Multiple sequence alignment - TraesCS7A01G176200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G176200 chr7A 100.000 5094 0 0 1 5094 129263671 129258578 0.000000e+00 9407
1 TraesCS7A01G176200 chr7A 98.649 222 3 0 2090 2311 492342839 492343060 1.330000e-105 394
2 TraesCS7A01G176200 chr7A 97.788 226 4 1 2087 2311 722444701 722444476 6.180000e-104 388
3 TraesCS7A01G176200 chr7B 94.042 2182 105 14 2306 4473 91662705 91660535 0.000000e+00 3286
4 TraesCS7A01G176200 chr7B 89.379 1563 82 38 560 2094 91664206 91662700 0.000000e+00 1890
5 TraesCS7A01G176200 chr7B 80.632 475 33 33 4638 5093 91660297 91659863 3.830000e-81 313
6 TraesCS7A01G176200 chr7D 92.619 2249 131 22 2306 4535 130115098 130112866 0.000000e+00 3201
7 TraesCS7A01G176200 chr7D 89.286 1232 56 33 925 2094 130116310 130115093 0.000000e+00 1474
8 TraesCS7A01G176200 chr7D 85.495 910 86 21 1 879 130117536 130116642 0.000000e+00 907
9 TraesCS7A01G176200 chr7D 89.556 450 41 5 9 452 478798824 478799273 2.660000e-157 566
10 TraesCS7A01G176200 chr7D 86.777 242 9 9 4623 4852 130112706 130112476 1.100000e-61 248
11 TraesCS7A01G176200 chr7D 88.636 88 4 1 4955 5042 130112403 130112322 9.020000e-18 102
12 TraesCS7A01G176200 chr6D 76.957 1380 284 23 2734 4095 405484306 405482943 0.000000e+00 756
13 TraesCS7A01G176200 chr6D 87.146 529 63 4 1082 1609 405485283 405484759 3.400000e-166 595
14 TraesCS7A01G176200 chr6A 76.973 1381 282 25 2734 4095 551866152 551864789 0.000000e+00 756
15 TraesCS7A01G176200 chr6A 89.224 464 48 2 1147 1609 551867078 551866616 3.420000e-161 579
16 TraesCS7A01G176200 chr6B 76.828 1381 284 23 2734 4095 609381798 609380435 0.000000e+00 745
17 TraesCS7A01G176200 chr6B 89.009 464 49 2 1147 1609 609382695 609382233 1.590000e-159 573
18 TraesCS7A01G176200 chr6B 89.778 450 40 5 9 452 26217740 26218189 5.720000e-159 571
19 TraesCS7A01G176200 chr2B 90.222 450 38 6 9 452 175454603 175454154 2.640000e-162 582
20 TraesCS7A01G176200 chr2B 90.222 450 37 6 9 452 452910178 452910626 9.510000e-162 580
21 TraesCS7A01G176200 chr1B 90.222 450 38 5 9 452 589132453 589132902 2.640000e-162 582
22 TraesCS7A01G176200 chr1B 90.222 450 38 6 9 452 643024952 643025401 2.640000e-162 582
23 TraesCS7A01G176200 chr3D 89.556 450 41 5 9 452 607058666 607059115 2.660000e-157 566
24 TraesCS7A01G176200 chr2D 89.556 450 41 5 9 452 24439904 24439455 2.660000e-157 566
25 TraesCS7A01G176200 chr4A 99.091 220 2 0 2092 2311 682026609 682026828 3.700000e-106 396
26 TraesCS7A01G176200 chr4A 98.630 219 3 0 2093 2311 110878771 110878989 6.180000e-104 388
27 TraesCS7A01G176200 chr2A 98.190 221 4 0 2093 2313 61965591 61965811 2.220000e-103 387
28 TraesCS7A01G176200 chr3A 98.182 220 4 0 2093 2312 71142461 71142680 8.000000e-103 385
29 TraesCS7A01G176200 chr1A 96.943 229 7 0 2092 2320 21598589 21598361 8.000000e-103 385
30 TraesCS7A01G176200 chr1A 97.748 222 5 0 2093 2314 474261142 474261363 2.880000e-102 383
31 TraesCS7A01G176200 chr5A 97.738 221 5 0 2091 2311 693653995 693654215 1.030000e-101 381


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G176200 chr7A 129258578 129263671 5093 True 9407.000000 9407 100.000000 1 5094 1 chr7A.!!$R1 5093
1 TraesCS7A01G176200 chr7B 91659863 91664206 4343 True 1829.666667 3286 88.017667 560 5093 3 chr7B.!!$R1 4533
2 TraesCS7A01G176200 chr7D 130112322 130117536 5214 True 1186.400000 3201 88.562600 1 5042 5 chr7D.!!$R1 5041
3 TraesCS7A01G176200 chr6D 405482943 405485283 2340 True 675.500000 756 82.051500 1082 4095 2 chr6D.!!$R1 3013
4 TraesCS7A01G176200 chr6A 551864789 551867078 2289 True 667.500000 756 83.098500 1147 4095 2 chr6A.!!$R1 2948
5 TraesCS7A01G176200 chr6B 609380435 609382695 2260 True 659.000000 745 82.918500 1147 4095 2 chr6B.!!$R1 2948

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
386 394 0.107848 GTCATCCACGAACCCCGAAT 60.108 55.0 0.0 0.00 41.76 3.34 F
1828 2219 0.107017 TGCTGCTAGATTTCCCCAGC 60.107 55.0 0.0 8.73 46.68 4.85 F
1829 2220 0.107017 GCTGCTAGATTTCCCCAGCA 60.107 55.0 10.3 0.00 46.00 4.41 F
2299 2697 0.320421 GCACGCCCTGTAAACTGAGA 60.320 55.0 0.0 0.00 0.00 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2280 2678 0.320421 TCTCAGTTTACAGGGCGTGC 60.320 55.000 7.17 0.00 0.00 5.34 R
3640 4097 0.525668 AGTTCTTCACTATCGCGCCG 60.526 55.000 0.00 0.00 31.97 6.46 R
3844 4301 2.769209 AGCAGTCCCCTATCACTGAAT 58.231 47.619 3.24 0.00 42.37 2.57 R
4186 4643 0.104304 ACAAAACGACCAGCTCTCGT 59.896 50.000 9.68 9.68 46.20 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 27 8.546597 GTAACCAATTTTCTTTGCATGGTAAT 57.453 30.769 4.85 0.00 40.13 1.89
28 30 7.675062 ACCAATTTTCTTTGCATGGTAATACA 58.325 30.769 2.54 0.00 39.29 2.29
64 69 9.685276 ATCATAAGGATCAAAATACAAGTCACA 57.315 29.630 0.00 0.00 0.00 3.58
78 83 6.032956 ACAAGTCACATAAAGACCGACATA 57.967 37.500 0.00 0.00 36.68 2.29
92 97 6.725246 AGACCGACATAACAAAACTGAAAAG 58.275 36.000 0.00 0.00 0.00 2.27
99 104 9.846248 GACATAACAAAACTGAAAAGATAGCAT 57.154 29.630 0.00 0.00 0.00 3.79
112 117 7.440556 TGAAAAGATAGCATAACATCTCTGAGC 59.559 37.037 0.00 0.00 31.10 4.26
119 124 4.033817 GCATAACATCTCTGAGCTTGACAC 59.966 45.833 12.47 0.00 0.00 3.67
134 139 4.619227 CACCAACGCCCGTCACCT 62.619 66.667 0.00 0.00 0.00 4.00
149 154 2.348998 CCTGTCTCCAGCACCACC 59.651 66.667 0.00 0.00 37.38 4.61
152 157 1.762522 CTGTCTCCAGCACCACCACT 61.763 60.000 0.00 0.00 0.00 4.00
156 161 2.519063 CCAGCACCACCACTGCAA 60.519 61.111 0.00 0.00 37.08 4.08
157 162 2.723746 CAGCACCACCACTGCAAC 59.276 61.111 0.00 0.00 37.08 4.17
159 164 2.832661 GCACCACCACTGCAACCA 60.833 61.111 0.00 0.00 34.56 3.67
192 198 2.005960 GACGGATCACCTCCTCACCG 62.006 65.000 0.00 0.00 42.47 4.94
193 199 1.753078 CGGATCACCTCCTCACCGA 60.753 63.158 0.00 0.00 42.47 4.69
194 200 1.729470 CGGATCACCTCCTCACCGAG 61.729 65.000 0.00 0.00 42.47 4.63
195 201 0.395862 GGATCACCTCCTCACCGAGA 60.396 60.000 0.00 0.00 41.29 4.04
196 202 1.698506 GATCACCTCCTCACCGAGAT 58.301 55.000 0.00 0.00 30.97 2.75
197 203 1.611491 GATCACCTCCTCACCGAGATC 59.389 57.143 0.00 0.00 30.97 2.75
199 205 0.684479 CACCTCCTCACCGAGATCCA 60.684 60.000 0.00 0.00 30.97 3.41
200 206 0.684805 ACCTCCTCACCGAGATCCAC 60.685 60.000 0.00 0.00 30.97 4.02
201 207 0.684479 CCTCCTCACCGAGATCCACA 60.684 60.000 0.00 0.00 30.97 4.17
240 247 0.962356 CAGCTTTGCGGACCTCCAAT 60.962 55.000 0.00 0.00 35.14 3.16
241 248 0.618458 AGCTTTGCGGACCTCCAATA 59.382 50.000 0.00 0.00 35.14 1.90
242 249 1.212935 AGCTTTGCGGACCTCCAATAT 59.787 47.619 0.00 0.00 35.14 1.28
250 257 1.202818 GGACCTCCAATATGGCTCACC 60.203 57.143 0.00 0.00 37.47 4.02
295 303 1.779061 AATCAGACCGGGGCAACACT 61.779 55.000 6.32 0.00 38.54 3.55
305 313 3.712881 GCAACACTCCGGACACGC 61.713 66.667 0.00 0.00 39.22 5.34
308 316 2.879233 AACACTCCGGACACGCCAT 61.879 57.895 0.00 0.00 39.22 4.40
310 318 2.994995 ACTCCGGACACGCCATCA 60.995 61.111 0.00 0.00 39.22 3.07
315 323 1.234615 CCGGACACGCCATCAAACTT 61.235 55.000 0.00 0.00 39.22 2.66
324 332 3.264947 CGCCATCAAACTTCAGATCTGA 58.735 45.455 21.67 21.67 37.91 3.27
330 338 3.077359 CAAACTTCAGATCTGACACCCC 58.923 50.000 25.07 0.00 39.66 4.95
335 343 0.914644 CAGATCTGACACCCCACCAT 59.085 55.000 18.34 0.00 0.00 3.55
377 385 1.860641 ACCATACCTGTCATCCACGA 58.139 50.000 0.00 0.00 0.00 4.35
379 387 2.093658 ACCATACCTGTCATCCACGAAC 60.094 50.000 0.00 0.00 0.00 3.95
381 389 0.899720 TACCTGTCATCCACGAACCC 59.100 55.000 0.00 0.00 0.00 4.11
386 394 0.107848 GTCATCCACGAACCCCGAAT 60.108 55.000 0.00 0.00 41.76 3.34
389 397 1.979619 ATCCACGAACCCCGAATCCC 61.980 60.000 0.00 0.00 41.76 3.85
392 400 4.460683 CGAACCCCGAATCCCGCA 62.461 66.667 0.00 0.00 41.76 5.69
403 411 2.999739 AATCCCGCACACGTTCCGTT 63.000 55.000 0.00 0.00 38.32 4.44
406 414 1.062845 CCGCACACGTTCCGTTTTT 59.937 52.632 0.00 0.00 38.32 1.94
412 420 3.288242 CACACGTTCCGTTTTTCAGATG 58.712 45.455 0.00 0.00 38.32 2.90
424 432 2.362169 TTCAGATGTCGTCGATGCAA 57.638 45.000 0.00 0.00 0.00 4.08
427 435 1.061131 CAGATGTCGTCGATGCAAACC 59.939 52.381 0.00 0.00 0.00 3.27
465 473 5.570844 GCTCCTGGACTGTAACCAATTCTAA 60.571 44.000 0.00 0.00 36.95 2.10
470 478 8.047310 CCTGGACTGTAACCAATTCTAATACTT 58.953 37.037 0.00 0.00 36.95 2.24
499 507 4.647611 TCTTTTGCGGGTGAGAATTCTAA 58.352 39.130 8.25 0.00 0.00 2.10
521 529 2.221169 TCACTCGCTGAATGTGCTTTT 58.779 42.857 0.00 0.00 0.00 2.27
522 530 2.224079 TCACTCGCTGAATGTGCTTTTC 59.776 45.455 0.00 0.00 0.00 2.29
529 537 4.479619 GCTGAATGTGCTTTTCGATCTTT 58.520 39.130 0.00 0.00 0.00 2.52
530 538 5.631026 GCTGAATGTGCTTTTCGATCTTTA 58.369 37.500 0.00 0.00 0.00 1.85
531 539 6.261118 GCTGAATGTGCTTTTCGATCTTTAT 58.739 36.000 0.00 0.00 0.00 1.40
532 540 6.195983 GCTGAATGTGCTTTTCGATCTTTATG 59.804 38.462 0.00 0.00 0.00 1.90
534 542 7.243487 TGAATGTGCTTTTCGATCTTTATGTC 58.757 34.615 0.00 0.00 0.00 3.06
578 586 2.233271 AGTGTGAGATTTTGGCAGTGG 58.767 47.619 0.00 0.00 0.00 4.00
599 611 2.239907 GGAATATATGCCACCCTCCCTC 59.760 54.545 4.66 0.00 0.00 4.30
602 614 0.268869 ATATGCCACCCTCCCTCTCA 59.731 55.000 0.00 0.00 0.00 3.27
603 615 0.268869 TATGCCACCCTCCCTCTCAT 59.731 55.000 0.00 0.00 0.00 2.90
616 628 5.462398 CCTCCCTCTCATACGTTAATTTTCG 59.538 44.000 0.00 0.00 0.00 3.46
617 629 6.211587 TCCCTCTCATACGTTAATTTTCGA 57.788 37.500 0.00 0.00 0.00 3.71
618 630 6.270815 TCCCTCTCATACGTTAATTTTCGAG 58.729 40.000 0.00 0.00 0.00 4.04
632 644 3.343941 TTTCGAGGGGATAAACCAGTG 57.656 47.619 0.00 0.00 41.20 3.66
634 678 0.463833 CGAGGGGATAAACCAGTGGC 60.464 60.000 9.78 0.00 41.20 5.01
645 689 3.849563 AACCAGTGGCACAGTAAACTA 57.150 42.857 21.41 0.00 41.96 2.24
650 694 5.003804 CCAGTGGCACAGTAAACTATTCTT 58.996 41.667 21.41 0.00 41.96 2.52
651 695 5.106555 CCAGTGGCACAGTAAACTATTCTTG 60.107 44.000 21.41 3.61 41.96 3.02
652 696 5.470098 CAGTGGCACAGTAAACTATTCTTGT 59.530 40.000 21.41 0.00 41.96 3.16
653 697 6.649141 CAGTGGCACAGTAAACTATTCTTGTA 59.351 38.462 21.41 0.00 41.96 2.41
654 698 6.649557 AGTGGCACAGTAAACTATTCTTGTAC 59.350 38.462 21.41 0.00 42.13 2.90
655 699 6.425721 GTGGCACAGTAAACTATTCTTGTACA 59.574 38.462 13.86 0.00 41.80 2.90
656 700 6.649141 TGGCACAGTAAACTATTCTTGTACAG 59.351 38.462 0.00 0.00 0.00 2.74
657 701 6.649557 GGCACAGTAAACTATTCTTGTACAGT 59.350 38.462 0.00 0.00 0.00 3.55
658 702 7.816031 GGCACAGTAAACTATTCTTGTACAGTA 59.184 37.037 0.00 0.00 0.00 2.74
714 758 4.281688 AGAAAGTACACAAAGGTACGCCTA 59.718 41.667 0.00 0.00 46.33 3.93
755 799 3.028094 ACCCTCTGCCGAAATACTCTA 57.972 47.619 0.00 0.00 0.00 2.43
756 800 2.694109 ACCCTCTGCCGAAATACTCTAC 59.306 50.000 0.00 0.00 0.00 2.59
757 801 2.959707 CCCTCTGCCGAAATACTCTACT 59.040 50.000 0.00 0.00 0.00 2.57
758 802 4.142790 CCCTCTGCCGAAATACTCTACTA 58.857 47.826 0.00 0.00 0.00 1.82
759 803 4.216687 CCCTCTGCCGAAATACTCTACTAG 59.783 50.000 0.00 0.00 0.00 2.57
760 804 4.822896 CCTCTGCCGAAATACTCTACTAGT 59.177 45.833 0.00 0.00 42.62 2.57
761 805 5.996513 CCTCTGCCGAAATACTCTACTAGTA 59.003 44.000 1.89 1.89 44.76 1.82
762 806 6.148150 CCTCTGCCGAAATACTCTACTAGTAG 59.852 46.154 21.87 21.87 43.90 2.57
787 831 8.325046 AGTACTCTGCTGGAAGAGAAAAATAAT 58.675 33.333 12.17 0.00 45.59 1.28
790 834 9.692325 ACTCTGCTGGAAGAGAAAAATAATAAT 57.308 29.630 12.17 0.00 45.59 1.28
880 927 2.074576 CCAGTCTCACATGAGCACTTG 58.925 52.381 0.00 2.21 41.80 3.16
888 935 3.951769 ATGAGCACTTGCCCCCAGC 62.952 63.158 0.00 0.00 43.38 4.85
967 1303 4.008933 CGCCTCCGATCCCATCCC 62.009 72.222 0.00 0.00 36.29 3.85
969 1305 2.122413 CCTCCGATCCCATCCCCA 60.122 66.667 0.00 0.00 0.00 4.96
970 1306 2.520536 CCTCCGATCCCATCCCCAC 61.521 68.421 0.00 0.00 0.00 4.61
971 1307 2.447765 TCCGATCCCATCCCCACC 60.448 66.667 0.00 0.00 0.00 4.61
972 1308 3.570212 CCGATCCCATCCCCACCC 61.570 72.222 0.00 0.00 0.00 4.61
973 1309 3.570212 CGATCCCATCCCCACCCC 61.570 72.222 0.00 0.00 0.00 4.95
1050 1386 3.179265 CCGACGCACATGTCCGAC 61.179 66.667 17.67 9.09 35.40 4.79
1078 1414 4.150454 CGGGCTCCTCCTCCTCCT 62.150 72.222 0.00 0.00 34.39 3.69
1079 1415 2.123033 GGGCTCCTCCTCCTCCTC 60.123 72.222 0.00 0.00 34.39 3.71
1683 2039 1.554042 CCGTTGACTTCGGGTTGACG 61.554 60.000 0.00 0.00 43.68 4.35
1694 2051 2.480555 GTTGACGCTGCGATTGGG 59.519 61.111 30.47 0.00 0.00 4.12
1707 2064 1.747355 CGATTGGGATTGAAAGCTGCT 59.253 47.619 0.00 0.00 0.00 4.24
1713 2070 1.615384 GGATTGAAAGCTGCTGGAGGT 60.615 52.381 1.35 0.00 0.00 3.85
1735 2092 2.079158 TGAATCTTTGCAGCCTTCTCG 58.921 47.619 0.00 0.00 0.00 4.04
1741 2098 2.581953 GCAGCCTTCTCGCTCTCG 60.582 66.667 0.00 0.00 36.82 4.04
1765 2148 0.376152 CGCGCGGTTCTCTAGTTCTA 59.624 55.000 24.84 0.00 0.00 2.10
1766 2149 1.002684 CGCGCGGTTCTCTAGTTCTAT 60.003 52.381 24.84 0.00 0.00 1.98
1767 2150 2.386249 GCGCGGTTCTCTAGTTCTATG 58.614 52.381 8.83 0.00 0.00 2.23
1769 2152 2.223502 CGCGGTTCTCTAGTTCTATGCA 60.224 50.000 0.00 0.00 0.00 3.96
1770 2153 3.117046 GCGGTTCTCTAGTTCTATGCAC 58.883 50.000 0.00 0.00 0.00 4.57
1771 2154 3.364062 CGGTTCTCTAGTTCTATGCACG 58.636 50.000 0.00 0.00 0.00 5.34
1774 2157 4.380655 GGTTCTCTAGTTCTATGCACGTGT 60.381 45.833 18.38 0.00 0.00 4.49
1775 2158 4.357018 TCTCTAGTTCTATGCACGTGTG 57.643 45.455 18.38 5.60 0.00 3.82
1801 2185 3.255642 TGCCATTCTTTAGCTTGTTGTCC 59.744 43.478 0.00 0.00 0.00 4.02
1802 2186 3.255642 GCCATTCTTTAGCTTGTTGTCCA 59.744 43.478 0.00 0.00 0.00 4.02
1822 2213 5.574443 GTCCAATGTTTTGCTGCTAGATTTC 59.426 40.000 0.00 0.00 0.00 2.17
1824 2215 4.725790 ATGTTTTGCTGCTAGATTTCCC 57.274 40.909 0.00 0.00 0.00 3.97
1826 2217 2.825532 GTTTTGCTGCTAGATTTCCCCA 59.174 45.455 0.00 0.00 0.00 4.96
1827 2218 2.425143 TTGCTGCTAGATTTCCCCAG 57.575 50.000 0.00 0.00 0.00 4.45
1828 2219 0.107017 TGCTGCTAGATTTCCCCAGC 60.107 55.000 0.00 8.73 46.68 4.85
1829 2220 0.107017 GCTGCTAGATTTCCCCAGCA 60.107 55.000 10.30 0.00 46.00 4.41
1830 2221 1.478288 GCTGCTAGATTTCCCCAGCAT 60.478 52.381 10.30 0.00 46.00 3.79
1831 2222 2.224621 GCTGCTAGATTTCCCCAGCATA 60.225 50.000 10.30 0.00 46.00 3.14
1832 2223 3.560882 GCTGCTAGATTTCCCCAGCATAT 60.561 47.826 10.30 0.00 46.00 1.78
1883 2274 7.549134 TGAACTCAAAATATATCTTGACGTGCT 59.451 33.333 0.00 0.00 0.00 4.40
1897 2291 5.045668 TGACGTGCTAAGTTTGATACGTA 57.954 39.130 15.66 0.00 43.69 3.57
1918 2312 4.715520 ATTCGTACTAATGATGCTTGCG 57.284 40.909 0.00 0.00 0.00 4.85
1919 2313 1.858458 TCGTACTAATGATGCTTGCGC 59.142 47.619 0.00 0.00 0.00 6.09
2017 2415 9.601810 AAAATTAAATCCTGGGTAGGGAATATC 57.398 33.333 0.00 0.00 44.70 1.63
2031 2429 8.857098 GGTAGGGAATATCGCAGTTCATATATA 58.143 37.037 0.00 0.00 0.00 0.86
2066 2464 5.464069 ACCTGAAACTTTTAATGGGTCCTT 58.536 37.500 0.00 0.00 0.00 3.36
2073 2471 5.390387 ACTTTTAATGGGTCCTTGTTAGCA 58.610 37.500 0.00 0.00 0.00 3.49
2081 2479 2.224793 GGTCCTTGTTAGCAAACTCCCT 60.225 50.000 0.00 0.00 36.51 4.20
2084 2482 3.077359 CCTTGTTAGCAAACTCCCTCTG 58.923 50.000 0.00 0.00 36.51 3.35
2094 2492 4.870991 GCAAACTCCCTCTGTCTGTAATAC 59.129 45.833 0.00 0.00 0.00 1.89
2095 2493 5.337652 GCAAACTCCCTCTGTCTGTAATACT 60.338 44.000 0.00 0.00 0.00 2.12
2096 2494 6.127423 GCAAACTCCCTCTGTCTGTAATACTA 60.127 42.308 0.00 0.00 0.00 1.82
2098 2496 5.447757 ACTCCCTCTGTCTGTAATACTACC 58.552 45.833 0.00 0.00 0.00 3.18
2099 2497 5.194132 ACTCCCTCTGTCTGTAATACTACCT 59.806 44.000 0.00 0.00 0.00 3.08
2100 2498 5.692928 TCCCTCTGTCTGTAATACTACCTC 58.307 45.833 0.00 0.00 0.00 3.85
2102 2500 4.515944 CCTCTGTCTGTAATACTACCTCCG 59.484 50.000 0.00 0.00 0.00 4.63
2103 2501 5.108187 TCTGTCTGTAATACTACCTCCGT 57.892 43.478 0.00 0.00 0.00 4.69
2104 2502 5.503927 TCTGTCTGTAATACTACCTCCGTT 58.496 41.667 0.00 0.00 0.00 4.44
2105 2503 5.948162 TCTGTCTGTAATACTACCTCCGTTT 59.052 40.000 0.00 0.00 0.00 3.60
2106 2504 6.094603 TCTGTCTGTAATACTACCTCCGTTTC 59.905 42.308 0.00 0.00 0.00 2.78
2107 2505 5.711506 TGTCTGTAATACTACCTCCGTTTCA 59.288 40.000 0.00 0.00 0.00 2.69
2108 2506 6.127814 TGTCTGTAATACTACCTCCGTTTCAG 60.128 42.308 0.00 0.00 0.00 3.02
2111 2509 6.996509 TGTAATACTACCTCCGTTTCAGTTT 58.003 36.000 0.00 0.00 0.00 2.66
2112 2510 8.121305 TGTAATACTACCTCCGTTTCAGTTTA 57.879 34.615 0.00 0.00 0.00 2.01
2116 2514 9.813446 AATACTACCTCCGTTTCAGTTTATAAG 57.187 33.333 0.00 0.00 0.00 1.73
2119 2517 5.485620 ACCTCCGTTTCAGTTTATAAGTCC 58.514 41.667 0.00 0.00 0.00 3.85
2120 2518 5.247792 ACCTCCGTTTCAGTTTATAAGTCCT 59.752 40.000 0.00 0.00 0.00 3.85
2121 2519 6.438425 ACCTCCGTTTCAGTTTATAAGTCCTA 59.562 38.462 0.00 0.00 0.00 2.94
2122 2520 6.755607 CCTCCGTTTCAGTTTATAAGTCCTAC 59.244 42.308 0.00 0.00 0.00 3.18
2124 2522 5.005107 CCGTTTCAGTTTATAAGTCCTACGC 59.995 44.000 0.00 0.00 0.00 4.42
2125 2523 5.275602 CGTTTCAGTTTATAAGTCCTACGCG 60.276 44.000 3.53 3.53 0.00 6.01
2127 2525 6.435430 TTCAGTTTATAAGTCCTACGCGTA 57.565 37.500 19.40 19.40 0.00 4.42
2129 2527 7.728847 TCAGTTTATAAGTCCTACGCGTATA 57.271 36.000 20.91 9.25 0.00 1.47
2130 2528 7.576236 TCAGTTTATAAGTCCTACGCGTATAC 58.424 38.462 20.91 19.74 0.00 1.47
2131 2529 6.798959 CAGTTTATAAGTCCTACGCGTATACC 59.201 42.308 20.91 10.04 0.00 2.73
2132 2530 6.712547 AGTTTATAAGTCCTACGCGTATACCT 59.287 38.462 20.91 12.94 0.00 3.08
2133 2531 7.878127 AGTTTATAAGTCCTACGCGTATACCTA 59.122 37.037 20.91 14.60 0.00 3.08
2134 2532 7.834068 TTATAAGTCCTACGCGTATACCTAG 57.166 40.000 20.91 8.56 0.00 3.02
2135 2533 3.051081 AGTCCTACGCGTATACCTAGG 57.949 52.381 20.91 18.03 0.00 3.02
2136 2534 2.370189 AGTCCTACGCGTATACCTAGGT 59.630 50.000 20.91 20.57 0.00 3.08
2137 2535 3.142174 GTCCTACGCGTATACCTAGGTT 58.858 50.000 22.11 10.62 0.00 3.50
2138 2536 3.058639 GTCCTACGCGTATACCTAGGTTG 60.059 52.174 22.11 9.15 0.00 3.77
2140 2538 0.386838 ACGCGTATACCTAGGTTGCC 59.613 55.000 22.11 7.02 0.00 4.52
2141 2539 0.386476 CGCGTATACCTAGGTTGCCA 59.614 55.000 22.11 1.21 0.00 4.92
2142 2540 1.202440 CGCGTATACCTAGGTTGCCAA 60.202 52.381 22.11 0.75 0.00 4.52
2143 2541 2.547218 CGCGTATACCTAGGTTGCCAAT 60.547 50.000 22.11 9.64 0.00 3.16
2145 2543 3.881089 GCGTATACCTAGGTTGCCAATTT 59.119 43.478 22.11 0.00 0.00 1.82
2147 2545 5.528320 GCGTATACCTAGGTTGCCAATTTTA 59.472 40.000 22.11 0.00 0.00 1.52
2148 2546 6.206048 GCGTATACCTAGGTTGCCAATTTTAT 59.794 38.462 22.11 5.71 0.00 1.40
2149 2547 7.572539 GCGTATACCTAGGTTGCCAATTTTATC 60.573 40.741 22.11 0.00 0.00 1.75
2151 2549 5.914898 ACCTAGGTTGCCAATTTTATCAC 57.085 39.130 9.21 0.00 0.00 3.06
2154 2552 5.422012 CCTAGGTTGCCAATTTTATCACCTT 59.578 40.000 0.00 0.00 0.00 3.50
2155 2553 6.605594 CCTAGGTTGCCAATTTTATCACCTTA 59.394 38.462 0.00 0.00 0.00 2.69
2158 2556 8.602472 AGGTTGCCAATTTTATCACCTTAATA 57.398 30.769 0.00 0.00 0.00 0.98
2265 2663 9.887406 ACTTGTATTAAGTTGGTCAAATTAACG 57.113 29.630 15.42 7.39 41.57 3.18
2267 2665 9.881529 TTGTATTAAGTTGGTCAAATTAACGAC 57.118 29.630 15.42 15.60 41.57 4.34
2274 2672 3.538591 GGTCAAATTAACGACCTAGGGG 58.461 50.000 14.81 7.16 46.83 4.79
2275 2673 2.941064 GTCAAATTAACGACCTAGGGGC 59.059 50.000 14.81 3.61 35.63 5.80
2276 2674 2.572556 TCAAATTAACGACCTAGGGGCA 59.427 45.455 14.81 0.00 35.63 5.36
2277 2675 2.681344 CAAATTAACGACCTAGGGGCAC 59.319 50.000 14.81 0.66 35.63 5.01
2278 2676 0.462789 ATTAACGACCTAGGGGCACG 59.537 55.000 14.81 14.81 39.93 5.34
2279 2677 2.229690 TTAACGACCTAGGGGCACGC 62.230 60.000 14.81 0.00 43.76 5.34
2293 2691 4.973055 ACGCGCACGCCCTGTAAA 62.973 61.111 5.73 0.00 45.53 2.01
2294 2692 4.439472 CGCGCACGCCCTGTAAAC 62.439 66.667 8.75 0.00 37.98 2.01
2295 2693 3.047877 GCGCACGCCCTGTAAACT 61.048 61.111 0.30 0.00 34.56 2.66
2296 2694 2.860293 CGCACGCCCTGTAAACTG 59.140 61.111 0.00 0.00 0.00 3.16
2297 2695 1.666553 CGCACGCCCTGTAAACTGA 60.667 57.895 0.00 0.00 0.00 3.41
2298 2696 1.626654 CGCACGCCCTGTAAACTGAG 61.627 60.000 0.00 0.00 0.00 3.35
2299 2697 0.320421 GCACGCCCTGTAAACTGAGA 60.320 55.000 0.00 0.00 0.00 3.27
2300 2698 1.714794 CACGCCCTGTAAACTGAGAG 58.285 55.000 0.00 0.00 0.00 3.20
2301 2699 1.272490 CACGCCCTGTAAACTGAGAGA 59.728 52.381 0.00 0.00 0.00 3.10
2302 2700 1.546476 ACGCCCTGTAAACTGAGAGAG 59.454 52.381 0.00 0.00 0.00 3.20
2303 2701 1.819288 CGCCCTGTAAACTGAGAGAGA 59.181 52.381 0.00 0.00 0.00 3.10
2304 2702 2.159310 CGCCCTGTAAACTGAGAGAGAG 60.159 54.545 0.00 0.00 0.00 3.20
2308 2706 4.642885 CCCTGTAAACTGAGAGAGAGGTAG 59.357 50.000 0.00 0.00 0.00 3.18
2312 2710 7.255199 TGTAAACTGAGAGAGAGGTAGTAGA 57.745 40.000 0.00 0.00 0.00 2.59
2320 2718 6.378564 TGAGAGAGAGGTAGTAGACAATTTGG 59.621 42.308 0.78 0.00 0.00 3.28
2321 2719 6.257586 AGAGAGAGGTAGTAGACAATTTGGT 58.742 40.000 0.78 0.00 0.00 3.67
2322 2720 7.411808 AGAGAGAGGTAGTAGACAATTTGGTA 58.588 38.462 0.78 0.00 0.00 3.25
2350 2748 2.459060 TTGCATTTGTGGCAATCCAG 57.541 45.000 0.00 0.00 45.57 3.86
2351 2749 1.340088 TGCATTTGTGGCAATCCAGT 58.660 45.000 0.00 0.00 44.48 4.00
2378 2776 5.896073 ACTCCCTCCTTCCAAATATGTAG 57.104 43.478 0.00 0.00 0.00 2.74
2561 2964 3.507622 AGTTAGGCTCAAAGTTTGATGGC 59.492 43.478 18.35 20.94 39.30 4.40
2614 3017 6.886307 GCTTAATGCTTATCTACTTCAGCAG 58.114 40.000 0.00 0.00 45.20 4.24
2666 3069 3.425577 TGTGCTTGTTTCTCTTGCTTG 57.574 42.857 0.00 0.00 0.00 4.01
2706 3110 1.103803 GGAGTCGAGTGTGGCATCTA 58.896 55.000 0.00 0.00 0.00 1.98
2883 3290 2.291540 CCCATTCAACTTTGAGGCCCTA 60.292 50.000 0.00 0.00 38.61 3.53
2935 3342 2.591715 GGCTGCGTGTGAACCACT 60.592 61.111 0.00 0.00 42.20 4.00
3075 3482 0.538057 CACCCTCTTTTGCAGCCTCA 60.538 55.000 0.00 0.00 0.00 3.86
3102 3509 2.327325 TAGTCTGCCTCTCTGGGTTT 57.673 50.000 0.00 0.00 36.00 3.27
3269 3676 9.895138 GGTAGGTCCATACTCTTATTTGTTTTA 57.105 33.333 0.00 0.00 35.97 1.52
3345 3802 5.488341 TCTGGTTTAGGTTCTTGATACTGC 58.512 41.667 0.00 0.00 0.00 4.40
3356 3813 3.134623 TCTTGATACTGCGGGTGATGAAT 59.865 43.478 0.00 0.00 0.00 2.57
3640 4097 2.189499 GCCCATGGATGACGGCTTC 61.189 63.158 15.22 0.00 38.41 3.86
3844 4301 2.392662 CTTGAGGTCAGAGATAGCCCA 58.607 52.381 0.00 0.00 0.00 5.36
3853 4310 4.040217 GTCAGAGATAGCCCATTCAGTGAT 59.960 45.833 0.00 0.00 0.00 3.06
3860 4317 1.202818 GCCCATTCAGTGATAGGGGAC 60.203 57.143 24.32 13.92 39.96 4.46
3872 4329 1.145571 TAGGGGACTGCTTTGTGGTT 58.854 50.000 0.00 0.00 43.88 3.67
4018 4475 4.430441 AGGATAAGGTGGAAACAGAGACT 58.570 43.478 0.00 0.00 44.46 3.24
4042 4499 5.352016 TGTTGATAAATTGTACCTGTACCGC 59.648 40.000 5.07 0.00 35.26 5.68
4069 4526 4.380945 GGGCCAAGGGGTGATGCA 62.381 66.667 4.39 0.00 36.17 3.96
4098 4555 7.148590 GCCATTGGTGAAAATTTTGTAGTCATC 60.149 37.037 8.47 0.53 0.00 2.92
4186 4643 6.778821 TCATCCTTGTTCTGTTATTCCTGAA 58.221 36.000 0.00 0.00 0.00 3.02
4227 4687 6.353323 TGTGTTCTTGATCAAGTTAACTGGA 58.647 36.000 29.80 15.11 39.38 3.86
4233 4693 6.032820 CTTGATCAAGTTAACTGGAGCCAGT 61.033 44.000 24.65 16.19 44.35 4.00
4276 4736 4.524328 AGGGTTTTCATGATTTCACAGGAC 59.476 41.667 0.00 0.00 30.45 3.85
4277 4737 4.475944 GGTTTTCATGATTTCACAGGACG 58.524 43.478 0.00 0.00 30.45 4.79
4281 4742 2.483877 TCATGATTTCACAGGACGCAAC 59.516 45.455 0.00 0.00 0.00 4.17
4282 4743 1.960417 TGATTTCACAGGACGCAACA 58.040 45.000 0.00 0.00 0.00 3.33
4287 4748 2.535012 TCACAGGACGCAACAATGTA 57.465 45.000 0.00 0.00 0.00 2.29
4289 4750 3.407698 TCACAGGACGCAACAATGTATT 58.592 40.909 0.00 0.00 0.00 1.89
4295 4756 5.965334 CAGGACGCAACAATGTATTATTCAC 59.035 40.000 0.00 0.00 0.00 3.18
4298 4759 5.879237 ACGCAACAATGTATTATTCACTGG 58.121 37.500 0.00 0.00 0.00 4.00
4301 4762 6.265577 GCAACAATGTATTATTCACTGGACC 58.734 40.000 0.00 0.00 0.00 4.46
4318 4779 2.436646 CGAAGGAGCACCGGCATT 60.437 61.111 0.00 0.00 44.61 3.56
4319 4780 2.753966 CGAAGGAGCACCGGCATTG 61.754 63.158 0.00 0.00 44.61 2.82
4320 4781 3.056313 GAAGGAGCACCGGCATTGC 62.056 63.158 0.00 3.86 44.61 3.56
4326 4787 2.100216 CACCGGCATTGCTTACGC 59.900 61.111 8.82 0.00 0.00 4.42
4327 4788 3.496131 ACCGGCATTGCTTACGCG 61.496 61.111 3.53 3.53 39.65 6.01
4330 4791 2.021380 GGCATTGCTTACGCGTCG 59.979 61.111 18.63 9.93 39.65 5.12
4332 4793 2.775423 CATTGCTTACGCGTCGCA 59.225 55.556 26.00 26.00 39.65 5.10
4333 4794 1.131623 CATTGCTTACGCGTCGCAA 59.868 52.632 35.11 35.11 46.25 4.85
4334 4795 1.120147 CATTGCTTACGCGTCGCAAC 61.120 55.000 35.50 17.43 45.19 4.17
4347 4808 3.933740 GTCGCAACGAATTCACAATTG 57.066 42.857 3.24 3.24 37.72 2.32
4348 4809 3.296628 GTCGCAACGAATTCACAATTGT 58.703 40.909 4.92 4.92 37.72 2.71
4349 4810 3.728718 GTCGCAACGAATTCACAATTGTT 59.271 39.130 8.77 0.00 37.72 2.83
4352 4818 4.087085 CGCAACGAATTCACAATTGTTCTC 59.913 41.667 8.77 2.42 0.00 2.87
4409 4875 5.847111 GGTACCTCACTACATGTGTATCA 57.153 43.478 9.11 0.00 46.27 2.15
4410 4876 6.406692 GGTACCTCACTACATGTGTATCAT 57.593 41.667 9.11 0.00 46.27 2.45
4431 4897 7.569016 ATCATCTTGATCAGCATCTGCTATGC 61.569 42.308 14.49 14.49 40.63 3.14
4437 4904 1.670406 GCATCTGCTATGCCGGGAG 60.670 63.158 2.18 0.00 39.01 4.30
4452 4919 1.528129 GGGAGCAGTTGAAGACAAGG 58.472 55.000 0.00 0.00 36.64 3.61
4461 4928 5.251764 CAGTTGAAGACAAGGGAATCAGAT 58.748 41.667 0.00 0.00 36.64 2.90
4463 4930 5.942826 AGTTGAAGACAAGGGAATCAGATTC 59.057 40.000 14.09 14.09 36.64 2.52
4473 4940 2.978452 AATCAGATTCCGGCCTCGCG 62.978 60.000 0.00 0.00 34.56 5.87
4474 4941 4.514577 CAGATTCCGGCCTCGCGT 62.515 66.667 5.77 0.00 34.56 6.01
4483 4950 4.933064 GCCTCGCGTCGATCCCAG 62.933 72.222 5.77 0.00 34.61 4.45
4487 4958 0.311165 CTCGCGTCGATCCCAGTATT 59.689 55.000 5.77 0.00 34.61 1.89
4488 4959 0.030235 TCGCGTCGATCCCAGTATTG 59.970 55.000 5.77 0.00 0.00 1.90
4489 4960 1.548973 CGCGTCGATCCCAGTATTGC 61.549 60.000 0.00 0.00 0.00 3.56
4494 4965 0.940126 CGATCCCAGTATTGCAGCAC 59.060 55.000 0.00 0.00 0.00 4.40
4495 4966 1.743431 CGATCCCAGTATTGCAGCACA 60.743 52.381 0.00 0.00 0.00 4.57
4502 4973 2.031807 CAGTATTGCAGCACAGATGAGC 59.968 50.000 0.00 0.00 0.00 4.26
4521 4992 0.609957 CAGGGGCTGATTGCACTCAA 60.610 55.000 8.22 0.00 46.25 3.02
4535 5006 2.600731 CACTCAAGAGTCCAGTTAGCG 58.399 52.381 0.00 0.00 40.20 4.26
4536 5007 1.067495 ACTCAAGAGTCCAGTTAGCGC 60.067 52.381 0.00 0.00 36.92 5.92
4537 5008 1.203523 CTCAAGAGTCCAGTTAGCGCT 59.796 52.381 17.26 17.26 0.00 5.92
4539 5010 1.996191 CAAGAGTCCAGTTAGCGCTTC 59.004 52.381 18.68 9.96 0.00 3.86
4541 5012 1.203523 AGAGTCCAGTTAGCGCTTCTG 59.796 52.381 25.30 25.30 0.00 3.02
4542 5013 0.969894 AGTCCAGTTAGCGCTTCTGT 59.030 50.000 27.82 15.27 0.00 3.41
4543 5014 1.344763 AGTCCAGTTAGCGCTTCTGTT 59.655 47.619 27.82 16.89 0.00 3.16
4544 5015 2.143925 GTCCAGTTAGCGCTTCTGTTT 58.856 47.619 27.82 5.15 0.00 2.83
4545 5016 2.157863 GTCCAGTTAGCGCTTCTGTTTC 59.842 50.000 27.82 18.56 0.00 2.78
4546 5017 2.143122 CCAGTTAGCGCTTCTGTTTCA 58.857 47.619 27.82 5.06 0.00 2.69
4547 5018 2.744202 CCAGTTAGCGCTTCTGTTTCAT 59.256 45.455 27.82 3.19 0.00 2.57
4548 5019 3.181516 CCAGTTAGCGCTTCTGTTTCATC 60.182 47.826 27.82 6.93 0.00 2.92
4549 5020 3.003480 AGTTAGCGCTTCTGTTTCATCC 58.997 45.455 18.68 0.00 0.00 3.51
4550 5021 2.742053 GTTAGCGCTTCTGTTTCATCCA 59.258 45.455 18.68 0.00 0.00 3.41
4564 5105 2.675583 TCATCCATCCAGACAGAGGAG 58.324 52.381 0.00 0.00 38.83 3.69
4566 5107 1.857965 TCCATCCAGACAGAGGAGTG 58.142 55.000 0.00 0.00 38.83 3.51
4567 5108 0.829333 CCATCCAGACAGAGGAGTGG 59.171 60.000 0.00 0.00 38.83 4.00
4568 5109 0.829333 CATCCAGACAGAGGAGTGGG 59.171 60.000 0.00 0.00 38.83 4.61
4569 5110 0.980231 ATCCAGACAGAGGAGTGGGC 60.980 60.000 0.00 0.00 38.83 5.36
4576 5117 2.233566 AGAGGAGTGGGCATGCCAA 61.234 57.895 36.56 25.95 37.98 4.52
4585 5127 1.207570 TGGGCATGCCAATGTGAATTC 59.792 47.619 36.56 16.35 36.08 2.17
4587 5129 1.207570 GGCATGCCAATGTGAATTCCA 59.792 47.619 32.08 0.97 36.08 3.53
4588 5130 2.273557 GCATGCCAATGTGAATTCCAC 58.726 47.619 6.36 2.27 45.88 4.02
4592 5134 2.821378 TGCCAATGTGAATTCCACTCTG 59.179 45.455 2.27 3.78 45.86 3.35
4595 5137 4.264253 CCAATGTGAATTCCACTCTGCTA 58.736 43.478 2.27 0.00 45.86 3.49
4596 5138 4.095483 CCAATGTGAATTCCACTCTGCTAC 59.905 45.833 2.27 0.00 45.86 3.58
4601 5143 3.118261 TGAATTCCACTCTGCTACCATCC 60.118 47.826 2.27 0.00 0.00 3.51
4603 5145 2.180946 TCCACTCTGCTACCATCCAT 57.819 50.000 0.00 0.00 0.00 3.41
4604 5146 1.764723 TCCACTCTGCTACCATCCATG 59.235 52.381 0.00 0.00 0.00 3.66
4605 5147 1.487976 CCACTCTGCTACCATCCATGT 59.512 52.381 0.00 0.00 0.00 3.21
4606 5148 2.700371 CCACTCTGCTACCATCCATGTA 59.300 50.000 0.00 0.00 0.00 2.29
4607 5149 3.493350 CCACTCTGCTACCATCCATGTAC 60.493 52.174 0.00 0.00 0.00 2.90
4608 5150 3.386078 CACTCTGCTACCATCCATGTACT 59.614 47.826 0.00 0.00 0.00 2.73
4609 5151 4.033709 ACTCTGCTACCATCCATGTACTT 58.966 43.478 0.00 0.00 0.00 2.24
4610 5152 4.141846 ACTCTGCTACCATCCATGTACTTG 60.142 45.833 1.78 1.78 0.00 3.16
4611 5153 3.774766 TCTGCTACCATCCATGTACTTGT 59.225 43.478 7.86 0.00 0.00 3.16
4613 5155 2.614057 GCTACCATCCATGTACTTGTGC 59.386 50.000 7.86 0.00 0.00 4.57
4614 5156 3.682718 GCTACCATCCATGTACTTGTGCT 60.683 47.826 7.86 0.00 0.00 4.40
4615 5157 3.439857 ACCATCCATGTACTTGTGCTT 57.560 42.857 7.86 0.00 0.00 3.91
4616 5158 4.568072 ACCATCCATGTACTTGTGCTTA 57.432 40.909 7.86 0.00 0.00 3.09
4618 5160 4.225042 ACCATCCATGTACTTGTGCTTAGA 59.775 41.667 7.86 0.00 0.00 2.10
4651 5206 3.258372 GGTAAAAGAAAGCCTCCCCTTTG 59.742 47.826 0.00 0.00 35.31 2.77
4652 5207 2.775490 AAAGAAAGCCTCCCCTTTGT 57.225 45.000 0.00 0.00 35.31 2.83
4655 5210 2.319844 AGAAAGCCTCCCCTTTGTTTG 58.680 47.619 0.00 0.00 35.31 2.93
4656 5211 2.039418 GAAAGCCTCCCCTTTGTTTGT 58.961 47.619 0.00 0.00 35.31 2.83
4657 5212 3.117284 AGAAAGCCTCCCCTTTGTTTGTA 60.117 43.478 0.00 0.00 35.31 2.41
4658 5213 2.287977 AGCCTCCCCTTTGTTTGTAC 57.712 50.000 0.00 0.00 0.00 2.90
4674 5234 1.822990 TGTACTTTGTAGCCTCCCTCG 59.177 52.381 0.00 0.00 0.00 4.63
4679 5239 0.039180 TTGTAGCCTCCCTCGAGACA 59.961 55.000 15.71 5.30 38.52 3.41
4699 5273 7.346751 AGACATTGTTGTTTTTGTAGACCAT 57.653 32.000 0.00 0.00 35.79 3.55
4700 5274 7.781056 AGACATTGTTGTTTTTGTAGACCATT 58.219 30.769 0.00 0.00 35.79 3.16
4733 5307 9.846248 ATTATCTCTTGTTACATTCAACTTTGC 57.154 29.630 0.00 0.00 0.00 3.68
4767 5341 1.902508 TGCTGAGAACTACCCAAGGAG 59.097 52.381 0.00 0.00 0.00 3.69
4824 5398 8.461249 TTCATCCTACTACTACCACAACTATC 57.539 38.462 0.00 0.00 0.00 2.08
4828 5402 6.264744 TCCTACTACTACCACAACTATCATGC 59.735 42.308 0.00 0.00 0.00 4.06
4852 5441 0.322456 TGCCAACTGTCATAGCCACC 60.322 55.000 0.00 0.00 0.00 4.61
4853 5442 1.032114 GCCAACTGTCATAGCCACCC 61.032 60.000 0.00 0.00 0.00 4.61
4854 5443 0.394352 CCAACTGTCATAGCCACCCC 60.394 60.000 0.00 0.00 0.00 4.95
4855 5444 0.620556 CAACTGTCATAGCCACCCCT 59.379 55.000 0.00 0.00 0.00 4.79
4856 5445 0.912486 AACTGTCATAGCCACCCCTC 59.088 55.000 0.00 0.00 0.00 4.30
4857 5446 0.252696 ACTGTCATAGCCACCCCTCA 60.253 55.000 0.00 0.00 0.00 3.86
4858 5447 1.135094 CTGTCATAGCCACCCCTCAT 58.865 55.000 0.00 0.00 0.00 2.90
4859 5448 1.492176 CTGTCATAGCCACCCCTCATT 59.508 52.381 0.00 0.00 0.00 2.57
4860 5449 1.212688 TGTCATAGCCACCCCTCATTG 59.787 52.381 0.00 0.00 0.00 2.82
4862 5451 1.922447 TCATAGCCACCCCTCATTGTT 59.078 47.619 0.00 0.00 0.00 2.83
4863 5452 2.026641 CATAGCCACCCCTCATTGTTG 58.973 52.381 0.00 0.00 0.00 3.33
4864 5453 0.323360 TAGCCACCCCTCATTGTTGC 60.323 55.000 0.00 0.00 0.00 4.17
4865 5454 2.649129 GCCACCCCTCATTGTTGCC 61.649 63.158 0.00 0.00 0.00 4.52
4866 5455 1.228831 CCACCCCTCATTGTTGCCA 60.229 57.895 0.00 0.00 0.00 4.92
4867 5456 1.535204 CCACCCCTCATTGTTGCCAC 61.535 60.000 0.00 0.00 0.00 5.01
4868 5457 0.540365 CACCCCTCATTGTTGCCACT 60.540 55.000 0.00 0.00 0.00 4.00
4869 5458 1.072266 ACCCCTCATTGTTGCCACTA 58.928 50.000 0.00 0.00 0.00 2.74
4870 5459 1.271926 ACCCCTCATTGTTGCCACTAC 60.272 52.381 0.00 0.00 0.00 2.73
4871 5460 1.004745 CCCCTCATTGTTGCCACTACT 59.995 52.381 0.00 0.00 0.00 2.57
4872 5461 2.238646 CCCCTCATTGTTGCCACTACTA 59.761 50.000 0.00 0.00 0.00 1.82
4873 5462 3.308117 CCCCTCATTGTTGCCACTACTAA 60.308 47.826 0.00 0.00 0.00 2.24
4875 5464 4.323417 CCTCATTGTTGCCACTACTAACA 58.677 43.478 0.00 0.00 32.93 2.41
4878 5467 6.597672 CCTCATTGTTGCCACTACTAACATAA 59.402 38.462 0.00 0.00 34.63 1.90
4879 5468 7.372451 TCATTGTTGCCACTACTAACATAAC 57.628 36.000 0.00 0.00 34.63 1.89
4882 5471 4.687018 TGTTGCCACTACTAACATAACACG 59.313 41.667 0.00 0.00 30.06 4.49
4883 5472 3.852286 TGCCACTACTAACATAACACGG 58.148 45.455 0.00 0.00 0.00 4.94
4885 5474 3.677976 GCCACTACTAACATAACACGGCT 60.678 47.826 0.00 0.00 33.03 5.52
4886 5475 4.110482 CCACTACTAACATAACACGGCTC 58.890 47.826 0.00 0.00 0.00 4.70
4887 5476 4.142227 CCACTACTAACATAACACGGCTCT 60.142 45.833 0.00 0.00 0.00 4.09
4888 5477 5.408356 CACTACTAACATAACACGGCTCTT 58.592 41.667 0.00 0.00 0.00 2.85
4889 5478 5.288712 CACTACTAACATAACACGGCTCTTG 59.711 44.000 0.00 0.00 0.00 3.02
4890 5479 3.000727 ACTAACATAACACGGCTCTTGC 58.999 45.455 0.00 0.00 38.76 4.01
4906 5495 2.280457 GCCTAGAGCACCGGCATC 60.280 66.667 0.00 0.00 44.61 3.91
4907 5496 3.094062 GCCTAGAGCACCGGCATCA 62.094 63.158 0.00 0.00 44.61 3.07
4908 5497 1.227380 CCTAGAGCACCGGCATCAC 60.227 63.158 0.00 0.00 44.61 3.06
4909 5498 1.680522 CCTAGAGCACCGGCATCACT 61.681 60.000 0.00 0.00 44.61 3.41
4910 5499 0.529337 CTAGAGCACCGGCATCACTG 60.529 60.000 0.00 0.00 44.61 3.66
4911 5500 1.257750 TAGAGCACCGGCATCACTGT 61.258 55.000 0.00 0.00 44.61 3.55
4912 5501 1.672356 GAGCACCGGCATCACTGTT 60.672 57.895 0.00 0.00 44.61 3.16
4913 5502 1.639298 GAGCACCGGCATCACTGTTC 61.639 60.000 0.00 0.00 44.61 3.18
4914 5503 2.690778 GCACCGGCATCACTGTTCC 61.691 63.158 0.00 0.00 40.72 3.62
4921 5510 0.244721 GCATCACTGTTCCCCTTTGC 59.755 55.000 0.00 0.00 0.00 3.68
5034 5623 5.106317 ACACACAATCCCTTGTTAATTAGCG 60.106 40.000 0.00 0.00 43.05 4.26
5042 5631 4.394920 CCCTTGTTAATTAGCGTCACATGT 59.605 41.667 0.00 0.00 0.00 3.21
5047 5636 1.656652 ATTAGCGTCACATGTCCTGC 58.343 50.000 0.00 0.00 0.00 4.85
5048 5637 0.391130 TTAGCGTCACATGTCCTGCC 60.391 55.000 0.00 0.00 0.00 4.85
5049 5638 1.257750 TAGCGTCACATGTCCTGCCT 61.258 55.000 0.00 0.00 0.00 4.75
5050 5639 2.393768 GCGTCACATGTCCTGCCTG 61.394 63.158 0.00 0.00 0.00 4.85
5051 5640 1.004560 CGTCACATGTCCTGCCTGT 60.005 57.895 0.00 0.00 0.00 4.00
5052 5641 1.293963 CGTCACATGTCCTGCCTGTG 61.294 60.000 0.00 0.00 42.59 3.66
5053 5642 0.957395 GTCACATGTCCTGCCTGTGG 60.957 60.000 0.00 0.00 41.87 4.17
5093 5682 2.692041 CCATCTGCTCCCCTCATTTTTC 59.308 50.000 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 50 9.774742 GTCTTTATGTGACTTGTATTTTGATCC 57.225 33.333 0.00 0.00 0.00 3.36
64 69 7.972832 TCAGTTTTGTTATGTCGGTCTTTAT 57.027 32.000 0.00 0.00 0.00 1.40
68 73 6.540914 TCTTTTCAGTTTTGTTATGTCGGTCT 59.459 34.615 0.00 0.00 0.00 3.85
92 97 6.365789 GTCAAGCTCAGAGATGTTATGCTATC 59.634 42.308 0.00 0.00 0.00 2.08
99 104 3.578282 TGGTGTCAAGCTCAGAGATGTTA 59.422 43.478 0.00 0.00 0.00 2.41
112 117 2.590575 ACGGGCGTTGGTGTCAAG 60.591 61.111 0.00 0.00 32.92 3.02
119 124 4.619227 ACAGGTGACGGGCGTTGG 62.619 66.667 0.00 0.00 0.00 3.77
134 139 1.766059 AGTGGTGGTGCTGGAGACA 60.766 57.895 0.00 0.00 39.59 3.41
149 154 1.002468 CTTTCTTCGGTGGTTGCAGTG 60.002 52.381 0.00 0.00 0.00 3.66
152 157 2.045561 TTCTTTCTTCGGTGGTTGCA 57.954 45.000 0.00 0.00 0.00 4.08
156 161 2.413837 CGTCATTCTTTCTTCGGTGGT 58.586 47.619 0.00 0.00 0.00 4.16
157 162 1.732259 CCGTCATTCTTTCTTCGGTGG 59.268 52.381 0.00 0.00 34.38 4.61
159 164 3.056107 TGATCCGTCATTCTTTCTTCGGT 60.056 43.478 0.00 0.00 39.14 4.69
195 201 2.501128 CGATGGAGCCGTGTGGAT 59.499 61.111 0.00 0.00 37.49 3.41
196 202 4.451150 GCGATGGAGCCGTGTGGA 62.451 66.667 0.00 0.00 37.49 4.02
197 203 4.457496 AGCGATGGAGCCGTGTGG 62.457 66.667 0.00 0.00 38.01 4.17
199 205 1.391933 TATCAGCGATGGAGCCGTGT 61.392 55.000 0.00 0.00 38.01 4.49
200 206 0.037882 ATATCAGCGATGGAGCCGTG 60.038 55.000 0.00 0.00 38.01 4.94
201 207 0.037882 CATATCAGCGATGGAGCCGT 60.038 55.000 0.00 0.00 38.01 5.68
250 257 1.286880 CGGCAAGGGCTTCACTTTG 59.713 57.895 0.00 0.00 40.87 2.77
295 303 1.669760 GTTTGATGGCGTGTCCGGA 60.670 57.895 0.00 0.00 37.80 5.14
300 308 2.254546 TCTGAAGTTTGATGGCGTGT 57.745 45.000 0.00 0.00 0.00 4.49
305 313 4.394300 GGTGTCAGATCTGAAGTTTGATGG 59.606 45.833 26.70 0.00 41.85 3.51
308 316 3.244561 GGGGTGTCAGATCTGAAGTTTGA 60.245 47.826 26.70 0.27 41.85 2.69
310 318 2.711009 TGGGGTGTCAGATCTGAAGTTT 59.289 45.455 26.70 0.00 41.85 2.66
315 323 0.178906 TGGTGGGGTGTCAGATCTGA 60.179 55.000 21.67 21.67 37.24 3.27
324 332 1.628846 GTCTTAGTCATGGTGGGGTGT 59.371 52.381 0.00 0.00 0.00 4.16
330 338 0.172578 TCGGCGTCTTAGTCATGGTG 59.827 55.000 6.85 0.00 0.00 4.17
335 343 0.809385 CCTCTTCGGCGTCTTAGTCA 59.191 55.000 6.85 0.00 0.00 3.41
377 385 3.642503 TGTGCGGGATTCGGGGTT 61.643 61.111 0.00 0.00 39.69 4.11
381 389 2.736682 GAACGTGTGCGGGATTCGG 61.737 63.158 0.00 0.00 43.45 4.30
403 411 2.682836 TGCATCGACGACATCTGAAAA 58.317 42.857 0.00 0.00 0.00 2.29
406 414 1.992667 GTTTGCATCGACGACATCTGA 59.007 47.619 0.00 0.00 0.00 3.27
412 420 0.584396 TTGTGGTTTGCATCGACGAC 59.416 50.000 0.00 0.00 0.00 4.34
424 432 0.322816 AGCGGATGCAGATTGTGGTT 60.323 50.000 0.00 0.00 46.23 3.67
427 435 0.463295 AGGAGCGGATGCAGATTGTG 60.463 55.000 0.00 0.00 46.23 3.33
465 473 7.662897 TCACCCGCAAAAGAAATAAAAAGTAT 58.337 30.769 0.00 0.00 0.00 2.12
470 478 5.776173 TCTCACCCGCAAAAGAAATAAAA 57.224 34.783 0.00 0.00 0.00 1.52
546 554 9.150348 CCAAAATCTCACACTAAAACAAAAACT 57.850 29.630 0.00 0.00 0.00 2.66
578 586 2.239907 GAGGGAGGGTGGCATATATTCC 59.760 54.545 0.00 0.00 0.00 3.01
592 600 5.462398 CGAAAATTAACGTATGAGAGGGAGG 59.538 44.000 0.00 0.00 0.00 4.30
599 611 5.353938 TCCCCTCGAAAATTAACGTATGAG 58.646 41.667 0.00 0.00 0.00 2.90
602 614 7.227314 GGTTTATCCCCTCGAAAATTAACGTAT 59.773 37.037 0.00 0.00 0.00 3.06
603 615 6.538381 GGTTTATCCCCTCGAAAATTAACGTA 59.462 38.462 0.00 0.00 0.00 3.57
616 628 0.623723 TGCCACTGGTTTATCCCCTC 59.376 55.000 0.00 0.00 34.77 4.30
617 629 0.331616 GTGCCACTGGTTTATCCCCT 59.668 55.000 0.00 0.00 34.77 4.79
618 630 0.039035 TGTGCCACTGGTTTATCCCC 59.961 55.000 0.00 0.00 34.77 4.81
632 644 6.649557 ACTGTACAAGAATAGTTTACTGTGCC 59.350 38.462 0.00 0.00 0.00 5.01
684 728 7.809331 CGTACCTTTGTGTACTTTCTATGTACA 59.191 37.037 0.00 0.00 45.21 2.90
714 758 0.668401 GCGCTACGGTTACCAAGTGT 60.668 55.000 13.49 1.44 0.00 3.55
755 799 5.190132 TCTCTTCCAGCAGAGTACTACTAGT 59.810 44.000 0.00 0.00 41.18 2.57
756 800 5.676552 TCTCTTCCAGCAGAGTACTACTAG 58.323 45.833 0.00 0.00 41.18 2.57
757 801 5.695424 TCTCTTCCAGCAGAGTACTACTA 57.305 43.478 0.00 0.00 41.18 1.82
758 802 4.577988 TCTCTTCCAGCAGAGTACTACT 57.422 45.455 0.00 0.00 41.18 2.57
759 803 5.646577 TTTCTCTTCCAGCAGAGTACTAC 57.353 43.478 0.00 0.00 41.18 2.73
760 804 6.665992 TTTTTCTCTTCCAGCAGAGTACTA 57.334 37.500 0.00 0.00 41.18 1.82
761 805 5.552870 TTTTTCTCTTCCAGCAGAGTACT 57.447 39.130 0.00 0.00 41.18 2.73
762 806 7.907214 TTATTTTTCTCTTCCAGCAGAGTAC 57.093 36.000 0.00 0.00 41.18 2.73
787 831 5.889289 CGGAGGGAGGAACCAATTTTAATTA 59.111 40.000 0.00 0.00 41.20 1.40
789 833 4.264217 ACGGAGGGAGGAACCAATTTTAAT 60.264 41.667 0.00 0.00 41.20 1.40
790 834 3.074836 ACGGAGGGAGGAACCAATTTTAA 59.925 43.478 0.00 0.00 41.20 1.52
791 835 2.645797 ACGGAGGGAGGAACCAATTTTA 59.354 45.455 0.00 0.00 41.20 1.52
796 840 1.916777 GGACGGAGGGAGGAACCAA 60.917 63.158 0.00 0.00 41.20 3.67
921 968 1.689233 TGGTTGGGGGATCGGAGAG 60.689 63.158 0.00 0.00 43.63 3.20
971 1307 4.179599 GGGAGGAGGAGGAGGGGG 62.180 77.778 0.00 0.00 0.00 5.40
972 1308 4.179599 GGGGAGGAGGAGGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
973 1309 4.179599 GGGGGAGGAGGAGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
1683 2039 1.800286 GCTTTCAATCCCAATCGCAGC 60.800 52.381 0.00 0.00 0.00 5.25
1694 2051 1.831580 ACCTCCAGCAGCTTTCAATC 58.168 50.000 0.00 0.00 0.00 2.67
1707 2064 2.297033 GCTGCAAAGATTCAAACCTCCA 59.703 45.455 0.00 0.00 0.00 3.86
1713 2070 3.058016 CGAGAAGGCTGCAAAGATTCAAA 60.058 43.478 0.50 0.00 0.00 2.69
1744 2101 3.984200 AACTAGAGAACCGCGCGGC 62.984 63.158 46.22 31.65 39.32 6.53
1745 2102 1.872679 GAACTAGAGAACCGCGCGG 60.873 63.158 44.88 44.88 42.03 6.46
1750 2133 3.181499 ACGTGCATAGAACTAGAGAACCG 60.181 47.826 0.00 0.00 0.00 4.44
1754 2137 3.128764 CCACACGTGCATAGAACTAGAGA 59.871 47.826 17.22 0.00 0.00 3.10
1801 2185 4.866486 GGGAAATCTAGCAGCAAAACATTG 59.134 41.667 0.00 0.00 0.00 2.82
1802 2186 4.081476 GGGGAAATCTAGCAGCAAAACATT 60.081 41.667 0.00 0.00 0.00 2.71
1839 2230 1.379843 ATTCATGGGGCCGTCAACC 60.380 57.895 0.00 0.00 0.00 3.77
1897 2291 4.715520 CGCAAGCATCATTAGTACGAAT 57.284 40.909 0.00 0.00 0.00 3.34
2035 2433 9.729281 CCCATTAAAAGTTTCAGGTAGTACTAA 57.271 33.333 3.61 0.00 0.00 2.24
2036 2434 8.883302 ACCCATTAAAAGTTTCAGGTAGTACTA 58.117 33.333 0.00 0.00 0.00 1.82
2037 2435 7.752638 ACCCATTAAAAGTTTCAGGTAGTACT 58.247 34.615 0.00 0.00 0.00 2.73
2044 2442 5.304357 ACAAGGACCCATTAAAAGTTTCAGG 59.696 40.000 0.00 0.00 0.00 3.86
2066 2464 2.972713 AGACAGAGGGAGTTTGCTAACA 59.027 45.455 13.46 0.00 36.70 2.41
2073 2471 6.380560 GGTAGTATTACAGACAGAGGGAGTTT 59.619 42.308 0.00 0.00 0.00 2.66
2081 2479 5.108187 ACGGAGGTAGTATTACAGACAGA 57.892 43.478 0.00 0.00 0.00 3.41
2084 2482 6.127786 ACTGAAACGGAGGTAGTATTACAGAC 60.128 42.308 0.00 0.00 0.00 3.51
2094 2492 6.755607 GGACTTATAAACTGAAACGGAGGTAG 59.244 42.308 0.00 0.00 0.00 3.18
2095 2493 6.438425 AGGACTTATAAACTGAAACGGAGGTA 59.562 38.462 0.00 0.00 0.00 3.08
2096 2494 5.247792 AGGACTTATAAACTGAAACGGAGGT 59.752 40.000 0.00 0.00 0.00 3.85
2098 2496 6.471519 CGTAGGACTTATAAACTGAAACGGAG 59.528 42.308 0.00 0.00 0.00 4.63
2099 2497 6.324819 CGTAGGACTTATAAACTGAAACGGA 58.675 40.000 0.00 0.00 0.00 4.69
2100 2498 5.005107 GCGTAGGACTTATAAACTGAAACGG 59.995 44.000 0.00 0.00 0.00 4.44
2102 2500 5.574443 ACGCGTAGGACTTATAAACTGAAAC 59.426 40.000 11.67 0.00 0.00 2.78
2103 2501 5.713025 ACGCGTAGGACTTATAAACTGAAA 58.287 37.500 11.67 0.00 0.00 2.69
2104 2502 5.314923 ACGCGTAGGACTTATAAACTGAA 57.685 39.130 11.67 0.00 0.00 3.02
2105 2503 4.970662 ACGCGTAGGACTTATAAACTGA 57.029 40.909 11.67 0.00 0.00 3.41
2106 2504 6.798959 GGTATACGCGTAGGACTTATAAACTG 59.201 42.308 24.78 0.00 0.00 3.16
2107 2505 6.712547 AGGTATACGCGTAGGACTTATAAACT 59.287 38.462 24.78 11.68 0.00 2.66
2108 2506 6.903419 AGGTATACGCGTAGGACTTATAAAC 58.097 40.000 24.78 9.83 0.00 2.01
2111 2509 6.070767 ACCTAGGTATACGCGTAGGACTTATA 60.071 42.308 25.95 16.75 45.08 0.98
2112 2510 5.181748 CCTAGGTATACGCGTAGGACTTAT 58.818 45.833 24.78 9.37 45.08 1.73
2114 2512 3.181450 ACCTAGGTATACGCGTAGGACTT 60.181 47.826 25.95 21.88 45.08 3.01
2115 2513 2.370189 ACCTAGGTATACGCGTAGGACT 59.630 50.000 25.95 22.11 45.08 3.85
2116 2514 2.772287 ACCTAGGTATACGCGTAGGAC 58.228 52.381 25.95 22.99 45.08 3.85
2119 2517 2.351157 GGCAACCTAGGTATACGCGTAG 60.351 54.545 24.78 11.28 0.00 3.51
2120 2518 1.608590 GGCAACCTAGGTATACGCGTA 59.391 52.381 22.94 22.94 0.00 4.42
2121 2519 0.386838 GGCAACCTAGGTATACGCGT 59.613 55.000 19.17 19.17 0.00 6.01
2122 2520 0.386476 TGGCAACCTAGGTATACGCG 59.614 55.000 16.67 3.53 0.00 6.01
2124 2522 7.442969 TGATAAAATTGGCAACCTAGGTATACG 59.557 37.037 16.67 5.52 0.00 3.06
2125 2523 8.565416 GTGATAAAATTGGCAACCTAGGTATAC 58.435 37.037 16.67 8.74 0.00 1.47
2127 2525 6.549736 GGTGATAAAATTGGCAACCTAGGTAT 59.450 38.462 16.67 0.83 0.00 2.73
2129 2527 4.709886 GGTGATAAAATTGGCAACCTAGGT 59.290 41.667 9.21 9.21 0.00 3.08
2130 2528 4.956075 AGGTGATAAAATTGGCAACCTAGG 59.044 41.667 7.41 7.41 0.00 3.02
2131 2529 6.530019 AAGGTGATAAAATTGGCAACCTAG 57.470 37.500 0.00 0.00 0.00 3.02
2132 2530 8.602472 ATTAAGGTGATAAAATTGGCAACCTA 57.398 30.769 0.00 0.00 0.00 3.08
2133 2531 6.926630 TTAAGGTGATAAAATTGGCAACCT 57.073 33.333 0.00 0.00 0.00 3.50
2179 2577 8.826710 CAGATGCTCTATTTTCAAACCGTATAA 58.173 33.333 0.00 0.00 0.00 0.98
2181 2579 7.047891 TCAGATGCTCTATTTTCAAACCGTAT 58.952 34.615 0.00 0.00 0.00 3.06
2182 2580 6.403049 TCAGATGCTCTATTTTCAAACCGTA 58.597 36.000 0.00 0.00 0.00 4.02
2183 2581 5.245531 TCAGATGCTCTATTTTCAAACCGT 58.754 37.500 0.00 0.00 0.00 4.83
2184 2582 5.801350 TCAGATGCTCTATTTTCAAACCG 57.199 39.130 0.00 0.00 0.00 4.44
2185 2583 7.150783 ACTTCAGATGCTCTATTTTCAAACC 57.849 36.000 0.00 0.00 0.00 3.27
2239 2637 9.887406 CGTTAATTTGACCAACTTAATACAAGT 57.113 29.630 8.02 0.00 31.31 3.16
2241 2639 9.881529 GTCGTTAATTTGACCAACTTAATACAA 57.118 29.630 8.02 0.00 31.31 2.41
2254 2652 2.941064 GCCCCTAGGTCGTTAATTTGAC 59.059 50.000 8.29 0.00 34.57 3.18
2255 2653 2.572556 TGCCCCTAGGTCGTTAATTTGA 59.427 45.455 8.29 0.00 34.57 2.69
2256 2654 2.681344 GTGCCCCTAGGTCGTTAATTTG 59.319 50.000 8.29 0.00 34.57 2.32
2257 2655 2.678769 CGTGCCCCTAGGTCGTTAATTT 60.679 50.000 8.29 0.00 34.57 1.82
2258 2656 1.134610 CGTGCCCCTAGGTCGTTAATT 60.135 52.381 8.29 0.00 34.57 1.40
2259 2657 0.462789 CGTGCCCCTAGGTCGTTAAT 59.537 55.000 8.29 0.00 34.57 1.40
2260 2658 1.892338 CGTGCCCCTAGGTCGTTAA 59.108 57.895 8.29 0.00 34.57 2.01
2261 2659 2.713967 GCGTGCCCCTAGGTCGTTA 61.714 63.158 8.29 0.00 35.88 3.18
2262 2660 4.078516 GCGTGCCCCTAGGTCGTT 62.079 66.667 8.29 0.00 35.88 3.85
2276 2674 4.973055 TTTACAGGGCGTGCGCGT 62.973 61.111 22.18 2.94 43.06 6.01
2277 2675 4.439472 GTTTACAGGGCGTGCGCG 62.439 66.667 16.86 16.86 43.06 6.86
2278 2676 3.047877 AGTTTACAGGGCGTGCGC 61.048 61.111 7.17 8.17 41.06 6.09
2279 2677 1.626654 CTCAGTTTACAGGGCGTGCG 61.627 60.000 7.17 0.00 0.00 5.34
2280 2678 0.320421 TCTCAGTTTACAGGGCGTGC 60.320 55.000 7.17 0.00 0.00 5.34
2281 2679 1.272490 TCTCTCAGTTTACAGGGCGTG 59.728 52.381 5.50 5.50 0.00 5.34
2282 2680 1.546476 CTCTCTCAGTTTACAGGGCGT 59.454 52.381 0.00 0.00 0.00 5.68
2283 2681 1.819288 TCTCTCTCAGTTTACAGGGCG 59.181 52.381 0.00 0.00 0.00 6.13
2284 2682 2.167487 CCTCTCTCTCAGTTTACAGGGC 59.833 54.545 0.00 0.00 0.00 5.19
2285 2683 3.436243 ACCTCTCTCTCAGTTTACAGGG 58.564 50.000 0.00 0.00 0.00 4.45
2286 2684 5.258051 ACTACCTCTCTCTCAGTTTACAGG 58.742 45.833 0.00 0.00 0.00 4.00
2287 2685 7.279313 GTCTACTACCTCTCTCTCAGTTTACAG 59.721 44.444 0.00 0.00 0.00 2.74
2288 2686 7.104939 GTCTACTACCTCTCTCTCAGTTTACA 58.895 42.308 0.00 0.00 0.00 2.41
2289 2687 7.104939 TGTCTACTACCTCTCTCTCAGTTTAC 58.895 42.308 0.00 0.00 0.00 2.01
2290 2688 7.255199 TGTCTACTACCTCTCTCTCAGTTTA 57.745 40.000 0.00 0.00 0.00 2.01
2291 2689 6.129414 TGTCTACTACCTCTCTCTCAGTTT 57.871 41.667 0.00 0.00 0.00 2.66
2292 2690 5.765576 TGTCTACTACCTCTCTCTCAGTT 57.234 43.478 0.00 0.00 0.00 3.16
2293 2691 5.765576 TTGTCTACTACCTCTCTCTCAGT 57.234 43.478 0.00 0.00 0.00 3.41
2294 2692 7.416213 CCAAATTGTCTACTACCTCTCTCTCAG 60.416 44.444 0.00 0.00 0.00 3.35
2295 2693 6.378564 CCAAATTGTCTACTACCTCTCTCTCA 59.621 42.308 0.00 0.00 0.00 3.27
2296 2694 6.378848 ACCAAATTGTCTACTACCTCTCTCTC 59.621 42.308 0.00 0.00 0.00 3.20
2297 2695 6.257586 ACCAAATTGTCTACTACCTCTCTCT 58.742 40.000 0.00 0.00 0.00 3.10
2298 2696 6.532988 ACCAAATTGTCTACTACCTCTCTC 57.467 41.667 0.00 0.00 0.00 3.20
2299 2697 7.183460 ACTACCAAATTGTCTACTACCTCTCT 58.817 38.462 0.00 0.00 0.00 3.10
2300 2698 7.407393 ACTACCAAATTGTCTACTACCTCTC 57.593 40.000 0.00 0.00 0.00 3.20
2301 2699 9.490083 AATACTACCAAATTGTCTACTACCTCT 57.510 33.333 0.00 0.00 0.00 3.69
2302 2700 9.747293 GAATACTACCAAATTGTCTACTACCTC 57.253 37.037 0.00 0.00 0.00 3.85
2303 2701 8.702819 GGAATACTACCAAATTGTCTACTACCT 58.297 37.037 0.00 0.00 0.00 3.08
2304 2702 7.650903 CGGAATACTACCAAATTGTCTACTACC 59.349 40.741 0.00 0.00 0.00 3.18
2308 2706 7.675637 GCAACGGAATACTACCAAATTGTCTAC 60.676 40.741 0.00 0.00 0.00 2.59
2312 2710 4.762765 TGCAACGGAATACTACCAAATTGT 59.237 37.500 0.00 0.00 0.00 2.71
2320 2718 4.658071 CCACAAATGCAACGGAATACTAC 58.342 43.478 0.00 0.00 0.00 2.73
2321 2719 3.127895 GCCACAAATGCAACGGAATACTA 59.872 43.478 0.00 0.00 0.00 1.82
2322 2720 2.094752 GCCACAAATGCAACGGAATACT 60.095 45.455 0.00 0.00 0.00 2.12
2350 2748 3.782656 TTGGAAGGAGGGAGTACAAAC 57.217 47.619 0.00 0.00 0.00 2.93
2351 2749 6.011981 ACATATTTGGAAGGAGGGAGTACAAA 60.012 38.462 0.00 0.00 0.00 2.83
2378 2776 4.743057 AGGCTAAAAATTTGATGGGCTC 57.257 40.909 9.74 0.00 0.00 4.70
2561 2964 5.300286 CCCTCTTTCCAAATATGTAAGGCAG 59.700 44.000 0.00 0.00 0.00 4.85
2609 3012 1.376942 CCAAGTCTGGGAGCTGCTG 60.377 63.158 7.01 0.00 39.30 4.41
2614 3017 1.079750 GACGTCCAAGTCTGGGAGC 60.080 63.158 3.51 0.00 43.71 4.70
2666 3069 5.497474 TCCACTCCTTTATAAACTGAAGCC 58.503 41.667 0.00 0.00 0.00 4.35
2706 3110 9.302345 CACAAGTATTAAGTACATCAGTCGATT 57.698 33.333 0.00 0.00 35.67 3.34
2935 3342 1.373748 GCTGCTCCACCGAAACGTA 60.374 57.895 0.00 0.00 0.00 3.57
3075 3482 3.880490 CAGAGAGGCAGACTATAGACGTT 59.120 47.826 6.78 0.00 0.00 3.99
3269 3676 8.090788 AGTAACATGAATTAGACTACCATGGT 57.909 34.615 23.55 23.55 38.98 3.55
3285 3692 9.376075 TGCAAATGAAAAGAAAAAGTAACATGA 57.624 25.926 0.00 0.00 0.00 3.07
3297 3704 6.826893 GCAGTTTAGTGCAAATGAAAAGAA 57.173 33.333 4.72 0.00 43.41 2.52
3345 3802 0.816825 CCTGAGGCATTCATCACCCG 60.817 60.000 0.00 0.00 34.68 5.28
3640 4097 0.525668 AGTTCTTCACTATCGCGCCG 60.526 55.000 0.00 0.00 31.97 6.46
3844 4301 2.769209 AGCAGTCCCCTATCACTGAAT 58.231 47.619 3.24 0.00 42.37 2.57
3853 4310 1.145571 AACCACAAAGCAGTCCCCTA 58.854 50.000 0.00 0.00 0.00 3.53
3860 4317 6.458210 AGAAATAATCCAAACCACAAAGCAG 58.542 36.000 0.00 0.00 0.00 4.24
3872 4329 8.877864 AACCTCATGTTGTAGAAATAATCCAA 57.122 30.769 0.00 0.00 35.31 3.53
4018 4475 5.352016 GCGGTACAGGTACAATTTATCAACA 59.648 40.000 11.35 0.00 37.78 3.33
4027 4484 2.176889 AGTGAGCGGTACAGGTACAAT 58.823 47.619 11.35 0.00 37.78 2.71
4042 4499 1.222936 CCTTGGCCCTGCTAGTGAG 59.777 63.158 0.00 0.00 0.00 3.51
4069 4526 3.137533 CAAAATTTTCACCAATGGCGGT 58.862 40.909 0.00 0.00 41.07 5.68
4098 4555 3.005367 ACCAAACTCCCACAAAATAAGCG 59.995 43.478 0.00 0.00 0.00 4.68
4161 4618 6.409704 TCAGGAATAACAGAACAAGGATGAG 58.590 40.000 0.00 0.00 0.00 2.90
4186 4643 0.104304 ACAAAACGACCAGCTCTCGT 59.896 50.000 9.68 9.68 46.20 4.18
4200 4657 7.973388 CCAGTTAACTTGATCAAGAACACAAAA 59.027 33.333 36.15 17.64 40.79 2.44
4227 4687 0.250338 GAAACTTCCGTCCACTGGCT 60.250 55.000 0.00 0.00 0.00 4.75
4276 4736 5.965334 GTCCAGTGAATAATACATTGTTGCG 59.035 40.000 0.00 0.00 0.00 4.85
4277 4737 6.265577 GGTCCAGTGAATAATACATTGTTGC 58.734 40.000 0.00 0.00 0.00 4.17
4281 4742 6.017934 CCTTCGGTCCAGTGAATAATACATTG 60.018 42.308 0.00 0.00 0.00 2.82
4282 4743 6.055588 CCTTCGGTCCAGTGAATAATACATT 58.944 40.000 0.00 0.00 0.00 2.71
4287 4748 3.432326 GCTCCTTCGGTCCAGTGAATAAT 60.432 47.826 0.00 0.00 0.00 1.28
4289 4750 1.480954 GCTCCTTCGGTCCAGTGAATA 59.519 52.381 0.00 0.00 0.00 1.75
4295 4756 2.266055 GGTGCTCCTTCGGTCCAG 59.734 66.667 0.00 0.00 0.00 3.86
4301 4762 2.436646 AATGCCGGTGCTCCTTCG 60.437 61.111 1.90 0.00 38.71 3.79
4327 4788 3.296628 ACAATTGTGAATTCGTTGCGAC 58.703 40.909 11.07 0.00 34.89 5.19
4330 4791 4.975502 TGAGAACAATTGTGAATTCGTTGC 59.024 37.500 12.82 0.18 0.00 4.17
4332 4793 6.969366 TCATGAGAACAATTGTGAATTCGTT 58.031 32.000 12.82 0.00 0.00 3.85
4333 4794 6.558771 TCATGAGAACAATTGTGAATTCGT 57.441 33.333 12.82 6.35 0.00 3.85
4334 4795 7.245604 TCATCATGAGAACAATTGTGAATTCG 58.754 34.615 12.82 0.51 0.00 3.34
4352 4818 0.596600 GCAAATGCCGCCTCATCATG 60.597 55.000 0.00 0.00 34.31 3.07
4390 4856 7.070447 ATCAAGATGATACACATGTAGTGAGGT 59.930 37.037 0.00 0.00 42.26 3.85
4392 4858 8.139989 TGATCAAGATGATACACATGTAGTGAG 58.860 37.037 0.00 0.00 43.33 3.51
4394 4860 7.095732 GCTGATCAAGATGATACACATGTAGTG 60.096 40.741 0.00 0.00 44.87 2.74
4395 4861 6.927936 GCTGATCAAGATGATACACATGTAGT 59.072 38.462 0.00 1.92 37.20 2.73
4396 4862 6.927381 TGCTGATCAAGATGATACACATGTAG 59.073 38.462 0.00 0.00 37.20 2.74
4397 4863 6.819284 TGCTGATCAAGATGATACACATGTA 58.181 36.000 0.00 0.00 37.20 2.29
4398 4864 5.677567 TGCTGATCAAGATGATACACATGT 58.322 37.500 0.00 0.00 37.20 3.21
4399 4865 6.651225 AGATGCTGATCAAGATGATACACATG 59.349 38.462 0.00 0.00 37.20 3.21
4402 4868 5.107026 GCAGATGCTGATCAAGATGATACAC 60.107 44.000 0.00 0.00 36.17 2.90
4431 4897 0.250295 TTGTCTTCAACTGCTCCCGG 60.250 55.000 0.00 0.00 0.00 5.73
4432 4898 1.151668 CTTGTCTTCAACTGCTCCCG 58.848 55.000 0.00 0.00 0.00 5.14
4437 4904 3.149196 TGATTCCCTTGTCTTCAACTGC 58.851 45.455 0.00 0.00 0.00 4.40
4467 4934 1.516365 ATACTGGGATCGACGCGAGG 61.516 60.000 15.93 3.48 39.91 4.63
4473 4940 1.221414 GCTGCAATACTGGGATCGAC 58.779 55.000 0.00 0.00 0.00 4.20
4474 4941 0.829990 TGCTGCAATACTGGGATCGA 59.170 50.000 0.00 0.00 0.00 3.59
4476 4943 1.945394 CTGTGCTGCAATACTGGGATC 59.055 52.381 2.77 0.00 0.00 3.36
4477 4944 1.561076 TCTGTGCTGCAATACTGGGAT 59.439 47.619 2.77 0.00 0.00 3.85
4479 4946 1.674441 CATCTGTGCTGCAATACTGGG 59.326 52.381 2.77 0.00 0.00 4.45
4481 4948 2.031807 GCTCATCTGTGCTGCAATACTG 59.968 50.000 2.77 0.38 0.00 2.74
4482 4949 2.286872 GCTCATCTGTGCTGCAATACT 58.713 47.619 2.77 0.00 0.00 2.12
4483 4950 2.011947 TGCTCATCTGTGCTGCAATAC 58.988 47.619 2.77 0.00 33.78 1.89
4487 4958 1.376812 CCTGCTCATCTGTGCTGCA 60.377 57.895 0.00 0.00 35.73 4.41
4488 4959 2.113433 CCCTGCTCATCTGTGCTGC 61.113 63.158 5.90 0.00 35.73 5.25
4489 4960 1.451567 CCCCTGCTCATCTGTGCTG 60.452 63.158 5.90 5.26 35.73 4.41
4502 4973 0.609957 TTGAGTGCAATCAGCCCCTG 60.610 55.000 17.22 0.00 44.83 4.45
4511 4982 3.498774 AACTGGACTCTTGAGTGCAAT 57.501 42.857 21.70 12.41 39.54 3.56
4513 4984 2.289072 GCTAACTGGACTCTTGAGTGCA 60.289 50.000 20.56 20.56 37.80 4.57
4521 4992 1.203523 CAGAAGCGCTAACTGGACTCT 59.796 52.381 26.45 15.18 0.00 3.24
4535 5006 3.376546 GTCTGGATGGATGAAACAGAAGC 59.623 47.826 0.00 0.00 39.60 3.86
4536 5007 4.582869 TGTCTGGATGGATGAAACAGAAG 58.417 43.478 0.00 0.00 39.60 2.85
4537 5008 4.286808 TCTGTCTGGATGGATGAAACAGAA 59.713 41.667 0.00 0.00 38.82 3.02
4539 5010 4.190001 CTCTGTCTGGATGGATGAAACAG 58.810 47.826 0.00 0.00 35.20 3.16
4541 5012 3.198635 TCCTCTGTCTGGATGGATGAAAC 59.801 47.826 0.00 0.00 0.00 2.78
4542 5013 3.453717 CTCCTCTGTCTGGATGGATGAAA 59.546 47.826 0.00 0.00 32.56 2.69
4543 5014 3.036819 CTCCTCTGTCTGGATGGATGAA 58.963 50.000 0.00 0.00 32.56 2.57
4544 5015 2.023598 ACTCCTCTGTCTGGATGGATGA 60.024 50.000 0.00 0.00 32.56 2.92
4545 5016 2.102757 CACTCCTCTGTCTGGATGGATG 59.897 54.545 0.00 0.00 32.56 3.51
4546 5017 2.396608 CACTCCTCTGTCTGGATGGAT 58.603 52.381 0.00 0.00 32.56 3.41
4547 5018 1.620798 CCACTCCTCTGTCTGGATGGA 60.621 57.143 0.00 0.00 35.86 3.41
4548 5019 0.829333 CCACTCCTCTGTCTGGATGG 59.171 60.000 0.00 0.00 32.56 3.51
4549 5020 0.829333 CCCACTCCTCTGTCTGGATG 59.171 60.000 0.00 0.00 32.56 3.51
4550 5021 0.980231 GCCCACTCCTCTGTCTGGAT 60.980 60.000 0.00 0.00 32.56 3.41
4564 5105 0.538118 ATTCACATTGGCATGCCCAC 59.462 50.000 33.44 10.02 45.34 4.61
4566 5107 1.473788 GGAATTCACATTGGCATGCCC 60.474 52.381 33.44 16.23 33.05 5.36
4567 5108 1.207570 TGGAATTCACATTGGCATGCC 59.792 47.619 30.54 30.54 33.05 4.40
4568 5109 2.273557 GTGGAATTCACATTGGCATGC 58.726 47.619 9.90 9.90 45.39 4.06
4585 5127 1.487976 ACATGGATGGTAGCAGAGTGG 59.512 52.381 0.00 0.00 0.00 4.00
4587 5129 3.647636 AGTACATGGATGGTAGCAGAGT 58.352 45.455 0.00 0.00 0.00 3.24
4588 5130 4.141846 ACAAGTACATGGATGGTAGCAGAG 60.142 45.833 2.78 0.00 0.00 3.35
4592 5134 2.614057 GCACAAGTACATGGATGGTAGC 59.386 50.000 2.78 0.00 0.00 3.58
4595 5137 3.439857 AAGCACAAGTACATGGATGGT 57.560 42.857 2.78 0.00 0.00 3.55
4596 5138 4.769688 TCTAAGCACAAGTACATGGATGG 58.230 43.478 2.78 0.00 0.00 3.51
4601 5143 6.815641 AGTCATCTTCTAAGCACAAGTACATG 59.184 38.462 0.00 0.00 0.00 3.21
4603 5145 6.346477 AGTCATCTTCTAAGCACAAGTACA 57.654 37.500 0.00 0.00 0.00 2.90
4604 5146 7.436673 CCATAGTCATCTTCTAAGCACAAGTAC 59.563 40.741 0.00 0.00 0.00 2.73
4605 5147 7.124298 ACCATAGTCATCTTCTAAGCACAAGTA 59.876 37.037 0.00 0.00 0.00 2.24
4606 5148 6.070538 ACCATAGTCATCTTCTAAGCACAAGT 60.071 38.462 0.00 0.00 0.00 3.16
4607 5149 6.344500 ACCATAGTCATCTTCTAAGCACAAG 58.656 40.000 0.00 0.00 0.00 3.16
4608 5150 6.299805 ACCATAGTCATCTTCTAAGCACAA 57.700 37.500 0.00 0.00 0.00 3.33
4609 5151 5.939764 ACCATAGTCATCTTCTAAGCACA 57.060 39.130 0.00 0.00 0.00 4.57
4610 5152 8.718102 TTTTACCATAGTCATCTTCTAAGCAC 57.282 34.615 0.00 0.00 0.00 4.40
4611 5153 8.758829 TCTTTTACCATAGTCATCTTCTAAGCA 58.241 33.333 0.00 0.00 0.00 3.91
4615 5157 9.601217 GCTTTCTTTTACCATAGTCATCTTCTA 57.399 33.333 0.00 0.00 0.00 2.10
4616 5158 7.554476 GGCTTTCTTTTACCATAGTCATCTTCT 59.446 37.037 0.00 0.00 0.00 2.85
4618 5160 7.406104 AGGCTTTCTTTTACCATAGTCATCTT 58.594 34.615 0.00 0.00 0.00 2.40
4651 5206 4.001652 GAGGGAGGCTACAAAGTACAAAC 58.998 47.826 0.00 0.00 0.00 2.93
4652 5207 3.306502 CGAGGGAGGCTACAAAGTACAAA 60.307 47.826 0.00 0.00 0.00 2.83
4655 5210 2.097825 TCGAGGGAGGCTACAAAGTAC 58.902 52.381 0.00 0.00 0.00 2.73
4656 5211 2.025605 TCTCGAGGGAGGCTACAAAGTA 60.026 50.000 13.56 0.00 40.85 2.24
4657 5212 1.187087 CTCGAGGGAGGCTACAAAGT 58.813 55.000 3.91 0.00 36.61 2.66
4658 5213 1.135333 GTCTCGAGGGAGGCTACAAAG 59.865 57.143 13.56 0.00 41.77 2.77
4674 5234 6.791303 TGGTCTACAAAAACAACAATGTCTC 58.209 36.000 0.00 0.00 39.40 3.36
4726 5300 4.440112 GCATAATAAAGGCGAGGCAAAGTT 60.440 41.667 0.00 0.00 0.00 2.66
4727 5301 3.066760 GCATAATAAAGGCGAGGCAAAGT 59.933 43.478 0.00 0.00 0.00 2.66
4728 5302 3.316308 AGCATAATAAAGGCGAGGCAAAG 59.684 43.478 0.00 0.00 0.00 2.77
4729 5303 3.066621 CAGCATAATAAAGGCGAGGCAAA 59.933 43.478 0.00 0.00 0.00 3.68
4731 5305 2.158827 TCAGCATAATAAAGGCGAGGCA 60.159 45.455 0.00 0.00 0.00 4.75
4732 5306 2.481952 CTCAGCATAATAAAGGCGAGGC 59.518 50.000 0.00 0.00 0.00 4.70
4733 5307 3.995199 TCTCAGCATAATAAAGGCGAGG 58.005 45.455 0.00 0.00 32.80 4.63
4812 5386 3.912496 AGCAGCATGATAGTTGTGGTA 57.088 42.857 0.00 0.00 39.69 3.25
4813 5387 2.751259 CAAGCAGCATGATAGTTGTGGT 59.249 45.455 0.00 0.00 39.69 4.16
4814 5388 2.479049 GCAAGCAGCATGATAGTTGTGG 60.479 50.000 0.65 0.00 44.79 4.17
4828 5402 1.131883 GCTATGACAGTTGGCAAGCAG 59.868 52.381 0.00 0.00 36.16 4.24
4860 5449 4.092383 CCGTGTTATGTTAGTAGTGGCAAC 59.908 45.833 0.00 0.00 0.00 4.17
4862 5451 3.852286 CCGTGTTATGTTAGTAGTGGCA 58.148 45.455 0.00 0.00 0.00 4.92
4863 5452 2.606272 GCCGTGTTATGTTAGTAGTGGC 59.394 50.000 0.00 0.00 0.00 5.01
4864 5453 4.110482 GAGCCGTGTTATGTTAGTAGTGG 58.890 47.826 0.00 0.00 0.00 4.00
4865 5454 4.995124 AGAGCCGTGTTATGTTAGTAGTG 58.005 43.478 0.00 0.00 0.00 2.74
4866 5455 5.408356 CAAGAGCCGTGTTATGTTAGTAGT 58.592 41.667 0.00 0.00 0.00 2.73
4867 5456 4.267928 GCAAGAGCCGTGTTATGTTAGTAG 59.732 45.833 0.00 0.00 33.58 2.57
4868 5457 4.178540 GCAAGAGCCGTGTTATGTTAGTA 58.821 43.478 0.00 0.00 33.58 1.82
4869 5458 3.000727 GCAAGAGCCGTGTTATGTTAGT 58.999 45.455 0.00 0.00 33.58 2.24
4870 5459 3.658351 GCAAGAGCCGTGTTATGTTAG 57.342 47.619 0.00 0.00 33.58 2.34
4890 5479 1.227380 GTGATGCCGGTGCTCTAGG 60.227 63.158 1.90 0.00 38.71 3.02
4892 5481 1.257750 ACAGTGATGCCGGTGCTCTA 61.258 55.000 1.90 0.00 38.71 2.43
4893 5482 2.116983 AACAGTGATGCCGGTGCTCT 62.117 55.000 1.90 0.00 38.71 4.09
4894 5483 1.639298 GAACAGTGATGCCGGTGCTC 61.639 60.000 1.90 0.00 38.71 4.26
4895 5484 1.672356 GAACAGTGATGCCGGTGCT 60.672 57.895 1.90 0.00 38.71 4.40
4896 5485 2.690778 GGAACAGTGATGCCGGTGC 61.691 63.158 1.90 0.00 38.26 5.01
4897 5486 2.040544 GGGAACAGTGATGCCGGTG 61.041 63.158 1.90 0.00 0.00 4.94
4898 5487 2.351276 GGGAACAGTGATGCCGGT 59.649 61.111 1.90 0.00 0.00 5.28
4899 5488 2.438434 GGGGAACAGTGATGCCGG 60.438 66.667 4.85 0.00 0.00 6.13
4900 5489 0.609131 AAAGGGGAACAGTGATGCCG 60.609 55.000 4.85 0.00 0.00 5.69
4901 5490 0.890683 CAAAGGGGAACAGTGATGCC 59.109 55.000 1.97 1.97 0.00 4.40
4902 5491 0.244721 GCAAAGGGGAACAGTGATGC 59.755 55.000 0.00 0.00 0.00 3.91
4903 5492 1.542915 CAGCAAAGGGGAACAGTGATG 59.457 52.381 0.00 0.00 0.00 3.07
4904 5493 1.915141 CAGCAAAGGGGAACAGTGAT 58.085 50.000 0.00 0.00 0.00 3.06
4905 5494 0.823356 GCAGCAAAGGGGAACAGTGA 60.823 55.000 0.00 0.00 0.00 3.41
4906 5495 1.108727 TGCAGCAAAGGGGAACAGTG 61.109 55.000 0.00 0.00 0.00 3.66
4907 5496 0.396974 TTGCAGCAAAGGGGAACAGT 60.397 50.000 4.99 0.00 0.00 3.55
4908 5497 0.971386 ATTGCAGCAAAGGGGAACAG 59.029 50.000 12.97 0.00 0.00 3.16
4909 5498 0.680618 CATTGCAGCAAAGGGGAACA 59.319 50.000 12.97 0.00 0.00 3.18
4910 5499 0.968405 TCATTGCAGCAAAGGGGAAC 59.032 50.000 12.97 0.00 0.00 3.62
4911 5500 1.259609 CTCATTGCAGCAAAGGGGAA 58.740 50.000 12.97 0.00 0.00 3.97
4912 5501 0.112995 ACTCATTGCAGCAAAGGGGA 59.887 50.000 12.97 6.93 0.00 4.81
4913 5502 0.245539 CACTCATTGCAGCAAAGGGG 59.754 55.000 12.97 10.15 0.00 4.79
4914 5503 3.806591 CACTCATTGCAGCAAAGGG 57.193 52.632 12.97 10.69 0.00 3.95
4940 5529 0.178953 AATGGCAACTGACAAGGCCT 60.179 50.000 0.00 0.00 46.53 5.19
4941 5530 0.037975 CAATGGCAACTGACAAGGCC 60.038 55.000 0.00 0.00 46.58 5.19
4942 5531 0.037975 CCAATGGCAACTGACAAGGC 60.038 55.000 0.00 0.00 36.16 4.35
5009 5598 6.322491 GCTAATTAACAAGGGATTGTGTGTC 58.678 40.000 0.00 0.00 34.99 3.67
5010 5599 5.106317 CGCTAATTAACAAGGGATTGTGTGT 60.106 40.000 0.00 0.00 34.99 3.72
5011 5600 5.106317 ACGCTAATTAACAAGGGATTGTGTG 60.106 40.000 9.22 0.00 34.99 3.82
5012 5601 5.007682 ACGCTAATTAACAAGGGATTGTGT 58.992 37.500 9.22 0.00 34.99 3.72
5013 5602 5.123186 TGACGCTAATTAACAAGGGATTGTG 59.877 40.000 9.22 0.00 34.99 3.33
5014 5603 5.123344 GTGACGCTAATTAACAAGGGATTGT 59.877 40.000 9.22 0.00 36.59 2.71
5034 5623 0.957395 CCACAGGCAGGACATGTGAC 60.957 60.000 1.15 0.00 45.67 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.