.158 18.75 0.00 32.18 4.79
1422 2104 1.280421 GACCTGGAGGCTGACAAGATT 59.720 52.381 0.00 0.00 39.32 2.40
1539 2221 4.359706 CTTTTCTTGTTTCTGTTTCGGGG 58.640 43.478 0.00 0.00 0.00 5.73
1589 2271 1.062488 AAACTGGTCCCTGGTGCTCT 61.062 55.000 0.00 0.00 0.00 4.09
1598 2280 1.592400 CCTGGTGCTCTGCATTGTGG 61.592 60.000 0.00 0.00 41.91 4.17
1607 2289 4.465512 GCATTGTGGCGGTCGCTG 62.466 66.667 15.04 6.27 41.60 5.18
1611 2293 3.741830 TTGTGGCGGTCGCTGTTGA 62.742 57.895 15.04 0.00 41.60 3.18
1641 2323 4.384940 TGCAACTGTAACATTCTGCAGTA 58.615 39.130 14.67 4.08 40.79 2.74
1644 2326 5.122239 GCAACTGTAACATTCTGCAGTATCA 59.878 40.000 14.67 3.09 40.79 2.15
1846 2532 9.730420 GAGTGAATAAACACACTAAAACATGTT 57.270 29.630 4.92 4.92 42.45 2.71
1883 2571 9.746711 CGATTCAGTAAAAGTTAGAACATCTTG 57.253 33.333 0.00 0.00 0.00 3.02
1903 2591 9.079833 CATCTTGTACTAAATTTCATTGCCTTG 57.920 33.333 0.00 0.00 0.00 3.61
1958 2653 4.987832 AGTGCAGTTGTAGAGATAACTCG 58.012 43.478 0.00 0.00 46.64 4.18
2057 2752 7.359598 GCAACTGTAACATTTTGTTTGTTGTGA 60.360 33.333 20.76 0.00 41.45 3.58
2063 2758 6.847956 ACATTTTGTTTGTTGTGATGATGG 57.152 33.333 0.00 0.00 0.00 3.51
2080 2777 5.314923 TGATGGAATGTTAGCTCTTTTGC 57.685 39.130 0.00 0.00 0.00 3.68
2087 2784 9.273016 TGGAATGTTAGCTCTTTTGCTATATAC 57.727 33.333 0.00 0.00 43.92 1.47
2088 2785 9.495572 GGAATGTTAGCTCTTTTGCTATATACT 57.504 33.333 0.00 0.00 43.92 2.12
2090 2787 9.495572 AATGTTAGCTCTTTTGCTATATACTCC 57.504 33.333 0.00 0.00 43.92 3.85
2091 2788 8.251383 TGTTAGCTCTTTTGCTATATACTCCT 57.749 34.615 0.00 0.00 43.92 3.69
2092 2789 8.705594 TGTTAGCTCTTTTGCTATATACTCCTT 58.294 33.333 0.00 0.00 43.92 3.36
2093 2790 9.549078 GTTAGCTCTTTTGCTATATACTCCTTT 57.451 33.333 0.00 0.00 43.92 3.11
2095 2792 8.443953 AGCTCTTTTGCTATATACTCCTTTTG 57.556 34.615 0.00 0.00 42.10 2.44
2096 2793 8.049721 AGCTCTTTTGCTATATACTCCTTTTGT 58.950 33.333 0.00 0.00 42.10 2.83
2097 2794 8.678199 GCTCTTTTGCTATATACTCCTTTTGTT 58.322 33.333 0.00 0.00 0.00 2.83
2112 2809 8.924303 ACTCCTTTTGTTTCTAAATTTAAGGCT 58.076 29.630 7.08 0.00 0.00 4.58
2113 2810 9.764363 CTCCTTTTGTTTCTAAATTTAAGGCTT 57.236 29.630 4.58 4.58 0.00 4.35
2144 2841 9.698309 AGAGATTTCAATATGAACTACATACGG 57.302 33.333 0.00 0.00 43.12 4.02
2145 2842 9.692749 GAGATTTCAATATGAACTACATACGGA 57.307 33.333 0.00 0.00 43.12 4.69
2148 2845 9.778741 ATTTCAATATGAACTACATACGGATGT 57.221 29.630 19.12 19.12 43.12 3.06
2172 2869 9.908152 TGTATATAGATGTATTTTGGAGTGTCG 57.092 33.333 0.00 0.00 0.00 4.35
2176 2873 6.910536 AGATGTATTTTGGAGTGTCGATTC 57.089 37.500 0.00 0.00 0.00 2.52
2177 2874 6.406370 AGATGTATTTTGGAGTGTCGATTCA 58.594 36.000 0.00 0.00 0.00 2.57
2178 2875 5.856126 TGTATTTTGGAGTGTCGATTCAC 57.144 39.130 0.00 0.00 38.46 3.18
2187 2884 4.410492 AGTGTCGATTCACTCATTTTGC 57.590 40.909 2.98 0.00 44.07 3.68
2188 2885 4.067896 AGTGTCGATTCACTCATTTTGCT 58.932 39.130 2.98 0.00 44.07 3.91
2189 2886 5.237815 AGTGTCGATTCACTCATTTTGCTA 58.762 37.500 2.98 0.00 44.07 3.49
2190 2887 5.700832 AGTGTCGATTCACTCATTTTGCTAA 59.299 36.000 2.98 0.00 44.07 3.09
2191 2888 6.372659 AGTGTCGATTCACTCATTTTGCTAAT 59.627 34.615 2.98 0.00 44.07 1.73
2192 2889 6.467047 GTGTCGATTCACTCATTTTGCTAATG 59.533 38.462 0.00 5.96 35.68 1.90
2193 2890 6.149308 TGTCGATTCACTCATTTTGCTAATGT 59.851 34.615 10.54 0.00 0.00 2.71
2194 2891 7.333174 TGTCGATTCACTCATTTTGCTAATGTA 59.667 33.333 10.54 0.72 0.00 2.29
2195 2892 7.848051 GTCGATTCACTCATTTTGCTAATGTAG 59.152 37.037 10.54 9.38 0.00 2.74
2196 2893 7.549134 TCGATTCACTCATTTTGCTAATGTAGT 59.451 33.333 10.54 9.82 0.00 2.73
2197 2894 7.848051 CGATTCACTCATTTTGCTAATGTAGTC 59.152 37.037 10.54 3.80 0.00 2.59
2198 2895 6.985188 TCACTCATTTTGCTAATGTAGTCC 57.015 37.500 10.54 0.00 0.00 3.85
2199 2896 5.580691 TCACTCATTTTGCTAATGTAGTCCG 59.419 40.000 10.54 4.97 0.00 4.79
2200 2897 5.351465 CACTCATTTTGCTAATGTAGTCCGT 59.649 40.000 10.54 0.00 0.00 4.69
2201 2898 6.533723 CACTCATTTTGCTAATGTAGTCCGTA 59.466 38.462 10.54 0.00 0.00 4.02
2202 2899 7.224753 CACTCATTTTGCTAATGTAGTCCGTAT 59.775 37.037 10.54 0.00 0.00 3.06
2203 2900 7.769044 ACTCATTTTGCTAATGTAGTCCGTATT 59.231 33.333 10.54 0.00 0.00 1.89
2204 2901 7.915508 TCATTTTGCTAATGTAGTCCGTATTG 58.084 34.615 10.54 0.00 0.00 1.90
2205 2902 7.766738 TCATTTTGCTAATGTAGTCCGTATTGA 59.233 33.333 10.54 0.00 0.00 2.57
2206 2903 7.908827 TTTTGCTAATGTAGTCCGTATTGAA 57.091 32.000 0.00 0.00 0.00 2.69
2207 2904 7.908827 TTTGCTAATGTAGTCCGTATTGAAA 57.091 32.000 0.00 0.00 0.00 2.69
2208 2905 8.500753 TTTGCTAATGTAGTCCGTATTGAAAT 57.499 30.769 0.00 0.00 0.00 2.17
2209 2906 7.709269 TGCTAATGTAGTCCGTATTGAAATC 57.291 36.000 0.00 0.00 0.00 2.17
2210 2907 7.497595 TGCTAATGTAGTCCGTATTGAAATCT 58.502 34.615 0.00 0.00 0.00 2.40
2211 2908 7.652105 TGCTAATGTAGTCCGTATTGAAATCTC 59.348 37.037 0.00 0.00 0.00 2.75
2212 2909 7.868415 GCTAATGTAGTCCGTATTGAAATCTCT 59.132 37.037 0.00 0.00 0.00 3.10
2217 2914 9.932207 TGTAGTCCGTATTGAAATCTCTAAAAA 57.068 29.630 0.00 0.00 0.00 1.94
2220 2917 9.449719 AGTCCGTATTGAAATCTCTAAAAATGT 57.550 29.630 0.00 0.00 0.00 2.71
2221 2918 9.704098 GTCCGTATTGAAATCTCTAAAAATGTC 57.296 33.333 0.00 0.00 0.00 3.06
2222 2919 9.667107 TCCGTATTGAAATCTCTAAAAATGTCT 57.333 29.630 0.00 0.00 0.00 3.41
2243 2940 8.985315 TGTCTTATACTCTATTTAGGAACGGA 57.015 34.615 0.00 0.00 0.00 4.69
2244 2941 9.064706 TGTCTTATACTCTATTTAGGAACGGAG 57.935 37.037 0.00 0.00 0.00 4.63
2245 2942 8.513774 GTCTTATACTCTATTTAGGAACGGAGG 58.486 40.741 0.00 0.00 0.00 4.30
2246 2943 7.668886 TCTTATACTCTATTTAGGAACGGAGGG 59.331 40.741 0.00 0.00 0.00 4.30
2247 2944 4.261411 ACTCTATTTAGGAACGGAGGGA 57.739 45.455 0.00 0.00 0.00 4.20
2248 2945 4.216708 ACTCTATTTAGGAACGGAGGGAG 58.783 47.826 0.00 0.00 0.00 4.30
2249 2946 4.216708 CTCTATTTAGGAACGGAGGGAGT 58.783 47.826 0.00 0.00 0.00 3.85
2250 2947 5.103771 ACTCTATTTAGGAACGGAGGGAGTA 60.104 44.000 0.00 0.00 0.00 2.59
2251 2948 5.961897 TCTATTTAGGAACGGAGGGAGTAT 58.038 41.667 0.00 0.00 0.00 2.12
2252 2949 4.957684 ATTTAGGAACGGAGGGAGTATG 57.042 45.455 0.00 0.00 0.00 2.39
2277 2974 4.792521 AGAGTCGCTGATGAACTTTACT 57.207 40.909 0.00 0.00 0.00 2.24
2278 2975 4.739195 AGAGTCGCTGATGAACTTTACTC 58.261 43.478 0.00 0.00 33.86 2.59
2291 2998 3.275999 ACTTTACTCCGCACACTTGTTT 58.724 40.909 0.00 0.00 0.00 2.83
2293 3000 3.955771 TTACTCCGCACACTTGTTTTC 57.044 42.857 0.00 0.00 0.00 2.29
2370 3084 3.273434 TGCCTCTTTAGCATTGTAGCAG 58.727 45.455 0.00 0.00 34.69 4.24
2371 3085 2.032675 GCCTCTTTAGCATTGTAGCAGC 59.967 50.000 0.00 0.00 36.85 5.25
2380 3094 3.197766 AGCATTGTAGCAGCCAGTACTTA 59.802 43.478 0.00 0.00 36.85 2.24
2383 3097 3.868757 TGTAGCAGCCAGTACTTACAG 57.131 47.619 0.00 0.00 0.00 2.74
2395 3109 9.350951 AGCCAGTACTTACAGTTTCTTTTTAAT 57.649 29.630 0.00 0.00 0.00 1.40
2396 3110 9.394477 GCCAGTACTTACAGTTTCTTTTTAATG 57.606 33.333 0.00 0.00 0.00 1.90
2509 3235 2.158986 TGCATGCCCATTTTTATTCCGG 60.159 45.455 16.68 0.00 0.00 5.14
2522 3248 4.886247 TTATTCCGGCCTACAAATTTCG 57.114 40.909 0.00 0.00 0.00 3.46
2524 3250 3.331478 TTCCGGCCTACAAATTTCGTA 57.669 42.857 0.00 0.00 0.00 3.43
2644 3370 2.927553 ATCCTTGCATTCTGAAACGC 57.072 45.000 7.90 7.90 0.00 4.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.296985 TTGGGATAGGGGGTGCCCT 62.297 63.158 7.26 0.00 44.66 5.19
46 47 1.145759 ATAGCAATGGTGTCGACGCG 61.146 55.000 21.89 3.53 0.00 6.01
55 56 1.068121 GGGGGAGCTATAGCAATGGT 58.932 55.000 26.07 5.26 45.16 3.55
64 65 2.079161 ATGGGGGATGGGGGAGCTAT 62.079 60.000 0.00 0.00 0.00 2.97
66 67 4.143266 ATGGGGGATGGGGGAGCT 62.143 66.667 0.00 0.00 0.00 4.09
72 73 2.895424 GCTACGGATGGGGGATGGG 61.895 68.421 0.00 0.00 0.00 4.00
73 74 2.146724 TGCTACGGATGGGGGATGG 61.147 63.158 0.00 0.00 0.00 3.51
74 75 1.071471 GTGCTACGGATGGGGGATG 59.929 63.158 0.00 0.00 0.00 3.51
75 76 2.147387 GGTGCTACGGATGGGGGAT 61.147 63.158 0.00 0.00 0.00 3.85
76 77 2.766651 GGTGCTACGGATGGGGGA 60.767 66.667 0.00 0.00 0.00 4.81
77 78 3.873812 GGGTGCTACGGATGGGGG 61.874 72.222 0.00 0.00 0.00 5.40
78 79 4.235762 CGGGTGCTACGGATGGGG 62.236 72.222 0.00 0.00 0.00 4.96
88 89 4.057428 GACAGCGTCTCGGGTGCT 62.057 66.667 0.00 0.00 38.95 4.40
103 104 4.803426 CACGGCGCCTCCTCTGAC 62.803 72.222 26.68 0.00 0.00 3.51
119 120 0.035534 AGCATACAACCACATCCGCA 60.036 50.000 0.00 0.00 0.00 5.69
120 121 0.657840 GAGCATACAACCACATCCGC 59.342 55.000 0.00 0.00 0.00 5.54
122 123 2.717639 AGGAGCATACAACCACATCC 57.282 50.000 0.00 0.00 0.00 3.51
164 175 4.838486 GCGAGACCCACGAGAGCG 62.838 72.222 0.00 0.00 44.79 5.03
205 216 1.623811 ACAAGGTCTTAGACATGGCGT 59.376 47.619 14.72 3.22 33.68 5.68
216 227 1.370064 CGTTCCCCGACAAGGTCTT 59.630 57.895 0.00 0.00 39.56 3.01
223 234 2.358125 CATGCACGTTCCCCGACA 60.358 61.111 0.00 0.00 40.70 4.35
225 236 3.309436 CTCCATGCACGTTCCCCGA 62.309 63.158 0.00 0.00 40.70 5.14
226 237 2.819595 CTCCATGCACGTTCCCCG 60.820 66.667 0.00 0.00 44.03 5.73
276 287 4.814294 GTGTAGTCTGCGGCCCCG 62.814 72.222 1.59 1.59 43.09 5.73
282 293 0.038251 TGCCAAGAGTGTAGTCTGCG 60.038 55.000 0.00 0.00 0.00 5.18
285 296 0.977395 GGGTGCCAAGAGTGTAGTCT 59.023 55.000 0.00 0.00 0.00 3.24
290 301 0.766674 TACAGGGGTGCCAAGAGTGT 60.767 55.000 0.00 0.00 0.00 3.55
292 303 0.620556 CATACAGGGGTGCCAAGAGT 59.379 55.000 0.00 0.00 0.00 3.24
306 317 2.897271 AATCAAGCACCACCCATACA 57.103 45.000 0.00 0.00 0.00 2.29
308 319 6.429692 CGATATAAAATCAAGCACCACCCATA 59.570 38.462 0.00 0.00 0.00 2.74
313 324 4.556699 GCCCGATATAAAATCAAGCACCAC 60.557 45.833 0.00 0.00 0.00 4.16
346 359 4.410400 CCCACCAGCCGACTTCCC 62.410 72.222 0.00 0.00 0.00 3.97
350 363 3.314331 CACTCCCACCAGCCGACT 61.314 66.667 0.00 0.00 0.00 4.18
366 1003 1.456145 TAGGTCTTATCGGCCGCCA 60.456 57.895 23.51 7.47 0.00 5.69
374 1011 4.390264 GACCCATTTGGCTAGGTCTTATC 58.610 47.826 0.80 0.00 44.46 1.75
377 1014 1.065418 CGACCCATTTGGCTAGGTCTT 60.065 52.381 6.48 0.00 45.45 3.01
378 1015 0.541863 CGACCCATTTGGCTAGGTCT 59.458 55.000 6.48 0.00 45.45 3.85
380 1017 1.607612 CCGACCCATTTGGCTAGGT 59.392 57.895 0.00 0.00 37.83 3.08
381 1018 1.152963 CCCGACCCATTTGGCTAGG 60.153 63.158 0.00 0.00 37.83 3.02
382 1019 0.463833 GTCCCGACCCATTTGGCTAG 60.464 60.000 0.00 0.00 37.83 3.42
383 1020 0.912487 AGTCCCGACCCATTTGGCTA 60.912 55.000 0.00 0.00 37.83 3.93
385 1022 2.046285 CAGTCCCGACCCATTTGGC 61.046 63.158 0.00 0.00 37.83 4.52
386 1023 2.046285 GCAGTCCCGACCCATTTGG 61.046 63.158 0.00 0.00 41.37 3.28
387 1024 2.046285 GGCAGTCCCGACCCATTTG 61.046 63.158 0.00 0.00 0.00 2.32
388 1025 2.231380 AGGCAGTCCCGACCCATTT 61.231 57.895 0.00 0.00 39.21 2.32
389 1026 2.610859 AGGCAGTCCCGACCCATT 60.611 61.111 0.00 0.00 39.21 3.16
390 1027 3.402681 CAGGCAGTCCCGACCCAT 61.403 66.667 0.00 0.00 39.21 4.00
391 1028 4.631740 TCAGGCAGTCCCGACCCA 62.632 66.667 0.00 0.00 39.21 4.51
392 1029 4.083862 GTCAGGCAGTCCCGACCC 62.084 72.222 0.00 0.00 39.21 4.46
393 1030 4.083862 GGTCAGGCAGTCCCGACC 62.084 72.222 1.38 1.38 44.25 4.79
394 1031 4.083862 GGGTCAGGCAGTCCCGAC 62.084 72.222 0.00 0.00 35.84 4.79
398 1035 4.083862 GACGGGGTCAGGCAGTCC 62.084 72.222 0.00 0.00 32.09 3.85
399 1036 4.083862 GGACGGGGTCAGGCAGTC 62.084 72.222 0.00 0.00 33.68 3.51
413 1050 1.272037 TGTTTTAATGGGGGTCGGGAC 60.272 52.381 0.00 0.00 0.00 4.46
414 1051 1.073931 TGTTTTAATGGGGGTCGGGA 58.926 50.000 0.00 0.00 0.00 5.14
415 1052 1.754226 CATGTTTTAATGGGGGTCGGG 59.246 52.381 0.00 0.00 0.00 5.14
416 1053 1.136110 GCATGTTTTAATGGGGGTCGG 59.864 52.381 0.00 0.00 0.00 4.79
417 1054 1.136110 GGCATGTTTTAATGGGGGTCG 59.864 52.381 0.00 0.00 0.00 4.79
418 1055 2.168313 CAGGCATGTTTTAATGGGGGTC 59.832 50.000 0.00 0.00 0.00 4.46
419 1056 2.187100 CAGGCATGTTTTAATGGGGGT 58.813 47.619 0.00 0.00 0.00 4.95
420 1057 1.485895 CCAGGCATGTTTTAATGGGGG 59.514 52.381 0.00 0.00 0.00 5.40
421 1058 1.134431 GCCAGGCATGTTTTAATGGGG 60.134 52.381 6.55 0.00 0.00 4.96
422 1059 1.554160 TGCCAGGCATGTTTTAATGGG 59.446 47.619 11.22 0.00 31.71 4.00
423 1060 2.620242 GTGCCAGGCATGTTTTAATGG 58.380 47.619 19.75 0.00 41.91 3.16
424 1061 2.094803 TCGTGCCAGGCATGTTTTAATG 60.095 45.455 29.45 5.34 44.84 1.90
425 1062 2.094752 GTCGTGCCAGGCATGTTTTAAT 60.095 45.455 29.45 0.00 44.84 1.40
426 1063 1.268352 GTCGTGCCAGGCATGTTTTAA 59.732 47.619 29.45 10.45 44.84 1.52
427 1064 0.878416 GTCGTGCCAGGCATGTTTTA 59.122 50.000 29.45 10.83 44.84 1.52
428 1065 1.106351 TGTCGTGCCAGGCATGTTTT 61.106 50.000 29.45 0.00 44.84 2.43
429 1066 1.528076 TGTCGTGCCAGGCATGTTT 60.528 52.632 29.45 0.00 44.84 2.83
430 1067 2.112928 TGTCGTGCCAGGCATGTT 59.887 55.556 29.45 0.00 44.84 2.71
431 1068 2.669569 GTGTCGTGCCAGGCATGT 60.670 61.111 29.45 0.00 44.84 3.21
432 1069 2.669229 TGTGTCGTGCCAGGCATG 60.669 61.111 25.99 25.99 45.79 4.06
433 1070 2.359107 CTGTGTCGTGCCAGGCAT 60.359 61.111 19.75 0.00 41.91 4.40
440 1077 3.434319 CCATGGGCTGTGTCGTGC 61.434 66.667 2.85 0.00 0.00 5.34
441 1078 3.434319 GCCATGGGCTGTGTCGTG 61.434 66.667 15.13 0.00 46.69 4.35
450 1087 2.185004 ATATACAAGTCGCCATGGGC 57.815 50.000 15.13 4.92 46.75 5.36
451 1088 5.705441 ACATTTATATACAAGTCGCCATGGG 59.295 40.000 15.13 3.69 0.00 4.00
452 1089 6.204688 ACACATTTATATACAAGTCGCCATGG 59.795 38.462 7.63 7.63 0.00 3.66
453 1090 7.171508 AGACACATTTATATACAAGTCGCCATG 59.828 37.037 0.00 0.00 0.00 3.66
454 1091 7.217200 AGACACATTTATATACAAGTCGCCAT 58.783 34.615 0.00 0.00 0.00 4.40
455 1092 6.578944 AGACACATTTATATACAAGTCGCCA 58.421 36.000 0.00 0.00 0.00 5.69
456 1093 7.345192 CAAGACACATTTATATACAAGTCGCC 58.655 38.462 0.00 0.00 0.00 5.54
457 1094 6.846283 GCAAGACACATTTATATACAAGTCGC 59.154 38.462 0.00 0.00 0.00 5.19
458 1095 7.345192 GGCAAGACACATTTATATACAAGTCG 58.655 38.462 0.00 0.00 0.00 4.18
459 1096 7.011109 ACGGCAAGACACATTTATATACAAGTC 59.989 37.037 0.00 0.00 0.00 3.01
460 1097 6.821665 ACGGCAAGACACATTTATATACAAGT 59.178 34.615 0.00 0.00 0.00 3.16
461 1098 7.125755 CACGGCAAGACACATTTATATACAAG 58.874 38.462 0.00 0.00 0.00 3.16
462 1099 6.596106 ACACGGCAAGACACATTTATATACAA 59.404 34.615 0.00 0.00 0.00 2.41
463 1100 6.110033 ACACGGCAAGACACATTTATATACA 58.890 36.000 0.00 0.00 0.00 2.29
464 1101 6.561533 CGACACGGCAAGACACATTTATATAC 60.562 42.308 0.00 0.00 0.00 1.47
465 1102 5.460748 CGACACGGCAAGACACATTTATATA 59.539 40.000 0.00 0.00 0.00 0.86
466 1103 4.270084 CGACACGGCAAGACACATTTATAT 59.730 41.667 0.00 0.00 0.00 0.86
467 1104 3.615056 CGACACGGCAAGACACATTTATA 59.385 43.478 0.00 0.00 0.00 0.98
468 1105 2.415168 CGACACGGCAAGACACATTTAT 59.585 45.455 0.00 0.00 0.00 1.40
469 1106 1.795872 CGACACGGCAAGACACATTTA 59.204 47.619 0.00 0.00 0.00 1.40
470 1107 0.586319 CGACACGGCAAGACACATTT 59.414 50.000 0.00 0.00 0.00 2.32
471 1108 0.249699 TCGACACGGCAAGACACATT 60.250 50.000 0.00 0.00 0.00 2.71
472 1109 0.944311 GTCGACACGGCAAGACACAT 60.944 55.000 11.55 0.00 34.09 3.21
473 1110 1.590525 GTCGACACGGCAAGACACA 60.591 57.895 11.55 0.00 34.09 3.72
474 1111 1.276145 GAGTCGACACGGCAAGACAC 61.276 60.000 19.50 0.00 36.18 3.67
475 1112 1.007734 GAGTCGACACGGCAAGACA 60.008 57.895 19.50 0.00 36.18 3.41
476 1113 2.081212 CGAGTCGACACGGCAAGAC 61.081 63.158 24.93 1.61 32.13 3.01
477 1114 2.254350 CGAGTCGACACGGCAAGA 59.746 61.111 24.93 0.00 32.13 3.02
478 1115 3.470567 GCGAGTCGACACGGCAAG 61.471 66.667 31.17 8.70 32.13 4.01
479 1116 3.973516 AGCGAGTCGACACGGCAA 61.974 61.111 31.17 0.00 32.13 4.52
480 1117 4.700365 CAGCGAGTCGACACGGCA 62.700 66.667 31.17 0.00 32.13 5.69
494 1131 2.505557 GCATGAAAGTGCGGCAGC 60.506 61.111 1.18 0.31 45.41 5.25
495 1132 2.180017 GGCATGAAAGTGCGGCAG 59.820 61.111 1.18 0.00 45.97 4.85
496 1133 3.372730 GGGCATGAAAGTGCGGCA 61.373 61.111 0.00 0.00 45.97 5.69
497 1134 3.346631 CTGGGCATGAAAGTGCGGC 62.347 63.158 0.00 0.00 45.97 6.53
498 1135 2.703798 CCTGGGCATGAAAGTGCGG 61.704 63.158 0.00 0.00 45.97 5.69
499 1136 2.879907 CCTGGGCATGAAAGTGCG 59.120 61.111 0.00 0.00 45.97 5.34
500 1137 2.575461 GCCTGGGCATGAAAGTGC 59.425 61.111 6.75 0.00 44.31 4.40
511 1148 4.728102 TAACGCGTCGTGCCTGGG 62.728 66.667 14.44 0.00 39.99 4.45
512 1149 3.179265 CTAACGCGTCGTGCCTGG 61.179 66.667 14.44 0.00 39.99 4.45
513 1150 0.730155 TAACTAACGCGTCGTGCCTG 60.730 55.000 14.44 0.23 39.99 4.85
514 1151 0.039256 TTAACTAACGCGTCGTGCCT 60.039 50.000 14.44 0.00 39.99 4.75
515 1152 0.783579 TTTAACTAACGCGTCGTGCC 59.216 50.000 14.44 0.00 39.99 5.01
516 1153 2.159934 ACATTTAACTAACGCGTCGTGC 60.160 45.455 14.44 0.00 39.99 5.34
517 1154 3.121261 ACACATTTAACTAACGCGTCGTG 60.121 43.478 14.44 8.47 39.99 4.35
518 1155 3.052036 ACACATTTAACTAACGCGTCGT 58.948 40.909 14.44 10.64 43.97 4.34
519 1156 3.642210 GACACATTTAACTAACGCGTCG 58.358 45.455 14.44 9.87 0.00 5.12
520 1157 3.480825 CCGACACATTTAACTAACGCGTC 60.481 47.826 14.44 0.00 0.00 5.19
521 1158 2.409378 CCGACACATTTAACTAACGCGT 59.591 45.455 5.58 5.58 0.00 6.01
522 1159 2.781973 GCCGACACATTTAACTAACGCG 60.782 50.000 3.53 3.53 0.00 6.01
523 1160 2.414138 AGCCGACACATTTAACTAACGC 59.586 45.455 0.00 0.00 0.00 4.84
524 1161 3.241552 CGAGCCGACACATTTAACTAACG 60.242 47.826 0.00 0.00 0.00 3.18
525 1162 3.676646 ACGAGCCGACACATTTAACTAAC 59.323 43.478 1.50 0.00 0.00 2.34
526 1163 3.676172 CACGAGCCGACACATTTAACTAA 59.324 43.478 1.50 0.00 0.00 2.24
527 1164 3.057386 TCACGAGCCGACACATTTAACTA 60.057 43.478 1.50 0.00 0.00 2.24
528 1165 2.066262 CACGAGCCGACACATTTAACT 58.934 47.619 1.50 0.00 0.00 2.24
529 1166 2.063266 TCACGAGCCGACACATTTAAC 58.937 47.619 1.50 0.00 0.00 2.01
530 1167 2.063266 GTCACGAGCCGACACATTTAA 58.937 47.619 1.50 0.00 33.43 1.52
531 1168 1.271379 AGTCACGAGCCGACACATTTA 59.729 47.619 1.50 0.00 35.77 1.40
532 1169 0.033504 AGTCACGAGCCGACACATTT 59.966 50.000 1.50 0.00 35.77 2.32
533 1170 0.388649 GAGTCACGAGCCGACACATT 60.389 55.000 1.50 0.00 35.77 2.71
534 1171 1.213013 GAGTCACGAGCCGACACAT 59.787 57.895 1.50 0.00 35.77 3.21
535 1172 2.643272 GAGTCACGAGCCGACACA 59.357 61.111 1.50 0.00 35.77 3.72
536 1173 2.502080 CGAGTCACGAGCCGACAC 60.502 66.667 1.50 0.00 45.77 3.67
537 1174 2.067091 AAACGAGTCACGAGCCGACA 62.067 55.000 0.00 0.00 45.77 4.35
538 1175 0.110056 TAAACGAGTCACGAGCCGAC 60.110 55.000 0.00 0.00 45.77 4.79
539 1176 0.806868 ATAAACGAGTCACGAGCCGA 59.193 50.000 0.00 0.00 45.77 5.54
540 1177 1.189403 GATAAACGAGTCACGAGCCG 58.811 55.000 0.00 0.00 45.77 5.52
541 1178 1.189403 CGATAAACGAGTCACGAGCC 58.811 55.000 0.00 0.00 45.77 4.70
542 1179 0.566593 GCGATAAACGAGTCACGAGC 59.433 55.000 0.00 0.00 45.77 5.03
543 1180 2.175530 AGCGATAAACGAGTCACGAG 57.824 50.000 0.00 0.00 45.77 4.18
544 1181 2.247637 CAAGCGATAAACGAGTCACGA 58.752 47.619 0.00 0.00 45.77 4.35
545 1182 1.983605 ACAAGCGATAAACGAGTCACG 59.016 47.619 0.00 0.00 45.77 4.35
546 1183 2.984471 TCACAAGCGATAAACGAGTCAC 59.016 45.455 0.00 0.00 45.77 3.67
547 1184 3.242518 CTCACAAGCGATAAACGAGTCA 58.757 45.455 0.00 0.00 45.77 3.41
550 1187 2.703190 GCTCACAAGCGATAAACGAG 57.297 50.000 0.00 0.00 45.77 4.18
568 1205 0.179124 TTGACCCAAAAGCACGTTGC 60.179 50.000 2.28 2.28 45.46 4.17
569 1206 2.507339 ATTGACCCAAAAGCACGTTG 57.493 45.000 0.00 0.00 0.00 4.10
570 1207 3.194062 CAAATTGACCCAAAAGCACGTT 58.806 40.909 0.00 0.00 0.00 3.99
571 1208 2.482839 CCAAATTGACCCAAAAGCACGT 60.483 45.455 0.00 0.00 0.00 4.49
572 1209 2.134346 CCAAATTGACCCAAAAGCACG 58.866 47.619 0.00 0.00 0.00 5.34
574 1211 1.202746 GCCCAAATTGACCCAAAAGCA 60.203 47.619 0.00 0.00 0.00 3.91
575 1212 1.072173 AGCCCAAATTGACCCAAAAGC 59.928 47.619 0.00 0.00 0.00 3.51
577 1214 2.122768 ACAGCCCAAATTGACCCAAAA 58.877 42.857 0.00 0.00 0.00 2.44
578 1215 1.799933 ACAGCCCAAATTGACCCAAA 58.200 45.000 0.00 0.00 0.00 3.28
579 1216 1.799933 AACAGCCCAAATTGACCCAA 58.200 45.000 0.00 0.00 0.00 4.12
580 1217 1.799933 AAACAGCCCAAATTGACCCA 58.200 45.000 0.00 0.00 0.00 4.51
581 1218 2.103941 TCAAAACAGCCCAAATTGACCC 59.896 45.455 0.00 0.00 0.00 4.46
582 1219 3.392882 CTCAAAACAGCCCAAATTGACC 58.607 45.455 0.00 0.00 0.00 4.02
583 1220 3.392882 CCTCAAAACAGCCCAAATTGAC 58.607 45.455 0.00 0.00 0.00 3.18
585 1222 2.104622 ACCCTCAAAACAGCCCAAATTG 59.895 45.455 0.00 0.00 0.00 2.32
586 1223 2.407562 ACCCTCAAAACAGCCCAAATT 58.592 42.857 0.00 0.00 0.00 1.82
588 1225 1.872773 AACCCTCAAAACAGCCCAAA 58.127 45.000 0.00 0.00 0.00 3.28
589 1226 1.760029 GAAACCCTCAAAACAGCCCAA 59.240 47.619 0.00 0.00 0.00 4.12
590 1227 1.063266 AGAAACCCTCAAAACAGCCCA 60.063 47.619 0.00 0.00 0.00 5.36
591 1228 1.704641 AGAAACCCTCAAAACAGCCC 58.295 50.000 0.00 0.00 0.00 5.19
592 1229 5.123979 CAGTATAGAAACCCTCAAAACAGCC 59.876 44.000 0.00 0.00 0.00 4.85
594 1231 7.745620 AACAGTATAGAAACCCTCAAAACAG 57.254 36.000 0.00 0.00 0.00 3.16
596 1233 9.244799 CAAAAACAGTATAGAAACCCTCAAAAC 57.755 33.333 0.00 0.00 0.00 2.43
597 1234 8.417884 CCAAAAACAGTATAGAAACCCTCAAAA 58.582 33.333 0.00 0.00 0.00 2.44
598 1235 7.014808 CCCAAAAACAGTATAGAAACCCTCAAA 59.985 37.037 0.00 0.00 0.00 2.69
599 1236 6.492087 CCCAAAAACAGTATAGAAACCCTCAA 59.508 38.462 0.00 0.00 0.00 3.02
600 1237 6.007703 CCCAAAAACAGTATAGAAACCCTCA 58.992 40.000 0.00 0.00 0.00 3.86
601 1238 5.417894 CCCCAAAAACAGTATAGAAACCCTC 59.582 44.000 0.00 0.00 0.00 4.30
602 1239 5.330233 CCCCAAAAACAGTATAGAAACCCT 58.670 41.667 0.00 0.00 0.00 4.34
603 1240 4.081862 GCCCCAAAAACAGTATAGAAACCC 60.082 45.833 0.00 0.00 0.00 4.11
604 1241 4.081862 GGCCCCAAAAACAGTATAGAAACC 60.082 45.833 0.00 0.00 0.00 3.27
605 1242 4.770531 AGGCCCCAAAAACAGTATAGAAAC 59.229 41.667 0.00 0.00 0.00 2.78
606 1243 5.005628 AGGCCCCAAAAACAGTATAGAAA 57.994 39.130 0.00 0.00 0.00 2.52
607 1244 4.668138 AGGCCCCAAAAACAGTATAGAA 57.332 40.909 0.00 0.00 0.00 2.10
608 1245 5.987019 ATAGGCCCCAAAAACAGTATAGA 57.013 39.130 0.00 0.00 0.00 1.98
609 1246 6.379988 ACAAATAGGCCCCAAAAACAGTATAG 59.620 38.462 0.00 0.00 0.00 1.31
610 1247 6.257586 ACAAATAGGCCCCAAAAACAGTATA 58.742 36.000 0.00 0.00 0.00 1.47
611 1248 5.090845 ACAAATAGGCCCCAAAAACAGTAT 58.909 37.500 0.00 0.00 0.00 2.12
612 1249 4.484912 ACAAATAGGCCCCAAAAACAGTA 58.515 39.130 0.00 0.00 0.00 2.74
613 1250 3.313791 ACAAATAGGCCCCAAAAACAGT 58.686 40.909 0.00 0.00 0.00 3.55
614 1251 3.323403 TGACAAATAGGCCCCAAAAACAG 59.677 43.478 0.00 0.00 0.00 3.16
615 1252 3.309296 TGACAAATAGGCCCCAAAAACA 58.691 40.909 0.00 0.00 0.00 2.83
616 1253 4.344359 TTGACAAATAGGCCCCAAAAAC 57.656 40.909 0.00 0.00 0.00 2.43
617 1254 5.373812 TTTTGACAAATAGGCCCCAAAAA 57.626 34.783 0.00 0.00 32.67 1.94
618 1255 5.373812 TTTTTGACAAATAGGCCCCAAAA 57.626 34.783 0.00 2.75 33.42 2.44
619 1256 5.574970 ATTTTTGACAAATAGGCCCCAAA 57.425 34.783 0.00 0.00 0.00 3.28
620 1257 6.688073 TTATTTTTGACAAATAGGCCCCAA 57.312 33.333 0.00 0.00 0.00 4.12
621 1258 6.882768 ATTATTTTTGACAAATAGGCCCCA 57.117 33.333 0.00 0.00 0.00 4.96
622 1259 7.564793 AGAATTATTTTTGACAAATAGGCCCC 58.435 34.615 0.00 0.00 0.00 5.80
713 1350 1.185618 ACGAAGCTAGGTGCCAGACA 61.186 55.000 0.00 0.00 44.23 3.41
714 1351 0.737715 CACGAAGCTAGGTGCCAGAC 60.738 60.000 0.00 0.00 44.23 3.51
715 1352 1.591703 CACGAAGCTAGGTGCCAGA 59.408 57.895 0.00 0.00 44.23 3.86
716 1353 1.448540 CCACGAAGCTAGGTGCCAG 60.449 63.158 10.70 0.00 44.23 4.85
717 1354 2.662596 CCACGAAGCTAGGTGCCA 59.337 61.111 10.70 0.00 44.23 4.92
718 1355 2.820037 GCCACGAAGCTAGGTGCC 60.820 66.667 10.70 0.00 44.23 5.01
719 1356 2.820037 GGCCACGAAGCTAGGTGC 60.820 66.667 10.70 0.00 43.29 5.01
720 1357 2.125106 GGGCCACGAAGCTAGGTG 60.125 66.667 4.39 9.50 0.00 4.00
721 1358 2.606519 TGGGCCACGAAGCTAGGT 60.607 61.111 0.00 0.00 0.00 3.08
722 1359 2.187946 CTGGGCCACGAAGCTAGG 59.812 66.667 0.00 0.00 0.00 3.02
723 1360 2.187946 CCTGGGCCACGAAGCTAG 59.812 66.667 0.00 0.00 0.00 3.42
724 1361 4.096003 GCCTGGGCCACGAAGCTA 62.096 66.667 0.00 0.00 34.56 3.32
753 1390 2.823829 GCTAAATGGGCCGTGCTCG 61.824 63.158 0.00 0.14 0.00 5.03
754 1391 2.481471 GGCTAAATGGGCCGTGCTC 61.481 63.158 0.00 0.00 40.19 4.26
755 1392 2.440247 GGCTAAATGGGCCGTGCT 60.440 61.111 0.00 0.00 40.19 4.40
761 1398 1.257055 TGGCACTTGGCTAAATGGGC 61.257 55.000 4.25 0.00 44.01 5.36
762 1399 1.488390 ATGGCACTTGGCTAAATGGG 58.512 50.000 4.25 0.00 44.01 4.00
763 1400 3.615224 AAATGGCACTTGGCTAAATGG 57.385 42.857 4.25 0.00 44.01 3.16
764 1401 5.111293 CCTAAAATGGCACTTGGCTAAATG 58.889 41.667 4.25 0.00 44.01 2.32
765 1402 5.343307 CCTAAAATGGCACTTGGCTAAAT 57.657 39.130 4.25 0.00 44.01 1.40
766 1403 4.799564 CCTAAAATGGCACTTGGCTAAA 57.200 40.909 4.25 0.00 44.01 1.85
778 1415 3.099141 ACACTTCATGGGCCTAAAATGG 58.901 45.455 4.53 0.00 0.00 3.16
779 1416 3.181497 CGACACTTCATGGGCCTAAAATG 60.181 47.826 4.53 0.00 0.00 2.32
780 1417 3.016736 CGACACTTCATGGGCCTAAAAT 58.983 45.455 4.53 0.00 0.00 1.82
781 1418 2.432444 CGACACTTCATGGGCCTAAAA 58.568 47.619 4.53 0.00 0.00 1.52
782 1419 1.339631 CCGACACTTCATGGGCCTAAA 60.340 52.381 4.53 0.00 0.00 1.85
783 1420 0.251916 CCGACACTTCATGGGCCTAA 59.748 55.000 4.53 0.00 0.00 2.69
784 1421 1.622607 CCCGACACTTCATGGGCCTA 61.623 60.000 4.53 0.00 34.25 3.93
785 1422 2.671070 CCGACACTTCATGGGCCT 59.329 61.111 4.53 0.00 0.00 5.19
786 1423 2.438434 CCCGACACTTCATGGGCC 60.438 66.667 0.00 0.00 34.25 5.80
788 1425 2.040544 GTGCCCGACACTTCATGGG 61.041 63.158 0.00 0.00 46.41 4.00
789 1426 3.578456 GTGCCCGACACTTCATGG 58.422 61.111 0.00 0.00 46.41 3.66
829 1466 4.039092 CAGACCTGGCCACCTGGG 62.039 72.222 13.74 10.61 45.34 4.45
830 1467 3.252284 ACAGACCTGGCCACCTGG 61.252 66.667 22.01 16.41 46.30 4.45
831 1468 2.033141 CACAGACCTGGCCACCTG 59.967 66.667 18.47 18.47 34.19 4.00
832 1469 3.252284 CCACAGACCTGGCCACCT 61.252 66.667 0.00 0.00 34.19 4.00
838 1475 2.124983 CATCGGCCACAGACCTGG 60.125 66.667 2.24 0.00 34.19 4.45
839 1476 2.821366 GCATCGGCCACAGACCTG 60.821 66.667 2.24 0.00 0.00 4.00
840 1477 3.320879 CTGCATCGGCCACAGACCT 62.321 63.158 2.24 0.00 40.13 3.85
841 1478 2.821366 CTGCATCGGCCACAGACC 60.821 66.667 2.24 0.00 40.13 3.85
842 1479 2.821366 CCTGCATCGGCCACAGAC 60.821 66.667 2.24 0.00 40.13 3.51
843 1480 4.100084 CCCTGCATCGGCCACAGA 62.100 66.667 2.24 0.00 40.13 3.41
859 1496 2.966516 CCTATACTTCTCAGTGTCCCCC 59.033 54.545 0.00 0.00 34.06 5.40
860 1497 3.385111 CACCTATACTTCTCAGTGTCCCC 59.615 52.174 0.00 0.00 34.06 4.81
861 1498 3.385111 CCACCTATACTTCTCAGTGTCCC 59.615 52.174 0.00 0.00 34.06 4.46
862 1499 4.279145 TCCACCTATACTTCTCAGTGTCC 58.721 47.826 0.00 0.00 34.06 4.02
863 1500 5.194432 TCTCCACCTATACTTCTCAGTGTC 58.806 45.833 0.00 0.00 34.06 3.67
864 1501 5.194473 TCTCCACCTATACTTCTCAGTGT 57.806 43.478 0.00 0.00 34.06 3.55
865 1502 5.596361 ACATCTCCACCTATACTTCTCAGTG 59.404 44.000 0.00 0.00 34.06 3.66
866 1503 5.772004 ACATCTCCACCTATACTTCTCAGT 58.228 41.667 0.00 0.00 36.99 3.41
867 1504 6.432783 CCTACATCTCCACCTATACTTCTCAG 59.567 46.154 0.00 0.00 0.00 3.35
868 1505 6.126156 ACCTACATCTCCACCTATACTTCTCA 60.126 42.308 0.00 0.00 0.00 3.27
869 1506 6.207810 CACCTACATCTCCACCTATACTTCTC 59.792 46.154 0.00 0.00 0.00 2.87
870 1507 6.071984 CACCTACATCTCCACCTATACTTCT 58.928 44.000 0.00 0.00 0.00 2.85
871 1508 6.069331 TCACCTACATCTCCACCTATACTTC 58.931 44.000 0.00 0.00 0.00 3.01
877 1514 2.585900 ACCTCACCTACATCTCCACCTA 59.414 50.000 0.00 0.00 0.00 3.08
900 1537 1.227249 TTGACCCCAACTCCTCCAAA 58.773 50.000 0.00 0.00 0.00 3.28
901 1538 1.227249 TTTGACCCCAACTCCTCCAA 58.773 50.000 0.00 0.00 30.88 3.53
902 1539 1.227249 TTTTGACCCCAACTCCTCCA 58.773 50.000 0.00 0.00 30.88 3.86
903 1540 2.375014 TTTTTGACCCCAACTCCTCC 57.625 50.000 0.00 0.00 30.88 4.30
904 1541 3.496331 TGATTTTTGACCCCAACTCCTC 58.504 45.455 0.00 0.00 30.88 3.71
905 1542 3.117131 ACTGATTTTTGACCCCAACTCCT 60.117 43.478 0.00 0.00 30.88 3.69
906 1543 3.005791 CACTGATTTTTGACCCCAACTCC 59.994 47.826 0.00 0.00 30.88 3.85
907 1544 3.888930 TCACTGATTTTTGACCCCAACTC 59.111 43.478 0.00 0.00 30.88 3.01
908 1545 3.891366 CTCACTGATTTTTGACCCCAACT 59.109 43.478 0.00 0.00 30.88 3.16
909 1546 3.636764 ACTCACTGATTTTTGACCCCAAC 59.363 43.478 0.00 0.00 30.88 3.77
910 1547 3.636300 CACTCACTGATTTTTGACCCCAA 59.364 43.478 0.00 0.00 0.00 4.12
911 1548 3.221771 CACTCACTGATTTTTGACCCCA 58.778 45.455 0.00 0.00 0.00 4.96
912 1549 2.558359 CCACTCACTGATTTTTGACCCC 59.442 50.000 0.00 0.00 0.00 4.95
913 1550 3.486383 TCCACTCACTGATTTTTGACCC 58.514 45.455 0.00 0.00 0.00 4.46
931 1568 4.161295 CGGCGGCTCAAGGATCCA 62.161 66.667 15.82 0.00 0.00 3.41
956 1611 1.090052 GCTCGGGATTTTGACCTCGG 61.090 60.000 0.00 0.00 0.00 4.63
957 1612 1.421410 CGCTCGGGATTTTGACCTCG 61.421 60.000 0.00 0.00 0.00 4.63
1268 1938 5.627135 CTTCAACTTAGGGTTAGGGTTTCA 58.373 41.667 0.00 0.00 36.23 2.69
1287 1957 2.280797 GTCACCTGCCACGCTTCA 60.281 61.111 0.00 0.00 0.00 3.02
1288 1958 3.050275 GGTCACCTGCCACGCTTC 61.050 66.667 0.00 0.00 0.00 3.86
1289 1959 4.643387 GGGTCACCTGCCACGCTT 62.643 66.667 0.00 0.00 0.00 4.68
1405 2087 4.187694 GAGTTAATCTTGTCAGCCTCCAG 58.812 47.826 0.00 0.00 0.00 3.86
1483 2165 3.140814 GTCGGCAATGGGAAGGGC 61.141 66.667 0.00 0.00 0.00 5.19
1539 2221 7.383102 ACAACTCCAGTCAATTATTCATCAC 57.617 36.000 0.00 0.00 0.00 3.06
1598 2280 1.421485 CAAGATCAACAGCGACCGC 59.579 57.895 6.25 6.25 42.33 5.68
1607 2289 5.048782 TGTTACAGTTGCATCCAAGATCAAC 60.049 40.000 0.00 9.77 39.11 3.18
1611 2293 5.948162 AGAATGTTACAGTTGCATCCAAGAT 59.052 36.000 0.00 0.00 0.00 2.40
1641 2323 3.199508 ACAAGGCTAGTTCATCAGCTGAT 59.800 43.478 23.75 23.75 37.91 2.90
1644 2326 3.341823 CAACAAGGCTAGTTCATCAGCT 58.658 45.455 0.00 0.00 37.91 4.24
1735 2421 5.304614 GGGAGTACAATGCTAATGAGGAGTA 59.695 44.000 0.00 0.00 0.00 2.59
1796 2482 5.670792 TTTCAGTCCGTATGTACTCCAAT 57.329 39.130 0.00 0.00 0.00 3.16
1797 2483 5.186215 TCATTTCAGTCCGTATGTACTCCAA 59.814 40.000 0.00 0.00 0.00 3.53
1802 2488 5.647589 TCACTCATTTCAGTCCGTATGTAC 58.352 41.667 0.00 0.00 0.00 2.90
1883 2571 9.855021 ACAATACAAGGCAATGAAATTTAGTAC 57.145 29.630 0.00 0.00 31.22 2.73
1903 2591 6.515035 GCAGGCAAAATCCCACTATACAATAC 60.515 42.308 0.00 0.00 0.00 1.89
1958 2653 1.002033 CTGAACAACTGCACTCTTGGC 60.002 52.381 0.00 0.00 0.00 4.52
2004 2699 2.620115 AGATCAACAGCAACCAACACAG 59.380 45.455 0.00 0.00 0.00 3.66
2010 2705 3.305539 GCATTCAAGATCAACAGCAACCA 60.306 43.478 0.00 0.00 0.00 3.67
2057 2752 5.655532 AGCAAAAGAGCTAACATTCCATCAT 59.344 36.000 0.00 0.00 44.50 2.45
2087 2784 9.764363 AAGCCTTAAATTTAGAAACAAAAGGAG 57.236 29.630 13.77 0.00 35.34 3.69
2118 2815 9.698309 CCGTATGTAGTTCATATTGAAATCTCT 57.302 33.333 0.00 0.00 38.22 3.10
2119 2816 9.692749 TCCGTATGTAGTTCATATTGAAATCTC 57.307 33.333 0.00 0.00 38.22 2.75
2122 2819 9.778741 ACATCCGTATGTAGTTCATATTGAAAT 57.221 29.630 0.00 0.00 44.66 2.17
2146 2843 9.908152 CGACACTCCAAAATACATCTATATACA 57.092 33.333 0.00 0.00 0.00 2.29
2150 2847 9.692749 GAATCGACACTCCAAAATACATCTATA 57.307 33.333 0.00 0.00 0.00 1.31
2151 2848 8.204160 TGAATCGACACTCCAAAATACATCTAT 58.796 33.333 0.00 0.00 0.00 1.98
2152 2849 7.491372 GTGAATCGACACTCCAAAATACATCTA 59.509 37.037 0.00 0.00 37.73 1.98
2153 2850 6.313905 GTGAATCGACACTCCAAAATACATCT 59.686 38.462 0.00 0.00 37.73 2.90
2154 2851 6.313905 AGTGAATCGACACTCCAAAATACATC 59.686 38.462 2.98 0.00 46.36 3.06
2155 2852 6.173339 AGTGAATCGACACTCCAAAATACAT 58.827 36.000 2.98 0.00 46.36 2.29
2156 2853 5.547465 AGTGAATCGACACTCCAAAATACA 58.453 37.500 2.98 0.00 46.36 2.29
2167 2864 4.410492 AGCAAAATGAGTGAATCGACAC 57.590 40.909 0.00 0.00 40.60 3.67
2168 2865 6.149308 ACATTAGCAAAATGAGTGAATCGACA 59.851 34.615 16.16 0.00 0.00 4.35
2169 2866 6.546395 ACATTAGCAAAATGAGTGAATCGAC 58.454 36.000 16.16 0.00 0.00 4.20
2170 2867 6.741992 ACATTAGCAAAATGAGTGAATCGA 57.258 33.333 16.16 0.00 0.00 3.59
2171 2868 7.688372 ACTACATTAGCAAAATGAGTGAATCG 58.312 34.615 16.16 0.00 0.00 3.34
2172 2869 8.125448 GGACTACATTAGCAAAATGAGTGAATC 58.875 37.037 16.16 6.70 0.00 2.52
2173 2870 7.201644 CGGACTACATTAGCAAAATGAGTGAAT 60.202 37.037 16.16 0.00 0.00 2.57
2174 2871 6.092122 CGGACTACATTAGCAAAATGAGTGAA 59.908 38.462 16.16 0.00 0.00 3.18
2175 2872 5.580691 CGGACTACATTAGCAAAATGAGTGA 59.419 40.000 16.16 1.56 0.00 3.41
2176 2873 5.351465 ACGGACTACATTAGCAAAATGAGTG 59.649 40.000 16.16 9.12 0.00 3.51
2177 2874 5.488341 ACGGACTACATTAGCAAAATGAGT 58.512 37.500 16.16 13.97 0.00 3.41
2178 2875 7.715265 ATACGGACTACATTAGCAAAATGAG 57.285 36.000 16.16 11.70 0.00 2.90
2179 2876 7.766738 TCAATACGGACTACATTAGCAAAATGA 59.233 33.333 16.16 2.71 0.00 2.57
2180 2877 7.915508 TCAATACGGACTACATTAGCAAAATG 58.084 34.615 9.54 9.54 0.00 2.32
2181 2878 8.500753 TTCAATACGGACTACATTAGCAAAAT 57.499 30.769 0.00 0.00 0.00 1.82
2182 2879 7.908827 TTCAATACGGACTACATTAGCAAAA 57.091 32.000 0.00 0.00 0.00 2.44
2183 2880 7.908827 TTTCAATACGGACTACATTAGCAAA 57.091 32.000 0.00 0.00 0.00 3.68
2184 2881 7.985184 AGATTTCAATACGGACTACATTAGCAA 59.015 33.333 0.00 0.00 0.00 3.91
2185 2882 7.497595 AGATTTCAATACGGACTACATTAGCA 58.502 34.615 0.00 0.00 0.00 3.49
2186 2883 7.868415 AGAGATTTCAATACGGACTACATTAGC 59.132 37.037 0.00 0.00 0.00 3.09
2191 2888 9.932207 TTTTTAGAGATTTCAATACGGACTACA 57.068 29.630 0.00 0.00 0.00 2.74
2194 2891 9.449719 ACATTTTTAGAGATTTCAATACGGACT 57.550 29.630 0.00 0.00 0.00 3.85
2195 2892 9.704098 GACATTTTTAGAGATTTCAATACGGAC 57.296 33.333 0.00 0.00 0.00 4.79
2196 2893 9.667107 AGACATTTTTAGAGATTTCAATACGGA 57.333 29.630 0.00 0.00 0.00 4.69
2217 2914 9.584008 TCCGTTCCTAAATAGAGTATAAGACAT 57.416 33.333 0.00 0.00 0.00 3.06
2218 2915 8.985315 TCCGTTCCTAAATAGAGTATAAGACA 57.015 34.615 0.00 0.00 0.00 3.41
2219 2916 8.513774 CCTCCGTTCCTAAATAGAGTATAAGAC 58.486 40.741 0.00 0.00 0.00 3.01
2220 2917 7.668886 CCCTCCGTTCCTAAATAGAGTATAAGA 59.331 40.741 0.00 0.00 0.00 2.10
2221 2918 7.668886 TCCCTCCGTTCCTAAATAGAGTATAAG 59.331 40.741 0.00 0.00 0.00 1.73
2222 2919 7.529555 TCCCTCCGTTCCTAAATAGAGTATAA 58.470 38.462 0.00 0.00 0.00 0.98
2223 2920 7.095183 TCCCTCCGTTCCTAAATAGAGTATA 57.905 40.000 0.00 0.00 0.00 1.47
2224 2921 5.961897 TCCCTCCGTTCCTAAATAGAGTAT 58.038 41.667 0.00 0.00 0.00 2.12
2225 2922 5.103771 ACTCCCTCCGTTCCTAAATAGAGTA 60.104 44.000 0.00 0.00 0.00 2.59
2226 2923 4.216708 CTCCCTCCGTTCCTAAATAGAGT 58.783 47.826 0.00 0.00 0.00 3.24
2227 2924 4.216708 ACTCCCTCCGTTCCTAAATAGAG 58.783 47.826 0.00 0.00 0.00 2.43
2228 2925 4.261411 ACTCCCTCCGTTCCTAAATAGA 57.739 45.455 0.00 0.00 0.00 1.98
2229 2926 5.539193 ACATACTCCCTCCGTTCCTAAATAG 59.461 44.000 0.00 0.00 0.00 1.73
2230 2927 5.303589 CACATACTCCCTCCGTTCCTAAATA 59.696 44.000 0.00 0.00 0.00 1.40
2231 2928 4.101119 CACATACTCCCTCCGTTCCTAAAT 59.899 45.833 0.00 0.00 0.00 1.40
2232 2929 3.449737 CACATACTCCCTCCGTTCCTAAA 59.550 47.826 0.00 0.00 0.00 1.85
2233 2930 3.028850 CACATACTCCCTCCGTTCCTAA 58.971 50.000 0.00 0.00 0.00 2.69
2234 2931 2.662866 CACATACTCCCTCCGTTCCTA 58.337 52.381 0.00 0.00 0.00 2.94
2235 2932 1.486211 CACATACTCCCTCCGTTCCT 58.514 55.000 0.00 0.00 0.00 3.36
2236 2933 0.179081 GCACATACTCCCTCCGTTCC 60.179 60.000 0.00 0.00 0.00 3.62
2237 2934 0.535335 TGCACATACTCCCTCCGTTC 59.465 55.000 0.00 0.00 0.00 3.95
2238 2935 0.537188 CTGCACATACTCCCTCCGTT 59.463 55.000 0.00 0.00 0.00 4.44
2239 2936 0.324368 TCTGCACATACTCCCTCCGT 60.324 55.000 0.00 0.00 0.00 4.69
2240 2937 0.387202 CTCTGCACATACTCCCTCCG 59.613 60.000 0.00 0.00 0.00 4.63
2241 2938 1.410882 GACTCTGCACATACTCCCTCC 59.589 57.143 0.00 0.00 0.00 4.30
2242 2939 1.066303 CGACTCTGCACATACTCCCTC 59.934 57.143 0.00 0.00 0.00 4.30
2243 2940 1.107114 CGACTCTGCACATACTCCCT 58.893 55.000 0.00 0.00 0.00 4.20
2244 2941 0.528684 GCGACTCTGCACATACTCCC 60.529 60.000 0.00 0.00 34.15 4.30
2245 2942 0.457851 AGCGACTCTGCACATACTCC 59.542 55.000 0.00 0.00 37.31 3.85
2246 2943 1.133216 TCAGCGACTCTGCACATACTC 59.867 52.381 0.00 0.00 42.56 2.59
2247 2944 1.177401 TCAGCGACTCTGCACATACT 58.823 50.000 0.00 0.00 42.56 2.12
2248 2945 1.857217 CATCAGCGACTCTGCACATAC 59.143 52.381 0.00 0.00 42.56 2.39
2249 2946 1.750778 TCATCAGCGACTCTGCACATA 59.249 47.619 0.00 0.00 42.56 2.29
2250 2947 0.533951 TCATCAGCGACTCTGCACAT 59.466 50.000 0.00 0.00 42.56 3.21
2251 2948 0.318120 TTCATCAGCGACTCTGCACA 59.682 50.000 0.00 0.00 42.56 4.57
2252 2949 0.718343 GTTCATCAGCGACTCTGCAC 59.282 55.000 0.00 0.00 42.56 4.57
2265 2962 3.326747 AGTGTGCGGAGTAAAGTTCATC 58.673 45.455 0.00 0.00 0.00 2.92
2273 2970 3.537580 AGAAAACAAGTGTGCGGAGTAA 58.462 40.909 0.00 0.00 0.00 2.24
2274 2971 3.188159 AGAAAACAAGTGTGCGGAGTA 57.812 42.857 0.00 0.00 0.00 2.59
2275 2972 2.038387 AGAAAACAAGTGTGCGGAGT 57.962 45.000 0.00 0.00 0.00 3.85
2276 2973 2.097466 ACAAGAAAACAAGTGTGCGGAG 59.903 45.455 0.00 0.00 0.00 4.63
2277 2974 2.088423 ACAAGAAAACAAGTGTGCGGA 58.912 42.857 0.00 0.00 0.00 5.54
2278 2975 2.559998 ACAAGAAAACAAGTGTGCGG 57.440 45.000 0.00 0.00 0.00 5.69
2349 3056 3.273434 CTGCTACAATGCTAAAGAGGCA 58.727 45.455 0.00 0.00 44.05 4.75
2350 3057 2.032675 GCTGCTACAATGCTAAAGAGGC 59.967 50.000 0.00 0.00 0.00 4.70
2395 3109 9.052759 GTCAAGGAGAATTGTAAGTAGTTTTCA 57.947 33.333 0.00 0.00 0.00 2.69
2396 3110 8.504815 GGTCAAGGAGAATTGTAAGTAGTTTTC 58.495 37.037 0.00 0.00 0.00 2.29
2452 3178 6.331307 AGAGGGAATATCCTTACTGCAGAAAT 59.669 38.462 23.35 8.33 37.25 2.17
2472 3198 5.279156 GGGCATGCATTCTAAATAAAGAGGG 60.279 44.000 21.36 0.00 0.00 4.30
2522 3248 5.832060 TCCCACTATACAAGTAGAAGGCTAC 59.168 44.000 0.00 0.00 45.92 3.58
2524 3250 4.880164 TCCCACTATACAAGTAGAAGGCT 58.120 43.478 0.00 0.00 35.76 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.