Multiple sequence alignment - TraesCS7A01G178900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G178900 chr7A 100.000 2696 0 0 1 2696 133628467 133625772 0.000000e+00 4979.0
1 TraesCS7A01G178900 chr7A 98.907 183 2 0 570 752 13184455 13184273 7.200000e-86 327.0
2 TraesCS7A01G178900 chr7D 93.719 1433 55 20 757 2163 134467318 134465895 0.000000e+00 2115.0
3 TraesCS7A01G178900 chr7D 91.760 534 35 7 2162 2693 134465120 134464594 0.000000e+00 734.0
4 TraesCS7A01G178900 chr7D 96.226 106 4 0 478 583 134467414 134467309 9.920000e-40 174.0
5 TraesCS7A01G178900 chr7D 84.524 84 13 0 1 84 524308651 524308734 1.720000e-12 84.2
6 TraesCS7A01G178900 chr2B 82.332 1098 109 48 1016 2068 628157090 628158147 0.000000e+00 874.0
7 TraesCS7A01G178900 chr2B 92.243 593 37 2 756 1347 627322862 627323446 0.000000e+00 832.0
8 TraesCS7A01G178900 chr2B 92.101 595 36 4 756 1347 627317475 627318061 0.000000e+00 828.0
9 TraesCS7A01G178900 chr2B 92.034 590 35 5 762 1347 625239192 625238611 0.000000e+00 819.0
10 TraesCS7A01G178900 chr2B 84.603 604 57 19 771 1353 625009297 625008709 3.900000e-158 568.0
11 TraesCS7A01G178900 chr2B 90.909 418 34 3 1028 1444 225691691 225692105 2.340000e-155 558.0
12 TraesCS7A01G178900 chr2B 83.789 549 51 17 1387 1904 625261270 625260729 1.120000e-133 486.0
13 TraesCS7A01G178900 chr2B 84.524 84 12 1 1 84 652820424 652820342 6.190000e-12 82.4
14 TraesCS7A01G178900 chr2D 92.269 595 34 4 757 1347 528994465 528995051 0.000000e+00 833.0
15 TraesCS7A01G178900 chr2D 92.127 597 36 4 759 1353 527804814 527804227 0.000000e+00 832.0
16 TraesCS7A01G178900 chr2D 92.029 552 32 5 1028 1578 528998889 528999429 0.000000e+00 765.0
17 TraesCS7A01G178900 chr2D 90.714 420 36 3 1028 1444 171444842 171444423 8.430000e-155 556.0
18 TraesCS7A01G178900 chr2D 86.111 216 13 6 1576 1790 528999464 528999663 1.630000e-52 217.0
19 TraesCS7A01G178900 chr2A 88.119 707 57 13 755 1443 672746521 672745824 0.000000e+00 815.0
20 TraesCS7A01G178900 chr2A 87.960 706 58 13 756 1443 673417536 673418232 0.000000e+00 808.0
21 TraesCS7A01G178900 chr2A 91.225 604 34 7 755 1347 673419713 673420308 0.000000e+00 804.0
22 TraesCS7A01G178900 chr2A 91.727 556 36 6 1028 1578 673452136 673452686 0.000000e+00 763.0
23 TraesCS7A01G178900 chr2A 90.191 418 36 5 1028 1444 178171042 178171455 8.490000e-150 540.0
24 TraesCS7A01G178900 chr2A 88.235 255 19 6 1822 2068 673452914 673453165 7.300000e-76 294.0
25 TraesCS7A01G178900 chr2A 86.574 216 12 6 1576 1790 673452715 673452914 3.490000e-54 222.0
26 TraesCS7A01G178900 chr2A 84.466 103 11 4 1 102 751521205 751521107 2.210000e-16 97.1
27 TraesCS7A01G178900 chr2A 87.838 74 8 1 10 83 756923186 756923258 4.780000e-13 86.1
28 TraesCS7A01G178900 chr2A 82.353 68 7 5 642 707 211485019 211484955 1.000000e-03 54.7
29 TraesCS7A01G178900 chr7B 91.557 533 34 8 2162 2692 96601400 96600877 0.000000e+00 725.0
30 TraesCS7A01G178900 chr7B 84.337 83 13 0 1 83 35094940 35094858 6.190000e-12 82.4
31 TraesCS7A01G178900 chr5B 98.324 179 3 0 574 752 674428225 674428403 5.600000e-82 315.0
32 TraesCS7A01G178900 chr5A 98.324 179 1 2 574 752 51800691 51800867 2.020000e-81 313.0
33 TraesCS7A01G178900 chr5A 98.837 172 2 0 574 745 514187088 514186917 9.380000e-80 307.0
34 TraesCS7A01G178900 chr4B 97.765 179 4 0 573 751 430396366 430396544 2.610000e-80 309.0
35 TraesCS7A01G178900 chr1B 90.865 208 19 0 149 356 454359445 454359238 2.040000e-71 279.0
36 TraesCS7A01G178900 chr1B 96.528 144 5 0 609 752 580621946 580622089 3.470000e-59 239.0
37 TraesCS7A01G178900 chr1B 97.468 79 2 0 575 653 580621930 580621852 4.680000e-28 135.0
38 TraesCS7A01G178900 chr1B 88.095 84 10 0 1 84 101228282 101228199 1.710000e-17 100.0
39 TraesCS7A01G178900 chr3A 80.447 179 31 3 576 752 667493931 667493755 1.680000e-27 134.0
40 TraesCS7A01G178900 chr6B 90.411 73 7 0 2 74 674476426 674476498 2.210000e-16 97.1
41 TraesCS7A01G178900 chr1D 85.714 84 12 0 1 84 25950354 25950437 3.700000e-14 89.8
42 TraesCS7A01G178900 chr1A 97.959 49 1 0 704 752 468609980 468610028 4.780000e-13 86.1
43 TraesCS7A01G178900 chr6A 83.333 84 14 0 1 84 516398434 516398517 8.000000e-11 78.7
44 TraesCS7A01G178900 chr6D 100.000 29 0 0 641 669 463784976 463784948 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G178900 chr7A 133625772 133628467 2695 True 4979.000000 4979 100.000000 1 2696 1 chr7A.!!$R2 2695
1 TraesCS7A01G178900 chr7D 134464594 134467414 2820 True 1007.666667 2115 93.901667 478 2693 3 chr7D.!!$R1 2215
2 TraesCS7A01G178900 chr2B 628157090 628158147 1057 False 874.000000 874 82.332000 1016 2068 1 chr2B.!!$F4 1052
3 TraesCS7A01G178900 chr2B 627322862 627323446 584 False 832.000000 832 92.243000 756 1347 1 chr2B.!!$F3 591
4 TraesCS7A01G178900 chr2B 627317475 627318061 586 False 828.000000 828 92.101000 756 1347 1 chr2B.!!$F2 591
5 TraesCS7A01G178900 chr2B 625238611 625239192 581 True 819.000000 819 92.034000 762 1347 1 chr2B.!!$R2 585
6 TraesCS7A01G178900 chr2B 625008709 625009297 588 True 568.000000 568 84.603000 771 1353 1 chr2B.!!$R1 582
7 TraesCS7A01G178900 chr2B 625260729 625261270 541 True 486.000000 486 83.789000 1387 1904 1 chr2B.!!$R3 517
8 TraesCS7A01G178900 chr2D 527804227 527804814 587 True 832.000000 832 92.127000 759 1353 1 chr2D.!!$R2 594
9 TraesCS7A01G178900 chr2D 528994465 528999663 5198 False 605.000000 833 90.136333 757 1790 3 chr2D.!!$F1 1033
10 TraesCS7A01G178900 chr2A 672745824 672746521 697 True 815.000000 815 88.119000 755 1443 1 chr2A.!!$R2 688
11 TraesCS7A01G178900 chr2A 673417536 673420308 2772 False 806.000000 808 89.592500 755 1443 2 chr2A.!!$F3 688
12 TraesCS7A01G178900 chr2A 673452136 673453165 1029 False 426.333333 763 88.845333 1028 2068 3 chr2A.!!$F4 1040
13 TraesCS7A01G178900 chr7B 96600877 96601400 523 True 725.000000 725 91.557000 2162 2692 1 chr7B.!!$R2 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
646 647 0.03918 CCCTAACCAAACACCCTCCC 59.961 60.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1859 8337 1.00408 GCAGACTGCAGAGCCTCAA 60.004 57.895 23.35 0.0 44.26 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.998668 GACGCGATGAATTCAACGAT 57.001 45.000 33.76 23.19 43.47 3.73
20 21 2.618419 GACGCGATGAATTCAACGATG 58.382 47.619 33.76 26.77 43.47 3.84
21 22 2.267426 ACGCGATGAATTCAACGATGA 58.733 42.857 33.76 2.12 43.47 2.92
35 36 7.988904 TTCAACGATGAAAACGGTTTAAAAT 57.011 28.000 5.55 1.29 42.47 1.82
36 37 7.988904 TCAACGATGAAAACGGTTTAAAATT 57.011 28.000 6.53 0.00 35.94 1.82
37 38 8.408743 TCAACGATGAAAACGGTTTAAAATTT 57.591 26.923 6.53 0.00 35.94 1.82
38 39 8.321716 TCAACGATGAAAACGGTTTAAAATTTG 58.678 29.630 6.53 0.63 35.94 2.32
39 40 7.988904 ACGATGAAAACGGTTTAAAATTTGA 57.011 28.000 6.53 0.00 35.94 2.69
40 41 8.408743 ACGATGAAAACGGTTTAAAATTTGAA 57.591 26.923 6.53 0.00 35.94 2.69
41 42 8.322428 ACGATGAAAACGGTTTAAAATTTGAAC 58.678 29.630 6.53 4.99 35.94 3.18
42 43 7.521244 CGATGAAAACGGTTTAAAATTTGAACG 59.479 33.333 6.53 4.06 0.00 3.95
43 44 6.467648 TGAAAACGGTTTAAAATTTGAACGC 58.532 32.000 6.53 1.12 0.00 4.84
44 45 6.090358 TGAAAACGGTTTAAAATTTGAACGCA 59.910 30.769 6.53 0.00 0.00 5.24
45 46 6.591313 AAACGGTTTAAAATTTGAACGCAT 57.409 29.167 3.90 0.00 0.00 4.73
46 47 5.568747 ACGGTTTAAAATTTGAACGCATG 57.431 34.783 7.18 0.00 0.00 4.06
47 48 5.282510 ACGGTTTAAAATTTGAACGCATGA 58.717 33.333 7.18 0.00 0.00 3.07
48 49 5.923684 ACGGTTTAAAATTTGAACGCATGAT 59.076 32.000 7.18 0.00 0.00 2.45
49 50 6.422400 ACGGTTTAAAATTTGAACGCATGATT 59.578 30.769 7.18 0.00 0.00 2.57
50 51 7.042389 ACGGTTTAAAATTTGAACGCATGATTT 60.042 29.630 7.18 0.00 0.00 2.17
51 52 8.428536 CGGTTTAAAATTTGAACGCATGATTTA 58.571 29.630 7.18 0.00 0.00 1.40
57 58 9.643693 AAAATTTGAACGCATGATTTAAGAGAT 57.356 25.926 0.00 0.00 0.00 2.75
63 64 9.720667 TGAACGCATGATTTAAGAGATAAAATG 57.279 29.630 0.00 0.00 37.06 2.32
64 65 9.722056 GAACGCATGATTTAAGAGATAAAATGT 57.278 29.630 0.00 0.00 37.06 2.71
124 125 5.659048 AAAAACTCTACTTGCGAGAAGTG 57.341 39.130 8.31 0.00 32.87 3.16
125 126 3.305398 AACTCTACTTGCGAGAAGTGG 57.695 47.619 8.31 0.00 32.87 4.00
126 127 2.240279 ACTCTACTTGCGAGAAGTGGT 58.760 47.619 8.31 0.00 31.68 4.16
127 128 2.029828 ACTCTACTTGCGAGAAGTGGTG 60.030 50.000 8.31 3.81 31.68 4.17
128 129 1.071605 CTACTTGCGAGAAGTGGTGC 58.928 55.000 8.31 0.00 0.00 5.01
129 130 0.391228 TACTTGCGAGAAGTGGTGCA 59.609 50.000 8.31 0.00 35.15 4.57
130 131 1.160329 ACTTGCGAGAAGTGGTGCAC 61.160 55.000 8.80 8.80 37.01 4.57
131 132 2.162921 CTTGCGAGAAGTGGTGCACG 62.163 60.000 11.45 0.00 39.64 5.34
132 133 2.661866 GCGAGAAGTGGTGCACGT 60.662 61.111 11.45 0.00 39.64 4.49
133 134 2.943345 GCGAGAAGTGGTGCACGTG 61.943 63.158 12.28 12.28 39.64 4.49
134 135 2.939022 GAGAAGTGGTGCACGTGC 59.061 61.111 33.11 33.11 39.64 5.34
148 149 4.728058 GTGCAACACGCCACAAAT 57.272 50.000 0.00 0.00 41.33 2.32
149 150 2.215295 GTGCAACACGCCACAAATG 58.785 52.632 0.00 0.00 41.33 2.32
150 151 1.591059 TGCAACACGCCACAAATGC 60.591 52.632 0.00 0.00 41.33 3.56
151 152 1.591059 GCAACACGCCACAAATGCA 60.591 52.632 0.00 0.00 34.10 3.96
152 153 1.820233 GCAACACGCCACAAATGCAC 61.820 55.000 0.00 0.00 34.10 4.57
153 154 0.248990 CAACACGCCACAAATGCACT 60.249 50.000 0.00 0.00 0.00 4.40
154 155 0.248990 AACACGCCACAAATGCACTG 60.249 50.000 0.00 0.00 0.00 3.66
155 156 1.100463 ACACGCCACAAATGCACTGA 61.100 50.000 4.68 0.00 0.00 3.41
156 157 0.661187 CACGCCACAAATGCACTGAC 60.661 55.000 4.68 0.00 0.00 3.51
157 158 1.081242 CGCCACAAATGCACTGACC 60.081 57.895 4.68 0.00 0.00 4.02
158 159 1.518056 CGCCACAAATGCACTGACCT 61.518 55.000 4.68 0.00 0.00 3.85
159 160 0.675633 GCCACAAATGCACTGACCTT 59.324 50.000 4.68 0.00 0.00 3.50
160 161 1.603678 GCCACAAATGCACTGACCTTG 60.604 52.381 4.68 0.00 0.00 3.61
161 162 1.000060 CCACAAATGCACTGACCTTGG 60.000 52.381 4.68 0.00 0.00 3.61
162 163 1.000060 CACAAATGCACTGACCTTGGG 60.000 52.381 4.68 0.00 0.00 4.12
163 164 1.331214 CAAATGCACTGACCTTGGGT 58.669 50.000 0.00 0.00 39.44 4.51
171 172 2.032071 GACCTTGGGTCGTGTGGG 59.968 66.667 0.74 0.00 43.14 4.61
172 173 4.265056 ACCTTGGGTCGTGTGGGC 62.265 66.667 0.00 0.00 0.00 5.36
182 183 4.101790 GTGTGGGCGGCGATGTTG 62.102 66.667 12.98 0.00 0.00 3.33
193 194 3.876300 GATGTTGCCGTCGAAGCT 58.124 55.556 9.82 0.00 0.00 3.74
194 195 1.421485 GATGTTGCCGTCGAAGCTG 59.579 57.895 9.82 0.00 0.00 4.24
195 196 1.970917 GATGTTGCCGTCGAAGCTGG 61.971 60.000 9.82 0.58 0.00 4.85
196 197 2.665185 GTTGCCGTCGAAGCTGGT 60.665 61.111 9.82 0.00 0.00 4.00
197 198 2.357034 TTGCCGTCGAAGCTGGTC 60.357 61.111 9.82 0.00 0.00 4.02
198 199 4.717629 TGCCGTCGAAGCTGGTCG 62.718 66.667 9.82 1.24 42.48 4.79
199 200 4.719369 GCCGTCGAAGCTGGTCGT 62.719 66.667 7.63 0.00 41.80 4.34
200 201 2.504244 CCGTCGAAGCTGGTCGTC 60.504 66.667 7.63 1.78 41.80 4.20
201 202 2.870161 CGTCGAAGCTGGTCGTCG 60.870 66.667 11.77 11.77 45.80 5.12
202 203 2.254651 GTCGAAGCTGGTCGTCGT 59.745 61.111 7.63 0.00 44.93 4.34
203 204 1.796749 GTCGAAGCTGGTCGTCGTC 60.797 63.158 7.63 0.00 44.93 4.20
204 205 2.254350 CGAAGCTGGTCGTCGTCA 59.746 61.111 0.00 0.00 40.86 4.35
205 206 1.154016 CGAAGCTGGTCGTCGTCAT 60.154 57.895 0.00 0.00 40.86 3.06
206 207 1.406219 CGAAGCTGGTCGTCGTCATG 61.406 60.000 0.00 0.00 40.86 3.07
207 208 0.388649 GAAGCTGGTCGTCGTCATGT 60.389 55.000 0.00 0.00 0.00 3.21
208 209 0.388649 AAGCTGGTCGTCGTCATGTC 60.389 55.000 0.00 0.00 0.00 3.06
209 210 2.152699 GCTGGTCGTCGTCATGTCG 61.153 63.158 5.98 5.98 0.00 4.35
210 211 1.209383 CTGGTCGTCGTCATGTCGT 59.791 57.895 11.96 0.00 0.00 4.34
211 212 0.793478 CTGGTCGTCGTCATGTCGTC 60.793 60.000 11.96 5.93 0.00 4.20
212 213 1.232621 TGGTCGTCGTCATGTCGTCT 61.233 55.000 11.96 0.00 0.00 4.18
213 214 0.723414 GGTCGTCGTCATGTCGTCTA 59.277 55.000 11.96 0.00 0.00 2.59
214 215 1.528603 GGTCGTCGTCATGTCGTCTAC 60.529 57.143 11.96 8.59 0.00 2.59
215 216 0.367887 TCGTCGTCATGTCGTCTACG 59.632 55.000 15.24 15.24 41.45 3.51
225 226 1.643292 TCGTCTACGATAACCGGCG 59.357 57.895 0.00 0.00 44.22 6.46
226 227 2.007641 CGTCTACGATAACCGGCGC 61.008 63.158 0.00 0.00 43.93 6.53
227 228 1.358046 GTCTACGATAACCGGCGCT 59.642 57.895 7.64 0.00 43.93 5.92
228 229 0.248784 GTCTACGATAACCGGCGCTT 60.249 55.000 7.64 0.00 43.93 4.68
229 230 0.457035 TCTACGATAACCGGCGCTTT 59.543 50.000 7.64 0.00 43.93 3.51
230 231 0.575390 CTACGATAACCGGCGCTTTG 59.425 55.000 7.64 0.00 43.93 2.77
231 232 1.422950 TACGATAACCGGCGCTTTGC 61.423 55.000 7.64 0.00 43.93 3.68
232 233 2.461110 CGATAACCGGCGCTTTGCT 61.461 57.895 7.64 0.00 45.43 3.91
233 234 1.800681 GATAACCGGCGCTTTGCTT 59.199 52.632 7.64 0.00 45.43 3.91
234 235 0.523335 GATAACCGGCGCTTTGCTTG 60.523 55.000 7.64 0.00 45.43 4.01
235 236 1.241315 ATAACCGGCGCTTTGCTTGT 61.241 50.000 7.64 0.00 45.43 3.16
236 237 2.123988 TAACCGGCGCTTTGCTTGTG 62.124 55.000 7.64 0.00 45.43 3.33
237 238 4.705519 CCGGCGCTTTGCTTGTGG 62.706 66.667 7.64 0.00 45.43 4.17
238 239 4.705519 CGGCGCTTTGCTTGTGGG 62.706 66.667 7.64 0.00 45.43 4.61
239 240 3.605664 GGCGCTTTGCTTGTGGGT 61.606 61.111 7.64 0.00 45.43 4.51
240 241 2.355009 GCGCTTTGCTTGTGGGTG 60.355 61.111 0.00 0.00 41.73 4.61
241 242 2.336088 CGCTTTGCTTGTGGGTGG 59.664 61.111 0.00 0.00 0.00 4.61
242 243 2.489275 CGCTTTGCTTGTGGGTGGT 61.489 57.895 0.00 0.00 0.00 4.16
243 244 1.822615 GCTTTGCTTGTGGGTGGTT 59.177 52.632 0.00 0.00 0.00 3.67
244 245 0.530431 GCTTTGCTTGTGGGTGGTTG 60.530 55.000 0.00 0.00 0.00 3.77
245 246 0.530431 CTTTGCTTGTGGGTGGTTGC 60.530 55.000 0.00 0.00 0.00 4.17
246 247 1.965754 TTTGCTTGTGGGTGGTTGCC 61.966 55.000 0.00 0.00 0.00 4.52
247 248 2.521708 GCTTGTGGGTGGTTGCCT 60.522 61.111 0.00 0.00 0.00 4.75
248 249 2.564721 GCTTGTGGGTGGTTGCCTC 61.565 63.158 0.00 0.00 0.00 4.70
249 250 1.151450 CTTGTGGGTGGTTGCCTCT 59.849 57.895 0.00 0.00 0.00 3.69
250 251 0.468029 CTTGTGGGTGGTTGCCTCTT 60.468 55.000 0.00 0.00 0.00 2.85
251 252 0.467290 TTGTGGGTGGTTGCCTCTTC 60.467 55.000 0.00 0.00 0.00 2.87
252 253 1.150536 GTGGGTGGTTGCCTCTTCA 59.849 57.895 0.00 0.00 0.00 3.02
253 254 1.150536 TGGGTGGTTGCCTCTTCAC 59.849 57.895 0.00 0.00 0.00 3.18
254 255 1.603739 GGGTGGTTGCCTCTTCACC 60.604 63.158 0.00 0.00 46.41 4.02
255 256 1.456287 GGTGGTTGCCTCTTCACCT 59.544 57.895 0.00 0.00 44.43 4.00
256 257 0.606673 GGTGGTTGCCTCTTCACCTC 60.607 60.000 0.00 0.00 44.43 3.85
257 258 0.398318 GTGGTTGCCTCTTCACCTCT 59.602 55.000 0.00 0.00 0.00 3.69
258 259 0.397941 TGGTTGCCTCTTCACCTCTG 59.602 55.000 0.00 0.00 0.00 3.35
259 260 0.957888 GGTTGCCTCTTCACCTCTGC 60.958 60.000 0.00 0.00 0.00 4.26
260 261 1.004560 TTGCCTCTTCACCTCTGCG 60.005 57.895 0.00 0.00 0.00 5.18
261 262 2.125350 GCCTCTTCACCTCTGCGG 60.125 66.667 0.00 0.00 39.35 5.69
262 263 2.581354 CCTCTTCACCTCTGCGGG 59.419 66.667 0.00 0.00 36.97 6.13
263 264 1.984570 CCTCTTCACCTCTGCGGGA 60.985 63.158 0.00 0.00 36.97 5.14
264 265 1.515020 CTCTTCACCTCTGCGGGAG 59.485 63.158 0.00 0.00 41.51 4.30
265 266 0.967887 CTCTTCACCTCTGCGGGAGA 60.968 60.000 7.90 0.00 44.45 3.71
267 268 1.228894 TTCACCTCTGCGGGAGAGT 60.229 57.895 22.62 10.06 46.30 3.24
268 269 1.251527 TTCACCTCTGCGGGAGAGTC 61.252 60.000 22.62 0.00 46.30 3.36
269 270 2.363147 ACCTCTGCGGGAGAGTCC 60.363 66.667 22.62 0.00 46.30 3.85
278 279 2.363147 GGAGAGTCCCGGTCTGCT 60.363 66.667 0.00 0.00 30.13 4.24
279 280 2.419739 GGAGAGTCCCGGTCTGCTC 61.420 68.421 0.00 1.71 30.13 4.26
280 281 2.363147 AGAGTCCCGGTCTGCTCC 60.363 66.667 0.00 0.00 0.00 4.70
281 282 2.363147 GAGTCCCGGTCTGCTCCT 60.363 66.667 0.00 0.00 0.00 3.69
282 283 2.363147 AGTCCCGGTCTGCTCCTC 60.363 66.667 0.00 0.00 0.00 3.71
283 284 3.462678 GTCCCGGTCTGCTCCTCC 61.463 72.222 0.00 0.00 0.00 4.30
284 285 4.779733 TCCCGGTCTGCTCCTCCC 62.780 72.222 0.00 0.00 0.00 4.30
286 287 2.765807 CCGGTCTGCTCCTCCCAT 60.766 66.667 0.00 0.00 0.00 4.00
287 288 2.370445 CCGGTCTGCTCCTCCCATT 61.370 63.158 0.00 0.00 0.00 3.16
288 289 1.153289 CGGTCTGCTCCTCCCATTG 60.153 63.158 0.00 0.00 0.00 2.82
289 290 1.452833 GGTCTGCTCCTCCCATTGC 60.453 63.158 0.00 0.00 0.00 3.56
290 291 1.300963 GTCTGCTCCTCCCATTGCA 59.699 57.895 0.00 0.00 0.00 4.08
291 292 4.237445 CTGCTCCTCCCATTGCAG 57.763 61.111 0.00 0.00 45.15 4.41
292 293 1.302285 CTGCTCCTCCCATTGCAGT 59.698 57.895 0.00 0.00 45.31 4.40
293 294 0.747283 CTGCTCCTCCCATTGCAGTC 60.747 60.000 0.00 0.00 45.31 3.51
294 295 1.203441 TGCTCCTCCCATTGCAGTCT 61.203 55.000 0.00 0.00 0.00 3.24
295 296 0.463474 GCTCCTCCCATTGCAGTCTC 60.463 60.000 0.00 0.00 0.00 3.36
296 297 0.179089 CTCCTCCCATTGCAGTCTCG 60.179 60.000 0.00 0.00 0.00 4.04
297 298 0.614697 TCCTCCCATTGCAGTCTCGA 60.615 55.000 0.00 0.00 0.00 4.04
298 299 0.460987 CCTCCCATTGCAGTCTCGAC 60.461 60.000 0.00 0.00 0.00 4.20
299 300 0.534412 CTCCCATTGCAGTCTCGACT 59.466 55.000 0.00 0.00 43.61 4.18
300 301 0.976641 TCCCATTGCAGTCTCGACTT 59.023 50.000 0.00 0.00 40.20 3.01
301 302 1.066858 TCCCATTGCAGTCTCGACTTC 60.067 52.381 0.00 0.00 40.20 3.01
302 303 1.066573 CCCATTGCAGTCTCGACTTCT 60.067 52.381 0.00 0.00 40.20 2.85
303 304 2.613977 CCCATTGCAGTCTCGACTTCTT 60.614 50.000 0.00 0.00 40.20 2.52
304 305 2.670414 CCATTGCAGTCTCGACTTCTTC 59.330 50.000 0.00 0.00 40.20 2.87
305 306 3.583806 CATTGCAGTCTCGACTTCTTCT 58.416 45.455 0.00 0.00 40.20 2.85
306 307 3.735237 TTGCAGTCTCGACTTCTTCTT 57.265 42.857 0.00 0.00 40.20 2.52
307 308 3.735237 TGCAGTCTCGACTTCTTCTTT 57.265 42.857 0.00 0.00 40.20 2.52
308 309 3.643763 TGCAGTCTCGACTTCTTCTTTC 58.356 45.455 0.00 0.00 40.20 2.62
309 310 2.990514 GCAGTCTCGACTTCTTCTTTCC 59.009 50.000 0.00 0.00 40.20 3.13
310 311 3.553096 GCAGTCTCGACTTCTTCTTTCCA 60.553 47.826 0.00 0.00 40.20 3.53
311 312 4.233789 CAGTCTCGACTTCTTCTTTCCAG 58.766 47.826 0.00 0.00 40.20 3.86
312 313 2.990514 GTCTCGACTTCTTCTTTCCAGC 59.009 50.000 0.00 0.00 0.00 4.85
313 314 2.628178 TCTCGACTTCTTCTTTCCAGCA 59.372 45.455 0.00 0.00 0.00 4.41
314 315 2.992543 CTCGACTTCTTCTTTCCAGCAG 59.007 50.000 0.00 0.00 0.00 4.24
315 316 2.365617 TCGACTTCTTCTTTCCAGCAGT 59.634 45.455 0.00 0.00 0.00 4.40
316 317 2.478134 CGACTTCTTCTTTCCAGCAGTG 59.522 50.000 0.00 0.00 0.00 3.66
317 318 2.810852 GACTTCTTCTTTCCAGCAGTGG 59.189 50.000 0.00 0.00 46.63 4.00
318 319 2.173569 ACTTCTTCTTTCCAGCAGTGGT 59.826 45.455 0.00 0.00 45.28 4.16
319 320 2.260844 TCTTCTTTCCAGCAGTGGTG 57.739 50.000 15.49 15.49 45.28 4.17
325 326 2.348998 CCAGCAGTGGTGGGAGAC 59.651 66.667 30.04 0.00 46.19 3.36
326 327 2.519622 CCAGCAGTGGTGGGAGACA 61.520 63.158 30.04 0.00 46.19 3.41
327 328 1.004080 CAGCAGTGGTGGGAGACAG 60.004 63.158 14.66 0.00 0.00 3.51
328 329 2.219875 AGCAGTGGTGGGAGACAGG 61.220 63.158 0.00 0.00 0.00 4.00
329 330 2.348998 CAGTGGTGGGAGACAGGC 59.651 66.667 0.00 0.00 0.00 4.85
330 331 2.205462 AGTGGTGGGAGACAGGCT 59.795 61.111 0.00 0.00 0.00 4.58
331 332 0.904865 CAGTGGTGGGAGACAGGCTA 60.905 60.000 0.00 0.00 0.00 3.93
332 333 0.616111 AGTGGTGGGAGACAGGCTAG 60.616 60.000 0.00 0.00 0.00 3.42
333 334 1.990060 TGGTGGGAGACAGGCTAGC 60.990 63.158 6.04 6.04 0.00 3.42
334 335 1.687493 GGTGGGAGACAGGCTAGCT 60.687 63.158 15.72 0.00 0.00 3.32
335 336 1.681486 GGTGGGAGACAGGCTAGCTC 61.681 65.000 15.72 4.36 0.00 4.09
336 337 1.754621 TGGGAGACAGGCTAGCTCG 60.755 63.158 15.72 8.52 0.00 5.03
337 338 2.494530 GGGAGACAGGCTAGCTCGG 61.495 68.421 15.72 8.15 0.00 4.63
338 339 2.415426 GAGACAGGCTAGCTCGGC 59.585 66.667 15.72 8.22 0.00 5.54
339 340 3.477224 GAGACAGGCTAGCTCGGCG 62.477 68.421 15.72 0.00 34.19 6.46
340 341 4.577246 GACAGGCTAGCTCGGCGG 62.577 72.222 15.72 10.14 34.19 6.13
342 343 4.277593 CAGGCTAGCTCGGCGGAG 62.278 72.222 15.72 16.48 43.46 4.63
361 362 3.728373 GGGGCTTCCCGTGGACAT 61.728 66.667 0.00 0.00 46.66 3.06
362 363 2.438434 GGGCTTCCCGTGGACATG 60.438 66.667 0.00 0.00 32.13 3.21
363 364 2.351276 GGCTTCCCGTGGACATGT 59.649 61.111 0.00 0.00 0.00 3.21
364 365 1.600107 GGCTTCCCGTGGACATGTA 59.400 57.895 0.00 0.00 0.00 2.29
365 366 0.180406 GGCTTCCCGTGGACATGTAT 59.820 55.000 0.00 0.00 0.00 2.29
366 367 1.408266 GGCTTCCCGTGGACATGTATT 60.408 52.381 0.00 0.00 0.00 1.89
367 368 2.365582 GCTTCCCGTGGACATGTATTT 58.634 47.619 0.00 0.00 0.00 1.40
368 369 2.097466 GCTTCCCGTGGACATGTATTTG 59.903 50.000 0.00 0.00 0.00 2.32
369 370 2.411628 TCCCGTGGACATGTATTTGG 57.588 50.000 0.00 0.00 0.00 3.28
370 371 1.631388 TCCCGTGGACATGTATTTGGT 59.369 47.619 0.00 0.00 0.00 3.67
371 372 2.040545 TCCCGTGGACATGTATTTGGTT 59.959 45.455 0.00 0.00 0.00 3.67
372 373 2.823154 CCCGTGGACATGTATTTGGTTT 59.177 45.455 0.00 0.00 0.00 3.27
373 374 3.257127 CCCGTGGACATGTATTTGGTTTT 59.743 43.478 0.00 0.00 0.00 2.43
374 375 4.481463 CCGTGGACATGTATTTGGTTTTC 58.519 43.478 0.00 0.00 0.00 2.29
375 376 4.155449 CGTGGACATGTATTTGGTTTTCG 58.845 43.478 0.00 0.00 0.00 3.46
376 377 3.917985 GTGGACATGTATTTGGTTTTCGC 59.082 43.478 0.00 0.00 0.00 4.70
377 378 3.057174 TGGACATGTATTTGGTTTTCGCC 60.057 43.478 0.00 0.00 0.00 5.54
378 379 3.192633 GGACATGTATTTGGTTTTCGCCT 59.807 43.478 0.00 0.00 0.00 5.52
379 380 4.165779 GACATGTATTTGGTTTTCGCCTG 58.834 43.478 0.00 0.00 0.00 4.85
380 381 3.056891 ACATGTATTTGGTTTTCGCCTGG 60.057 43.478 0.00 0.00 0.00 4.45
381 382 2.588620 TGTATTTGGTTTTCGCCTGGT 58.411 42.857 0.00 0.00 0.00 4.00
382 383 2.959707 TGTATTTGGTTTTCGCCTGGTT 59.040 40.909 0.00 0.00 0.00 3.67
383 384 3.385111 TGTATTTGGTTTTCGCCTGGTTT 59.615 39.130 0.00 0.00 0.00 3.27
384 385 3.552132 ATTTGGTTTTCGCCTGGTTTT 57.448 38.095 0.00 0.00 0.00 2.43
385 386 3.336138 TTTGGTTTTCGCCTGGTTTTT 57.664 38.095 0.00 0.00 0.00 1.94
386 387 2.588027 TGGTTTTCGCCTGGTTTTTC 57.412 45.000 0.00 0.00 0.00 2.29
387 388 1.137282 TGGTTTTCGCCTGGTTTTTCC 59.863 47.619 0.00 0.00 0.00 3.13
388 389 1.411246 GGTTTTCGCCTGGTTTTTCCT 59.589 47.619 0.00 0.00 37.07 3.36
389 390 2.624364 GGTTTTCGCCTGGTTTTTCCTA 59.376 45.455 0.00 0.00 37.07 2.94
390 391 3.068448 GGTTTTCGCCTGGTTTTTCCTAA 59.932 43.478 0.00 0.00 37.07 2.69
391 392 4.262292 GGTTTTCGCCTGGTTTTTCCTAAT 60.262 41.667 0.00 0.00 37.07 1.73
392 393 5.294356 GTTTTCGCCTGGTTTTTCCTAATT 58.706 37.500 0.00 0.00 37.07 1.40
393 394 6.448852 GTTTTCGCCTGGTTTTTCCTAATTA 58.551 36.000 0.00 0.00 37.07 1.40
394 395 6.651975 TTTCGCCTGGTTTTTCCTAATTAA 57.348 33.333 0.00 0.00 37.07 1.40
395 396 5.632244 TCGCCTGGTTTTTCCTAATTAAC 57.368 39.130 0.00 0.00 37.07 2.01
396 397 4.460034 TCGCCTGGTTTTTCCTAATTAACC 59.540 41.667 0.00 0.00 40.31 2.85
397 398 4.673320 CGCCTGGTTTTTCCTAATTAACCG 60.673 45.833 0.00 0.00 42.29 4.44
398 399 4.460034 GCCTGGTTTTTCCTAATTAACCGA 59.540 41.667 0.00 0.00 42.29 4.69
399 400 5.392703 GCCTGGTTTTTCCTAATTAACCGAG 60.393 44.000 0.00 0.00 42.29 4.63
400 401 5.392703 CCTGGTTTTTCCTAATTAACCGAGC 60.393 44.000 0.00 0.00 42.29 5.03
401 402 5.071370 TGGTTTTTCCTAATTAACCGAGCA 58.929 37.500 0.00 0.00 42.29 4.26
402 403 5.535406 TGGTTTTTCCTAATTAACCGAGCAA 59.465 36.000 0.00 0.00 42.29 3.91
403 404 5.860182 GGTTTTTCCTAATTAACCGAGCAAC 59.140 40.000 0.00 0.00 31.64 4.17
404 405 6.294342 GGTTTTTCCTAATTAACCGAGCAACT 60.294 38.462 0.00 0.00 31.64 3.16
405 406 7.094677 GGTTTTTCCTAATTAACCGAGCAACTA 60.095 37.037 0.00 0.00 31.64 2.24
406 407 8.456471 GTTTTTCCTAATTAACCGAGCAACTAT 58.544 33.333 0.00 0.00 0.00 2.12
407 408 8.570068 TTTTCCTAATTAACCGAGCAACTATT 57.430 30.769 0.00 0.00 0.00 1.73
408 409 8.570068 TTTCCTAATTAACCGAGCAACTATTT 57.430 30.769 0.00 0.00 0.00 1.40
409 410 8.570068 TTCCTAATTAACCGAGCAACTATTTT 57.430 30.769 0.00 0.00 0.00 1.82
410 411 8.205131 TCCTAATTAACCGAGCAACTATTTTC 57.795 34.615 0.00 0.00 0.00 2.29
411 412 8.044908 TCCTAATTAACCGAGCAACTATTTTCT 58.955 33.333 0.00 0.00 0.00 2.52
412 413 8.674607 CCTAATTAACCGAGCAACTATTTTCTT 58.325 33.333 0.00 0.00 0.00 2.52
413 414 9.704098 CTAATTAACCGAGCAACTATTTTCTTC 57.296 33.333 0.00 0.00 0.00 2.87
414 415 7.923414 ATTAACCGAGCAACTATTTTCTTCT 57.077 32.000 0.00 0.00 0.00 2.85
415 416 7.739498 TTAACCGAGCAACTATTTTCTTCTT 57.261 32.000 0.00 0.00 0.00 2.52
416 417 8.836268 TTAACCGAGCAACTATTTTCTTCTTA 57.164 30.769 0.00 0.00 0.00 2.10
417 418 7.739498 AACCGAGCAACTATTTTCTTCTTAA 57.261 32.000 0.00 0.00 0.00 1.85
418 419 7.923414 ACCGAGCAACTATTTTCTTCTTAAT 57.077 32.000 0.00 0.00 0.00 1.40
419 420 9.444600 AACCGAGCAACTATTTTCTTCTTAATA 57.555 29.630 0.00 0.00 0.00 0.98
420 421 9.444600 ACCGAGCAACTATTTTCTTCTTAATAA 57.555 29.630 0.00 0.00 0.00 1.40
446 447 6.219302 CAGTAAGCTGCCATTTTGAAAAAG 57.781 37.500 0.00 0.00 35.77 2.27
447 448 5.984926 CAGTAAGCTGCCATTTTGAAAAAGA 59.015 36.000 0.00 0.00 35.77 2.52
448 449 5.985530 AGTAAGCTGCCATTTTGAAAAAGAC 59.014 36.000 0.00 0.00 0.00 3.01
449 450 4.405116 AGCTGCCATTTTGAAAAAGACA 57.595 36.364 0.00 0.00 0.00 3.41
450 451 4.768583 AGCTGCCATTTTGAAAAAGACAA 58.231 34.783 0.00 0.00 0.00 3.18
451 452 4.812626 AGCTGCCATTTTGAAAAAGACAAG 59.187 37.500 0.00 0.00 0.00 3.16
452 453 4.553351 GCTGCCATTTTGAAAAAGACAAGC 60.553 41.667 0.00 0.00 0.00 4.01
453 454 3.555139 TGCCATTTTGAAAAAGACAAGCG 59.445 39.130 0.00 0.00 0.00 4.68
454 455 3.801594 GCCATTTTGAAAAAGACAAGCGA 59.198 39.130 0.00 0.00 0.00 4.93
455 456 4.448732 GCCATTTTGAAAAAGACAAGCGAT 59.551 37.500 0.00 0.00 0.00 4.58
456 457 5.050159 GCCATTTTGAAAAAGACAAGCGATT 60.050 36.000 0.00 0.00 0.00 3.34
457 458 6.145371 GCCATTTTGAAAAAGACAAGCGATTA 59.855 34.615 0.00 0.00 0.00 1.75
458 459 7.148590 GCCATTTTGAAAAAGACAAGCGATTAT 60.149 33.333 0.00 0.00 0.00 1.28
459 460 8.164153 CCATTTTGAAAAAGACAAGCGATTATG 58.836 33.333 0.00 0.00 0.00 1.90
460 461 8.914654 CATTTTGAAAAAGACAAGCGATTATGA 58.085 29.630 0.00 0.00 0.00 2.15
461 462 7.851822 TTTGAAAAAGACAAGCGATTATGAC 57.148 32.000 0.00 0.00 0.00 3.06
462 463 6.552859 TGAAAAAGACAAGCGATTATGACA 57.447 33.333 0.00 0.00 0.00 3.58
463 464 7.144722 TGAAAAAGACAAGCGATTATGACAT 57.855 32.000 0.00 0.00 0.00 3.06
464 465 8.262715 TGAAAAAGACAAGCGATTATGACATA 57.737 30.769 0.00 0.00 0.00 2.29
465 466 8.892723 TGAAAAAGACAAGCGATTATGACATAT 58.107 29.630 0.00 0.00 0.00 1.78
466 467 9.162793 GAAAAAGACAAGCGATTATGACATATG 57.837 33.333 0.00 0.00 0.00 1.78
467 468 8.437360 AAAAGACAAGCGATTATGACATATGA 57.563 30.769 10.38 0.00 0.00 2.15
468 469 8.437360 AAAGACAAGCGATTATGACATATGAA 57.563 30.769 10.38 0.00 0.00 2.57
469 470 8.437360 AAGACAAGCGATTATGACATATGAAA 57.563 30.769 10.38 0.00 0.00 2.69
470 471 8.437360 AGACAAGCGATTATGACATATGAAAA 57.563 30.769 10.38 0.00 0.00 2.29
471 472 8.338259 AGACAAGCGATTATGACATATGAAAAC 58.662 33.333 10.38 0.00 0.00 2.43
472 473 8.213518 ACAAGCGATTATGACATATGAAAACT 57.786 30.769 10.38 0.00 0.00 2.66
473 474 8.124823 ACAAGCGATTATGACATATGAAAACTG 58.875 33.333 10.38 0.00 0.00 3.16
474 475 8.337532 CAAGCGATTATGACATATGAAAACTGA 58.662 33.333 10.38 0.00 0.00 3.41
475 476 8.081208 AGCGATTATGACATATGAAAACTGAG 57.919 34.615 10.38 0.00 0.00 3.35
476 477 7.712639 AGCGATTATGACATATGAAAACTGAGT 59.287 33.333 10.38 0.00 0.00 3.41
499 500 3.431922 TTAACATTCTCGTCTAGGCCG 57.568 47.619 0.00 0.00 0.00 6.13
510 511 1.137282 GTCTAGGCCGAGGGAAAAGAG 59.863 57.143 13.44 0.00 0.00 2.85
573 574 1.092345 GCGGCCCACATTTCTCTCTC 61.092 60.000 0.00 0.00 0.00 3.20
574 575 0.250234 CGGCCCACATTTCTCTCTCA 59.750 55.000 0.00 0.00 0.00 3.27
575 576 1.339055 CGGCCCACATTTCTCTCTCAA 60.339 52.381 0.00 0.00 0.00 3.02
576 577 2.795329 GGCCCACATTTCTCTCTCAAA 58.205 47.619 0.00 0.00 0.00 2.69
577 578 3.157087 GGCCCACATTTCTCTCTCAAAA 58.843 45.455 0.00 0.00 0.00 2.44
578 579 3.573967 GGCCCACATTTCTCTCTCAAAAA 59.426 43.478 0.00 0.00 0.00 1.94
579 580 4.221482 GGCCCACATTTCTCTCTCAAAAAT 59.779 41.667 0.00 0.00 0.00 1.82
580 581 5.166398 GCCCACATTTCTCTCTCAAAAATG 58.834 41.667 5.71 5.71 43.02 2.32
581 582 5.166398 CCCACATTTCTCTCTCAAAAATGC 58.834 41.667 6.90 0.00 41.76 3.56
582 583 5.047519 CCCACATTTCTCTCTCAAAAATGCT 60.048 40.000 6.90 0.00 41.76 3.79
583 584 6.151648 CCCACATTTCTCTCTCAAAAATGCTA 59.848 38.462 6.90 0.00 41.76 3.49
584 585 7.249147 CCACATTTCTCTCTCAAAAATGCTAG 58.751 38.462 6.90 0.00 41.76 3.42
585 586 7.120285 CCACATTTCTCTCTCAAAAATGCTAGA 59.880 37.037 0.00 0.00 41.76 2.43
586 587 7.961827 CACATTTCTCTCTCAAAAATGCTAGAC 59.038 37.037 0.00 0.00 41.76 2.59
587 588 7.882271 ACATTTCTCTCTCAAAAATGCTAGACT 59.118 33.333 0.00 0.00 41.76 3.24
588 589 8.728833 CATTTCTCTCTCAAAAATGCTAGACTT 58.271 33.333 0.00 0.00 34.65 3.01
589 590 9.950496 ATTTCTCTCTCAAAAATGCTAGACTTA 57.050 29.630 0.00 0.00 0.00 2.24
590 591 8.764524 TTCTCTCTCAAAAATGCTAGACTTAC 57.235 34.615 0.00 0.00 0.00 2.34
591 592 7.030165 TCTCTCTCAAAAATGCTAGACTTACG 58.970 38.462 0.00 0.00 0.00 3.18
592 593 6.688578 TCTCTCAAAAATGCTAGACTTACGT 58.311 36.000 0.00 0.00 0.00 3.57
593 594 7.823665 TCTCTCAAAAATGCTAGACTTACGTA 58.176 34.615 0.00 0.00 0.00 3.57
594 595 8.301720 TCTCTCAAAAATGCTAGACTTACGTAA 58.698 33.333 7.94 7.94 0.00 3.18
595 596 8.997621 TCTCAAAAATGCTAGACTTACGTAAT 57.002 30.769 8.76 0.00 0.00 1.89
596 597 8.869897 TCTCAAAAATGCTAGACTTACGTAATG 58.130 33.333 8.76 5.91 0.00 1.90
597 598 7.461107 TCAAAAATGCTAGACTTACGTAATGC 58.539 34.615 8.76 8.96 0.00 3.56
598 599 7.333423 TCAAAAATGCTAGACTTACGTAATGCT 59.667 33.333 8.76 11.24 0.00 3.79
599 600 6.589830 AAATGCTAGACTTACGTAATGCTG 57.410 37.500 8.76 0.00 0.00 4.41
600 601 4.713824 TGCTAGACTTACGTAATGCTGT 57.286 40.909 8.76 2.91 0.00 4.40
601 602 5.068234 TGCTAGACTTACGTAATGCTGTT 57.932 39.130 8.76 0.00 0.00 3.16
602 603 6.198650 TGCTAGACTTACGTAATGCTGTTA 57.801 37.500 8.76 0.00 0.00 2.41
603 604 6.032094 TGCTAGACTTACGTAATGCTGTTAC 58.968 40.000 8.76 3.41 0.00 2.50
627 628 7.620397 CGTATCCTACGTAATCCTTCTTTTC 57.380 40.000 0.00 0.00 46.41 2.29
628 629 6.640092 CGTATCCTACGTAATCCTTCTTTTCC 59.360 42.308 0.00 0.00 46.41 3.13
629 630 5.349061 TCCTACGTAATCCTTCTTTTCCC 57.651 43.478 0.00 0.00 0.00 3.97
630 631 5.028131 TCCTACGTAATCCTTCTTTTCCCT 58.972 41.667 0.00 0.00 0.00 4.20
631 632 6.197168 TCCTACGTAATCCTTCTTTTCCCTA 58.803 40.000 0.00 0.00 0.00 3.53
632 633 6.669154 TCCTACGTAATCCTTCTTTTCCCTAA 59.331 38.462 0.00 0.00 0.00 2.69
633 634 6.760298 CCTACGTAATCCTTCTTTTCCCTAAC 59.240 42.308 0.00 0.00 0.00 2.34
634 635 5.494724 ACGTAATCCTTCTTTTCCCTAACC 58.505 41.667 0.00 0.00 0.00 2.85
635 636 5.013391 ACGTAATCCTTCTTTTCCCTAACCA 59.987 40.000 0.00 0.00 0.00 3.67
636 637 5.941647 CGTAATCCTTCTTTTCCCTAACCAA 59.058 40.000 0.00 0.00 0.00 3.67
637 638 6.431852 CGTAATCCTTCTTTTCCCTAACCAAA 59.568 38.462 0.00 0.00 0.00 3.28
638 639 6.665992 AATCCTTCTTTTCCCTAACCAAAC 57.334 37.500 0.00 0.00 0.00 2.93
639 640 5.132043 TCCTTCTTTTCCCTAACCAAACA 57.868 39.130 0.00 0.00 0.00 2.83
640 641 4.891168 TCCTTCTTTTCCCTAACCAAACAC 59.109 41.667 0.00 0.00 0.00 3.32
641 642 4.038763 CCTTCTTTTCCCTAACCAAACACC 59.961 45.833 0.00 0.00 0.00 4.16
642 643 3.568443 TCTTTTCCCTAACCAAACACCC 58.432 45.455 0.00 0.00 0.00 4.61
643 644 3.205733 TCTTTTCCCTAACCAAACACCCT 59.794 43.478 0.00 0.00 0.00 4.34
644 645 2.963599 TTCCCTAACCAAACACCCTC 57.036 50.000 0.00 0.00 0.00 4.30
645 646 1.069775 TCCCTAACCAAACACCCTCC 58.930 55.000 0.00 0.00 0.00 4.30
646 647 0.039180 CCCTAACCAAACACCCTCCC 59.961 60.000 0.00 0.00 0.00 4.30
647 648 0.039180 CCTAACCAAACACCCTCCCC 59.961 60.000 0.00 0.00 0.00 4.81
648 649 0.039180 CTAACCAAACACCCTCCCCC 59.961 60.000 0.00 0.00 0.00 5.40
667 668 2.583472 CTGATTTTCAGGGTGGGCC 58.417 57.895 0.00 0.00 40.71 5.80
682 683 3.335711 GCCCCAGCCTCCACTAAT 58.664 61.111 0.00 0.00 0.00 1.73
683 684 2.539983 GCCCCAGCCTCCACTAATA 58.460 57.895 0.00 0.00 0.00 0.98
684 685 1.068121 GCCCCAGCCTCCACTAATAT 58.932 55.000 0.00 0.00 0.00 1.28
685 686 1.003696 GCCCCAGCCTCCACTAATATC 59.996 57.143 0.00 0.00 0.00 1.63
686 687 1.630878 CCCCAGCCTCCACTAATATCC 59.369 57.143 0.00 0.00 0.00 2.59
687 688 2.338809 CCCAGCCTCCACTAATATCCA 58.661 52.381 0.00 0.00 0.00 3.41
688 689 2.711009 CCCAGCCTCCACTAATATCCAA 59.289 50.000 0.00 0.00 0.00 3.53
689 690 3.331889 CCCAGCCTCCACTAATATCCAAT 59.668 47.826 0.00 0.00 0.00 3.16
690 691 4.202609 CCCAGCCTCCACTAATATCCAATT 60.203 45.833 0.00 0.00 0.00 2.32
691 692 4.763793 CCAGCCTCCACTAATATCCAATTG 59.236 45.833 0.00 0.00 0.00 2.32
692 693 5.456619 CCAGCCTCCACTAATATCCAATTGA 60.457 44.000 7.12 0.00 0.00 2.57
693 694 6.064060 CAGCCTCCACTAATATCCAATTGAA 58.936 40.000 7.12 0.00 0.00 2.69
694 695 6.206243 CAGCCTCCACTAATATCCAATTGAAG 59.794 42.308 7.12 0.00 0.00 3.02
695 696 5.474876 GCCTCCACTAATATCCAATTGAAGG 59.525 44.000 7.12 0.00 0.00 3.46
696 697 5.474876 CCTCCACTAATATCCAATTGAAGGC 59.525 44.000 7.12 0.00 0.00 4.35
697 698 6.266131 TCCACTAATATCCAATTGAAGGCT 57.734 37.500 7.12 0.00 0.00 4.58
698 699 6.064060 TCCACTAATATCCAATTGAAGGCTG 58.936 40.000 7.12 0.00 0.00 4.85
699 700 5.278660 CCACTAATATCCAATTGAAGGCTGC 60.279 44.000 7.12 0.00 0.00 5.25
700 701 4.829492 ACTAATATCCAATTGAAGGCTGCC 59.171 41.667 11.65 11.65 0.00 4.85
701 702 2.824689 TATCCAATTGAAGGCTGCCA 57.175 45.000 22.65 0.00 0.00 4.92
702 703 1.941377 ATCCAATTGAAGGCTGCCAA 58.059 45.000 22.65 6.94 0.00 4.52
703 704 0.968405 TCCAATTGAAGGCTGCCAAC 59.032 50.000 22.65 14.32 0.00 3.77
704 705 0.971386 CCAATTGAAGGCTGCCAACT 59.029 50.000 22.65 4.36 0.00 3.16
705 706 1.067354 CCAATTGAAGGCTGCCAACTC 60.067 52.381 22.65 14.28 0.00 3.01
706 707 1.614903 CAATTGAAGGCTGCCAACTCA 59.385 47.619 22.65 16.71 0.00 3.41
707 708 2.226962 ATTGAAGGCTGCCAACTCAT 57.773 45.000 22.65 3.00 0.00 2.90
708 709 1.999648 TTGAAGGCTGCCAACTCATT 58.000 45.000 22.65 4.70 0.00 2.57
709 710 1.999648 TGAAGGCTGCCAACTCATTT 58.000 45.000 22.65 3.88 0.00 2.32
710 711 1.888512 TGAAGGCTGCCAACTCATTTC 59.111 47.619 22.65 13.89 0.00 2.17
711 712 1.888512 GAAGGCTGCCAACTCATTTCA 59.111 47.619 22.65 0.00 0.00 2.69
712 713 2.226962 AGGCTGCCAACTCATTTCAT 57.773 45.000 22.65 0.00 0.00 2.57
713 714 2.532843 AGGCTGCCAACTCATTTCATT 58.467 42.857 22.65 0.00 0.00 2.57
714 715 2.494870 AGGCTGCCAACTCATTTCATTC 59.505 45.455 22.65 0.00 0.00 2.67
715 716 2.523015 GCTGCCAACTCATTTCATTCG 58.477 47.619 0.00 0.00 0.00 3.34
716 717 2.095059 GCTGCCAACTCATTTCATTCGT 60.095 45.455 0.00 0.00 0.00 3.85
717 718 3.126858 GCTGCCAACTCATTTCATTCGTA 59.873 43.478 0.00 0.00 0.00 3.43
718 719 4.379394 GCTGCCAACTCATTTCATTCGTAA 60.379 41.667 0.00 0.00 0.00 3.18
719 720 5.295431 TGCCAACTCATTTCATTCGTAAG 57.705 39.130 0.00 0.00 0.00 2.34
748 749 8.382875 ACGTAAAAATATTTTCGTAGGTGTAGC 58.617 33.333 20.02 2.41 46.30 3.58
749 750 8.382130 CGTAAAAATATTTTCGTAGGTGTAGCA 58.618 33.333 13.68 0.00 35.42 3.49
814 818 2.515398 CACCACAAGCCTCCCACA 59.485 61.111 0.00 0.00 0.00 4.17
878 883 2.184020 CTCACGGATGGACCCAGCAA 62.184 60.000 6.63 0.00 33.47 3.91
881 886 2.409870 CGGATGGACCCAGCAAAGC 61.410 63.158 6.63 0.00 33.47 3.51
955 962 4.042187 CCTCCCAACTCCTTCCCATATAAG 59.958 50.000 0.00 0.00 0.00 1.73
1002 1012 1.063006 CCAAGCATCAACATCCGCG 59.937 57.895 0.00 0.00 0.00 6.46
1296 7658 3.490759 CACTGCCATGGACGTCGC 61.491 66.667 18.40 7.86 0.00 5.19
1347 7712 1.099879 TACGGCTTCGGAGGCTAGAC 61.100 60.000 16.26 0.00 45.73 2.59
1404 7777 5.539582 TTTTCTGTGTTATATGTGCCGTC 57.460 39.130 0.00 0.00 0.00 4.79
1440 7813 1.083401 CTCTGTCGTGCGTTTGTGC 60.083 57.895 0.00 0.00 0.00 4.57
1445 7818 2.052237 CGTGCGTTTGTGCTCACC 60.052 61.111 0.00 0.00 35.36 4.02
1544 7928 9.860898 AATTGTTTTATAAGACTGGCTGATTTC 57.139 29.630 7.57 0.00 0.00 2.17
1562 7966 8.677300 GCTGATTTCATCTGTTCATTTTACCTA 58.323 33.333 0.00 0.00 0.00 3.08
1604 8045 5.794687 ATCTTTTGTCATGCATTGCAATG 57.205 34.783 30.92 30.92 43.62 2.82
1632 8073 1.019805 GTGCTTCCGCTCAGTTACCC 61.020 60.000 0.00 0.00 36.97 3.69
1638 8079 0.892755 CCGCTCAGTTACCCACAGTA 59.107 55.000 0.00 0.00 0.00 2.74
1747 8190 4.284746 GGATCGGGATTCAGGATCTAAAGT 59.715 45.833 12.90 0.00 37.36 2.66
1757 8200 6.305272 TCAGGATCTAAAGTTGCTGAGATT 57.695 37.500 7.84 0.00 37.32 2.40
1771 8214 3.008330 CTGAGATTTTGGAGTCCTGCAG 58.992 50.000 11.33 6.78 31.08 4.41
1802 8278 4.162888 TGAATCAAGCCTCTGAAGCATCTA 59.837 41.667 0.52 0.00 0.00 1.98
1844 8322 9.119329 GTACATGCGACATTTATAAGTCTAGAG 57.881 37.037 0.00 0.00 32.68 2.43
1859 8337 6.963083 AGTCTAGAGTGTAGAACAACTGTT 57.037 37.500 0.00 0.00 41.64 3.16
1876 8354 1.155042 GTTTGAGGCTCTGCAGTCTG 58.845 55.000 16.72 6.68 33.37 3.51
1877 8355 0.604780 TTTGAGGCTCTGCAGTCTGC 60.605 55.000 18.32 18.32 45.29 4.26
2163 8667 4.217334 TCATTCTTTCATGCCGCTGTTAAA 59.783 37.500 0.00 0.00 0.00 1.52
2164 8668 3.552604 TCTTTCATGCCGCTGTTAAAC 57.447 42.857 0.00 0.00 0.00 2.01
2217 9498 2.818130 TTTGACTTCCAATGGCAAGC 57.182 45.000 10.11 5.66 34.23 4.01
2280 9561 7.271438 GCTAGCTTAGTGTTTTGACTTAATTGC 59.729 37.037 7.70 0.00 0.00 3.56
2377 9658 4.504858 CACTTCTCCGGCTTACAAACTAT 58.495 43.478 0.00 0.00 0.00 2.12
2379 9660 5.749109 CACTTCTCCGGCTTACAAACTATAG 59.251 44.000 0.00 0.00 0.00 1.31
2430 9711 8.833231 TCCTAAAACTAGAGAAAACATCACTG 57.167 34.615 0.00 0.00 31.03 3.66
2431 9712 7.387948 TCCTAAAACTAGAGAAAACATCACTGC 59.612 37.037 0.00 0.00 31.03 4.40
2432 9713 7.389053 CCTAAAACTAGAGAAAACATCACTGCT 59.611 37.037 0.00 0.00 31.03 4.24
2435 9716 7.840342 AACTAGAGAAAACATCACTGCTATG 57.160 36.000 0.00 0.00 31.03 2.23
2448 9729 6.882610 TCACTGCTATGTTTCTTGTCAATT 57.117 33.333 0.00 0.00 0.00 2.32
2484 9765 5.324697 GCGTTTGAAGGTATGACAGAATTC 58.675 41.667 0.00 0.00 0.00 2.17
2524 9806 6.711645 TGGCCATTTTCGGTAACCTATAATAC 59.288 38.462 0.00 0.00 0.00 1.89
2562 9844 4.576053 CGTAGATCAATGGCATTTGGAAGA 59.424 41.667 10.65 4.78 0.00 2.87
2574 9856 5.406477 GGCATTTGGAAGATTCAGTTTCAAC 59.594 40.000 0.00 0.00 0.00 3.18
2633 9915 3.461773 GGCGCTGCTCCTAGGACA 61.462 66.667 7.62 10.37 0.00 4.02
2654 9936 5.579047 ACATGTTCAGGAAAATACCATCCA 58.421 37.500 0.00 0.00 38.23 3.41
2677 9959 7.997107 CATGAAAACATGGAAAGACATATGG 57.003 36.000 7.80 0.00 0.00 2.74
2680 9962 6.152661 TGAAAACATGGAAAGACATATGGGAC 59.847 38.462 7.80 0.00 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.281498 TCATCGTTGAATTCATCGCGTC 59.719 45.455 26.62 0.00 38.52 5.19
2 3 2.996691 TCATCGTTGAATTCATCGCG 57.003 45.000 26.62 21.30 38.52 5.87
3 4 4.029308 CGTTTTCATCGTTGAATTCATCGC 60.029 41.667 26.62 14.08 41.38 4.58
4 5 4.491942 CCGTTTTCATCGTTGAATTCATCG 59.508 41.667 25.86 25.86 41.38 3.84
5 6 5.390613 ACCGTTTTCATCGTTGAATTCATC 58.609 37.500 9.40 7.73 41.38 2.92
7 8 4.822036 ACCGTTTTCATCGTTGAATTCA 57.178 36.364 3.38 3.38 41.38 2.57
8 9 7.611821 TTAAACCGTTTTCATCGTTGAATTC 57.388 32.000 9.61 0.00 41.38 2.17
9 10 7.988904 TTTAAACCGTTTTCATCGTTGAATT 57.011 28.000 9.61 3.36 41.38 2.17
11 12 7.988904 ATTTTAAACCGTTTTCATCGTTGAA 57.011 28.000 4.80 4.80 40.09 2.69
12 13 7.988904 AATTTTAAACCGTTTTCATCGTTGA 57.011 28.000 0.96 0.00 0.00 3.18
13 14 8.321716 TCAAATTTTAAACCGTTTTCATCGTTG 58.678 29.630 0.96 1.76 0.00 4.10
14 15 8.408743 TCAAATTTTAAACCGTTTTCATCGTT 57.591 26.923 0.96 0.00 0.00 3.85
15 16 7.988904 TCAAATTTTAAACCGTTTTCATCGT 57.011 28.000 0.96 0.00 0.00 3.73
16 17 7.521244 CGTTCAAATTTTAAACCGTTTTCATCG 59.479 33.333 0.96 0.00 0.00 3.84
17 18 7.317035 GCGTTCAAATTTTAAACCGTTTTCATC 59.683 33.333 0.96 0.00 0.00 2.92
18 19 7.120634 GCGTTCAAATTTTAAACCGTTTTCAT 58.879 30.769 0.96 0.00 0.00 2.57
19 20 6.090358 TGCGTTCAAATTTTAAACCGTTTTCA 59.910 30.769 0.96 0.00 0.00 2.69
20 21 6.467648 TGCGTTCAAATTTTAAACCGTTTTC 58.532 32.000 0.96 0.00 0.00 2.29
21 22 6.404712 TGCGTTCAAATTTTAAACCGTTTT 57.595 29.167 0.96 0.00 0.00 2.43
22 23 6.255887 TCATGCGTTCAAATTTTAAACCGTTT 59.744 30.769 1.40 1.40 0.00 3.60
23 24 5.749109 TCATGCGTTCAAATTTTAAACCGTT 59.251 32.000 7.35 0.00 0.00 4.44
24 25 5.282510 TCATGCGTTCAAATTTTAAACCGT 58.717 33.333 7.35 1.59 0.00 4.83
25 26 5.814314 TCATGCGTTCAAATTTTAAACCG 57.186 34.783 7.35 0.90 0.00 4.44
31 32 9.643693 ATCTCTTAAATCATGCGTTCAAATTTT 57.356 25.926 0.00 0.00 0.00 1.82
37 38 9.720667 CATTTTATCTCTTAAATCATGCGTTCA 57.279 29.630 0.00 0.00 30.03 3.18
38 39 9.722056 ACATTTTATCTCTTAAATCATGCGTTC 57.278 29.630 0.00 0.00 30.03 3.95
102 103 4.511826 CCACTTCTCGCAAGTAGAGTTTTT 59.488 41.667 0.00 0.00 37.07 1.94
103 104 4.058817 CCACTTCTCGCAAGTAGAGTTTT 58.941 43.478 0.00 0.00 37.07 2.43
104 105 3.069729 ACCACTTCTCGCAAGTAGAGTTT 59.930 43.478 0.00 0.00 37.07 2.66
105 106 2.628657 ACCACTTCTCGCAAGTAGAGTT 59.371 45.455 0.00 0.00 37.07 3.01
106 107 2.029828 CACCACTTCTCGCAAGTAGAGT 60.030 50.000 0.00 0.00 37.07 3.24
107 108 2.600731 CACCACTTCTCGCAAGTAGAG 58.399 52.381 0.00 0.00 37.09 2.43
108 109 1.336887 GCACCACTTCTCGCAAGTAGA 60.337 52.381 0.00 0.00 39.48 2.59
109 110 1.071605 GCACCACTTCTCGCAAGTAG 58.928 55.000 0.00 0.00 39.48 2.57
110 111 0.391228 TGCACCACTTCTCGCAAGTA 59.609 50.000 0.00 0.00 39.48 2.24
111 112 1.146041 TGCACCACTTCTCGCAAGT 59.854 52.632 0.00 0.00 39.48 3.16
112 113 1.571460 GTGCACCACTTCTCGCAAG 59.429 57.895 5.22 0.00 35.87 4.01
113 114 2.243957 CGTGCACCACTTCTCGCAA 61.244 57.895 12.15 0.00 35.87 4.85
114 115 2.661537 CGTGCACCACTTCTCGCA 60.662 61.111 12.15 0.00 31.34 5.10
115 116 2.661866 ACGTGCACCACTTCTCGC 60.662 61.111 12.15 0.00 31.34 5.03
116 117 2.943345 GCACGTGCACCACTTCTCG 61.943 63.158 34.52 0.00 41.59 4.04
117 118 2.939022 GCACGTGCACCACTTCTC 59.061 61.111 34.52 0.76 41.59 2.87
133 134 1.591059 TGCATTTGTGGCGTGTTGC 60.591 52.632 0.00 0.00 45.38 4.17
134 135 0.248990 AGTGCATTTGTGGCGTGTTG 60.249 50.000 0.00 0.00 0.00 3.33
135 136 0.248990 CAGTGCATTTGTGGCGTGTT 60.249 50.000 0.00 0.00 0.00 3.32
136 137 1.100463 TCAGTGCATTTGTGGCGTGT 61.100 50.000 0.00 0.00 0.00 4.49
137 138 0.661187 GTCAGTGCATTTGTGGCGTG 60.661 55.000 0.00 0.00 0.00 5.34
138 139 1.654220 GTCAGTGCATTTGTGGCGT 59.346 52.632 0.00 0.00 0.00 5.68
139 140 1.081242 GGTCAGTGCATTTGTGGCG 60.081 57.895 0.00 0.00 0.00 5.69
140 141 0.675633 AAGGTCAGTGCATTTGTGGC 59.324 50.000 0.00 0.00 0.00 5.01
141 142 1.000060 CCAAGGTCAGTGCATTTGTGG 60.000 52.381 0.00 0.00 0.00 4.17
142 143 1.000060 CCCAAGGTCAGTGCATTTGTG 60.000 52.381 0.00 0.00 0.00 3.33
143 144 1.331214 CCCAAGGTCAGTGCATTTGT 58.669 50.000 0.00 0.00 0.00 2.83
144 145 1.331214 ACCCAAGGTCAGTGCATTTG 58.669 50.000 0.00 0.00 0.00 2.32
145 146 3.848353 ACCCAAGGTCAGTGCATTT 57.152 47.368 0.00 0.00 0.00 2.32
155 156 4.265056 GCCCACACGACCCAAGGT 62.265 66.667 0.00 0.00 39.44 3.50
165 166 4.101790 CAACATCGCCGCCCACAC 62.102 66.667 0.00 0.00 0.00 3.82
174 175 2.395690 CTTCGACGGCAACATCGC 59.604 61.111 0.00 0.00 38.24 4.58
175 176 2.094659 AGCTTCGACGGCAACATCG 61.095 57.895 11.38 0.00 39.72 3.84
176 177 1.421485 CAGCTTCGACGGCAACATC 59.579 57.895 11.38 0.00 0.00 3.06
177 178 2.034879 CCAGCTTCGACGGCAACAT 61.035 57.895 11.38 0.00 0.00 2.71
178 179 2.664851 CCAGCTTCGACGGCAACA 60.665 61.111 11.38 0.00 0.00 3.33
179 180 2.665185 ACCAGCTTCGACGGCAAC 60.665 61.111 11.38 0.00 0.00 4.17
180 181 2.357034 GACCAGCTTCGACGGCAA 60.357 61.111 11.38 0.00 0.00 4.52
181 182 4.717629 CGACCAGCTTCGACGGCA 62.718 66.667 1.44 0.00 41.78 5.69
182 183 4.719369 ACGACCAGCTTCGACGGC 62.719 66.667 14.48 1.75 41.78 5.68
183 184 2.504244 GACGACCAGCTTCGACGG 60.504 66.667 14.48 0.00 41.78 4.79
184 185 2.870161 CGACGACCAGCTTCGACG 60.870 66.667 14.48 15.19 46.92 5.12
185 186 1.796749 GACGACGACCAGCTTCGAC 60.797 63.158 14.48 7.44 40.34 4.20
186 187 1.583495 ATGACGACGACCAGCTTCGA 61.583 55.000 14.48 0.00 40.34 3.71
187 188 1.154016 ATGACGACGACCAGCTTCG 60.154 57.895 0.00 6.27 43.18 3.79
188 189 0.388649 ACATGACGACGACCAGCTTC 60.389 55.000 0.00 0.00 0.00 3.86
189 190 0.388649 GACATGACGACGACCAGCTT 60.389 55.000 0.00 0.00 0.00 3.74
190 191 1.213013 GACATGACGACGACCAGCT 59.787 57.895 0.00 0.00 0.00 4.24
191 192 2.152699 CGACATGACGACGACCAGC 61.153 63.158 12.27 0.00 34.56 4.85
192 193 0.793478 GACGACATGACGACGACCAG 60.793 60.000 23.72 0.00 36.58 4.00
193 194 1.208358 GACGACATGACGACGACCA 59.792 57.895 23.72 0.00 36.58 4.02
194 195 0.723414 TAGACGACATGACGACGACC 59.277 55.000 23.72 7.39 36.58 4.79
195 196 1.795536 GTAGACGACATGACGACGAC 58.204 55.000 23.72 18.64 36.58 4.34
196 197 0.367887 CGTAGACGACATGACGACGA 59.632 55.000 23.72 11.32 43.02 4.20
197 198 0.367887 TCGTAGACGACATGACGACG 59.632 55.000 23.72 20.86 44.22 5.12
208 209 2.007641 GCGCCGGTTATCGTAGACG 61.008 63.158 1.90 0.00 42.51 4.18
209 210 0.248784 AAGCGCCGGTTATCGTAGAC 60.249 55.000 2.29 0.00 42.51 2.59
210 211 0.457035 AAAGCGCCGGTTATCGTAGA 59.543 50.000 2.29 0.00 45.75 2.59
211 212 0.575390 CAAAGCGCCGGTTATCGTAG 59.425 55.000 2.29 0.00 37.11 3.51
212 213 1.422950 GCAAAGCGCCGGTTATCGTA 61.423 55.000 2.29 0.00 37.11 3.43
213 214 2.746803 GCAAAGCGCCGGTTATCGT 61.747 57.895 2.29 0.00 37.11 3.73
214 215 1.977594 AAGCAAAGCGCCGGTTATCG 61.978 55.000 2.29 0.00 44.04 2.92
215 216 0.523335 CAAGCAAAGCGCCGGTTATC 60.523 55.000 2.29 0.00 44.04 1.75
216 217 1.241315 ACAAGCAAAGCGCCGGTTAT 61.241 50.000 2.29 0.00 44.04 1.89
217 218 1.894756 ACAAGCAAAGCGCCGGTTA 60.895 52.632 2.29 0.00 44.04 2.85
218 219 3.216292 ACAAGCAAAGCGCCGGTT 61.216 55.556 2.29 1.58 44.04 4.44
219 220 3.964875 CACAAGCAAAGCGCCGGT 61.965 61.111 2.29 0.00 44.04 5.28
220 221 4.705519 CCACAAGCAAAGCGCCGG 62.706 66.667 2.29 0.00 44.04 6.13
221 222 4.705519 CCCACAAGCAAAGCGCCG 62.706 66.667 2.29 0.00 44.04 6.46
222 223 3.605664 ACCCACAAGCAAAGCGCC 61.606 61.111 2.29 0.00 44.04 6.53
223 224 2.355009 CACCCACAAGCAAAGCGC 60.355 61.111 0.00 0.00 42.91 5.92
224 225 2.015227 AACCACCCACAAGCAAAGCG 62.015 55.000 0.00 0.00 0.00 4.68
225 226 0.530431 CAACCACCCACAAGCAAAGC 60.530 55.000 0.00 0.00 0.00 3.51
226 227 0.530431 GCAACCACCCACAAGCAAAG 60.530 55.000 0.00 0.00 0.00 2.77
227 228 1.519719 GCAACCACCCACAAGCAAA 59.480 52.632 0.00 0.00 0.00 3.68
228 229 2.430610 GGCAACCACCCACAAGCAA 61.431 57.895 0.00 0.00 0.00 3.91
229 230 2.837291 GGCAACCACCCACAAGCA 60.837 61.111 0.00 0.00 0.00 3.91
230 231 2.521708 AGGCAACCACCCACAAGC 60.522 61.111 0.00 0.00 37.17 4.01
231 232 0.468029 AAGAGGCAACCACCCACAAG 60.468 55.000 0.00 0.00 37.17 3.16
232 233 0.467290 GAAGAGGCAACCACCCACAA 60.467 55.000 0.00 0.00 37.17 3.33
233 234 1.150536 GAAGAGGCAACCACCCACA 59.849 57.895 0.00 0.00 37.17 4.17
234 235 1.150536 TGAAGAGGCAACCACCCAC 59.849 57.895 0.00 0.00 37.17 4.61
235 236 1.150536 GTGAAGAGGCAACCACCCA 59.849 57.895 0.00 0.00 37.17 4.51
236 237 1.603739 GGTGAAGAGGCAACCACCC 60.604 63.158 0.00 0.00 42.30 4.61
237 238 0.606673 GAGGTGAAGAGGCAACCACC 60.607 60.000 0.00 0.00 46.97 4.61
238 239 0.398318 AGAGGTGAAGAGGCAACCAC 59.602 55.000 0.00 0.00 37.17 4.16
239 240 0.397941 CAGAGGTGAAGAGGCAACCA 59.602 55.000 0.00 0.00 37.17 3.67
240 241 0.957888 GCAGAGGTGAAGAGGCAACC 60.958 60.000 0.00 0.00 37.17 3.77
241 242 1.294659 CGCAGAGGTGAAGAGGCAAC 61.295 60.000 0.00 0.00 0.00 4.17
242 243 1.004560 CGCAGAGGTGAAGAGGCAA 60.005 57.895 0.00 0.00 0.00 4.52
243 244 2.659016 CGCAGAGGTGAAGAGGCA 59.341 61.111 0.00 0.00 0.00 4.75
244 245 2.125350 CCGCAGAGGTGAAGAGGC 60.125 66.667 0.00 0.00 34.51 4.70
245 246 1.954362 CTCCCGCAGAGGTGAAGAGG 61.954 65.000 0.00 0.00 39.13 3.69
246 247 0.967887 TCTCCCGCAGAGGTGAAGAG 60.968 60.000 1.18 0.00 43.44 2.85
247 248 0.967887 CTCTCCCGCAGAGGTGAAGA 60.968 60.000 1.18 0.00 44.75 2.87
248 249 1.515020 CTCTCCCGCAGAGGTGAAG 59.485 63.158 1.18 0.00 44.75 3.02
249 250 3.700109 CTCTCCCGCAGAGGTGAA 58.300 61.111 1.18 0.00 44.75 3.18
261 262 2.363147 AGCAGACCGGGACTCTCC 60.363 66.667 6.32 0.00 35.23 3.71
262 263 2.419739 GGAGCAGACCGGGACTCTC 61.420 68.421 6.32 12.56 0.00 3.20
263 264 2.363147 GGAGCAGACCGGGACTCT 60.363 66.667 6.32 0.00 0.00 3.24
264 265 2.363147 AGGAGCAGACCGGGACTC 60.363 66.667 6.32 6.57 34.73 3.36
265 266 2.363147 GAGGAGCAGACCGGGACT 60.363 66.667 6.32 1.17 34.73 3.85
266 267 3.462678 GGAGGAGCAGACCGGGAC 61.463 72.222 6.32 0.00 34.73 4.46
267 268 4.779733 GGGAGGAGCAGACCGGGA 62.780 72.222 6.32 0.00 34.73 5.14
269 270 2.370445 AATGGGAGGAGCAGACCGG 61.370 63.158 0.00 0.00 34.73 5.28
270 271 1.153289 CAATGGGAGGAGCAGACCG 60.153 63.158 0.00 0.00 34.73 4.79
271 272 1.452833 GCAATGGGAGGAGCAGACC 60.453 63.158 0.00 0.00 0.00 3.85
272 273 1.300963 TGCAATGGGAGGAGCAGAC 59.699 57.895 0.00 0.00 32.48 3.51
273 274 3.824815 TGCAATGGGAGGAGCAGA 58.175 55.556 0.00 0.00 32.48 4.26
274 275 4.237445 CTGCAATGGGAGGAGCAG 57.763 61.111 0.00 0.00 46.98 4.24
275 276 1.203441 AGACTGCAATGGGAGGAGCA 61.203 55.000 0.00 0.00 36.68 4.26
276 277 0.463474 GAGACTGCAATGGGAGGAGC 60.463 60.000 0.00 0.00 36.68 4.70
277 278 0.179089 CGAGACTGCAATGGGAGGAG 60.179 60.000 0.00 0.00 36.68 3.69
278 279 0.614697 TCGAGACTGCAATGGGAGGA 60.615 55.000 0.00 0.00 36.68 3.71
279 280 0.460987 GTCGAGACTGCAATGGGAGG 60.461 60.000 0.00 0.00 36.68 4.30
280 281 0.534412 AGTCGAGACTGCAATGGGAG 59.466 55.000 4.78 0.00 40.75 4.30
281 282 0.976641 AAGTCGAGACTGCAATGGGA 59.023 50.000 6.51 0.00 41.58 4.37
282 283 1.066573 AGAAGTCGAGACTGCAATGGG 60.067 52.381 13.27 0.00 41.58 4.00
283 284 2.376808 AGAAGTCGAGACTGCAATGG 57.623 50.000 13.27 0.00 41.58 3.16
284 285 3.583806 AGAAGAAGTCGAGACTGCAATG 58.416 45.455 13.27 0.00 41.58 2.82
285 286 3.951775 AGAAGAAGTCGAGACTGCAAT 57.048 42.857 13.27 2.09 41.58 3.56
286 287 3.735237 AAGAAGAAGTCGAGACTGCAA 57.265 42.857 13.27 0.00 41.58 4.08
287 288 3.553096 GGAAAGAAGAAGTCGAGACTGCA 60.553 47.826 13.27 0.00 41.58 4.41
288 289 2.990514 GGAAAGAAGAAGTCGAGACTGC 59.009 50.000 6.51 4.72 41.58 4.40
289 290 4.233789 CTGGAAAGAAGAAGTCGAGACTG 58.766 47.826 6.51 0.00 41.58 3.51
290 291 3.305744 GCTGGAAAGAAGAAGTCGAGACT 60.306 47.826 0.00 0.00 44.94 3.24
291 292 2.990514 GCTGGAAAGAAGAAGTCGAGAC 59.009 50.000 0.00 0.00 0.00 3.36
292 293 2.628178 TGCTGGAAAGAAGAAGTCGAGA 59.372 45.455 0.00 0.00 0.00 4.04
293 294 2.992543 CTGCTGGAAAGAAGAAGTCGAG 59.007 50.000 0.00 0.00 0.00 4.04
294 295 2.365617 ACTGCTGGAAAGAAGAAGTCGA 59.634 45.455 0.00 0.00 25.81 4.20
295 296 2.478134 CACTGCTGGAAAGAAGAAGTCG 59.522 50.000 0.00 0.00 30.56 4.18
296 297 2.810852 CCACTGCTGGAAAGAAGAAGTC 59.189 50.000 0.00 0.00 40.55 3.01
297 298 2.173569 ACCACTGCTGGAAAGAAGAAGT 59.826 45.455 0.00 0.00 40.55 3.01
298 299 2.551459 CACCACTGCTGGAAAGAAGAAG 59.449 50.000 0.00 0.00 40.55 2.85
299 300 2.575532 CACCACTGCTGGAAAGAAGAA 58.424 47.619 0.00 0.00 40.55 2.52
300 301 1.202806 CCACCACTGCTGGAAAGAAGA 60.203 52.381 0.00 0.00 40.55 2.87
301 302 1.242076 CCACCACTGCTGGAAAGAAG 58.758 55.000 0.00 0.00 40.55 2.85
302 303 0.178992 CCCACCACTGCTGGAAAGAA 60.179 55.000 0.00 0.00 40.55 2.52
303 304 1.059584 TCCCACCACTGCTGGAAAGA 61.060 55.000 0.00 0.00 40.55 2.52
304 305 0.607489 CTCCCACCACTGCTGGAAAG 60.607 60.000 0.00 0.00 40.55 2.62
305 306 1.059584 TCTCCCACCACTGCTGGAAA 61.060 55.000 0.00 0.00 40.55 3.13
306 307 1.461268 TCTCCCACCACTGCTGGAA 60.461 57.895 0.00 0.00 40.55 3.53
307 308 2.204034 TCTCCCACCACTGCTGGA 59.796 61.111 0.00 0.00 40.55 3.86
308 309 2.348998 GTCTCCCACCACTGCTGG 59.651 66.667 0.00 0.00 44.26 4.85
309 310 1.004080 CTGTCTCCCACCACTGCTG 60.004 63.158 0.00 0.00 0.00 4.41
310 311 2.219875 CCTGTCTCCCACCACTGCT 61.220 63.158 0.00 0.00 0.00 4.24
311 312 2.348998 CCTGTCTCCCACCACTGC 59.651 66.667 0.00 0.00 0.00 4.40
312 313 0.904865 TAGCCTGTCTCCCACCACTG 60.905 60.000 0.00 0.00 0.00 3.66
313 314 0.616111 CTAGCCTGTCTCCCACCACT 60.616 60.000 0.00 0.00 0.00 4.00
314 315 1.901085 CTAGCCTGTCTCCCACCAC 59.099 63.158 0.00 0.00 0.00 4.16
315 316 1.990060 GCTAGCCTGTCTCCCACCA 60.990 63.158 2.29 0.00 0.00 4.17
316 317 1.681486 GAGCTAGCCTGTCTCCCACC 61.681 65.000 12.13 0.00 0.00 4.61
317 318 1.819905 GAGCTAGCCTGTCTCCCAC 59.180 63.158 12.13 0.00 0.00 4.61
318 319 1.754621 CGAGCTAGCCTGTCTCCCA 60.755 63.158 12.13 0.00 0.00 4.37
319 320 2.494530 CCGAGCTAGCCTGTCTCCC 61.495 68.421 12.13 0.00 0.00 4.30
320 321 3.124686 CCGAGCTAGCCTGTCTCC 58.875 66.667 12.13 0.00 0.00 3.71
321 322 2.415426 GCCGAGCTAGCCTGTCTC 59.585 66.667 12.13 0.39 0.00 3.36
322 323 3.522731 CGCCGAGCTAGCCTGTCT 61.523 66.667 12.13 0.00 0.00 3.41
323 324 4.577246 CCGCCGAGCTAGCCTGTC 62.577 72.222 12.13 1.23 0.00 3.51
325 326 4.277593 CTCCGCCGAGCTAGCCTG 62.278 72.222 12.13 3.70 0.00 4.85
345 346 1.906105 TACATGTCCACGGGAAGCCC 61.906 60.000 0.00 0.00 41.09 5.19
346 347 0.180406 ATACATGTCCACGGGAAGCC 59.820 55.000 0.00 0.00 31.38 4.35
347 348 2.038387 AATACATGTCCACGGGAAGC 57.962 50.000 0.00 0.00 31.38 3.86
348 349 2.682856 CCAAATACATGTCCACGGGAAG 59.317 50.000 0.00 0.00 31.38 3.46
349 350 2.040545 ACCAAATACATGTCCACGGGAA 59.959 45.455 0.00 0.00 31.38 3.97
350 351 1.631388 ACCAAATACATGTCCACGGGA 59.369 47.619 0.00 0.00 0.00 5.14
351 352 2.122783 ACCAAATACATGTCCACGGG 57.877 50.000 0.00 1.54 0.00 5.28
352 353 4.481463 GAAAACCAAATACATGTCCACGG 58.519 43.478 0.00 1.86 0.00 4.94
353 354 4.155449 CGAAAACCAAATACATGTCCACG 58.845 43.478 0.00 0.00 0.00 4.94
354 355 3.917985 GCGAAAACCAAATACATGTCCAC 59.082 43.478 0.00 0.00 0.00 4.02
355 356 3.057174 GGCGAAAACCAAATACATGTCCA 60.057 43.478 0.00 0.00 0.00 4.02
356 357 3.192633 AGGCGAAAACCAAATACATGTCC 59.807 43.478 0.00 0.00 0.00 4.02
357 358 4.165779 CAGGCGAAAACCAAATACATGTC 58.834 43.478 0.00 0.00 0.00 3.06
358 359 3.056891 CCAGGCGAAAACCAAATACATGT 60.057 43.478 2.69 2.69 0.00 3.21
359 360 3.056891 ACCAGGCGAAAACCAAATACATG 60.057 43.478 0.00 0.00 0.00 3.21
360 361 3.161866 ACCAGGCGAAAACCAAATACAT 58.838 40.909 0.00 0.00 0.00 2.29
361 362 2.588620 ACCAGGCGAAAACCAAATACA 58.411 42.857 0.00 0.00 0.00 2.29
362 363 3.653539 AACCAGGCGAAAACCAAATAC 57.346 42.857 0.00 0.00 0.00 1.89
363 364 4.674281 AAAACCAGGCGAAAACCAAATA 57.326 36.364 0.00 0.00 0.00 1.40
364 365 3.552132 AAAACCAGGCGAAAACCAAAT 57.448 38.095 0.00 0.00 0.00 2.32
365 366 3.263261 GAAAAACCAGGCGAAAACCAAA 58.737 40.909 0.00 0.00 0.00 3.28
366 367 2.418884 GGAAAAACCAGGCGAAAACCAA 60.419 45.455 0.00 0.00 38.79 3.67
367 368 1.137282 GGAAAAACCAGGCGAAAACCA 59.863 47.619 0.00 0.00 38.79 3.67
368 369 1.411246 AGGAAAAACCAGGCGAAAACC 59.589 47.619 0.00 0.00 42.04 3.27
369 370 2.882927 AGGAAAAACCAGGCGAAAAC 57.117 45.000 0.00 0.00 42.04 2.43
370 371 5.538849 AATTAGGAAAAACCAGGCGAAAA 57.461 34.783 0.00 0.00 42.04 2.29
371 372 6.448852 GTTAATTAGGAAAAACCAGGCGAAA 58.551 36.000 0.00 0.00 42.04 3.46
372 373 5.047872 GGTTAATTAGGAAAAACCAGGCGAA 60.048 40.000 1.45 0.00 40.89 4.70
373 374 4.460034 GGTTAATTAGGAAAAACCAGGCGA 59.540 41.667 1.45 0.00 40.89 5.54
374 375 4.673320 CGGTTAATTAGGAAAAACCAGGCG 60.673 45.833 6.41 0.00 41.20 5.52
375 376 4.460034 TCGGTTAATTAGGAAAAACCAGGC 59.540 41.667 6.41 0.00 41.20 4.85
376 377 5.392703 GCTCGGTTAATTAGGAAAAACCAGG 60.393 44.000 6.41 0.00 41.20 4.45
377 378 5.182380 TGCTCGGTTAATTAGGAAAAACCAG 59.818 40.000 6.41 4.44 41.20 4.00
378 379 5.071370 TGCTCGGTTAATTAGGAAAAACCA 58.929 37.500 6.41 0.00 41.20 3.67
379 380 5.632244 TGCTCGGTTAATTAGGAAAAACC 57.368 39.130 0.00 0.00 38.40 3.27
380 381 6.675026 AGTTGCTCGGTTAATTAGGAAAAAC 58.325 36.000 0.00 0.00 0.00 2.43
381 382 6.887626 AGTTGCTCGGTTAATTAGGAAAAA 57.112 33.333 0.00 0.00 0.00 1.94
382 383 8.570068 AATAGTTGCTCGGTTAATTAGGAAAA 57.430 30.769 0.00 0.00 0.00 2.29
383 384 8.570068 AAATAGTTGCTCGGTTAATTAGGAAA 57.430 30.769 0.00 0.00 0.00 3.13
384 385 8.570068 AAAATAGTTGCTCGGTTAATTAGGAA 57.430 30.769 0.00 0.00 0.00 3.36
385 386 8.044908 AGAAAATAGTTGCTCGGTTAATTAGGA 58.955 33.333 0.00 0.00 0.00 2.94
386 387 8.209917 AGAAAATAGTTGCTCGGTTAATTAGG 57.790 34.615 0.00 0.00 0.00 2.69
387 388 9.704098 GAAGAAAATAGTTGCTCGGTTAATTAG 57.296 33.333 0.00 0.00 0.00 1.73
388 389 9.444600 AGAAGAAAATAGTTGCTCGGTTAATTA 57.555 29.630 0.00 0.00 0.00 1.40
389 390 8.336801 AGAAGAAAATAGTTGCTCGGTTAATT 57.663 30.769 0.00 0.00 0.00 1.40
390 391 7.923414 AGAAGAAAATAGTTGCTCGGTTAAT 57.077 32.000 0.00 0.00 0.00 1.40
391 392 7.739498 AAGAAGAAAATAGTTGCTCGGTTAA 57.261 32.000 0.00 0.00 0.00 2.01
392 393 8.836268 TTAAGAAGAAAATAGTTGCTCGGTTA 57.164 30.769 0.00 0.00 0.00 2.85
393 394 7.739498 TTAAGAAGAAAATAGTTGCTCGGTT 57.261 32.000 0.00 0.00 0.00 4.44
394 395 7.923414 ATTAAGAAGAAAATAGTTGCTCGGT 57.077 32.000 0.00 0.00 0.00 4.69
424 425 5.985530 GTCTTTTTCAAAATGGCAGCTTACT 59.014 36.000 0.00 0.00 0.00 2.24
425 426 5.752955 TGTCTTTTTCAAAATGGCAGCTTAC 59.247 36.000 0.00 0.00 0.00 2.34
426 427 5.911752 TGTCTTTTTCAAAATGGCAGCTTA 58.088 33.333 0.00 0.00 0.00 3.09
427 428 4.768583 TGTCTTTTTCAAAATGGCAGCTT 58.231 34.783 0.00 0.00 0.00 3.74
428 429 4.405116 TGTCTTTTTCAAAATGGCAGCT 57.595 36.364 0.00 0.00 0.00 4.24
429 430 4.553351 GCTTGTCTTTTTCAAAATGGCAGC 60.553 41.667 3.55 6.23 0.00 5.25
430 431 4.318263 CGCTTGTCTTTTTCAAAATGGCAG 60.318 41.667 3.55 1.02 0.00 4.85
431 432 3.555139 CGCTTGTCTTTTTCAAAATGGCA 59.445 39.130 0.00 0.00 0.00 4.92
432 433 3.801594 TCGCTTGTCTTTTTCAAAATGGC 59.198 39.130 0.00 0.00 0.00 4.40
433 434 6.529463 AATCGCTTGTCTTTTTCAAAATGG 57.471 33.333 0.00 0.00 0.00 3.16
434 435 8.914654 TCATAATCGCTTGTCTTTTTCAAAATG 58.085 29.630 0.00 0.00 0.00 2.32
435 436 8.915654 GTCATAATCGCTTGTCTTTTTCAAAAT 58.084 29.630 0.00 0.00 0.00 1.82
436 437 7.918033 TGTCATAATCGCTTGTCTTTTTCAAAA 59.082 29.630 0.00 0.00 0.00 2.44
437 438 7.421599 TGTCATAATCGCTTGTCTTTTTCAAA 58.578 30.769 0.00 0.00 0.00 2.69
438 439 6.964908 TGTCATAATCGCTTGTCTTTTTCAA 58.035 32.000 0.00 0.00 0.00 2.69
439 440 6.552859 TGTCATAATCGCTTGTCTTTTTCA 57.447 33.333 0.00 0.00 0.00 2.69
440 441 9.162793 CATATGTCATAATCGCTTGTCTTTTTC 57.837 33.333 0.00 0.00 0.00 2.29
441 442 8.892723 TCATATGTCATAATCGCTTGTCTTTTT 58.107 29.630 1.90 0.00 0.00 1.94
442 443 8.437360 TCATATGTCATAATCGCTTGTCTTTT 57.563 30.769 1.90 0.00 0.00 2.27
443 444 8.437360 TTCATATGTCATAATCGCTTGTCTTT 57.563 30.769 1.90 0.00 0.00 2.52
444 445 8.437360 TTTCATATGTCATAATCGCTTGTCTT 57.563 30.769 1.90 0.00 0.00 3.01
445 446 8.338259 GTTTTCATATGTCATAATCGCTTGTCT 58.662 33.333 1.90 0.00 0.00 3.41
446 447 8.338259 AGTTTTCATATGTCATAATCGCTTGTC 58.662 33.333 1.90 0.00 0.00 3.18
447 448 8.124823 CAGTTTTCATATGTCATAATCGCTTGT 58.875 33.333 1.90 0.00 0.00 3.16
448 449 8.337532 TCAGTTTTCATATGTCATAATCGCTTG 58.662 33.333 1.90 0.00 0.00 4.01
449 450 8.437360 TCAGTTTTCATATGTCATAATCGCTT 57.563 30.769 1.90 0.00 0.00 4.68
450 451 7.712639 ACTCAGTTTTCATATGTCATAATCGCT 59.287 33.333 1.90 0.00 0.00 4.93
451 452 7.855545 ACTCAGTTTTCATATGTCATAATCGC 58.144 34.615 1.90 0.00 0.00 4.58
465 466 9.268268 ACGAGAATGTTAATAACTCAGTTTTCA 57.732 29.630 0.00 0.00 0.00 2.69
466 467 9.742552 GACGAGAATGTTAATAACTCAGTTTTC 57.257 33.333 0.00 0.00 0.00 2.29
467 468 9.490379 AGACGAGAATGTTAATAACTCAGTTTT 57.510 29.630 0.00 0.00 0.00 2.43
469 470 9.790389 CTAGACGAGAATGTTAATAACTCAGTT 57.210 33.333 4.67 0.00 0.00 3.16
470 471 8.407064 CCTAGACGAGAATGTTAATAACTCAGT 58.593 37.037 4.67 0.30 0.00 3.41
471 472 7.380065 GCCTAGACGAGAATGTTAATAACTCAG 59.620 40.741 4.67 0.00 0.00 3.35
472 473 7.201145 GCCTAGACGAGAATGTTAATAACTCA 58.799 38.462 4.67 0.00 0.00 3.41
473 474 6.641723 GGCCTAGACGAGAATGTTAATAACTC 59.358 42.308 4.67 0.00 0.00 3.01
474 475 6.514063 GGCCTAGACGAGAATGTTAATAACT 58.486 40.000 4.67 0.00 0.00 2.24
475 476 5.401674 CGGCCTAGACGAGAATGTTAATAAC 59.598 44.000 0.00 0.00 35.20 1.89
476 477 5.300034 TCGGCCTAGACGAGAATGTTAATAA 59.700 40.000 0.00 0.00 38.55 1.40
499 500 4.835284 AGGACAATCTCTCTTTTCCCTC 57.165 45.455 0.00 0.00 0.00 4.30
510 511 4.578105 CCAGGCTAATTGAAGGACAATCTC 59.422 45.833 0.00 0.00 46.90 2.75
604 605 6.927936 GGGAAAAGAAGGATTACGTAGGATAC 59.072 42.308 0.00 0.00 38.50 2.24
605 606 6.842807 AGGGAAAAGAAGGATTACGTAGGATA 59.157 38.462 0.00 0.00 0.00 2.59
606 607 5.666265 AGGGAAAAGAAGGATTACGTAGGAT 59.334 40.000 0.00 0.00 0.00 3.24
607 608 5.028131 AGGGAAAAGAAGGATTACGTAGGA 58.972 41.667 0.00 0.00 0.00 2.94
608 609 5.354842 AGGGAAAAGAAGGATTACGTAGG 57.645 43.478 0.00 0.00 0.00 3.18
609 610 6.760298 GGTTAGGGAAAAGAAGGATTACGTAG 59.240 42.308 0.00 0.00 0.00 3.51
610 611 6.213195 TGGTTAGGGAAAAGAAGGATTACGTA 59.787 38.462 0.00 0.00 0.00 3.57
611 612 5.013391 TGGTTAGGGAAAAGAAGGATTACGT 59.987 40.000 0.00 0.00 0.00 3.57
612 613 5.493809 TGGTTAGGGAAAAGAAGGATTACG 58.506 41.667 0.00 0.00 0.00 3.18
613 614 7.231925 TGTTTGGTTAGGGAAAAGAAGGATTAC 59.768 37.037 0.00 0.00 0.00 1.89
614 615 7.231925 GTGTTTGGTTAGGGAAAAGAAGGATTA 59.768 37.037 0.00 0.00 0.00 1.75
615 616 6.041637 GTGTTTGGTTAGGGAAAAGAAGGATT 59.958 38.462 0.00 0.00 0.00 3.01
616 617 5.538813 GTGTTTGGTTAGGGAAAAGAAGGAT 59.461 40.000 0.00 0.00 0.00 3.24
617 618 4.891168 GTGTTTGGTTAGGGAAAAGAAGGA 59.109 41.667 0.00 0.00 0.00 3.36
618 619 4.038763 GGTGTTTGGTTAGGGAAAAGAAGG 59.961 45.833 0.00 0.00 0.00 3.46
619 620 4.038763 GGGTGTTTGGTTAGGGAAAAGAAG 59.961 45.833 0.00 0.00 0.00 2.85
620 621 3.962063 GGGTGTTTGGTTAGGGAAAAGAA 59.038 43.478 0.00 0.00 0.00 2.52
621 622 3.205733 AGGGTGTTTGGTTAGGGAAAAGA 59.794 43.478 0.00 0.00 0.00 2.52
622 623 3.572642 AGGGTGTTTGGTTAGGGAAAAG 58.427 45.455 0.00 0.00 0.00 2.27
623 624 3.568443 GAGGGTGTTTGGTTAGGGAAAA 58.432 45.455 0.00 0.00 0.00 2.29
624 625 2.158430 GGAGGGTGTTTGGTTAGGGAAA 60.158 50.000 0.00 0.00 0.00 3.13
625 626 1.426215 GGAGGGTGTTTGGTTAGGGAA 59.574 52.381 0.00 0.00 0.00 3.97
626 627 1.069775 GGAGGGTGTTTGGTTAGGGA 58.930 55.000 0.00 0.00 0.00 4.20
627 628 0.039180 GGGAGGGTGTTTGGTTAGGG 59.961 60.000 0.00 0.00 0.00 3.53
628 629 0.039180 GGGGAGGGTGTTTGGTTAGG 59.961 60.000 0.00 0.00 0.00 2.69
629 630 0.039180 GGGGGAGGGTGTTTGGTTAG 59.961 60.000 0.00 0.00 0.00 2.34
630 631 2.166274 GGGGGAGGGTGTTTGGTTA 58.834 57.895 0.00 0.00 0.00 2.85
631 632 2.940124 GGGGGAGGGTGTTTGGTT 59.060 61.111 0.00 0.00 0.00 3.67
649 650 2.583472 GGCCCACCCTGAAAATCAG 58.417 57.895 0.00 0.32 43.91 2.90
650 651 4.863415 GGCCCACCCTGAAAATCA 57.137 55.556 0.00 0.00 0.00 2.57
665 666 1.003696 GATATTAGTGGAGGCTGGGGC 59.996 57.143 0.00 0.00 37.82 5.80
666 667 1.630878 GGATATTAGTGGAGGCTGGGG 59.369 57.143 0.00 0.00 0.00 4.96
667 668 2.338809 TGGATATTAGTGGAGGCTGGG 58.661 52.381 0.00 0.00 0.00 4.45
668 669 4.647564 ATTGGATATTAGTGGAGGCTGG 57.352 45.455 0.00 0.00 0.00 4.85
669 670 5.624159 TCAATTGGATATTAGTGGAGGCTG 58.376 41.667 5.42 0.00 0.00 4.85
670 671 5.912149 TCAATTGGATATTAGTGGAGGCT 57.088 39.130 5.42 0.00 0.00 4.58
671 672 5.474876 CCTTCAATTGGATATTAGTGGAGGC 59.525 44.000 5.42 0.00 0.00 4.70
672 673 5.474876 GCCTTCAATTGGATATTAGTGGAGG 59.525 44.000 5.42 0.00 0.00 4.30
673 674 6.206243 CAGCCTTCAATTGGATATTAGTGGAG 59.794 42.308 5.42 0.00 0.00 3.86
674 675 6.064060 CAGCCTTCAATTGGATATTAGTGGA 58.936 40.000 5.42 0.00 0.00 4.02
675 676 5.278660 GCAGCCTTCAATTGGATATTAGTGG 60.279 44.000 5.42 0.00 0.00 4.00
676 677 5.278660 GGCAGCCTTCAATTGGATATTAGTG 60.279 44.000 3.29 0.00 0.00 2.74
677 678 4.829492 GGCAGCCTTCAATTGGATATTAGT 59.171 41.667 3.29 0.00 0.00 2.24
678 679 4.828939 TGGCAGCCTTCAATTGGATATTAG 59.171 41.667 14.15 0.00 0.00 1.73
679 680 4.802307 TGGCAGCCTTCAATTGGATATTA 58.198 39.130 14.15 0.00 0.00 0.98
680 681 3.645434 TGGCAGCCTTCAATTGGATATT 58.355 40.909 14.15 0.00 0.00 1.28
681 682 3.317455 TGGCAGCCTTCAATTGGATAT 57.683 42.857 14.15 0.00 0.00 1.63
682 683 2.760092 GTTGGCAGCCTTCAATTGGATA 59.240 45.455 14.15 0.00 0.00 2.59
683 684 1.551883 GTTGGCAGCCTTCAATTGGAT 59.448 47.619 14.15 0.00 0.00 3.41
684 685 0.968405 GTTGGCAGCCTTCAATTGGA 59.032 50.000 14.15 0.00 0.00 3.53
685 686 0.971386 AGTTGGCAGCCTTCAATTGG 59.029 50.000 14.15 0.00 0.00 3.16
686 687 1.614903 TGAGTTGGCAGCCTTCAATTG 59.385 47.619 14.15 0.00 0.00 2.32
687 688 1.999648 TGAGTTGGCAGCCTTCAATT 58.000 45.000 14.15 0.00 0.00 2.32
688 689 2.226962 ATGAGTTGGCAGCCTTCAAT 57.773 45.000 14.15 0.00 0.00 2.57
689 690 1.999648 AATGAGTTGGCAGCCTTCAA 58.000 45.000 14.15 0.00 0.00 2.69
690 691 1.888512 GAAATGAGTTGGCAGCCTTCA 59.111 47.619 14.15 13.98 0.00 3.02
691 692 1.888512 TGAAATGAGTTGGCAGCCTTC 59.111 47.619 14.15 6.69 0.00 3.46
692 693 1.999648 TGAAATGAGTTGGCAGCCTT 58.000 45.000 14.15 0.00 0.00 4.35
693 694 2.226962 ATGAAATGAGTTGGCAGCCT 57.773 45.000 14.15 0.00 0.00 4.58
694 695 2.733227 CGAATGAAATGAGTTGGCAGCC 60.733 50.000 3.66 3.66 0.00 4.85
695 696 2.095059 ACGAATGAAATGAGTTGGCAGC 60.095 45.455 0.00 0.00 0.00 5.25
696 697 3.837213 ACGAATGAAATGAGTTGGCAG 57.163 42.857 0.00 0.00 0.00 4.85
697 698 5.000591 TCTTACGAATGAAATGAGTTGGCA 58.999 37.500 0.00 0.00 0.00 4.92
698 699 5.545658 TCTTACGAATGAAATGAGTTGGC 57.454 39.130 0.00 0.00 0.00 4.52
722 723 8.382875 GCTACACCTACGAAAATATTTTTACGT 58.617 33.333 23.05 23.05 35.63 3.57
723 724 8.382130 TGCTACACCTACGAAAATATTTTTACG 58.618 33.333 14.45 15.49 0.00 3.18
814 818 1.832912 GATCGGAAGGTGGGATGCT 59.167 57.895 0.00 0.00 0.00 3.79
878 883 2.264166 GTCTGCTCTCTGGCGCTT 59.736 61.111 7.64 0.00 34.52 4.68
881 886 2.125753 GGTGTCTGCTCTCTGGCG 60.126 66.667 0.00 0.00 34.52 5.69
955 962 2.202892 GAATCGGAGGTGACGGCC 60.203 66.667 0.00 0.00 0.00 6.13
1002 1012 1.201429 TGAGGGAAGAAGGGAGTGCC 61.201 60.000 0.00 0.00 0.00 5.01
1374 7747 3.636282 ATAACACAGAAAAACACGGCC 57.364 42.857 0.00 0.00 0.00 6.13
1375 7748 5.567534 CACATATAACACAGAAAAACACGGC 59.432 40.000 0.00 0.00 0.00 5.68
1376 7749 5.567534 GCACATATAACACAGAAAAACACGG 59.432 40.000 0.00 0.00 0.00 4.94
1404 7777 2.695666 AGAGAAGTACATCCCATCCACG 59.304 50.000 0.00 0.00 0.00 4.94
1440 7813 2.768253 TGGTATTGCAGACTGGTGAG 57.232 50.000 4.26 0.00 0.00 3.51
1445 7818 4.380531 ACGGATAATGGTATTGCAGACTG 58.619 43.478 0.00 0.00 0.00 3.51
1544 7928 9.698309 ACGATCTATAGGTAAAATGAACAGATG 57.302 33.333 0.00 0.00 0.00 2.90
1632 8073 2.547855 TGGCAACTGCAGTACTACTGTG 60.548 50.000 22.01 13.85 42.79 3.66
1638 8079 2.276732 AACATGGCAACTGCAGTACT 57.723 45.000 22.01 1.56 44.36 2.73
1644 8085 3.436359 CCCAAATTAAACATGGCAACTGC 59.564 43.478 0.00 0.00 41.14 4.40
1685 8127 5.342806 TCACAATACTGCAGAAAAGAACG 57.657 39.130 23.35 1.61 0.00 3.95
1747 8190 3.415212 CAGGACTCCAAAATCTCAGCAA 58.585 45.455 0.00 0.00 0.00 3.91
1757 8200 5.188434 CAGAAATATCTGCAGGACTCCAAA 58.812 41.667 15.13 0.00 46.11 3.28
1771 8214 7.520292 GCTTCAGAGGCTTGATTCAGAAATATC 60.520 40.741 0.00 0.00 0.00 1.63
1793 8269 7.066766 ACCATTTCAAACTCTGATAGATGCTTC 59.933 37.037 0.00 0.00 32.78 3.86
1802 8278 5.163723 CGCATGTACCATTTCAAACTCTGAT 60.164 40.000 0.00 0.00 32.78 2.90
1844 8322 3.877508 AGCCTCAAACAGTTGTTCTACAC 59.122 43.478 0.00 0.00 37.25 2.90
1857 8335 1.155042 CAGACTGCAGAGCCTCAAAC 58.845 55.000 23.35 0.19 0.00 2.93
1859 8337 1.004080 GCAGACTGCAGAGCCTCAA 60.004 57.895 23.35 0.00 44.26 3.02
1876 8354 3.495543 GCCTCTGCTTAGTGCTGC 58.504 61.111 0.00 0.00 43.37 5.25
1893 8371 9.061435 GGAATGAGGTGATTATTAGGAAGAAAG 57.939 37.037 0.00 0.00 0.00 2.62
1950 8428 3.073798 TCAGGCACAAGGTCATAGGAAAA 59.926 43.478 0.00 0.00 0.00 2.29
2019 8515 3.512033 AGAGAATTAGTGACAGCGACC 57.488 47.619 0.00 0.00 0.00 4.79
2093 8594 6.490381 AGGGTAACATGAAAGAGAGGAAAAAC 59.510 38.462 0.00 0.00 39.74 2.43
2094 8595 6.610830 AGGGTAACATGAAAGAGAGGAAAAA 58.389 36.000 0.00 0.00 39.74 1.94
2145 8649 3.281341 TGTTTAACAGCGGCATGAAAG 57.719 42.857 1.45 0.00 0.00 2.62
2217 9498 8.086851 GGCAAAATGGCAAGTATATTAATTGG 57.913 34.615 0.00 0.00 43.14 3.16
2280 9561 7.925483 AGAAACCATCTTCGATTATCTTCTCAG 59.075 37.037 0.00 0.00 33.39 3.35
2322 9603 7.703058 CCTCAAGGTAAAGGTACATGAAAAT 57.297 36.000 0.00 0.00 31.23 1.82
2448 9729 7.599630 ACCTTCAAACGCGAATACTAATTTA 57.400 32.000 15.93 0.00 0.00 1.40
2457 9738 3.331150 TGTCATACCTTCAAACGCGAAT 58.669 40.909 15.93 0.00 0.00 3.34
2484 9765 7.745594 CGAAAATGGCCAATGTTTTCTTTTATG 59.254 33.333 27.97 15.29 38.85 1.90
2562 9844 3.146847 GGAAGGTCCGTTGAAACTGAAT 58.853 45.455 0.00 0.00 0.00 2.57
2574 9856 3.616219 TGGTCATAATTTGGAAGGTCCG 58.384 45.455 0.00 0.00 40.17 4.79
2633 9915 6.434302 TCATGGATGGTATTTTCCTGAACAT 58.566 36.000 0.00 0.00 32.95 2.71
2654 9936 6.896860 TCCCATATGTCTTTCCATGTTTTCAT 59.103 34.615 1.24 0.00 41.78 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.