Multiple sequence alignment - TraesCS7A01G177200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G177200 chr7A 100.000 3287 0 0 1 3287 130382358 130385644 0.000000e+00 6071.0
1 TraesCS7A01G177200 chr7A 84.732 1382 178 18 1365 2728 700028797 700030163 0.000000e+00 1352.0
2 TraesCS7A01G177200 chr7A 88.235 357 28 8 2725 3067 700159108 700158752 6.560000e-112 414.0
3 TraesCS7A01G177200 chr7A 90.667 300 21 5 2775 3068 225972127 225972425 3.070000e-105 392.0
4 TraesCS7A01G177200 chr7A 85.387 349 37 11 1074 1418 700045638 700045976 1.880000e-92 350.0
5 TraesCS7A01G177200 chr7A 85.780 218 24 6 197 409 130382441 130382656 1.190000e-54 224.0
6 TraesCS7A01G177200 chr7A 85.780 218 24 6 84 299 130382554 130382766 1.190000e-54 224.0
7 TraesCS7A01G177200 chr7A 85.024 207 20 4 527 726 39131852 39132054 2.000000e-47 200.0
8 TraesCS7A01G177200 chr7A 88.050 159 16 2 568 726 49058297 49058142 5.600000e-43 185.0
9 TraesCS7A01G177200 chr7B 96.517 2096 69 4 1005 3096 92959406 92961501 0.000000e+00 3463.0
10 TraesCS7A01G177200 chr7B 87.483 1502 161 21 1023 2511 697033941 697035428 0.000000e+00 1707.0
11 TraesCS7A01G177200 chr7B 83.703 1712 218 41 1050 2728 697615843 697614160 0.000000e+00 1559.0
12 TraesCS7A01G177200 chr7B 84.462 1609 199 34 1101 2675 697120269 697118678 0.000000e+00 1539.0
13 TraesCS7A01G177200 chr7B 83.202 1649 232 32 1099 2722 697422832 697424460 0.000000e+00 1469.0
14 TraesCS7A01G177200 chr7B 82.037 1659 241 35 1101 2725 695908482 695910117 0.000000e+00 1360.0
15 TraesCS7A01G177200 chr7B 84.381 493 51 14 2595 3068 685050170 685050655 8.310000e-126 460.0
16 TraesCS7A01G177200 chr7B 85.329 334 38 9 2725 3050 693406241 693405911 5.260000e-88 335.0
17 TraesCS7A01G177200 chr7B 84.012 344 22 14 2724 3055 697118606 697118284 1.920000e-77 300.0
18 TraesCS7A01G177200 chr7B 96.491 114 4 0 869 982 92645507 92645620 4.330000e-44 189.0
19 TraesCS7A01G177200 chr7B 95.455 88 2 1 3202 3287 92961497 92961584 4.420000e-29 139.0
20 TraesCS7A01G177200 chr7B 100.000 29 0 0 3259 3287 695491899 695491871 2.000000e-03 54.7
21 TraesCS7A01G177200 chr7D 97.302 1186 28 2 1220 2401 131618956 131620141 0.000000e+00 2010.0
22 TraesCS7A01G177200 chr7D 95.017 903 26 7 2396 3287 131620219 131621113 0.000000e+00 1400.0
23 TraesCS7A01G177200 chr7D 84.214 1438 200 24 1099 2514 608727515 608728947 0.000000e+00 1373.0
24 TraesCS7A01G177200 chr7D 88.611 360 13 12 869 1228 131610436 131610767 2.360000e-111 412.0
25 TraesCS7A01G177200 chr7D 87.151 358 32 4 2725 3068 609945590 609945233 8.550000e-106 394.0
26 TraesCS7A01G177200 chr7D 89.667 300 23 6 2775 3068 83293007 83292710 3.100000e-100 375.0
27 TraesCS7A01G177200 chr7D 85.329 334 38 9 2725 3050 608114764 608114434 5.260000e-88 335.0
28 TraesCS7A01G177200 chr2D 90.064 312 20 9 84 390 43796804 43797109 8.550000e-106 394.0
29 TraesCS7A01G177200 chr2D 87.537 337 27 14 84 412 440330066 440329737 3.100000e-100 375.0
30 TraesCS7A01G177200 chr2D 90.204 245 14 3 490 726 43797558 43797800 8.860000e-81 311.0
31 TraesCS7A01G177200 chr2D 90.204 245 14 3 490 726 440329258 440329016 8.860000e-81 311.0
32 TraesCS7A01G177200 chr2D 87.645 259 21 11 84 338 440329952 440329701 1.150000e-74 291.0
33 TraesCS7A01G177200 chr2D 87.259 259 22 11 84 338 43796861 43797112 5.370000e-73 285.0
34 TraesCS7A01G177200 chr2D 85.714 203 19 8 84 283 440329896 440329701 4.300000e-49 206.0
35 TraesCS7A01G177200 chr2D 85.000 200 20 8 84 280 43796917 43797109 9.310000e-46 195.0
36 TraesCS7A01G177200 chr2D 100.000 40 0 0 413 452 43797522 43797561 1.260000e-09 75.0
37 TraesCS7A01G177200 chr2D 100.000 40 0 0 413 452 440329294 440329255 1.260000e-09 75.0
38 TraesCS7A01G177200 chr6A 90.000 300 23 5 2775 3068 252108675 252108377 6.660000e-102 381.0
39 TraesCS7A01G177200 chr4D 85.013 387 43 7 2343 2726 480556209 480555835 2.390000e-101 379.0
40 TraesCS7A01G177200 chr4D 84.755 387 44 7 2343 2726 63120262 63119888 1.110000e-99 374.0
41 TraesCS7A01G177200 chr4D 84.496 387 45 7 2343 2726 45116391 45116017 5.180000e-98 368.0
42 TraesCS7A01G177200 chr3D 85.013 387 43 7 2343 2726 36183848 36183474 2.390000e-101 379.0
43 TraesCS7A01G177200 chr1D 85.013 387 43 7 2343 2726 353386523 353386897 2.390000e-101 379.0
44 TraesCS7A01G177200 chr1D 84.755 387 44 7 2343 2726 452138021 452137647 1.110000e-99 374.0
45 TraesCS7A01G177200 chr1D 86.851 289 23 11 419 697 364028789 364029072 3.190000e-80 309.0
46 TraesCS7A01G177200 chr6D 84.337 415 32 18 1 387 356735509 356735100 3.100000e-100 375.0
47 TraesCS7A01G177200 chr6D 84.755 387 44 7 2343 2726 51607895 51607521 1.110000e-99 374.0
48 TraesCS7A01G177200 chr6D 86.047 258 26 9 161 412 356735437 356735184 5.410000e-68 268.0
49 TraesCS7A01G177200 chr6D 88.435 147 13 3 582 726 310389572 310389428 1.210000e-39 174.0
50 TraesCS7A01G177200 chr1B 86.957 322 24 11 105 409 492863948 492864268 2.430000e-91 346.0
51 TraesCS7A01G177200 chr1B 82.009 428 33 23 1 387 492863876 492864300 1.140000e-84 324.0
52 TraesCS7A01G177200 chr5D 91.837 245 10 3 490 726 36210748 36210990 1.890000e-87 333.0
53 TraesCS7A01G177200 chr5D 83.183 333 23 17 84 409 36209957 36210263 1.160000e-69 274.0
54 TraesCS7A01G177200 chr5D 97.500 40 1 0 413 452 36210712 36210751 5.890000e-08 69.4
55 TraesCS7A01G177200 chr1A 84.058 207 22 5 527 726 481676362 481676160 4.330000e-44 189.0
56 TraesCS7A01G177200 chr2A 88.591 149 12 4 581 726 705552441 705552295 3.370000e-40 176.0
57 TraesCS7A01G177200 chr2A 76.596 329 62 11 1105 1420 758713376 758713050 2.030000e-37 167.0
58 TraesCS7A01G177200 chr5A 100.000 29 0 0 291 319 306972606 306972634 2.000000e-03 54.7
59 TraesCS7A01G177200 chrUn 100.000 28 0 0 3260 3287 77782592 77782619 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G177200 chr7A 130382358 130385644 3286 False 2173.000000 6071 90.5200 1 3287 3 chr7A.!!$F5 3286
1 TraesCS7A01G177200 chr7A 700028797 700030163 1366 False 1352.000000 1352 84.7320 1365 2728 1 chr7A.!!$F3 1363
2 TraesCS7A01G177200 chr7B 92959406 92961584 2178 False 1801.000000 3463 95.9860 1005 3287 2 chr7B.!!$F6 2282
3 TraesCS7A01G177200 chr7B 697033941 697035428 1487 False 1707.000000 1707 87.4830 1023 2511 1 chr7B.!!$F4 1488
4 TraesCS7A01G177200 chr7B 697614160 697615843 1683 True 1559.000000 1559 83.7030 1050 2728 1 chr7B.!!$R3 1678
5 TraesCS7A01G177200 chr7B 697422832 697424460 1628 False 1469.000000 1469 83.2020 1099 2722 1 chr7B.!!$F5 1623
6 TraesCS7A01G177200 chr7B 695908482 695910117 1635 False 1360.000000 1360 82.0370 1101 2725 1 chr7B.!!$F3 1624
7 TraesCS7A01G177200 chr7B 697118284 697120269 1985 True 919.500000 1539 84.2370 1101 3055 2 chr7B.!!$R4 1954
8 TraesCS7A01G177200 chr7D 131618956 131621113 2157 False 1705.000000 2010 96.1595 1220 3287 2 chr7D.!!$F3 2067
9 TraesCS7A01G177200 chr7D 608727515 608728947 1432 False 1373.000000 1373 84.2140 1099 2514 1 chr7D.!!$F2 1415
10 TraesCS7A01G177200 chr2D 43796804 43797800 996 False 252.000000 394 90.5054 84 726 5 chr2D.!!$F1 642
11 TraesCS7A01G177200 chr2D 440329016 440330066 1050 True 251.600000 375 90.2200 84 726 5 chr2D.!!$R1 642
12 TraesCS7A01G177200 chr5D 36209957 36210990 1033 False 225.466667 333 90.8400 84 726 3 chr5D.!!$F1 642

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
854 1315 0.029834 GCAACCTGCCGATAATGCTG 59.970 55.0 0.00 0.0 37.42 4.41 F
958 1419 0.179153 GCCCAGCGCAGAGAAAAATC 60.179 55.0 11.47 0.0 37.47 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1665 2148 0.251077 AGAAGACAAAGGCAGCCAGG 60.251 55.000 15.8 4.71 0.0 4.45 R
2894 3567 1.065491 TCAGTTGCCCGTGATAAGCAT 60.065 47.619 0.0 0.00 36.2 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.098355 TGTAATTCCATCATTTCTTTACTCTCG 57.902 33.333 0.00 0.00 0.00 4.04
32 33 9.314321 GTAATTCCATCATTTCTTTACTCTCGA 57.686 33.333 0.00 0.00 0.00 4.04
33 34 8.792830 AATTCCATCATTTCTTTACTCTCGAA 57.207 30.769 0.00 0.00 0.00 3.71
34 35 8.970859 ATTCCATCATTTCTTTACTCTCGAAT 57.029 30.769 0.00 0.00 0.00 3.34
35 36 8.792830 TTCCATCATTTCTTTACTCTCGAATT 57.207 30.769 0.00 0.00 0.00 2.17
36 37 8.792830 TCCATCATTTCTTTACTCTCGAATTT 57.207 30.769 0.00 0.00 0.00 1.82
37 38 9.884636 TCCATCATTTCTTTACTCTCGAATTTA 57.115 29.630 0.00 0.00 0.00 1.40
41 42 9.109393 TCATTTCTTTACTCTCGAATTTATGGG 57.891 33.333 0.00 0.00 0.00 4.00
42 43 9.109393 CATTTCTTTACTCTCGAATTTATGGGA 57.891 33.333 0.00 0.00 0.00 4.37
43 44 9.853177 ATTTCTTTACTCTCGAATTTATGGGAT 57.147 29.630 0.00 0.00 0.00 3.85
44 45 9.681062 TTTCTTTACTCTCGAATTTATGGGATT 57.319 29.630 0.00 0.00 0.00 3.01
45 46 9.681062 TTCTTTACTCTCGAATTTATGGGATTT 57.319 29.630 0.00 0.00 0.00 2.17
46 47 9.681062 TCTTTACTCTCGAATTTATGGGATTTT 57.319 29.630 0.00 0.00 0.00 1.82
70 71 7.589958 TTTTACCAAATTTCTAGGTGCAAGA 57.410 32.000 8.56 0.00 36.87 3.02
71 72 6.569179 TTACCAAATTTCTAGGTGCAAGAC 57.431 37.500 8.56 0.00 36.87 3.01
72 73 4.729868 ACCAAATTTCTAGGTGCAAGACT 58.270 39.130 0.00 0.00 33.57 3.24
73 74 5.876357 ACCAAATTTCTAGGTGCAAGACTA 58.124 37.500 0.00 0.00 33.57 2.59
74 75 5.940470 ACCAAATTTCTAGGTGCAAGACTAG 59.060 40.000 12.69 12.69 38.38 2.57
75 76 5.940470 CCAAATTTCTAGGTGCAAGACTAGT 59.060 40.000 16.41 0.00 38.24 2.57
76 77 6.431234 CCAAATTTCTAGGTGCAAGACTAGTT 59.569 38.462 16.41 5.89 38.24 2.24
77 78 7.040409 CCAAATTTCTAGGTGCAAGACTAGTTT 60.040 37.037 16.41 9.99 38.24 2.66
78 79 8.999431 CAAATTTCTAGGTGCAAGACTAGTTTA 58.001 33.333 16.41 7.65 38.24 2.01
79 80 8.549338 AATTTCTAGGTGCAAGACTAGTTTAC 57.451 34.615 16.41 0.00 38.24 2.01
80 81 6.659745 TTCTAGGTGCAAGACTAGTTTACA 57.340 37.500 16.41 0.00 38.24 2.41
81 82 6.852420 TCTAGGTGCAAGACTAGTTTACAT 57.148 37.500 16.41 0.00 38.24 2.29
82 83 6.631016 TCTAGGTGCAAGACTAGTTTACATG 58.369 40.000 16.41 0.00 38.24 3.21
118 176 9.131791 ACTGGAATTTTTGACTAGTTTACATGT 57.868 29.630 2.69 2.69 0.00 3.21
119 177 9.398170 CTGGAATTTTTGACTAGTTTACATGTG 57.602 33.333 9.11 0.00 0.00 3.21
138 196 8.635765 ACATGTGGATTTACACTGTAATTTCT 57.364 30.769 0.00 0.00 41.84 2.52
139 197 9.733556 ACATGTGGATTTACACTGTAATTTCTA 57.266 29.630 0.00 0.00 41.84 2.10
187 246 6.850752 AGTTTAAATGGGGATTTACACTGG 57.149 37.500 0.00 0.00 36.34 4.00
190 249 7.678171 AGTTTAAATGGGGATTTACACTGGAAT 59.322 33.333 0.00 0.00 36.34 3.01
207 266 5.480422 ACTGGAATTTTCTGGGATTTACACC 59.520 40.000 0.00 0.00 0.00 4.16
215 274 4.668636 TCTGGGATTTACACCGGAATTTT 58.331 39.130 9.46 0.00 39.14 1.82
216 275 5.081032 TCTGGGATTTACACCGGAATTTTT 58.919 37.500 9.46 0.00 39.14 1.94
217 276 5.047660 TCTGGGATTTACACCGGAATTTTTG 60.048 40.000 9.46 0.00 39.14 2.44
218 277 4.833380 TGGGATTTACACCGGAATTTTTGA 59.167 37.500 9.46 0.00 0.00 2.69
219 278 5.165676 GGGATTTACACCGGAATTTTTGAC 58.834 41.667 9.46 0.00 0.00 3.18
220 279 5.047590 GGGATTTACACCGGAATTTTTGACT 60.048 40.000 9.46 0.00 0.00 3.41
221 280 6.151480 GGGATTTACACCGGAATTTTTGACTA 59.849 38.462 9.46 0.00 0.00 2.59
222 281 7.248437 GGATTTACACCGGAATTTTTGACTAG 58.752 38.462 9.46 0.00 0.00 2.57
241 300 7.691213 TGACTAGTTTACATGGGGATTTACAA 58.309 34.615 0.00 0.00 0.00 2.41
254 313 8.429237 TGGGGATTTACAATGTAATTTTCTGT 57.571 30.769 6.67 0.00 31.22 3.41
257 316 9.353999 GGGATTTACAATGTAATTTTCTGTGAC 57.646 33.333 6.67 0.00 31.22 3.67
310 369 9.762381 AATGGGGATTTACACTGTAATTTTCTA 57.238 29.630 2.41 0.00 0.00 2.10
335 394 6.209391 AGGATTTACACTGAAAATTGACTGGG 59.791 38.462 0.00 0.00 0.00 4.45
345 404 5.835819 TGAAAATTGACTGGGTTTACATGGA 59.164 36.000 0.00 0.00 0.00 3.41
409 588 6.420638 ACTAGTTTACATGGGGATTTACACC 58.579 40.000 0.00 0.00 43.64 4.16
452 905 4.324254 CCCAGATTTGTTCTAGCCCTGTTA 60.324 45.833 0.00 0.00 31.77 2.41
453 906 4.878397 CCAGATTTGTTCTAGCCCTGTTAG 59.122 45.833 0.00 0.00 31.77 2.34
454 907 4.878397 CAGATTTGTTCTAGCCCTGTTAGG 59.122 45.833 0.00 0.00 31.77 2.69
455 908 4.536489 AGATTTGTTCTAGCCCTGTTAGGT 59.464 41.667 0.00 0.00 29.61 3.08
456 909 3.695830 TTGTTCTAGCCCTGTTAGGTG 57.304 47.619 0.00 0.00 31.93 4.00
457 910 2.897350 TGTTCTAGCCCTGTTAGGTGA 58.103 47.619 0.00 0.00 31.93 4.02
458 911 2.832129 TGTTCTAGCCCTGTTAGGTGAG 59.168 50.000 0.00 0.00 31.93 3.51
459 912 3.097614 GTTCTAGCCCTGTTAGGTGAGA 58.902 50.000 0.00 0.00 31.93 3.27
460 913 3.689872 TCTAGCCCTGTTAGGTGAGAT 57.310 47.619 0.00 0.00 31.93 2.75
461 914 3.567397 TCTAGCCCTGTTAGGTGAGATC 58.433 50.000 0.00 0.00 31.93 2.75
462 915 2.559381 AGCCCTGTTAGGTGAGATCT 57.441 50.000 0.00 0.00 31.93 2.75
463 916 2.114616 AGCCCTGTTAGGTGAGATCTG 58.885 52.381 0.00 0.00 31.93 2.90
464 917 1.834263 GCCCTGTTAGGTGAGATCTGT 59.166 52.381 0.00 0.00 31.93 3.41
465 918 2.159028 GCCCTGTTAGGTGAGATCTGTC 60.159 54.545 0.00 0.00 31.93 3.51
466 919 3.370104 CCCTGTTAGGTGAGATCTGTCT 58.630 50.000 0.00 0.00 33.00 3.41
467 920 4.537751 CCCTGTTAGGTGAGATCTGTCTA 58.462 47.826 0.00 0.00 31.23 2.59
468 921 4.582656 CCCTGTTAGGTGAGATCTGTCTAG 59.417 50.000 0.00 0.00 31.23 2.43
469 922 5.197451 CCTGTTAGGTGAGATCTGTCTAGT 58.803 45.833 0.00 0.00 33.97 2.57
470 923 5.067153 CCTGTTAGGTGAGATCTGTCTAGTG 59.933 48.000 0.00 0.00 33.97 2.74
471 924 4.950475 TGTTAGGTGAGATCTGTCTAGTGG 59.050 45.833 0.00 0.00 33.97 4.00
472 925 3.748645 AGGTGAGATCTGTCTAGTGGT 57.251 47.619 0.00 0.00 33.97 4.16
473 926 4.054359 AGGTGAGATCTGTCTAGTGGTT 57.946 45.455 0.00 0.00 33.97 3.67
474 927 3.766591 AGGTGAGATCTGTCTAGTGGTTG 59.233 47.826 0.00 0.00 33.97 3.77
475 928 3.764434 GGTGAGATCTGTCTAGTGGTTGA 59.236 47.826 0.00 0.00 33.97 3.18
476 929 4.142271 GGTGAGATCTGTCTAGTGGTTGAG 60.142 50.000 0.00 0.00 33.97 3.02
477 930 4.019858 TGAGATCTGTCTAGTGGTTGAGG 58.980 47.826 0.00 0.00 33.97 3.86
478 931 3.370104 AGATCTGTCTAGTGGTTGAGGG 58.630 50.000 0.00 0.00 31.36 4.30
479 932 1.938585 TCTGTCTAGTGGTTGAGGGG 58.061 55.000 0.00 0.00 0.00 4.79
480 933 0.905357 CTGTCTAGTGGTTGAGGGGG 59.095 60.000 0.00 0.00 0.00 5.40
503 956 1.527380 GGCGTGTTTTGTGGAGGGA 60.527 57.895 0.00 0.00 0.00 4.20
504 957 0.893727 GGCGTGTTTTGTGGAGGGAT 60.894 55.000 0.00 0.00 0.00 3.85
512 965 2.879103 TTGTGGAGGGATTTGGTCTC 57.121 50.000 0.00 0.00 0.00 3.36
527 980 2.127496 CTCTGCGTGCGTTGCAAG 60.127 61.111 0.00 0.24 42.70 4.01
554 1007 0.754217 GCATGTGCCATGTGATCCCT 60.754 55.000 14.21 0.00 34.31 4.20
555 1008 1.029681 CATGTGCCATGTGATCCCTG 58.970 55.000 6.93 0.00 0.00 4.45
556 1009 0.921166 ATGTGCCATGTGATCCCTGA 59.079 50.000 0.00 0.00 0.00 3.86
557 1010 0.921166 TGTGCCATGTGATCCCTGAT 59.079 50.000 0.00 0.00 0.00 2.90
584 1045 1.070105 TTTGTCCAGGACGAACCGG 59.930 57.895 17.47 0.00 44.74 5.28
612 1073 0.036483 TTTACCCGACCCGTTTAGGC 60.036 55.000 0.00 0.00 39.21 3.93
625 1086 2.223377 CGTTTAGGCGCTCTTTTCTGTT 59.777 45.455 7.64 0.00 0.00 3.16
626 1087 3.303791 CGTTTAGGCGCTCTTTTCTGTTT 60.304 43.478 7.64 0.00 0.00 2.83
674 1135 6.003326 ACAGATGTATTGTGTTGATTGGTCA 58.997 36.000 0.00 0.00 0.00 4.02
738 1199 8.854614 GTCAAATAGACAGAATATATGGCCTT 57.145 34.615 3.32 0.00 46.77 4.35
739 1200 9.289782 GTCAAATAGACAGAATATATGGCCTTT 57.710 33.333 3.32 0.00 46.77 3.11
740 1201 9.288576 TCAAATAGACAGAATATATGGCCTTTG 57.711 33.333 3.32 0.19 33.38 2.77
741 1202 9.288576 CAAATAGACAGAATATATGGCCTTTGA 57.711 33.333 3.32 0.00 33.68 2.69
742 1203 9.866655 AAATAGACAGAATATATGGCCTTTGAA 57.133 29.630 3.32 0.00 0.00 2.69
743 1204 8.854614 ATAGACAGAATATATGGCCTTTGAAC 57.145 34.615 3.32 0.00 0.00 3.18
744 1205 5.760253 AGACAGAATATATGGCCTTTGAACG 59.240 40.000 3.32 0.00 0.00 3.95
745 1206 4.275936 ACAGAATATATGGCCTTTGAACGC 59.724 41.667 3.32 0.00 0.00 4.84
746 1207 4.275689 CAGAATATATGGCCTTTGAACGCA 59.724 41.667 3.32 0.00 0.00 5.24
747 1208 4.275936 AGAATATATGGCCTTTGAACGCAC 59.724 41.667 3.32 0.00 0.00 5.34
748 1209 1.832883 ATATGGCCTTTGAACGCACA 58.167 45.000 3.32 0.00 0.00 4.57
749 1210 0.878416 TATGGCCTTTGAACGCACAC 59.122 50.000 3.32 0.00 0.00 3.82
751 1212 2.725815 GCCTTTGAACGCACACGC 60.726 61.111 0.00 0.00 45.53 5.34
752 1213 2.712539 CCTTTGAACGCACACGCA 59.287 55.556 0.00 0.00 45.53 5.24
753 1214 1.063327 CCTTTGAACGCACACGCAA 59.937 52.632 0.00 0.00 45.53 4.85
754 1215 0.524392 CCTTTGAACGCACACGCAAA 60.524 50.000 0.00 0.00 45.53 3.68
755 1216 0.565679 CTTTGAACGCACACGCAAAC 59.434 50.000 0.00 0.00 45.53 2.93
756 1217 0.109735 TTTGAACGCACACGCAAACA 60.110 45.000 0.00 0.00 45.53 2.83
757 1218 0.109735 TTGAACGCACACGCAAACAA 60.110 45.000 0.00 0.00 45.53 2.83
758 1219 0.109735 TGAACGCACACGCAAACAAA 60.110 45.000 0.00 0.00 45.53 2.83
759 1220 0.565679 GAACGCACACGCAAACAAAG 59.434 50.000 0.00 0.00 45.53 2.77
760 1221 0.169230 AACGCACACGCAAACAAAGA 59.831 45.000 0.00 0.00 45.53 2.52
761 1222 0.169230 ACGCACACGCAAACAAAGAA 59.831 45.000 0.00 0.00 45.53 2.52
762 1223 0.839477 CGCACACGCAAACAAAGAAG 59.161 50.000 0.00 0.00 38.40 2.85
763 1224 1.199624 GCACACGCAAACAAAGAAGG 58.800 50.000 0.00 0.00 38.36 3.46
764 1225 1.469079 GCACACGCAAACAAAGAAGGT 60.469 47.619 0.00 0.00 38.36 3.50
765 1226 2.874849 CACACGCAAACAAAGAAGGTT 58.125 42.857 0.00 0.00 0.00 3.50
766 1227 2.851824 CACACGCAAACAAAGAAGGTTC 59.148 45.455 0.00 0.00 0.00 3.62
767 1228 2.490115 ACACGCAAACAAAGAAGGTTCA 59.510 40.909 0.00 0.00 0.00 3.18
768 1229 3.130340 ACACGCAAACAAAGAAGGTTCAT 59.870 39.130 0.00 0.00 0.00 2.57
769 1230 3.486841 CACGCAAACAAAGAAGGTTCATG 59.513 43.478 0.00 0.00 0.00 3.07
770 1231 3.052036 CGCAAACAAAGAAGGTTCATGG 58.948 45.455 0.00 0.00 0.00 3.66
771 1232 3.243367 CGCAAACAAAGAAGGTTCATGGA 60.243 43.478 0.00 0.00 0.00 3.41
772 1233 4.301628 GCAAACAAAGAAGGTTCATGGAG 58.698 43.478 0.00 0.00 0.00 3.86
773 1234 4.301628 CAAACAAAGAAGGTTCATGGAGC 58.698 43.478 0.00 0.00 0.00 4.70
774 1235 3.515602 ACAAAGAAGGTTCATGGAGCT 57.484 42.857 0.00 0.00 0.00 4.09
775 1236 4.640771 ACAAAGAAGGTTCATGGAGCTA 57.359 40.909 6.03 0.00 0.00 3.32
776 1237 5.184892 ACAAAGAAGGTTCATGGAGCTAT 57.815 39.130 6.03 0.00 0.00 2.97
777 1238 5.574188 ACAAAGAAGGTTCATGGAGCTATT 58.426 37.500 6.03 1.94 0.00 1.73
778 1239 6.012745 ACAAAGAAGGTTCATGGAGCTATTT 58.987 36.000 6.03 8.17 0.00 1.40
779 1240 6.494835 ACAAAGAAGGTTCATGGAGCTATTTT 59.505 34.615 6.03 7.48 0.00 1.82
780 1241 6.521151 AAGAAGGTTCATGGAGCTATTTTG 57.479 37.500 6.03 0.00 0.00 2.44
781 1242 5.574188 AGAAGGTTCATGGAGCTATTTTGT 58.426 37.500 6.03 0.00 0.00 2.83
782 1243 6.012745 AGAAGGTTCATGGAGCTATTTTGTT 58.987 36.000 6.03 0.00 0.00 2.83
783 1244 6.494835 AGAAGGTTCATGGAGCTATTTTGTTT 59.505 34.615 6.03 0.00 0.00 2.83
784 1245 6.670695 AGGTTCATGGAGCTATTTTGTTTT 57.329 33.333 3.16 0.00 0.00 2.43
785 1246 7.775053 AGGTTCATGGAGCTATTTTGTTTTA 57.225 32.000 3.16 0.00 0.00 1.52
786 1247 8.366359 AGGTTCATGGAGCTATTTTGTTTTAT 57.634 30.769 3.16 0.00 0.00 1.40
787 1248 8.253113 AGGTTCATGGAGCTATTTTGTTTTATG 58.747 33.333 3.16 0.00 0.00 1.90
788 1249 7.492344 GGTTCATGGAGCTATTTTGTTTTATGG 59.508 37.037 0.00 0.00 0.00 2.74
789 1250 7.111247 TCATGGAGCTATTTTGTTTTATGGG 57.889 36.000 0.00 0.00 0.00 4.00
790 1251 5.930837 TGGAGCTATTTTGTTTTATGGGG 57.069 39.130 0.00 0.00 0.00 4.96
791 1252 5.584913 TGGAGCTATTTTGTTTTATGGGGA 58.415 37.500 0.00 0.00 0.00 4.81
792 1253 6.019748 TGGAGCTATTTTGTTTTATGGGGAA 58.980 36.000 0.00 0.00 0.00 3.97
793 1254 6.154363 TGGAGCTATTTTGTTTTATGGGGAAG 59.846 38.462 0.00 0.00 0.00 3.46
794 1255 6.406961 GGAGCTATTTTGTTTTATGGGGAAGG 60.407 42.308 0.00 0.00 0.00 3.46
795 1256 6.022958 AGCTATTTTGTTTTATGGGGAAGGT 58.977 36.000 0.00 0.00 0.00 3.50
796 1257 6.500400 AGCTATTTTGTTTTATGGGGAAGGTT 59.500 34.615 0.00 0.00 0.00 3.50
797 1258 6.816640 GCTATTTTGTTTTATGGGGAAGGTTC 59.183 38.462 0.00 0.00 0.00 3.62
798 1259 4.857509 TTTGTTTTATGGGGAAGGTTCG 57.142 40.909 0.00 0.00 0.00 3.95
799 1260 3.512219 TGTTTTATGGGGAAGGTTCGT 57.488 42.857 0.00 0.00 0.00 3.85
800 1261 4.637387 TGTTTTATGGGGAAGGTTCGTA 57.363 40.909 0.00 0.00 0.00 3.43
801 1262 4.581868 TGTTTTATGGGGAAGGTTCGTAG 58.418 43.478 0.00 0.00 0.00 3.51
802 1263 4.286549 TGTTTTATGGGGAAGGTTCGTAGA 59.713 41.667 0.00 0.00 0.00 2.59
803 1264 4.748277 TTTATGGGGAAGGTTCGTAGAG 57.252 45.455 0.00 0.00 38.43 2.43
804 1265 2.544844 ATGGGGAAGGTTCGTAGAGA 57.455 50.000 0.00 0.00 38.43 3.10
805 1266 2.544844 TGGGGAAGGTTCGTAGAGAT 57.455 50.000 0.00 0.00 38.43 2.75
806 1267 3.675348 TGGGGAAGGTTCGTAGAGATA 57.325 47.619 0.00 0.00 38.43 1.98
807 1268 3.985127 TGGGGAAGGTTCGTAGAGATAA 58.015 45.455 0.00 0.00 38.43 1.75
808 1269 4.355549 TGGGGAAGGTTCGTAGAGATAAA 58.644 43.478 0.00 0.00 38.43 1.40
809 1270 4.966805 TGGGGAAGGTTCGTAGAGATAAAT 59.033 41.667 0.00 0.00 38.43 1.40
810 1271 5.070047 TGGGGAAGGTTCGTAGAGATAAATC 59.930 44.000 0.00 0.00 38.43 2.17
811 1272 5.511031 GGGGAAGGTTCGTAGAGATAAATCC 60.511 48.000 0.00 0.00 38.43 3.01
812 1273 5.304871 GGGAAGGTTCGTAGAGATAAATCCT 59.695 44.000 0.00 0.00 38.43 3.24
813 1274 6.217294 GGAAGGTTCGTAGAGATAAATCCTG 58.783 44.000 0.00 0.00 38.43 3.86
814 1275 5.793030 AGGTTCGTAGAGATAAATCCTGG 57.207 43.478 0.00 0.00 38.43 4.45
815 1276 5.455872 AGGTTCGTAGAGATAAATCCTGGA 58.544 41.667 0.00 0.00 38.43 3.86
816 1277 5.302313 AGGTTCGTAGAGATAAATCCTGGAC 59.698 44.000 0.00 0.00 38.43 4.02
817 1278 5.302313 GGTTCGTAGAGATAAATCCTGGACT 59.698 44.000 0.00 0.00 38.43 3.85
818 1279 6.440436 GTTCGTAGAGATAAATCCTGGACTC 58.560 44.000 0.00 0.34 38.43 3.36
819 1280 5.942961 TCGTAGAGATAAATCCTGGACTCT 58.057 41.667 15.53 15.53 38.15 3.24
820 1281 6.366340 TCGTAGAGATAAATCCTGGACTCTT 58.634 40.000 16.19 6.05 36.39 2.85
821 1282 6.834451 TCGTAGAGATAAATCCTGGACTCTTT 59.166 38.462 16.19 8.59 36.39 2.52
822 1283 7.342284 TCGTAGAGATAAATCCTGGACTCTTTT 59.658 37.037 16.19 8.28 36.39 2.27
823 1284 7.982354 CGTAGAGATAAATCCTGGACTCTTTTT 59.018 37.037 16.19 7.96 36.39 1.94
853 1314 2.408333 GCAACCTGCCGATAATGCT 58.592 52.632 0.00 0.00 37.42 3.79
854 1315 0.029834 GCAACCTGCCGATAATGCTG 59.970 55.000 0.00 0.00 37.42 4.41
858 1319 3.694364 CTGCCGATAATGCTGGACT 57.306 52.632 0.00 0.00 0.00 3.85
859 1320 2.820059 CTGCCGATAATGCTGGACTA 57.180 50.000 0.00 0.00 0.00 2.59
860 1321 2.681706 CTGCCGATAATGCTGGACTAG 58.318 52.381 0.00 0.00 0.00 2.57
861 1322 2.036475 CTGCCGATAATGCTGGACTAGT 59.964 50.000 0.00 0.00 0.00 2.57
862 1323 2.434336 TGCCGATAATGCTGGACTAGTT 59.566 45.455 0.00 0.00 0.00 2.24
863 1324 3.118408 TGCCGATAATGCTGGACTAGTTT 60.118 43.478 0.00 0.00 0.00 2.66
864 1325 3.495001 GCCGATAATGCTGGACTAGTTTC 59.505 47.826 0.00 0.00 0.00 2.78
865 1326 4.693283 CCGATAATGCTGGACTAGTTTCA 58.307 43.478 0.00 0.00 0.00 2.69
866 1327 5.116180 CCGATAATGCTGGACTAGTTTCAA 58.884 41.667 0.00 0.00 0.00 2.69
867 1328 5.584649 CCGATAATGCTGGACTAGTTTCAAA 59.415 40.000 0.00 0.00 0.00 2.69
868 1329 6.093495 CCGATAATGCTGGACTAGTTTCAAAA 59.907 38.462 0.00 0.00 0.00 2.44
869 1330 7.361713 CCGATAATGCTGGACTAGTTTCAAAAA 60.362 37.037 0.00 0.00 0.00 1.94
870 1331 7.481798 CGATAATGCTGGACTAGTTTCAAAAAC 59.518 37.037 0.00 0.00 0.00 2.43
871 1332 6.715347 AATGCTGGACTAGTTTCAAAAACT 57.285 33.333 9.75 9.75 0.00 2.66
872 1333 6.715347 ATGCTGGACTAGTTTCAAAAACTT 57.285 33.333 10.08 0.00 0.00 2.66
873 1334 6.524101 TGCTGGACTAGTTTCAAAAACTTT 57.476 33.333 10.08 0.00 0.00 2.66
874 1335 6.560711 TGCTGGACTAGTTTCAAAAACTTTC 58.439 36.000 10.08 7.56 0.00 2.62
875 1336 6.151985 TGCTGGACTAGTTTCAAAAACTTTCA 59.848 34.615 10.08 0.00 0.00 2.69
876 1337 6.693113 GCTGGACTAGTTTCAAAAACTTTCAG 59.307 38.462 10.08 8.68 0.00 3.02
877 1338 6.560711 TGGACTAGTTTCAAAAACTTTCAGC 58.439 36.000 10.08 0.70 0.00 4.26
878 1339 6.377146 TGGACTAGTTTCAAAAACTTTCAGCT 59.623 34.615 10.08 0.00 0.00 4.24
879 1340 7.093945 TGGACTAGTTTCAAAAACTTTCAGCTT 60.094 33.333 10.08 0.00 0.00 3.74
880 1341 7.759886 GGACTAGTTTCAAAAACTTTCAGCTTT 59.240 33.333 10.08 0.00 0.00 3.51
881 1342 8.466086 ACTAGTTTCAAAAACTTTCAGCTTTG 57.534 30.769 10.08 0.00 0.00 2.77
882 1343 8.088365 ACTAGTTTCAAAAACTTTCAGCTTTGT 58.912 29.630 10.08 0.00 32.00 2.83
883 1344 9.567848 CTAGTTTCAAAAACTTTCAGCTTTGTA 57.432 29.630 10.08 0.00 32.00 2.41
884 1345 8.239681 AGTTTCAAAAACTTTCAGCTTTGTAC 57.760 30.769 0.00 0.00 32.00 2.90
885 1346 8.088365 AGTTTCAAAAACTTTCAGCTTTGTACT 58.912 29.630 0.00 0.00 32.00 2.73
886 1347 8.708742 GTTTCAAAAACTTTCAGCTTTGTACTT 58.291 29.630 0.00 0.00 32.00 2.24
887 1348 7.810766 TCAAAAACTTTCAGCTTTGTACTTG 57.189 32.000 0.00 0.00 32.00 3.16
888 1349 6.310224 TCAAAAACTTTCAGCTTTGTACTTGC 59.690 34.615 0.00 0.00 32.00 4.01
889 1350 5.582689 AAACTTTCAGCTTTGTACTTGCT 57.417 34.783 0.00 0.00 37.56 3.91
893 1354 2.646121 AGCTTTGTACTTGCTGGGC 58.354 52.632 6.95 0.00 35.54 5.36
894 1355 0.895559 AGCTTTGTACTTGCTGGGCC 60.896 55.000 0.00 0.00 35.54 5.80
895 1356 1.877576 GCTTTGTACTTGCTGGGCCC 61.878 60.000 17.59 17.59 0.00 5.80
896 1357 1.586154 CTTTGTACTTGCTGGGCCCG 61.586 60.000 19.37 13.51 0.00 6.13
897 1358 4.715523 TGTACTTGCTGGGCCCGC 62.716 66.667 25.78 25.78 0.00 6.13
902 1363 4.053871 TTGCTGGGCCCGCCATTA 62.054 61.111 28.18 12.60 37.98 1.90
903 1364 4.813235 TGCTGGGCCCGCCATTAC 62.813 66.667 28.18 10.08 37.98 1.89
909 1370 4.476752 GCCCGCCATTACCGGTGA 62.477 66.667 19.93 10.28 44.13 4.02
910 1371 2.269562 CCCGCCATTACCGGTGAA 59.730 61.111 19.93 8.18 44.13 3.18
911 1372 1.817941 CCCGCCATTACCGGTGAAG 60.818 63.158 19.93 5.87 44.13 3.02
912 1373 2.469516 CCGCCATTACCGGTGAAGC 61.470 63.158 19.93 15.71 40.84 3.86
913 1374 2.469516 CGCCATTACCGGTGAAGCC 61.470 63.158 19.93 0.00 38.98 4.35
914 1375 1.377987 GCCATTACCGGTGAAGCCA 60.378 57.895 19.93 0.00 36.97 4.75
915 1376 1.654023 GCCATTACCGGTGAAGCCAC 61.654 60.000 19.93 0.00 42.46 5.01
916 1377 0.322098 CCATTACCGGTGAAGCCACA 60.322 55.000 19.93 0.00 44.93 4.17
917 1378 1.681780 CCATTACCGGTGAAGCCACAT 60.682 52.381 19.93 0.00 44.93 3.21
918 1379 2.091541 CATTACCGGTGAAGCCACATT 58.908 47.619 19.93 0.00 44.93 2.71
919 1380 2.279935 TTACCGGTGAAGCCACATTT 57.720 45.000 19.93 0.00 44.93 2.32
920 1381 1.529226 TACCGGTGAAGCCACATTTG 58.471 50.000 19.93 0.00 44.93 2.32
921 1382 1.178534 ACCGGTGAAGCCACATTTGG 61.179 55.000 6.12 0.00 44.93 3.28
922 1383 1.586028 CGGTGAAGCCACATTTGGG 59.414 57.895 0.00 0.00 44.93 4.12
930 1391 2.658422 CACATTTGGGCTGTGGGC 59.342 61.111 0.00 0.00 40.23 5.36
931 1392 2.200930 ACATTTGGGCTGTGGGCA 59.799 55.556 0.00 0.00 44.01 5.36
932 1393 1.909781 ACATTTGGGCTGTGGGCAG 60.910 57.895 0.00 0.00 45.23 4.85
954 1415 2.359107 CAGCCCAGCGCAGAGAAA 60.359 61.111 11.47 0.00 41.38 2.52
955 1416 1.968017 CAGCCCAGCGCAGAGAAAA 60.968 57.895 11.47 0.00 41.38 2.29
956 1417 1.228245 AGCCCAGCGCAGAGAAAAA 60.228 52.632 11.47 0.00 41.38 1.94
957 1418 0.610232 AGCCCAGCGCAGAGAAAAAT 60.610 50.000 11.47 0.00 41.38 1.82
958 1419 0.179153 GCCCAGCGCAGAGAAAAATC 60.179 55.000 11.47 0.00 37.47 2.17
959 1420 1.167851 CCCAGCGCAGAGAAAAATCA 58.832 50.000 11.47 0.00 0.00 2.57
960 1421 1.747355 CCCAGCGCAGAGAAAAATCAT 59.253 47.619 11.47 0.00 0.00 2.45
961 1422 2.223433 CCCAGCGCAGAGAAAAATCATC 60.223 50.000 11.47 0.00 0.00 2.92
962 1423 2.421073 CCAGCGCAGAGAAAAATCATCA 59.579 45.455 11.47 0.00 0.00 3.07
963 1424 3.423571 CAGCGCAGAGAAAAATCATCAC 58.576 45.455 11.47 0.00 0.00 3.06
964 1425 3.126514 CAGCGCAGAGAAAAATCATCACT 59.873 43.478 11.47 0.00 0.00 3.41
965 1426 3.373439 AGCGCAGAGAAAAATCATCACTC 59.627 43.478 11.47 0.00 0.00 3.51
966 1427 3.783548 GCGCAGAGAAAAATCATCACTCG 60.784 47.826 0.30 0.00 33.53 4.18
967 1428 3.614176 CGCAGAGAAAAATCATCACTCGA 59.386 43.478 0.00 0.00 33.53 4.04
968 1429 4.491602 CGCAGAGAAAAATCATCACTCGAC 60.492 45.833 0.00 0.00 33.53 4.20
969 1430 4.201763 GCAGAGAAAAATCATCACTCGACC 60.202 45.833 0.00 0.00 33.53 4.79
970 1431 4.331168 CAGAGAAAAATCATCACTCGACCC 59.669 45.833 0.00 0.00 33.53 4.46
971 1432 4.020218 AGAGAAAAATCATCACTCGACCCA 60.020 41.667 0.00 0.00 33.53 4.51
972 1433 4.003648 AGAAAAATCATCACTCGACCCAC 58.996 43.478 0.00 0.00 0.00 4.61
973 1434 2.010145 AAATCATCACTCGACCCACG 57.990 50.000 0.00 0.00 44.09 4.94
974 1435 0.460284 AATCATCACTCGACCCACGC 60.460 55.000 0.00 0.00 42.26 5.34
975 1436 1.323271 ATCATCACTCGACCCACGCT 61.323 55.000 0.00 0.00 42.26 5.07
976 1437 1.517257 CATCACTCGACCCACGCTC 60.517 63.158 0.00 0.00 42.26 5.03
977 1438 2.711922 ATCACTCGACCCACGCTCC 61.712 63.158 0.00 0.00 42.26 4.70
978 1439 4.436998 CACTCGACCCACGCTCCC 62.437 72.222 0.00 0.00 42.26 4.30
1017 1478 0.324943 CCATGTCGTCACTTTCCCCT 59.675 55.000 0.00 0.00 0.00 4.79
1021 1482 1.343465 TGTCGTCACTTTCCCCTTCTC 59.657 52.381 0.00 0.00 0.00 2.87
1207 1669 3.555324 TCTGCACCACCTTCCGCA 61.555 61.111 0.00 0.00 0.00 5.69
1369 1852 1.083141 ACCTTCTCCTTCCTCCCCC 59.917 63.158 0.00 0.00 0.00 5.40
1785 2268 0.110486 TGTCAAGGGTCCAGCCTTTC 59.890 55.000 7.35 5.20 33.92 2.62
2142 2649 4.965814 TGACAAGGATAGAAGCATCATCC 58.034 43.478 10.55 10.55 38.85 3.51
2376 2888 4.235360 GCTTCATGCTCATTATGGCAATC 58.765 43.478 11.18 0.00 41.90 2.67
2385 2897 5.619981 GCTCATTATGGCAATCGGTAATTCC 60.620 44.000 0.00 0.00 0.00 3.01
2389 2901 2.639065 TGGCAATCGGTAATTCCTGTC 58.361 47.619 0.00 0.00 0.00 3.51
2428 3024 9.995003 TTTAATTTATTGTGCTCATGGAAAACT 57.005 25.926 0.00 0.00 0.00 2.66
2471 3069 5.054390 TGTGTTTCTTGTCTTGTTTGTCC 57.946 39.130 0.00 0.00 0.00 4.02
2894 3567 6.387192 TCAACCTCATAAGATTGAAGGGAA 57.613 37.500 0.00 0.00 0.00 3.97
3092 3878 8.029522 CCTGAGCTACATATTCACGTATATGTT 58.970 37.037 22.60 10.22 45.06 2.71
3095 3881 9.193133 GAGCTACATATTCACGTATATGTTGTT 57.807 33.333 22.60 19.19 45.06 2.83
3096 3882 9.193133 AGCTACATATTCACGTATATGTTGTTC 57.807 33.333 22.60 12.50 45.06 3.18
3097 3883 9.193133 GCTACATATTCACGTATATGTTGTTCT 57.807 33.333 22.60 5.95 45.06 3.01
3112 3898 6.952773 TGTTGTTCTAGTTTTTATGGTGCT 57.047 33.333 0.00 0.00 0.00 4.40
3113 3899 7.341445 TGTTGTTCTAGTTTTTATGGTGCTT 57.659 32.000 0.00 0.00 0.00 3.91
3114 3900 7.199766 TGTTGTTCTAGTTTTTATGGTGCTTG 58.800 34.615 0.00 0.00 0.00 4.01
3115 3901 6.952773 TGTTCTAGTTTTTATGGTGCTTGT 57.047 33.333 0.00 0.00 0.00 3.16
3116 3902 8.347035 GTTGTTCTAGTTTTTATGGTGCTTGTA 58.653 33.333 0.00 0.00 0.00 2.41
3117 3903 8.094798 TGTTCTAGTTTTTATGGTGCTTGTAG 57.905 34.615 0.00 0.00 0.00 2.74
3118 3904 6.737254 TCTAGTTTTTATGGTGCTTGTAGC 57.263 37.500 0.00 0.00 42.82 3.58
3119 3905 6.472887 TCTAGTTTTTATGGTGCTTGTAGCT 58.527 36.000 0.00 0.00 42.97 3.32
3120 3906 6.940298 TCTAGTTTTTATGGTGCTTGTAGCTT 59.060 34.615 0.00 0.00 42.97 3.74
3121 3907 6.013842 AGTTTTTATGGTGCTTGTAGCTTC 57.986 37.500 0.00 0.00 42.97 3.86
3122 3908 5.534654 AGTTTTTATGGTGCTTGTAGCTTCA 59.465 36.000 0.00 0.00 42.97 3.02
3123 3909 5.627499 TTTTATGGTGCTTGTAGCTTCAG 57.373 39.130 0.00 0.00 42.97 3.02
3124 3910 2.867109 ATGGTGCTTGTAGCTTCAGT 57.133 45.000 0.00 0.00 42.97 3.41
3125 3911 2.638480 TGGTGCTTGTAGCTTCAGTT 57.362 45.000 0.00 0.00 42.97 3.16
3126 3912 3.762407 TGGTGCTTGTAGCTTCAGTTA 57.238 42.857 0.00 0.00 42.97 2.24
3127 3913 4.079980 TGGTGCTTGTAGCTTCAGTTAA 57.920 40.909 0.00 0.00 42.97 2.01
3128 3914 4.651778 TGGTGCTTGTAGCTTCAGTTAAT 58.348 39.130 0.00 0.00 42.97 1.40
3129 3915 4.455533 TGGTGCTTGTAGCTTCAGTTAATG 59.544 41.667 0.00 0.00 42.97 1.90
3130 3916 4.695455 GGTGCTTGTAGCTTCAGTTAATGA 59.305 41.667 0.00 0.00 42.97 2.57
3131 3917 5.163814 GGTGCTTGTAGCTTCAGTTAATGAG 60.164 44.000 0.00 0.00 42.97 2.90
3132 3918 4.937620 TGCTTGTAGCTTCAGTTAATGAGG 59.062 41.667 0.00 0.00 42.97 3.86
3139 3925 1.742761 TCAGTTAATGAGGCTGCTGC 58.257 50.000 7.10 7.10 32.77 5.25
3140 3926 1.280133 TCAGTTAATGAGGCTGCTGCT 59.720 47.619 15.64 1.41 34.28 4.24
3141 3927 1.400846 CAGTTAATGAGGCTGCTGCTG 59.599 52.381 15.64 0.77 39.59 4.41
3142 3928 1.004044 AGTTAATGAGGCTGCTGCTGT 59.996 47.619 15.64 3.10 39.59 4.40
3143 3929 1.399791 GTTAATGAGGCTGCTGCTGTC 59.600 52.381 15.64 12.51 39.59 3.51
3144 3930 0.107508 TAATGAGGCTGCTGCTGTCC 60.108 55.000 15.64 9.24 39.59 4.02
3145 3931 2.833604 AATGAGGCTGCTGCTGTCCC 62.834 60.000 15.64 0.00 39.59 4.46
3146 3932 4.025858 GAGGCTGCTGCTGTCCCA 62.026 66.667 15.64 0.00 39.59 4.37
3147 3933 3.972971 GAGGCTGCTGCTGTCCCAG 62.973 68.421 15.64 0.00 39.59 4.45
3157 3943 3.425578 CTGTCCCAGCGTAAGAGTG 57.574 57.895 0.00 0.00 43.02 3.51
3158 3944 0.888619 CTGTCCCAGCGTAAGAGTGA 59.111 55.000 0.00 0.00 43.02 3.41
3159 3945 0.888619 TGTCCCAGCGTAAGAGTGAG 59.111 55.000 0.00 0.00 43.02 3.51
3160 3946 0.889306 GTCCCAGCGTAAGAGTGAGT 59.111 55.000 0.00 0.00 43.02 3.41
3161 3947 0.888619 TCCCAGCGTAAGAGTGAGTG 59.111 55.000 0.00 0.00 43.02 3.51
3162 3948 0.603569 CCCAGCGTAAGAGTGAGTGT 59.396 55.000 0.00 0.00 43.02 3.55
3163 3949 1.670087 CCCAGCGTAAGAGTGAGTGTG 60.670 57.143 0.00 0.00 43.02 3.82
3164 3950 1.269723 CCAGCGTAAGAGTGAGTGTGA 59.730 52.381 0.00 0.00 43.02 3.58
3165 3951 2.094494 CCAGCGTAAGAGTGAGTGTGAT 60.094 50.000 0.00 0.00 43.02 3.06
3166 3952 3.175152 CAGCGTAAGAGTGAGTGTGATC 58.825 50.000 0.00 0.00 43.02 2.92
3167 3953 2.820197 AGCGTAAGAGTGAGTGTGATCA 59.180 45.455 0.00 0.00 43.02 2.92
3168 3954 3.445450 AGCGTAAGAGTGAGTGTGATCAT 59.555 43.478 0.00 0.00 43.02 2.45
3169 3955 3.549471 GCGTAAGAGTGAGTGTGATCATG 59.451 47.826 0.00 0.00 43.02 3.07
3170 3956 4.675408 GCGTAAGAGTGAGTGTGATCATGA 60.675 45.833 0.00 0.00 43.02 3.07
3171 3957 5.402398 CGTAAGAGTGAGTGTGATCATGAA 58.598 41.667 0.00 0.00 43.02 2.57
3172 3958 5.287274 CGTAAGAGTGAGTGTGATCATGAAC 59.713 44.000 0.00 0.00 43.02 3.18
3173 3959 5.480642 AAGAGTGAGTGTGATCATGAACT 57.519 39.130 0.00 3.40 0.00 3.01
3174 3960 5.480642 AGAGTGAGTGTGATCATGAACTT 57.519 39.130 0.00 0.00 0.00 2.66
3175 3961 5.862845 AGAGTGAGTGTGATCATGAACTTT 58.137 37.500 0.00 0.00 0.00 2.66
3176 3962 6.997655 AGAGTGAGTGTGATCATGAACTTTA 58.002 36.000 0.00 0.00 0.00 1.85
3177 3963 7.445121 AGAGTGAGTGTGATCATGAACTTTAA 58.555 34.615 0.00 0.00 0.00 1.52
3178 3964 7.386299 AGAGTGAGTGTGATCATGAACTTTAAC 59.614 37.037 0.00 4.58 0.00 2.01
3179 3965 6.992123 AGTGAGTGTGATCATGAACTTTAACA 59.008 34.615 0.00 0.00 0.00 2.41
3180 3966 7.172190 AGTGAGTGTGATCATGAACTTTAACAG 59.828 37.037 0.00 0.00 0.00 3.16
3181 3967 6.992123 TGAGTGTGATCATGAACTTTAACAGT 59.008 34.615 0.00 0.21 37.30 3.55
3183 3969 8.225603 AGTGTGATCATGAACTTTAACAGTTT 57.774 30.769 0.00 0.00 46.53 2.66
3184 3970 8.345565 AGTGTGATCATGAACTTTAACAGTTTC 58.654 33.333 0.00 0.00 46.53 2.78
3185 3971 8.128582 GTGTGATCATGAACTTTAACAGTTTCA 58.871 33.333 0.00 0.00 46.53 2.69
3186 3972 8.681806 TGTGATCATGAACTTTAACAGTTTCAA 58.318 29.630 0.00 0.00 46.53 2.69
3187 3973 9.683069 GTGATCATGAACTTTAACAGTTTCAAT 57.317 29.630 0.00 0.00 46.53 2.57
3188 3974 9.897744 TGATCATGAACTTTAACAGTTTCAATC 57.102 29.630 0.00 0.00 46.53 2.67
3189 3975 8.955061 ATCATGAACTTTAACAGTTTCAATCG 57.045 30.769 0.00 0.00 46.53 3.34
3190 3976 8.148807 TCATGAACTTTAACAGTTTCAATCGA 57.851 30.769 0.00 0.00 46.53 3.59
3191 3977 8.067784 TCATGAACTTTAACAGTTTCAATCGAC 58.932 33.333 0.00 0.00 46.53 4.20
3192 3978 6.721321 TGAACTTTAACAGTTTCAATCGACC 58.279 36.000 0.00 0.00 46.53 4.79
3193 3979 6.316640 TGAACTTTAACAGTTTCAATCGACCA 59.683 34.615 0.00 0.00 46.53 4.02
3194 3980 6.687081 ACTTTAACAGTTTCAATCGACCAA 57.313 33.333 0.00 0.00 27.32 3.67
3195 3981 6.492254 ACTTTAACAGTTTCAATCGACCAAC 58.508 36.000 0.00 0.00 27.32 3.77
3196 3982 6.094325 ACTTTAACAGTTTCAATCGACCAACA 59.906 34.615 0.00 0.00 27.32 3.33
3197 3983 4.974368 AACAGTTTCAATCGACCAACAA 57.026 36.364 0.00 0.00 0.00 2.83
3198 3984 5.514274 AACAGTTTCAATCGACCAACAAT 57.486 34.783 0.00 0.00 0.00 2.71
3199 3985 5.514274 ACAGTTTCAATCGACCAACAATT 57.486 34.783 0.00 0.00 0.00 2.32
3200 3986 6.627395 ACAGTTTCAATCGACCAACAATTA 57.373 33.333 0.00 0.00 0.00 1.40
3201 3987 7.214467 ACAGTTTCAATCGACCAACAATTAT 57.786 32.000 0.00 0.00 0.00 1.28
3202 3988 7.083858 ACAGTTTCAATCGACCAACAATTATG 58.916 34.615 0.00 0.00 0.00 1.90
3203 3989 6.527722 CAGTTTCAATCGACCAACAATTATGG 59.472 38.462 7.69 7.69 43.84 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.098355 CGAGAGTAAAGAAATGATGGAATTACA 57.902 33.333 0.00 0.00 0.00 2.41
6 7 9.314321 TCGAGAGTAAAGAAATGATGGAATTAC 57.686 33.333 0.00 0.00 0.00 1.89
7 8 9.884636 TTCGAGAGTAAAGAAATGATGGAATTA 57.115 29.630 0.00 0.00 0.00 1.40
8 9 8.792830 TTCGAGAGTAAAGAAATGATGGAATT 57.207 30.769 0.00 0.00 0.00 2.17
9 10 8.970859 ATTCGAGAGTAAAGAAATGATGGAAT 57.029 30.769 0.00 0.00 0.00 3.01
10 11 8.792830 AATTCGAGAGTAAAGAAATGATGGAA 57.207 30.769 0.00 0.00 0.00 3.53
11 12 8.792830 AAATTCGAGAGTAAAGAAATGATGGA 57.207 30.769 0.00 0.00 0.00 3.41
15 16 9.109393 CCCATAAATTCGAGAGTAAAGAAATGA 57.891 33.333 0.00 0.00 0.00 2.57
16 17 9.109393 TCCCATAAATTCGAGAGTAAAGAAATG 57.891 33.333 0.00 0.00 0.00 2.32
17 18 9.853177 ATCCCATAAATTCGAGAGTAAAGAAAT 57.147 29.630 0.00 0.00 0.00 2.17
18 19 9.681062 AATCCCATAAATTCGAGAGTAAAGAAA 57.319 29.630 0.00 0.00 0.00 2.52
19 20 9.681062 AAATCCCATAAATTCGAGAGTAAAGAA 57.319 29.630 0.00 0.00 0.00 2.52
20 21 9.681062 AAAATCCCATAAATTCGAGAGTAAAGA 57.319 29.630 0.00 0.00 0.00 2.52
45 46 7.923878 GTCTTGCACCTAGAAATTTGGTAAAAA 59.076 33.333 0.00 0.00 32.85 1.94
46 47 7.286775 AGTCTTGCACCTAGAAATTTGGTAAAA 59.713 33.333 0.00 0.00 32.85 1.52
47 48 6.775629 AGTCTTGCACCTAGAAATTTGGTAAA 59.224 34.615 0.00 0.00 32.85 2.01
48 49 6.303839 AGTCTTGCACCTAGAAATTTGGTAA 58.696 36.000 0.00 0.00 32.85 2.85
49 50 5.876357 AGTCTTGCACCTAGAAATTTGGTA 58.124 37.500 0.00 0.00 32.85 3.25
50 51 4.729868 AGTCTTGCACCTAGAAATTTGGT 58.270 39.130 0.00 0.00 35.11 3.67
51 52 5.940470 ACTAGTCTTGCACCTAGAAATTTGG 59.060 40.000 16.97 0.00 35.65 3.28
52 53 7.440523 AACTAGTCTTGCACCTAGAAATTTG 57.559 36.000 16.97 0.00 35.65 2.32
53 54 9.000486 GTAAACTAGTCTTGCACCTAGAAATTT 58.000 33.333 16.97 11.20 35.65 1.82
54 55 8.154856 TGTAAACTAGTCTTGCACCTAGAAATT 58.845 33.333 16.97 12.01 35.65 1.82
55 56 7.676947 TGTAAACTAGTCTTGCACCTAGAAAT 58.323 34.615 16.97 8.03 35.65 2.17
56 57 7.058023 TGTAAACTAGTCTTGCACCTAGAAA 57.942 36.000 16.97 3.87 35.65 2.52
57 58 6.659745 TGTAAACTAGTCTTGCACCTAGAA 57.340 37.500 16.97 4.12 35.65 2.10
58 59 6.351033 CCATGTAAACTAGTCTTGCACCTAGA 60.351 42.308 16.97 2.28 35.65 2.43
59 60 5.812642 CCATGTAAACTAGTCTTGCACCTAG 59.187 44.000 0.00 11.03 37.32 3.02
60 61 5.338056 CCCATGTAAACTAGTCTTGCACCTA 60.338 44.000 0.00 0.00 0.00 3.08
61 62 4.565652 CCCATGTAAACTAGTCTTGCACCT 60.566 45.833 0.00 0.00 0.00 4.00
62 63 3.689649 CCCATGTAAACTAGTCTTGCACC 59.310 47.826 0.00 0.00 0.00 5.01
63 64 3.689649 CCCCATGTAAACTAGTCTTGCAC 59.310 47.826 0.00 0.00 0.00 4.57
64 65 3.585289 TCCCCATGTAAACTAGTCTTGCA 59.415 43.478 0.00 3.63 0.00 4.08
65 66 4.216411 TCCCCATGTAAACTAGTCTTGC 57.784 45.455 0.00 0.00 0.00 4.01
66 67 7.827236 TGTAAATCCCCATGTAAACTAGTCTTG 59.173 37.037 0.00 0.00 0.00 3.02
67 68 7.827729 GTGTAAATCCCCATGTAAACTAGTCTT 59.172 37.037 0.00 0.00 0.00 3.01
68 69 7.182206 AGTGTAAATCCCCATGTAAACTAGTCT 59.818 37.037 0.00 0.00 0.00 3.24
69 70 7.280205 CAGTGTAAATCCCCATGTAAACTAGTC 59.720 40.741 0.00 0.00 0.00 2.59
70 71 7.110155 CAGTGTAAATCCCCATGTAAACTAGT 58.890 38.462 0.00 0.00 0.00 2.57
71 72 6.542370 CCAGTGTAAATCCCCATGTAAACTAG 59.458 42.308 0.00 0.00 0.00 2.57
72 73 6.215841 TCCAGTGTAAATCCCCATGTAAACTA 59.784 38.462 0.00 0.00 0.00 2.24
73 74 5.014755 TCCAGTGTAAATCCCCATGTAAACT 59.985 40.000 0.00 0.00 0.00 2.66
74 75 5.258051 TCCAGTGTAAATCCCCATGTAAAC 58.742 41.667 0.00 0.00 0.00 2.01
75 76 5.522315 TCCAGTGTAAATCCCCATGTAAA 57.478 39.130 0.00 0.00 0.00 2.01
76 77 5.522315 TTCCAGTGTAAATCCCCATGTAA 57.478 39.130 0.00 0.00 0.00 2.41
77 78 5.725551 ATTCCAGTGTAAATCCCCATGTA 57.274 39.130 0.00 0.00 0.00 2.29
78 79 4.608170 ATTCCAGTGTAAATCCCCATGT 57.392 40.909 0.00 0.00 0.00 3.21
79 80 5.937975 AAATTCCAGTGTAAATCCCCATG 57.062 39.130 0.00 0.00 0.00 3.66
80 81 6.500049 TCAAAAATTCCAGTGTAAATCCCCAT 59.500 34.615 0.00 0.00 0.00 4.00
81 82 5.841237 TCAAAAATTCCAGTGTAAATCCCCA 59.159 36.000 0.00 0.00 0.00 4.96
82 83 6.014584 AGTCAAAAATTCCAGTGTAAATCCCC 60.015 38.462 0.00 0.00 0.00 4.81
137 195 9.014297 AGTCAAAATTCCAGTGTAAAATCCTAG 57.986 33.333 0.00 0.00 0.00 3.02
138 196 8.934023 AGTCAAAATTCCAGTGTAAAATCCTA 57.066 30.769 0.00 0.00 0.00 2.94
139 197 7.839680 AGTCAAAATTCCAGTGTAAAATCCT 57.160 32.000 0.00 0.00 0.00 3.24
168 227 8.442660 AAAATTCCAGTGTAAATCCCCATTTA 57.557 30.769 0.00 0.00 33.95 1.40
170 229 6.730507 AGAAAATTCCAGTGTAAATCCCCATT 59.269 34.615 0.00 0.00 0.00 3.16
187 246 4.703093 TCCGGTGTAAATCCCAGAAAATTC 59.297 41.667 0.00 0.00 0.00 2.17
190 249 3.791953 TCCGGTGTAAATCCCAGAAAA 57.208 42.857 0.00 0.00 0.00 2.29
207 266 7.027161 CCCATGTAAACTAGTCAAAAATTCCG 58.973 38.462 0.00 0.00 0.00 4.30
212 271 8.485578 AAATCCCCATGTAAACTAGTCAAAAA 57.514 30.769 0.00 0.00 0.00 1.94
215 274 7.691213 TGTAAATCCCCATGTAAACTAGTCAA 58.309 34.615 0.00 0.00 0.00 3.18
216 275 7.260387 TGTAAATCCCCATGTAAACTAGTCA 57.740 36.000 0.00 0.00 0.00 3.41
217 276 8.621286 CATTGTAAATCCCCATGTAAACTAGTC 58.379 37.037 0.00 0.00 0.00 2.59
218 277 8.113462 ACATTGTAAATCCCCATGTAAACTAGT 58.887 33.333 0.00 0.00 0.00 2.57
219 278 8.519799 ACATTGTAAATCCCCATGTAAACTAG 57.480 34.615 0.00 0.00 0.00 2.57
220 279 9.976776 TTACATTGTAAATCCCCATGTAAACTA 57.023 29.630 6.79 0.00 32.31 2.24
221 280 8.887264 TTACATTGTAAATCCCCATGTAAACT 57.113 30.769 6.79 0.00 32.31 2.66
251 310 8.571336 AGTCAAAATTCCATTCTAAAGTCACAG 58.429 33.333 0.00 0.00 0.00 3.66
254 313 9.793259 ACTAGTCAAAATTCCATTCTAAAGTCA 57.207 29.630 0.00 0.00 0.00 3.41
264 323 8.539544 CCCCATTTAAACTAGTCAAAATTCCAT 58.460 33.333 10.98 0.00 0.00 3.41
284 343 8.664669 AGAAAATTACAGTGTAAATCCCCATT 57.335 30.769 19.19 5.05 0.00 3.16
310 369 6.209391 CCCAGTCAATTTTCAGTGTAAATCCT 59.791 38.462 8.02 3.21 0.00 3.24
377 437 7.027874 TCCCCATGTAAACTAGTCAATTTCT 57.972 36.000 0.00 0.00 0.00 2.52
390 450 4.019141 AGACGGTGTAAATCCCCATGTAAA 60.019 41.667 0.00 0.00 0.00 2.01
409 588 4.227134 CCGCCCATGGGAGAGACG 62.227 72.222 36.00 25.79 37.24 4.18
452 905 3.748645 ACCACTAGACAGATCTCACCT 57.251 47.619 0.00 0.00 36.29 4.00
453 906 3.764434 TCAACCACTAGACAGATCTCACC 59.236 47.826 0.00 0.00 36.29 4.02
454 907 4.142271 CCTCAACCACTAGACAGATCTCAC 60.142 50.000 0.00 0.00 36.29 3.51
455 908 4.019858 CCTCAACCACTAGACAGATCTCA 58.980 47.826 0.00 0.00 36.29 3.27
456 909 3.383185 CCCTCAACCACTAGACAGATCTC 59.617 52.174 0.00 0.00 36.29 2.75
457 910 3.370104 CCCTCAACCACTAGACAGATCT 58.630 50.000 0.00 0.00 39.15 2.75
458 911 2.432510 CCCCTCAACCACTAGACAGATC 59.567 54.545 0.00 0.00 0.00 2.75
459 912 2.472029 CCCCTCAACCACTAGACAGAT 58.528 52.381 0.00 0.00 0.00 2.90
460 913 1.552486 CCCCCTCAACCACTAGACAGA 60.552 57.143 0.00 0.00 0.00 3.41
461 914 0.905357 CCCCCTCAACCACTAGACAG 59.095 60.000 0.00 0.00 0.00 3.51
462 915 3.082619 CCCCCTCAACCACTAGACA 57.917 57.895 0.00 0.00 0.00 3.41
477 930 4.295199 AAAACACGCCCCTCCCCC 62.295 66.667 0.00 0.00 0.00 5.40
478 931 2.989253 CAAAACACGCCCCTCCCC 60.989 66.667 0.00 0.00 0.00 4.81
479 932 2.203437 ACAAAACACGCCCCTCCC 60.203 61.111 0.00 0.00 0.00 4.30
480 933 2.561037 CCACAAAACACGCCCCTCC 61.561 63.158 0.00 0.00 0.00 4.30
481 934 1.515521 CTCCACAAAACACGCCCCTC 61.516 60.000 0.00 0.00 0.00 4.30
482 935 1.528309 CTCCACAAAACACGCCCCT 60.528 57.895 0.00 0.00 0.00 4.79
483 936 2.561037 CCTCCACAAAACACGCCCC 61.561 63.158 0.00 0.00 0.00 5.80
484 937 2.561037 CCCTCCACAAAACACGCCC 61.561 63.158 0.00 0.00 0.00 6.13
485 938 0.893727 ATCCCTCCACAAAACACGCC 60.894 55.000 0.00 0.00 0.00 5.68
486 939 0.958822 AATCCCTCCACAAAACACGC 59.041 50.000 0.00 0.00 0.00 5.34
487 940 2.288152 CCAAATCCCTCCACAAAACACG 60.288 50.000 0.00 0.00 0.00 4.49
488 941 2.698274 ACCAAATCCCTCCACAAAACAC 59.302 45.455 0.00 0.00 0.00 3.32
489 942 2.962421 GACCAAATCCCTCCACAAAACA 59.038 45.455 0.00 0.00 0.00 2.83
490 943 3.230976 AGACCAAATCCCTCCACAAAAC 58.769 45.455 0.00 0.00 0.00 2.43
491 944 3.140144 AGAGACCAAATCCCTCCACAAAA 59.860 43.478 0.00 0.00 0.00 2.44
492 945 2.716424 AGAGACCAAATCCCTCCACAAA 59.284 45.455 0.00 0.00 0.00 2.83
503 956 0.884704 AACGCACGCAGAGACCAAAT 60.885 50.000 0.00 0.00 0.00 2.32
504 957 1.522806 AACGCACGCAGAGACCAAA 60.523 52.632 0.00 0.00 0.00 3.28
554 1007 2.315176 CTGGACAAACAAACCCCATCA 58.685 47.619 0.00 0.00 0.00 3.07
555 1008 1.618343 CCTGGACAAACAAACCCCATC 59.382 52.381 0.00 0.00 0.00 3.51
556 1009 1.219213 TCCTGGACAAACAAACCCCAT 59.781 47.619 0.00 0.00 0.00 4.00
557 1010 0.631753 TCCTGGACAAACAAACCCCA 59.368 50.000 0.00 0.00 0.00 4.96
584 1045 1.406477 GGGTCGGGTAAACATCTCACC 60.406 57.143 0.00 0.00 0.00 4.02
674 1135 7.488322 TCAATTCGAAAACAGTCAAATTTCCT 58.512 30.769 0.00 0.00 31.03 3.36
726 1187 3.951037 TGTGCGTTCAAAGGCCATATATT 59.049 39.130 5.01 0.00 38.93 1.28
727 1188 3.315191 GTGTGCGTTCAAAGGCCATATAT 59.685 43.478 5.01 0.00 38.93 0.86
728 1189 2.680841 GTGTGCGTTCAAAGGCCATATA 59.319 45.455 5.01 0.00 38.93 0.86
729 1190 1.472480 GTGTGCGTTCAAAGGCCATAT 59.528 47.619 5.01 0.00 38.93 1.78
730 1191 0.878416 GTGTGCGTTCAAAGGCCATA 59.122 50.000 5.01 0.00 38.93 2.74
731 1192 1.659794 GTGTGCGTTCAAAGGCCAT 59.340 52.632 5.01 0.00 38.93 4.40
732 1193 2.829206 CGTGTGCGTTCAAAGGCCA 61.829 57.895 5.01 0.93 38.93 5.36
733 1194 2.051345 CGTGTGCGTTCAAAGGCC 60.051 61.111 0.00 0.00 38.93 5.19
734 1195 2.725815 GCGTGTGCGTTCAAAGGC 60.726 61.111 0.64 0.64 40.81 4.35
744 1205 1.199624 CCTTCTTTGTTTGCGTGTGC 58.800 50.000 0.00 0.00 43.20 4.57
745 1206 2.559998 ACCTTCTTTGTTTGCGTGTG 57.440 45.000 0.00 0.00 0.00 3.82
746 1207 2.490115 TGAACCTTCTTTGTTTGCGTGT 59.510 40.909 0.00 0.00 0.00 4.49
747 1208 3.143807 TGAACCTTCTTTGTTTGCGTG 57.856 42.857 0.00 0.00 0.00 5.34
748 1209 3.490761 CCATGAACCTTCTTTGTTTGCGT 60.491 43.478 0.00 0.00 0.00 5.24
749 1210 3.052036 CCATGAACCTTCTTTGTTTGCG 58.948 45.455 0.00 0.00 0.00 4.85
750 1211 4.301628 CTCCATGAACCTTCTTTGTTTGC 58.698 43.478 0.00 0.00 0.00 3.68
751 1212 4.038402 AGCTCCATGAACCTTCTTTGTTTG 59.962 41.667 0.00 0.00 0.00 2.93
752 1213 4.218312 AGCTCCATGAACCTTCTTTGTTT 58.782 39.130 0.00 0.00 0.00 2.83
753 1214 3.837355 AGCTCCATGAACCTTCTTTGTT 58.163 40.909 0.00 0.00 0.00 2.83
754 1215 3.515602 AGCTCCATGAACCTTCTTTGT 57.484 42.857 0.00 0.00 0.00 2.83
755 1216 6.521151 AAATAGCTCCATGAACCTTCTTTG 57.479 37.500 0.00 0.00 0.00 2.77
756 1217 6.494835 ACAAAATAGCTCCATGAACCTTCTTT 59.505 34.615 0.00 0.00 0.00 2.52
757 1218 6.012745 ACAAAATAGCTCCATGAACCTTCTT 58.987 36.000 0.00 0.00 0.00 2.52
758 1219 5.574188 ACAAAATAGCTCCATGAACCTTCT 58.426 37.500 0.00 0.00 0.00 2.85
759 1220 5.904362 ACAAAATAGCTCCATGAACCTTC 57.096 39.130 0.00 0.00 0.00 3.46
760 1221 6.670695 AAACAAAATAGCTCCATGAACCTT 57.329 33.333 0.00 0.00 0.00 3.50
761 1222 6.670695 AAAACAAAATAGCTCCATGAACCT 57.329 33.333 0.00 0.00 0.00 3.50
762 1223 7.492344 CCATAAAACAAAATAGCTCCATGAACC 59.508 37.037 0.00 0.00 0.00 3.62
763 1224 7.492344 CCCATAAAACAAAATAGCTCCATGAAC 59.508 37.037 0.00 0.00 0.00 3.18
764 1225 7.364585 CCCCATAAAACAAAATAGCTCCATGAA 60.365 37.037 0.00 0.00 0.00 2.57
765 1226 6.098124 CCCCATAAAACAAAATAGCTCCATGA 59.902 38.462 0.00 0.00 0.00 3.07
766 1227 6.098124 TCCCCATAAAACAAAATAGCTCCATG 59.902 38.462 0.00 0.00 0.00 3.66
767 1228 6.201591 TCCCCATAAAACAAAATAGCTCCAT 58.798 36.000 0.00 0.00 0.00 3.41
768 1229 5.584913 TCCCCATAAAACAAAATAGCTCCA 58.415 37.500 0.00 0.00 0.00 3.86
769 1230 6.406961 CCTTCCCCATAAAACAAAATAGCTCC 60.407 42.308 0.00 0.00 0.00 4.70
770 1231 6.154534 ACCTTCCCCATAAAACAAAATAGCTC 59.845 38.462 0.00 0.00 0.00 4.09
771 1232 6.022958 ACCTTCCCCATAAAACAAAATAGCT 58.977 36.000 0.00 0.00 0.00 3.32
772 1233 6.294361 ACCTTCCCCATAAAACAAAATAGC 57.706 37.500 0.00 0.00 0.00 2.97
773 1234 7.033185 CGAACCTTCCCCATAAAACAAAATAG 58.967 38.462 0.00 0.00 0.00 1.73
774 1235 6.494146 ACGAACCTTCCCCATAAAACAAAATA 59.506 34.615 0.00 0.00 0.00 1.40
775 1236 5.305902 ACGAACCTTCCCCATAAAACAAAAT 59.694 36.000 0.00 0.00 0.00 1.82
776 1237 4.650131 ACGAACCTTCCCCATAAAACAAAA 59.350 37.500 0.00 0.00 0.00 2.44
777 1238 4.216708 ACGAACCTTCCCCATAAAACAAA 58.783 39.130 0.00 0.00 0.00 2.83
778 1239 3.834938 ACGAACCTTCCCCATAAAACAA 58.165 40.909 0.00 0.00 0.00 2.83
779 1240 3.512219 ACGAACCTTCCCCATAAAACA 57.488 42.857 0.00 0.00 0.00 2.83
780 1241 4.835678 TCTACGAACCTTCCCCATAAAAC 58.164 43.478 0.00 0.00 0.00 2.43
781 1242 4.778958 TCTCTACGAACCTTCCCCATAAAA 59.221 41.667 0.00 0.00 0.00 1.52
782 1243 4.355549 TCTCTACGAACCTTCCCCATAAA 58.644 43.478 0.00 0.00 0.00 1.40
783 1244 3.985127 TCTCTACGAACCTTCCCCATAA 58.015 45.455 0.00 0.00 0.00 1.90
784 1245 3.675348 TCTCTACGAACCTTCCCCATA 57.325 47.619 0.00 0.00 0.00 2.74
785 1246 2.544844 TCTCTACGAACCTTCCCCAT 57.455 50.000 0.00 0.00 0.00 4.00
786 1247 2.544844 ATCTCTACGAACCTTCCCCA 57.455 50.000 0.00 0.00 0.00 4.96
787 1248 5.511031 GGATTTATCTCTACGAACCTTCCCC 60.511 48.000 0.00 0.00 0.00 4.81
788 1249 5.304871 AGGATTTATCTCTACGAACCTTCCC 59.695 44.000 0.00 0.00 0.00 3.97
789 1250 6.217294 CAGGATTTATCTCTACGAACCTTCC 58.783 44.000 0.00 0.00 0.00 3.46
790 1251 6.040616 TCCAGGATTTATCTCTACGAACCTTC 59.959 42.308 0.00 0.00 0.00 3.46
791 1252 5.897824 TCCAGGATTTATCTCTACGAACCTT 59.102 40.000 0.00 0.00 0.00 3.50
792 1253 5.302313 GTCCAGGATTTATCTCTACGAACCT 59.698 44.000 0.00 0.00 0.00 3.50
793 1254 5.302313 AGTCCAGGATTTATCTCTACGAACC 59.698 44.000 0.00 0.00 0.00 3.62
794 1255 6.263617 AGAGTCCAGGATTTATCTCTACGAAC 59.736 42.308 4.97 0.00 31.73 3.95
795 1256 6.366340 AGAGTCCAGGATTTATCTCTACGAA 58.634 40.000 4.97 0.00 31.73 3.85
796 1257 5.942961 AGAGTCCAGGATTTATCTCTACGA 58.057 41.667 4.97 0.00 31.73 3.43
797 1258 6.642707 AAGAGTCCAGGATTTATCTCTACG 57.357 41.667 6.91 0.00 32.92 3.51
835 1296 0.029834 CAGCATTATCGGCAGGTTGC 59.970 55.000 0.00 0.00 44.08 4.17
836 1297 0.664761 CCAGCATTATCGGCAGGTTG 59.335 55.000 0.00 0.00 33.66 3.77
837 1298 0.546122 TCCAGCATTATCGGCAGGTT 59.454 50.000 0.00 0.00 38.85 3.50
838 1299 0.179045 GTCCAGCATTATCGGCAGGT 60.179 55.000 0.00 0.00 38.85 4.00
839 1300 0.107456 AGTCCAGCATTATCGGCAGG 59.893 55.000 0.00 0.00 39.10 4.85
840 1301 2.036475 ACTAGTCCAGCATTATCGGCAG 59.964 50.000 0.00 0.00 0.00 4.85
841 1302 2.039418 ACTAGTCCAGCATTATCGGCA 58.961 47.619 0.00 0.00 0.00 5.69
842 1303 2.821991 ACTAGTCCAGCATTATCGGC 57.178 50.000 0.00 0.00 0.00 5.54
843 1304 4.693283 TGAAACTAGTCCAGCATTATCGG 58.307 43.478 0.00 0.00 0.00 4.18
844 1305 6.662414 TTTGAAACTAGTCCAGCATTATCG 57.338 37.500 0.00 0.00 0.00 2.92
845 1306 8.515414 AGTTTTTGAAACTAGTCCAGCATTATC 58.485 33.333 4.36 0.00 0.00 1.75
846 1307 8.409358 AGTTTTTGAAACTAGTCCAGCATTAT 57.591 30.769 4.36 0.00 0.00 1.28
847 1308 7.817418 AGTTTTTGAAACTAGTCCAGCATTA 57.183 32.000 4.36 0.00 0.00 1.90
848 1309 6.715347 AGTTTTTGAAACTAGTCCAGCATT 57.285 33.333 4.36 0.00 0.00 3.56
849 1310 6.715347 AAGTTTTTGAAACTAGTCCAGCAT 57.285 33.333 6.50 0.00 0.00 3.79
850 1311 6.151985 TGAAAGTTTTTGAAACTAGTCCAGCA 59.848 34.615 6.50 0.00 0.00 4.41
851 1312 6.560711 TGAAAGTTTTTGAAACTAGTCCAGC 58.439 36.000 6.50 0.00 0.00 4.85
852 1313 6.693113 GCTGAAAGTTTTTGAAACTAGTCCAG 59.307 38.462 6.50 11.07 35.30 3.86
853 1314 6.377146 AGCTGAAAGTTTTTGAAACTAGTCCA 59.623 34.615 6.50 0.00 35.30 4.02
854 1315 6.796426 AGCTGAAAGTTTTTGAAACTAGTCC 58.204 36.000 6.50 0.00 35.30 3.85
855 1316 8.587111 CAAAGCTGAAAGTTTTTGAAACTAGTC 58.413 33.333 6.50 7.91 45.44 2.59
856 1317 8.088365 ACAAAGCTGAAAGTTTTTGAAACTAGT 58.912 29.630 6.50 0.00 45.44 2.57
857 1318 8.466086 ACAAAGCTGAAAGTTTTTGAAACTAG 57.534 30.769 6.50 2.83 45.44 2.57
858 1319 9.349145 GTACAAAGCTGAAAGTTTTTGAAACTA 57.651 29.630 6.50 0.00 45.44 2.24
859 1320 8.088365 AGTACAAAGCTGAAAGTTTTTGAAACT 58.912 29.630 0.00 0.44 45.44 2.66
860 1321 8.239681 AGTACAAAGCTGAAAGTTTTTGAAAC 57.760 30.769 0.00 0.00 45.44 2.78
861 1322 8.707839 CAAGTACAAAGCTGAAAGTTTTTGAAA 58.292 29.630 0.00 0.00 45.44 2.69
862 1323 7.148656 GCAAGTACAAAGCTGAAAGTTTTTGAA 60.149 33.333 0.00 0.00 45.44 2.69
863 1324 6.310224 GCAAGTACAAAGCTGAAAGTTTTTGA 59.690 34.615 0.00 0.00 45.44 2.69
864 1325 6.311200 AGCAAGTACAAAGCTGAAAGTTTTTG 59.689 34.615 6.01 0.00 45.44 2.44
865 1326 6.398095 AGCAAGTACAAAGCTGAAAGTTTTT 58.602 32.000 6.01 0.00 45.44 1.94
867 1328 5.582689 AGCAAGTACAAAGCTGAAAGTTT 57.417 34.783 6.01 0.00 39.89 2.66
875 1336 0.895559 GGCCCAGCAAGTACAAAGCT 60.896 55.000 0.00 0.00 39.63 3.74
876 1337 1.586541 GGCCCAGCAAGTACAAAGC 59.413 57.895 0.00 0.00 0.00 3.51
877 1338 1.586154 CGGGCCCAGCAAGTACAAAG 61.586 60.000 24.92 0.00 0.00 2.77
878 1339 1.602323 CGGGCCCAGCAAGTACAAA 60.602 57.895 24.92 0.00 0.00 2.83
879 1340 2.033448 CGGGCCCAGCAAGTACAA 59.967 61.111 24.92 0.00 0.00 2.41
880 1341 4.715523 GCGGGCCCAGCAAGTACA 62.716 66.667 27.01 0.00 34.19 2.90
892 1353 3.980442 TTCACCGGTAATGGCGGGC 62.980 63.158 6.87 0.00 32.81 6.13
893 1354 1.817941 CTTCACCGGTAATGGCGGG 60.818 63.158 6.87 0.00 35.32 6.13
894 1355 2.469516 GCTTCACCGGTAATGGCGG 61.470 63.158 6.87 0.00 0.00 6.13
895 1356 2.469516 GGCTTCACCGGTAATGGCG 61.470 63.158 6.87 0.00 0.00 5.69
896 1357 1.377987 TGGCTTCACCGGTAATGGC 60.378 57.895 6.87 8.83 43.94 4.40
897 1358 0.322098 TGTGGCTTCACCGGTAATGG 60.322 55.000 6.87 0.00 43.94 3.16
898 1359 1.750193 ATGTGGCTTCACCGGTAATG 58.250 50.000 6.87 0.00 43.94 1.90
899 1360 2.491693 CAAATGTGGCTTCACCGGTAAT 59.508 45.455 6.87 0.00 43.94 1.89
900 1361 1.883275 CAAATGTGGCTTCACCGGTAA 59.117 47.619 6.87 0.00 43.94 2.85
901 1362 1.529226 CAAATGTGGCTTCACCGGTA 58.471 50.000 6.87 0.00 43.94 4.02
902 1363 1.178534 CCAAATGTGGCTTCACCGGT 61.179 55.000 0.00 0.00 43.94 5.28
903 1364 1.586028 CCAAATGTGGCTTCACCGG 59.414 57.895 0.00 0.00 43.94 5.28
904 1365 1.586028 CCCAAATGTGGCTTCACCG 59.414 57.895 0.00 0.00 44.46 4.94
905 1366 1.293179 GCCCAAATGTGGCTTCACC 59.707 57.895 0.00 0.00 45.70 4.02
906 1367 4.994744 GCCCAAATGTGGCTTCAC 57.005 55.556 0.00 0.00 45.70 3.18
913 1374 2.162338 CTGCCCACAGCCCAAATGTG 62.162 60.000 0.00 0.00 46.11 3.21
914 1375 1.909781 CTGCCCACAGCCCAAATGT 60.910 57.895 0.00 0.00 42.71 2.71
915 1376 2.975536 CTGCCCACAGCCCAAATG 59.024 61.111 0.00 0.00 42.71 2.32
937 1398 1.518056 TTTTTCTCTGCGCTGGGCTG 61.518 55.000 17.81 16.74 44.05 4.85
938 1399 0.610232 ATTTTTCTCTGCGCTGGGCT 60.610 50.000 17.81 0.00 44.05 5.19
939 1400 0.179153 GATTTTTCTCTGCGCTGGGC 60.179 55.000 14.70 10.06 43.96 5.36
940 1401 1.167851 TGATTTTTCTCTGCGCTGGG 58.832 50.000 14.70 11.56 0.00 4.45
941 1402 2.421073 TGATGATTTTTCTCTGCGCTGG 59.579 45.455 14.70 4.50 0.00 4.85
942 1403 3.126514 AGTGATGATTTTTCTCTGCGCTG 59.873 43.478 9.73 8.88 0.00 5.18
943 1404 3.341823 AGTGATGATTTTTCTCTGCGCT 58.658 40.909 9.73 0.00 0.00 5.92
944 1405 3.678662 GAGTGATGATTTTTCTCTGCGC 58.321 45.455 0.00 0.00 0.00 6.09
945 1406 3.614176 TCGAGTGATGATTTTTCTCTGCG 59.386 43.478 0.00 0.00 0.00 5.18
946 1407 4.201763 GGTCGAGTGATGATTTTTCTCTGC 60.202 45.833 0.00 0.00 0.00 4.26
947 1408 4.331168 GGGTCGAGTGATGATTTTTCTCTG 59.669 45.833 0.00 0.00 0.00 3.35
948 1409 4.020218 TGGGTCGAGTGATGATTTTTCTCT 60.020 41.667 0.00 0.00 0.00 3.10
949 1410 4.093556 GTGGGTCGAGTGATGATTTTTCTC 59.906 45.833 0.00 0.00 0.00 2.87
950 1411 4.003648 GTGGGTCGAGTGATGATTTTTCT 58.996 43.478 0.00 0.00 0.00 2.52
951 1412 3.181520 CGTGGGTCGAGTGATGATTTTTC 60.182 47.826 0.00 0.00 42.86 2.29
952 1413 2.742053 CGTGGGTCGAGTGATGATTTTT 59.258 45.455 0.00 0.00 42.86 1.94
953 1414 2.346803 CGTGGGTCGAGTGATGATTTT 58.653 47.619 0.00 0.00 42.86 1.82
954 1415 2.007049 GCGTGGGTCGAGTGATGATTT 61.007 52.381 0.00 0.00 42.86 2.17
955 1416 0.460284 GCGTGGGTCGAGTGATGATT 60.460 55.000 0.00 0.00 42.86 2.57
956 1417 1.141881 GCGTGGGTCGAGTGATGAT 59.858 57.895 0.00 0.00 42.86 2.45
957 1418 1.934220 GAGCGTGGGTCGAGTGATGA 61.934 60.000 0.00 0.00 42.86 2.92
958 1419 1.517257 GAGCGTGGGTCGAGTGATG 60.517 63.158 0.00 0.00 42.86 3.07
959 1420 2.711922 GGAGCGTGGGTCGAGTGAT 61.712 63.158 0.00 0.00 42.86 3.06
960 1421 3.371063 GGAGCGTGGGTCGAGTGA 61.371 66.667 0.00 0.00 42.86 3.41
961 1422 4.436998 GGGAGCGTGGGTCGAGTG 62.437 72.222 0.00 0.00 42.86 3.51
992 1453 0.036732 AAGTGACGACATGGCCACAT 59.963 50.000 8.16 0.00 37.99 3.21
993 1454 0.179032 AAAGTGACGACATGGCCACA 60.179 50.000 8.16 0.00 32.35 4.17
994 1455 0.517316 GAAAGTGACGACATGGCCAC 59.483 55.000 8.16 0.00 0.00 5.01
995 1456 0.605319 GGAAAGTGACGACATGGCCA 60.605 55.000 8.56 8.56 0.00 5.36
996 1457 1.305930 GGGAAAGTGACGACATGGCC 61.306 60.000 0.00 0.00 0.00 5.36
997 1458 1.305930 GGGGAAAGTGACGACATGGC 61.306 60.000 0.00 0.00 0.00 4.40
998 1459 0.324943 AGGGGAAAGTGACGACATGG 59.675 55.000 0.00 0.00 0.00 3.66
999 1460 2.076863 GAAGGGGAAAGTGACGACATG 58.923 52.381 0.00 0.00 0.00 3.21
1000 1461 1.978580 AGAAGGGGAAAGTGACGACAT 59.021 47.619 0.00 0.00 0.00 3.06
1001 1462 1.343465 GAGAAGGGGAAAGTGACGACA 59.657 52.381 0.00 0.00 0.00 4.35
1002 1463 1.669211 CGAGAAGGGGAAAGTGACGAC 60.669 57.143 0.00 0.00 0.00 4.34
1003 1464 0.601558 CGAGAAGGGGAAAGTGACGA 59.398 55.000 0.00 0.00 0.00 4.20
1017 1478 0.886563 GAGGAAACCCTCGACGAGAA 59.113 55.000 26.11 0.00 40.68 2.87
1195 1657 0.250513 GAGATTCTGCGGAAGGTGGT 59.749 55.000 14.43 0.00 34.70 4.16
1207 1669 1.187087 GACCTGTCGGTGGAGATTCT 58.813 55.000 0.00 0.00 45.73 2.40
1257 1719 4.162690 AATCCGAGGAGTGGCGGC 62.163 66.667 0.00 0.00 46.79 6.53
1260 1722 1.443828 GAGGAATCCGAGGAGTGGC 59.556 63.158 0.00 0.00 0.00 5.01
1489 1972 4.129737 GAGCAGGACGTAGCGCCA 62.130 66.667 2.29 0.00 35.48 5.69
1665 2148 0.251077 AGAAGACAAAGGCAGCCAGG 60.251 55.000 15.80 4.71 0.00 4.45
1785 2268 1.670674 GCATAATGGCGCATGGGAATG 60.671 52.381 14.90 6.04 0.00 2.67
2376 2888 7.601508 ACAGTACTAAAAAGACAGGAATTACCG 59.398 37.037 0.00 0.00 44.74 4.02
2427 3023 5.817816 ACAATTATGTTCCCGAGCTTTCTAG 59.182 40.000 0.00 0.00 35.91 2.43
2428 3024 5.584649 CACAATTATGTTCCCGAGCTTTCTA 59.415 40.000 0.00 0.00 37.82 2.10
2471 3069 2.088950 TCTCTTTAAAAGGCGACCGG 57.911 50.000 0.00 0.00 0.00 5.28
2631 3245 8.349568 ACCAGAAATAAAGTTGTATTCCTTCC 57.650 34.615 0.00 0.00 0.00 3.46
2754 3417 4.998672 CCATACAGGTTTACCTCGAAACAA 59.001 41.667 0.00 0.00 46.65 2.83
2841 3514 5.446143 AAAACAACATCGCAGGATAACAA 57.554 34.783 0.00 0.00 0.00 2.83
2850 3523 6.493449 TGATTCAGATAAAACAACATCGCA 57.507 33.333 0.00 0.00 0.00 5.10
2894 3567 1.065491 TCAGTTGCCCGTGATAAGCAT 60.065 47.619 0.00 0.00 36.20 3.79
3092 3878 6.952773 ACAAGCACCATAAAAACTAGAACA 57.047 33.333 0.00 0.00 0.00 3.18
3095 3881 6.472887 AGCTACAAGCACCATAAAAACTAGA 58.527 36.000 0.00 0.00 45.56 2.43
3096 3882 6.743575 AGCTACAAGCACCATAAAAACTAG 57.256 37.500 1.22 0.00 45.56 2.57
3097 3883 6.712998 TGAAGCTACAAGCACCATAAAAACTA 59.287 34.615 1.22 0.00 45.56 2.24
3098 3884 5.534654 TGAAGCTACAAGCACCATAAAAACT 59.465 36.000 1.22 0.00 45.56 2.66
3099 3885 5.768317 TGAAGCTACAAGCACCATAAAAAC 58.232 37.500 1.22 0.00 45.56 2.43
3100 3886 5.534654 ACTGAAGCTACAAGCACCATAAAAA 59.465 36.000 1.22 0.00 45.56 1.94
3101 3887 5.070001 ACTGAAGCTACAAGCACCATAAAA 58.930 37.500 1.22 0.00 45.56 1.52
3102 3888 4.651778 ACTGAAGCTACAAGCACCATAAA 58.348 39.130 1.22 0.00 45.56 1.40
3103 3889 4.286297 ACTGAAGCTACAAGCACCATAA 57.714 40.909 1.22 0.00 45.56 1.90
3104 3890 3.981071 ACTGAAGCTACAAGCACCATA 57.019 42.857 1.22 0.00 45.56 2.74
3105 3891 2.867109 ACTGAAGCTACAAGCACCAT 57.133 45.000 1.22 0.00 45.56 3.55
3106 3892 2.638480 AACTGAAGCTACAAGCACCA 57.362 45.000 1.22 0.00 45.56 4.17
3107 3893 4.695455 TCATTAACTGAAGCTACAAGCACC 59.305 41.667 1.22 0.00 45.56 5.01
3108 3894 5.163814 CCTCATTAACTGAAGCTACAAGCAC 60.164 44.000 1.22 0.00 45.56 4.40
3109 3895 4.937620 CCTCATTAACTGAAGCTACAAGCA 59.062 41.667 1.22 0.00 45.56 3.91
3110 3896 4.201861 GCCTCATTAACTGAAGCTACAAGC 60.202 45.833 0.00 0.00 38.15 4.01
3111 3897 5.476752 GCCTCATTAACTGAAGCTACAAG 57.523 43.478 0.00 0.00 38.15 3.16
3117 3903 2.097142 CAGCAGCCTCATTAACTGAAGC 59.903 50.000 0.00 0.00 40.95 3.86
3118 3904 2.097142 GCAGCAGCCTCATTAACTGAAG 59.903 50.000 0.00 0.00 32.14 3.02
3119 3905 2.086869 GCAGCAGCCTCATTAACTGAA 58.913 47.619 0.00 0.00 32.14 3.02
3120 3906 1.280133 AGCAGCAGCCTCATTAACTGA 59.720 47.619 0.00 0.00 43.56 3.41
3121 3907 1.400846 CAGCAGCAGCCTCATTAACTG 59.599 52.381 0.00 0.00 43.56 3.16
3122 3908 1.004044 ACAGCAGCAGCCTCATTAACT 59.996 47.619 0.00 0.00 43.56 2.24
3123 3909 1.399791 GACAGCAGCAGCCTCATTAAC 59.600 52.381 0.00 0.00 43.56 2.01
3124 3910 1.679944 GGACAGCAGCAGCCTCATTAA 60.680 52.381 0.00 0.00 43.56 1.40
3125 3911 0.107508 GGACAGCAGCAGCCTCATTA 60.108 55.000 0.00 0.00 43.56 1.90
3126 3912 1.378250 GGACAGCAGCAGCCTCATT 60.378 57.895 0.00 0.00 43.56 2.57
3127 3913 2.271497 GGACAGCAGCAGCCTCAT 59.729 61.111 0.00 0.00 43.56 2.90
3128 3914 4.025858 GGGACAGCAGCAGCCTCA 62.026 66.667 0.00 0.00 43.56 3.86
3129 3915 4.025858 TGGGACAGCAGCAGCCTC 62.026 66.667 0.00 0.00 43.56 4.70
3140 3926 0.888619 CTCACTCTTACGCTGGGACA 59.111 55.000 0.00 0.00 0.00 4.02
3141 3927 0.889306 ACTCACTCTTACGCTGGGAC 59.111 55.000 0.00 0.00 0.00 4.46
3142 3928 0.888619 CACTCACTCTTACGCTGGGA 59.111 55.000 0.00 0.00 0.00 4.37
3143 3929 0.603569 ACACTCACTCTTACGCTGGG 59.396 55.000 0.00 0.00 0.00 4.45
3144 3930 1.269723 TCACACTCACTCTTACGCTGG 59.730 52.381 0.00 0.00 0.00 4.85
3145 3931 2.706555 TCACACTCACTCTTACGCTG 57.293 50.000 0.00 0.00 0.00 5.18
3146 3932 2.820197 TGATCACACTCACTCTTACGCT 59.180 45.455 0.00 0.00 0.00 5.07
3147 3933 3.217599 TGATCACACTCACTCTTACGC 57.782 47.619 0.00 0.00 0.00 4.42
3148 3934 4.986622 TCATGATCACACTCACTCTTACG 58.013 43.478 0.00 0.00 0.00 3.18
3149 3935 6.393990 AGTTCATGATCACACTCACTCTTAC 58.606 40.000 0.00 0.00 0.00 2.34
3150 3936 6.596309 AGTTCATGATCACACTCACTCTTA 57.404 37.500 0.00 0.00 0.00 2.10
3151 3937 5.480642 AGTTCATGATCACACTCACTCTT 57.519 39.130 0.00 0.00 0.00 2.85
3152 3938 5.480642 AAGTTCATGATCACACTCACTCT 57.519 39.130 0.00 0.00 0.00 3.24
3153 3939 7.171508 TGTTAAAGTTCATGATCACACTCACTC 59.828 37.037 0.00 0.00 0.00 3.51
3154 3940 6.992123 TGTTAAAGTTCATGATCACACTCACT 59.008 34.615 0.00 0.00 0.00 3.41
3155 3941 7.041780 ACTGTTAAAGTTCATGATCACACTCAC 60.042 37.037 0.00 0.55 34.57 3.51
3156 3942 6.992123 ACTGTTAAAGTTCATGATCACACTCA 59.008 34.615 0.00 0.00 34.57 3.41
3157 3943 7.426929 ACTGTTAAAGTTCATGATCACACTC 57.573 36.000 0.00 0.00 34.57 3.51
3158 3944 7.807977 AACTGTTAAAGTTCATGATCACACT 57.192 32.000 0.00 0.00 46.60 3.55
3171 3957 6.094325 TGTTGGTCGATTGAAACTGTTAAAGT 59.906 34.615 0.00 0.00 42.60 2.66
3172 3958 6.491394 TGTTGGTCGATTGAAACTGTTAAAG 58.509 36.000 0.00 0.00 0.00 1.85
3173 3959 6.438259 TGTTGGTCGATTGAAACTGTTAAA 57.562 33.333 0.00 0.00 0.00 1.52
3174 3960 6.438259 TTGTTGGTCGATTGAAACTGTTAA 57.562 33.333 0.00 0.00 0.00 2.01
3175 3961 6.627395 ATTGTTGGTCGATTGAAACTGTTA 57.373 33.333 0.00 0.00 0.00 2.41
3176 3962 4.974368 TTGTTGGTCGATTGAAACTGTT 57.026 36.364 0.00 0.00 0.00 3.16
3177 3963 5.514274 AATTGTTGGTCGATTGAAACTGT 57.486 34.783 0.00 0.00 0.00 3.55
3178 3964 6.527722 CCATAATTGTTGGTCGATTGAAACTG 59.472 38.462 0.00 0.00 32.85 3.16
3179 3965 6.208599 ACCATAATTGTTGGTCGATTGAAACT 59.791 34.615 8.64 0.00 44.15 2.66
3180 3966 6.386654 ACCATAATTGTTGGTCGATTGAAAC 58.613 36.000 8.64 0.00 44.15 2.78
3181 3967 6.582677 ACCATAATTGTTGGTCGATTGAAA 57.417 33.333 8.64 0.00 44.15 2.69
3182 3968 6.207614 TCAACCATAATTGTTGGTCGATTGAA 59.792 34.615 13.48 0.54 46.75 2.69
3183 3969 5.707764 TCAACCATAATTGTTGGTCGATTGA 59.292 36.000 13.48 11.00 46.75 2.57
3184 3970 5.948588 TCAACCATAATTGTTGGTCGATTG 58.051 37.500 13.48 9.31 46.75 2.67
3185 3971 5.393027 GCTCAACCATAATTGTTGGTCGATT 60.393 40.000 13.48 0.00 46.75 3.34
3186 3972 4.096382 GCTCAACCATAATTGTTGGTCGAT 59.904 41.667 13.48 0.00 46.75 3.59
3187 3973 3.438781 GCTCAACCATAATTGTTGGTCGA 59.561 43.478 13.48 8.54 46.75 4.20
3188 3974 3.440173 AGCTCAACCATAATTGTTGGTCG 59.560 43.478 13.48 5.03 46.75 4.79
3189 3975 5.449177 GCTAGCTCAACCATAATTGTTGGTC 60.449 44.000 7.70 3.93 46.75 4.02
3191 3977 4.641989 AGCTAGCTCAACCATAATTGTTGG 59.358 41.667 12.68 7.33 42.58 3.77
3192 3978 5.824904 AGCTAGCTCAACCATAATTGTTG 57.175 39.130 12.68 1.65 43.46 3.33
3193 3979 5.529060 GCTAGCTAGCTCAACCATAATTGTT 59.471 40.000 33.71 0.00 45.62 2.83
3194 3980 5.059833 GCTAGCTAGCTCAACCATAATTGT 58.940 41.667 33.71 0.00 45.62 2.71
3195 3981 5.604010 GCTAGCTAGCTCAACCATAATTG 57.396 43.478 33.71 0.00 45.62 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.