Multiple sequence alignment - TraesCS7A01G174000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G174000 chr7A 100.000 4472 0 0 1 4472 128052213 128047742 0.000000e+00 8259.0
1 TraesCS7A01G174000 chr7A 93.436 975 50 5 2283 3257 128024373 128023413 0.000000e+00 1434.0
2 TraesCS7A01G174000 chr7A 80.287 558 73 23 1114 1654 25133716 25133179 1.950000e-103 387.0
3 TraesCS7A01G174000 chr7A 82.299 435 42 19 4058 4466 360345182 360345607 1.190000e-90 344.0
4 TraesCS7A01G174000 chr7A 76.842 570 126 5 1088 1654 25360452 25359886 2.600000e-82 316.0
5 TraesCS7A01G174000 chr7A 79.540 435 44 17 4060 4468 88983102 88982687 7.370000e-68 268.0
6 TraesCS7A01G174000 chr7A 75.087 578 112 16 1087 1654 37847911 37848466 1.610000e-59 241.0
7 TraesCS7A01G174000 chr7A 96.748 123 4 0 2110 2232 128040264 128040142 5.860000e-49 206.0
8 TraesCS7A01G174000 chr7A 94.656 131 6 1 3351 3481 128022995 128022866 7.590000e-48 202.0
9 TraesCS7A01G174000 chr7A 73.194 526 130 10 2105 2623 25359477 25358956 3.550000e-41 180.0
10 TraesCS7A01G174000 chr7A 95.495 111 5 0 3833 3943 176231097 176230987 1.280000e-40 178.0
11 TraesCS7A01G174000 chr7A 78.519 135 27 2 3293 3426 25046988 25046855 2.220000e-13 87.9
12 TraesCS7A01G174000 chr7A 92.727 55 4 0 174 228 640451130 640451184 3.710000e-11 80.5
13 TraesCS7A01G174000 chr7D 94.597 2906 126 10 914 3802 127292404 127289513 0.000000e+00 4468.0
14 TraesCS7A01G174000 chr7D 91.241 548 31 10 3939 4472 127289518 127288974 0.000000e+00 730.0
15 TraesCS7A01G174000 chr7D 80.431 557 74 21 1114 1654 24521345 24520808 4.190000e-105 392.0
16 TraesCS7A01G174000 chr7D 83.753 437 36 15 4058 4466 311192998 311193427 9.080000e-102 381.0
17 TraesCS7A01G174000 chr7D 89.209 278 28 2 1 277 127332281 127332005 3.310000e-91 346.0
18 TraesCS7A01G174000 chr7D 76.000 575 106 19 1087 1654 24920235 24919686 7.370000e-68 268.0
19 TraesCS7A01G174000 chr7D 80.791 354 35 12 446 774 127293003 127292658 3.450000e-61 246.0
20 TraesCS7A01G174000 chr7B 94.806 2753 110 15 911 3655 89204129 89206856 0.000000e+00 4261.0
21 TraesCS7A01G174000 chr7B 82.938 422 39 14 4058 4452 568424092 568424507 2.560000e-92 350.0
22 TraesCS7A01G174000 chr7B 79.387 359 43 17 4135 4468 36447428 36447076 1.620000e-54 224.0
23 TraesCS7A01G174000 chr3A 83.765 425 36 13 4058 4455 746220624 746220206 5.460000e-99 372.0
24 TraesCS7A01G174000 chr1A 83.059 425 34 20 4058 4452 544931488 544931904 7.120000e-93 351.0
25 TraesCS7A01G174000 chr1A 98.582 141 2 0 3800 3940 471571534 471571394 2.670000e-62 250.0
26 TraesCS7A01G174000 chr1A 92.949 156 9 1 3787 3942 22292690 22292537 4.500000e-55 226.0
27 TraesCS7A01G174000 chr1A 87.013 77 4 4 4392 4468 584702848 584702918 1.030000e-11 82.4
28 TraesCS7A01G174000 chr6A 76.471 544 104 17 1114 1654 1831055 1831577 1.580000e-69 274.0
29 TraesCS7A01G174000 chr6A 89.583 48 5 0 1363 1410 1921981 1922028 1.340000e-05 62.1
30 TraesCS7A01G174000 chr5B 98.026 152 2 1 3795 3946 203270554 203270704 3.430000e-66 263.0
31 TraesCS7A01G174000 chr5B 82.759 116 14 5 116 227 548580876 548580763 1.020000e-16 99.0
32 TraesCS7A01G174000 chr4A 75.916 573 104 20 1087 1654 708626391 708625848 3.430000e-66 263.0
33 TraesCS7A01G174000 chr4A 83.673 147 23 1 116 261 534528505 534528651 2.170000e-28 137.0
34 TraesCS7A01G174000 chr4A 78.528 163 33 2 117 277 132986900 132987062 6.120000e-19 106.0
35 TraesCS7A01G174000 chr4A 100.000 28 0 0 1016 1043 351168167 351168140 8.000000e-03 52.8
36 TraesCS7A01G174000 chr6D 92.617 149 9 2 3798 3945 28160626 28160773 3.500000e-51 213.0
37 TraesCS7A01G174000 chr6D 89.781 137 14 0 3804 3940 430305768 430305632 4.600000e-40 176.0
38 TraesCS7A01G174000 chr2D 90.278 144 14 0 3800 3943 118537638 118537495 5.910000e-44 189.0
39 TraesCS7A01G174000 chr2D 79.762 168 31 3 116 282 621544955 621544790 7.860000e-23 119.0
40 TraesCS7A01G174000 chr3B 88.667 150 15 1 3795 3942 55771137 55770988 9.880000e-42 182.0
41 TraesCS7A01G174000 chr5A 90.000 140 13 1 3790 3928 708124566 708124705 3.550000e-41 180.0
42 TraesCS7A01G174000 chr2B 82.840 169 27 2 116 282 659650443 659650611 2.790000e-32 150.0
43 TraesCS7A01G174000 chr1B 87.903 124 10 3 4345 4468 678280563 678280681 1.680000e-29 141.0
44 TraesCS7A01G174000 chr6B 80.814 172 26 3 116 281 548131210 548131380 1.310000e-25 128.0
45 TraesCS7A01G174000 chr4D 80.240 167 33 0 117 283 339081885 339081719 4.700000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G174000 chr7A 128047742 128052213 4471 True 8259.000000 8259 100.000000 1 4472 1 chr7A.!!$R5 4471
1 TraesCS7A01G174000 chr7A 128022866 128024373 1507 True 818.000000 1434 94.046000 2283 3481 2 chr7A.!!$R8 1198
2 TraesCS7A01G174000 chr7A 25133179 25133716 537 True 387.000000 387 80.287000 1114 1654 1 chr7A.!!$R2 540
3 TraesCS7A01G174000 chr7A 25358956 25360452 1496 True 248.000000 316 75.018000 1088 2623 2 chr7A.!!$R7 1535
4 TraesCS7A01G174000 chr7A 37847911 37848466 555 False 241.000000 241 75.087000 1087 1654 1 chr7A.!!$F1 567
5 TraesCS7A01G174000 chr7D 127288974 127293003 4029 True 1814.666667 4468 88.876333 446 4472 3 chr7D.!!$R4 4026
6 TraesCS7A01G174000 chr7D 24520808 24521345 537 True 392.000000 392 80.431000 1114 1654 1 chr7D.!!$R1 540
7 TraesCS7A01G174000 chr7D 24919686 24920235 549 True 268.000000 268 76.000000 1087 1654 1 chr7D.!!$R2 567
8 TraesCS7A01G174000 chr7B 89204129 89206856 2727 False 4261.000000 4261 94.806000 911 3655 1 chr7B.!!$F1 2744
9 TraesCS7A01G174000 chr6A 1831055 1831577 522 False 274.000000 274 76.471000 1114 1654 1 chr6A.!!$F1 540
10 TraesCS7A01G174000 chr4A 708625848 708626391 543 True 263.000000 263 75.916000 1087 1654 1 chr4A.!!$R2 567

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.032952 TTGCCACGTCACCACTAGTC 59.967 55.000 0.00 0.00 0.00 2.59 F
346 347 0.040157 ATGAACACGTGCATGCACAC 60.040 50.000 40.95 27.46 46.47 3.82 F
903 982 0.110486 GGGCCCTTTCAGTTGTGAGA 59.890 55.000 17.04 0.00 32.98 3.27 F
987 1142 1.064060 GAGCATAATTCCACACGCACC 59.936 52.381 0.00 0.00 0.00 5.01 F
2927 3179 0.599204 GAGAAGTTTCCGTCACCGCA 60.599 55.000 0.00 0.00 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1657 1859 0.952280 GGCTGATGATGAGGCACATG 59.048 55.000 1.04 0.00 39.56 3.21 R
1659 1861 1.153309 CGGCTGATGATGAGGCACA 60.153 57.895 6.26 0.00 35.77 4.57 R
1785 1999 1.372997 ACTTGTGACGCTGTAGCCG 60.373 57.895 0.00 0.00 37.91 5.52 R
2972 3224 1.039233 TACCAGGTAGGCGCAGTACC 61.039 60.000 24.02 24.02 43.14 3.34 R
3950 4528 0.035458 AGGACAGCTAGTGGTTGTGC 59.965 55.000 6.87 6.87 44.92 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.994744 GTTGCCTTCCAATGCCAC 57.005 55.556 0.00 0.00 35.55 5.01
18 19 2.354902 GTTGCCTTCCAATGCCACT 58.645 52.632 0.00 0.00 35.55 4.00
19 20 1.544724 GTTGCCTTCCAATGCCACTA 58.455 50.000 0.00 0.00 35.55 2.74
20 21 2.102578 GTTGCCTTCCAATGCCACTAT 58.897 47.619 0.00 0.00 35.55 2.12
21 22 2.497273 GTTGCCTTCCAATGCCACTATT 59.503 45.455 0.00 0.00 35.55 1.73
22 23 3.660970 TGCCTTCCAATGCCACTATTA 57.339 42.857 0.00 0.00 0.00 0.98
23 24 3.974719 TGCCTTCCAATGCCACTATTAA 58.025 40.909 0.00 0.00 0.00 1.40
24 25 4.545678 TGCCTTCCAATGCCACTATTAAT 58.454 39.130 0.00 0.00 0.00 1.40
25 26 5.700183 TGCCTTCCAATGCCACTATTAATA 58.300 37.500 0.00 0.00 0.00 0.98
26 27 6.314120 TGCCTTCCAATGCCACTATTAATAT 58.686 36.000 0.00 0.00 0.00 1.28
27 28 6.782000 TGCCTTCCAATGCCACTATTAATATT 59.218 34.615 0.00 0.00 0.00 1.28
28 29 7.947332 TGCCTTCCAATGCCACTATTAATATTA 59.053 33.333 0.00 0.00 0.00 0.98
29 30 8.802267 GCCTTCCAATGCCACTATTAATATTAA 58.198 33.333 10.27 10.27 0.00 1.40
33 34 8.792633 TCCAATGCCACTATTAATATTAACAGC 58.207 33.333 12.44 10.24 0.00 4.40
34 35 7.750458 CCAATGCCACTATTAATATTAACAGCG 59.250 37.037 12.44 4.32 0.00 5.18
35 36 8.503196 CAATGCCACTATTAATATTAACAGCGA 58.497 33.333 12.44 0.00 0.00 4.93
36 37 7.416154 TGCCACTATTAATATTAACAGCGAC 57.584 36.000 12.44 4.05 0.00 5.19
37 38 6.144886 TGCCACTATTAATATTAACAGCGACG 59.855 38.462 12.44 0.00 0.00 5.12
38 39 6.522761 CCACTATTAATATTAACAGCGACGC 58.477 40.000 13.03 13.03 0.00 5.19
39 40 6.400727 CCACTATTAATATTAACAGCGACGCC 60.401 42.308 17.79 0.00 0.00 5.68
40 41 6.144886 CACTATTAATATTAACAGCGACGCCA 59.855 38.462 17.79 0.00 0.00 5.69
41 42 5.994887 ATTAATATTAACAGCGACGCCAA 57.005 34.783 17.79 6.23 0.00 4.52
42 43 5.994887 TTAATATTAACAGCGACGCCAAT 57.005 34.783 17.79 13.06 0.00 3.16
43 44 4.893424 AATATTAACAGCGACGCCAATT 57.107 36.364 17.79 10.96 0.00 2.32
44 45 2.542766 ATTAACAGCGACGCCAATTG 57.457 45.000 17.79 10.85 0.00 2.32
45 46 1.231221 TTAACAGCGACGCCAATTGT 58.769 45.000 17.79 11.57 0.00 2.71
46 47 1.231221 TAACAGCGACGCCAATTGTT 58.769 45.000 23.09 23.09 36.15 2.83
47 48 0.317770 AACAGCGACGCCAATTGTTG 60.318 50.000 20.23 11.85 31.34 3.33
57 58 1.810959 CCAATTGTTGGCATTGGGTG 58.189 50.000 9.29 0.00 45.17 4.61
65 66 2.258286 GCATTGGGTGCCAACGTC 59.742 61.111 0.00 0.00 46.95 4.34
66 67 2.560119 GCATTGGGTGCCAACGTCA 61.560 57.895 0.00 0.00 46.95 4.35
67 68 1.285641 CATTGGGTGCCAACGTCAC 59.714 57.895 0.00 0.00 46.95 3.67
68 69 1.901464 ATTGGGTGCCAACGTCACC 60.901 57.895 14.85 14.85 46.95 4.02
72 73 3.030652 GTGCCAACGTCACCAAGG 58.969 61.111 0.00 0.00 0.00 3.61
73 74 2.904866 TGCCAACGTCACCAAGGC 60.905 61.111 0.00 0.00 45.41 4.35
74 75 3.670377 GCCAACGTCACCAAGGCC 61.670 66.667 0.00 0.00 39.42 5.19
75 76 2.113139 CCAACGTCACCAAGGCCT 59.887 61.111 0.00 0.00 0.00 5.19
76 77 1.528309 CCAACGTCACCAAGGCCTT 60.528 57.895 13.78 13.78 0.00 4.35
77 78 1.106944 CCAACGTCACCAAGGCCTTT 61.107 55.000 17.61 0.00 0.00 3.11
78 79 0.744281 CAACGTCACCAAGGCCTTTT 59.256 50.000 17.61 2.22 0.00 2.27
79 80 1.136110 CAACGTCACCAAGGCCTTTTT 59.864 47.619 17.61 1.78 0.00 1.94
94 95 2.875188 TTTTTGCCACGTCACCACT 58.125 47.368 0.00 0.00 0.00 4.00
95 96 2.039818 TTTTTGCCACGTCACCACTA 57.960 45.000 0.00 0.00 0.00 2.74
96 97 1.588674 TTTTGCCACGTCACCACTAG 58.411 50.000 0.00 0.00 0.00 2.57
97 98 0.466543 TTTGCCACGTCACCACTAGT 59.533 50.000 0.00 0.00 0.00 2.57
98 99 0.032952 TTGCCACGTCACCACTAGTC 59.967 55.000 0.00 0.00 0.00 2.59
99 100 0.826256 TGCCACGTCACCACTAGTCT 60.826 55.000 0.00 0.00 0.00 3.24
100 101 0.317479 GCCACGTCACCACTAGTCTT 59.683 55.000 0.00 0.00 0.00 3.01
101 102 1.270147 GCCACGTCACCACTAGTCTTT 60.270 52.381 0.00 0.00 0.00 2.52
102 103 2.805657 GCCACGTCACCACTAGTCTTTT 60.806 50.000 0.00 0.00 0.00 2.27
103 104 3.463944 CCACGTCACCACTAGTCTTTTT 58.536 45.455 0.00 0.00 0.00 1.94
104 105 3.493503 CCACGTCACCACTAGTCTTTTTC 59.506 47.826 0.00 0.00 0.00 2.29
105 106 4.369182 CACGTCACCACTAGTCTTTTTCT 58.631 43.478 0.00 0.00 0.00 2.52
106 107 4.209288 CACGTCACCACTAGTCTTTTTCTG 59.791 45.833 0.00 0.00 0.00 3.02
107 108 3.184581 CGTCACCACTAGTCTTTTTCTGC 59.815 47.826 0.00 0.00 0.00 4.26
108 109 4.127171 GTCACCACTAGTCTTTTTCTGCA 58.873 43.478 0.00 0.00 0.00 4.41
109 110 4.024809 GTCACCACTAGTCTTTTTCTGCAC 60.025 45.833 0.00 0.00 0.00 4.57
110 111 4.130118 CACCACTAGTCTTTTTCTGCACT 58.870 43.478 0.00 0.00 0.00 4.40
111 112 5.069914 TCACCACTAGTCTTTTTCTGCACTA 59.930 40.000 0.00 0.00 0.00 2.74
112 113 5.406780 CACCACTAGTCTTTTTCTGCACTAG 59.593 44.000 0.00 3.87 42.74 2.57
115 116 6.163135 ACTAGTCTTTTTCTGCACTAGTGT 57.837 37.500 23.44 2.31 46.35 3.55
116 117 5.986135 ACTAGTCTTTTTCTGCACTAGTGTG 59.014 40.000 23.44 16.29 46.35 3.82
117 118 4.770795 AGTCTTTTTCTGCACTAGTGTGT 58.229 39.130 23.44 0.00 45.44 3.72
118 119 5.914033 AGTCTTTTTCTGCACTAGTGTGTA 58.086 37.500 23.44 10.04 45.44 2.90
119 120 6.525629 AGTCTTTTTCTGCACTAGTGTGTAT 58.474 36.000 23.44 0.00 45.44 2.29
120 121 6.647067 AGTCTTTTTCTGCACTAGTGTGTATC 59.353 38.462 23.44 7.55 45.44 2.24
121 122 6.647067 GTCTTTTTCTGCACTAGTGTGTATCT 59.353 38.462 23.44 0.00 45.44 1.98
122 123 6.868864 TCTTTTTCTGCACTAGTGTGTATCTC 59.131 38.462 23.44 6.13 45.44 2.75
123 124 5.722021 TTTCTGCACTAGTGTGTATCTCA 57.278 39.130 23.44 10.31 45.44 3.27
124 125 5.722021 TTCTGCACTAGTGTGTATCTCAA 57.278 39.130 23.44 4.59 45.44 3.02
125 126 5.921962 TCTGCACTAGTGTGTATCTCAAT 57.078 39.130 23.44 0.00 45.44 2.57
126 127 6.286240 TCTGCACTAGTGTGTATCTCAATT 57.714 37.500 23.44 0.00 45.44 2.32
127 128 6.333416 TCTGCACTAGTGTGTATCTCAATTC 58.667 40.000 23.44 3.32 45.44 2.17
128 129 6.153510 TCTGCACTAGTGTGTATCTCAATTCT 59.846 38.462 23.44 0.00 45.44 2.40
129 130 6.701340 TGCACTAGTGTGTATCTCAATTCTT 58.299 36.000 23.44 0.00 45.44 2.52
130 131 7.836842 TGCACTAGTGTGTATCTCAATTCTTA 58.163 34.615 23.44 0.00 45.44 2.10
131 132 8.478066 TGCACTAGTGTGTATCTCAATTCTTAT 58.522 33.333 23.44 0.00 45.44 1.73
132 133 9.967346 GCACTAGTGTGTATCTCAATTCTTATA 57.033 33.333 23.44 0.00 45.44 0.98
193 194 8.870075 AAAAATCTTTGAGTCTAGGCTAATGT 57.130 30.769 0.00 0.00 0.00 2.71
194 195 8.870075 AAAATCTTTGAGTCTAGGCTAATGTT 57.130 30.769 0.00 0.00 0.00 2.71
195 196 8.870075 AAATCTTTGAGTCTAGGCTAATGTTT 57.130 30.769 0.00 0.00 0.00 2.83
196 197 8.870075 AATCTTTGAGTCTAGGCTAATGTTTT 57.130 30.769 0.00 0.00 0.00 2.43
197 198 8.870075 ATCTTTGAGTCTAGGCTAATGTTTTT 57.130 30.769 0.00 0.00 0.00 1.94
220 221 9.898152 TTTTTCTTTAAAATGTGAAGGATTGGT 57.102 25.926 0.00 0.00 34.62 3.67
221 222 9.898152 TTTTCTTTAAAATGTGAAGGATTGGTT 57.102 25.926 0.00 0.00 29.59 3.67
222 223 9.541143 TTTCTTTAAAATGTGAAGGATTGGTTC 57.459 29.630 0.00 0.00 0.00 3.62
223 224 7.666623 TCTTTAAAATGTGAAGGATTGGTTCC 58.333 34.615 0.00 0.00 45.85 3.62
236 237 6.187727 GGATTGGTTCCTATCCAACATAGA 57.812 41.667 21.26 0.00 45.84 1.98
237 238 6.601332 GGATTGGTTCCTATCCAACATAGAA 58.399 40.000 21.26 0.00 45.84 2.10
238 239 7.060421 GGATTGGTTCCTATCCAACATAGAAA 58.940 38.462 21.26 0.00 45.84 2.52
239 240 7.725844 GGATTGGTTCCTATCCAACATAGAAAT 59.274 37.037 21.26 0.00 45.84 2.17
240 241 9.136323 GATTGGTTCCTATCCAACATAGAAATT 57.864 33.333 0.00 0.00 45.84 1.82
241 242 7.880160 TGGTTCCTATCCAACATAGAAATTG 57.120 36.000 0.00 0.00 31.50 2.32
242 243 6.833416 TGGTTCCTATCCAACATAGAAATTGG 59.167 38.462 0.00 0.00 45.78 3.16
256 257 9.699410 ACATAGAAATTGGAATCCATTTCTACA 57.301 29.630 28.45 19.57 41.03 2.74
260 261 8.314021 AGAAATTGGAATCCATTTCTACAAACC 58.686 33.333 24.68 8.09 38.40 3.27
261 262 7.797121 AATTGGAATCCATTTCTACAAACCT 57.203 32.000 1.39 0.00 34.56 3.50
262 263 8.893563 AATTGGAATCCATTTCTACAAACCTA 57.106 30.769 1.39 0.00 34.56 3.08
263 264 8.893563 ATTGGAATCCATTTCTACAAACCTAA 57.106 30.769 1.39 0.00 34.56 2.69
264 265 7.938140 TGGAATCCATTTCTACAAACCTAAG 57.062 36.000 0.00 0.00 34.56 2.18
265 266 6.889722 TGGAATCCATTTCTACAAACCTAAGG 59.110 38.462 0.00 0.00 34.56 2.69
266 267 6.321435 GGAATCCATTTCTACAAACCTAAGGG 59.679 42.308 0.00 0.00 34.56 3.95
267 268 6.652205 ATCCATTTCTACAAACCTAAGGGA 57.348 37.500 0.00 0.00 36.25 4.20
268 269 6.652205 TCCATTTCTACAAACCTAAGGGAT 57.348 37.500 0.00 0.00 36.25 3.85
269 270 7.039722 TCCATTTCTACAAACCTAAGGGATT 57.960 36.000 0.00 0.00 36.25 3.01
270 271 7.116736 TCCATTTCTACAAACCTAAGGGATTC 58.883 38.462 0.00 0.00 36.25 2.52
271 272 6.889722 CCATTTCTACAAACCTAAGGGATTCA 59.110 38.462 0.00 0.00 36.25 2.57
272 273 7.396055 CCATTTCTACAAACCTAAGGGATTCAA 59.604 37.037 0.00 0.00 36.25 2.69
273 274 8.802267 CATTTCTACAAACCTAAGGGATTCAAA 58.198 33.333 0.00 0.00 36.25 2.69
274 275 7.996098 TTCTACAAACCTAAGGGATTCAAAG 57.004 36.000 0.00 0.00 36.25 2.77
275 276 7.324388 TCTACAAACCTAAGGGATTCAAAGA 57.676 36.000 0.00 0.00 36.25 2.52
276 277 7.751646 TCTACAAACCTAAGGGATTCAAAGAA 58.248 34.615 0.00 0.00 36.25 2.52
277 278 8.390921 TCTACAAACCTAAGGGATTCAAAGAAT 58.609 33.333 0.00 0.00 36.25 2.40
278 279 7.855784 ACAAACCTAAGGGATTCAAAGAATT 57.144 32.000 0.00 0.00 36.25 2.17
279 280 8.262601 ACAAACCTAAGGGATTCAAAGAATTT 57.737 30.769 0.00 0.00 35.82 1.82
280 281 8.713971 ACAAACCTAAGGGATTCAAAGAATTTT 58.286 29.630 0.00 0.00 34.01 1.82
281 282 9.559732 CAAACCTAAGGGATTCAAAGAATTTTT 57.440 29.630 0.00 0.00 34.01 1.94
307 308 8.938801 TTTCCTACATAATACTCCCGTATACA 57.061 34.615 3.32 0.00 35.32 2.29
308 309 7.928307 TCCTACATAATACTCCCGTATACAC 57.072 40.000 3.32 0.00 35.32 2.90
325 326 7.224710 CGTATACACGCACATACATTTATTCC 58.775 38.462 3.32 0.00 42.05 3.01
326 327 4.893424 ACACGCACATACATTTATTCCC 57.107 40.909 0.00 0.00 0.00 3.97
327 328 4.265893 ACACGCACATACATTTATTCCCA 58.734 39.130 0.00 0.00 0.00 4.37
328 329 4.887071 ACACGCACATACATTTATTCCCAT 59.113 37.500 0.00 0.00 0.00 4.00
329 330 5.214417 CACGCACATACATTTATTCCCATG 58.786 41.667 0.00 0.00 0.00 3.66
330 331 5.008514 CACGCACATACATTTATTCCCATGA 59.991 40.000 0.00 0.00 0.00 3.07
331 332 5.592282 ACGCACATACATTTATTCCCATGAA 59.408 36.000 0.00 0.00 34.33 2.57
332 333 5.914635 CGCACATACATTTATTCCCATGAAC 59.085 40.000 0.00 0.00 32.13 3.18
333 334 6.459435 CGCACATACATTTATTCCCATGAACA 60.459 38.462 0.00 0.00 32.13 3.18
334 335 6.697019 GCACATACATTTATTCCCATGAACAC 59.303 38.462 0.00 0.00 32.13 3.32
335 336 6.912051 CACATACATTTATTCCCATGAACACG 59.088 38.462 0.00 0.00 32.13 4.49
336 337 6.601613 ACATACATTTATTCCCATGAACACGT 59.398 34.615 0.00 0.00 32.13 4.49
337 338 5.309323 ACATTTATTCCCATGAACACGTG 57.691 39.130 15.48 15.48 32.13 4.49
338 339 3.840890 TTTATTCCCATGAACACGTGC 57.159 42.857 17.22 0.00 32.13 5.34
339 340 2.481289 TATTCCCATGAACACGTGCA 57.519 45.000 17.22 6.92 32.13 4.57
340 341 1.838112 ATTCCCATGAACACGTGCAT 58.162 45.000 17.22 9.25 32.13 3.96
341 342 0.880441 TTCCCATGAACACGTGCATG 59.120 50.000 22.12 22.12 41.11 4.06
342 343 1.153978 CCCATGAACACGTGCATGC 60.154 57.895 23.11 11.82 40.33 4.06
343 344 1.580437 CCATGAACACGTGCATGCA 59.420 52.632 23.11 18.46 40.33 3.96
344 345 0.730155 CCATGAACACGTGCATGCAC 60.730 55.000 35.76 35.76 40.33 4.57
345 346 0.040246 CATGAACACGTGCATGCACA 60.040 50.000 40.95 26.05 46.47 4.57
346 347 0.040157 ATGAACACGTGCATGCACAC 60.040 50.000 40.95 27.46 46.47 3.82
347 348 1.370414 GAACACGTGCATGCACACC 60.370 57.895 40.95 24.20 46.47 4.16
348 349 2.731587 GAACACGTGCATGCACACCC 62.732 60.000 40.95 24.51 46.47 4.61
349 350 2.979676 CACGTGCATGCACACCCT 60.980 61.111 40.95 22.46 46.47 4.34
350 351 1.670730 CACGTGCATGCACACCCTA 60.671 57.895 40.95 9.62 46.47 3.53
351 352 1.671054 ACGTGCATGCACACCCTAC 60.671 57.895 40.95 19.69 46.47 3.18
352 353 2.398554 CGTGCATGCACACCCTACC 61.399 63.158 40.95 19.01 46.47 3.18
353 354 1.002134 GTGCATGCACACCCTACCT 60.002 57.895 39.12 0.00 45.53 3.08
354 355 1.026718 GTGCATGCACACCCTACCTC 61.027 60.000 39.12 13.39 45.53 3.85
355 356 1.200760 TGCATGCACACCCTACCTCT 61.201 55.000 18.46 0.00 0.00 3.69
356 357 0.830648 GCATGCACACCCTACCTCTA 59.169 55.000 14.21 0.00 0.00 2.43
357 358 1.417890 GCATGCACACCCTACCTCTAT 59.582 52.381 14.21 0.00 0.00 1.98
358 359 2.808202 GCATGCACACCCTACCTCTATG 60.808 54.545 14.21 0.00 0.00 2.23
359 360 1.496060 TGCACACCCTACCTCTATGG 58.504 55.000 0.00 0.00 42.93 2.74
360 361 0.759346 GCACACCCTACCTCTATGGG 59.241 60.000 0.00 0.00 46.07 4.00
361 362 0.759346 CACACCCTACCTCTATGGGC 59.241 60.000 0.00 0.00 44.56 5.36
362 363 0.341961 ACACCCTACCTCTATGGGCA 59.658 55.000 0.00 0.00 44.56 5.36
363 364 0.759346 CACCCTACCTCTATGGGCAC 59.241 60.000 0.00 0.00 44.56 5.01
378 379 2.396590 GGCACCTCTGAAATACCGAA 57.603 50.000 0.00 0.00 0.00 4.30
379 380 2.706890 GGCACCTCTGAAATACCGAAA 58.293 47.619 0.00 0.00 0.00 3.46
380 381 2.418976 GGCACCTCTGAAATACCGAAAC 59.581 50.000 0.00 0.00 0.00 2.78
381 382 3.071479 GCACCTCTGAAATACCGAAACA 58.929 45.455 0.00 0.00 0.00 2.83
382 383 3.500680 GCACCTCTGAAATACCGAAACAA 59.499 43.478 0.00 0.00 0.00 2.83
383 384 4.612939 GCACCTCTGAAATACCGAAACAAC 60.613 45.833 0.00 0.00 0.00 3.32
384 385 4.513692 CACCTCTGAAATACCGAAACAACA 59.486 41.667 0.00 0.00 0.00 3.33
385 386 4.514066 ACCTCTGAAATACCGAAACAACAC 59.486 41.667 0.00 0.00 0.00 3.32
386 387 4.513692 CCTCTGAAATACCGAAACAACACA 59.486 41.667 0.00 0.00 0.00 3.72
387 388 5.008217 CCTCTGAAATACCGAAACAACACAA 59.992 40.000 0.00 0.00 0.00 3.33
388 389 5.812652 TCTGAAATACCGAAACAACACAAC 58.187 37.500 0.00 0.00 0.00 3.32
389 390 4.589252 TGAAATACCGAAACAACACAACG 58.411 39.130 0.00 0.00 0.00 4.10
390 391 4.094590 TGAAATACCGAAACAACACAACGT 59.905 37.500 0.00 0.00 0.00 3.99
391 392 3.865224 ATACCGAAACAACACAACGTC 57.135 42.857 0.00 0.00 0.00 4.34
392 393 1.729284 ACCGAAACAACACAACGTCT 58.271 45.000 0.00 0.00 0.00 4.18
393 394 2.078392 ACCGAAACAACACAACGTCTT 58.922 42.857 0.00 0.00 0.00 3.01
394 395 2.159626 ACCGAAACAACACAACGTCTTG 60.160 45.455 0.00 0.00 0.00 3.02
395 396 2.094575 CCGAAACAACACAACGTCTTGA 59.905 45.455 3.50 0.00 0.00 3.02
396 397 3.342269 CGAAACAACACAACGTCTTGAG 58.658 45.455 3.50 0.00 0.00 3.02
397 398 3.061563 CGAAACAACACAACGTCTTGAGA 59.938 43.478 3.50 0.00 0.00 3.27
398 399 4.260212 CGAAACAACACAACGTCTTGAGAT 60.260 41.667 3.50 0.00 0.00 2.75
399 400 5.560966 AAACAACACAACGTCTTGAGATT 57.439 34.783 3.50 0.00 0.00 2.40
400 401 4.536364 ACAACACAACGTCTTGAGATTG 57.464 40.909 3.50 3.31 0.00 2.67
401 402 4.188462 ACAACACAACGTCTTGAGATTGA 58.812 39.130 3.50 0.00 0.00 2.57
402 403 4.034048 ACAACACAACGTCTTGAGATTGAC 59.966 41.667 3.50 0.00 0.00 3.18
403 404 3.792401 ACACAACGTCTTGAGATTGACA 58.208 40.909 3.50 0.00 33.18 3.58
404 405 4.188462 ACACAACGTCTTGAGATTGACAA 58.812 39.130 3.50 0.00 33.18 3.18
405 406 4.634004 ACACAACGTCTTGAGATTGACAAA 59.366 37.500 3.50 0.00 33.18 2.83
406 407 5.123186 ACACAACGTCTTGAGATTGACAAAA 59.877 36.000 3.50 0.00 33.18 2.44
407 408 6.027131 CACAACGTCTTGAGATTGACAAAAA 58.973 36.000 0.00 0.00 33.18 1.94
426 427 5.581126 AAAAAGTCAGCACAACATCTTGA 57.419 34.783 0.00 0.00 0.00 3.02
427 428 5.581126 AAAAGTCAGCACAACATCTTGAA 57.419 34.783 0.00 0.00 0.00 2.69
428 429 4.825546 AAGTCAGCACAACATCTTGAAG 57.174 40.909 0.00 0.00 0.00 3.02
429 430 3.813443 AGTCAGCACAACATCTTGAAGT 58.187 40.909 0.00 0.00 0.00 3.01
430 431 4.202441 AGTCAGCACAACATCTTGAAGTT 58.798 39.130 0.00 0.00 0.00 2.66
431 432 4.641989 AGTCAGCACAACATCTTGAAGTTT 59.358 37.500 0.00 0.00 0.00 2.66
432 433 5.126061 AGTCAGCACAACATCTTGAAGTTTT 59.874 36.000 0.00 0.00 0.00 2.43
433 434 5.807011 GTCAGCACAACATCTTGAAGTTTTT 59.193 36.000 0.00 0.00 0.00 1.94
479 480 1.732941 TGACAAAGTCAGCACAACGT 58.267 45.000 0.00 0.00 37.67 3.99
480 481 1.663643 TGACAAAGTCAGCACAACGTC 59.336 47.619 0.00 0.00 37.67 4.34
486 487 0.233332 GTCAGCACAACGTCTTGAGC 59.767 55.000 1.92 1.92 42.51 4.26
489 490 3.444657 GCACAACGTCTTGAGCTTG 57.555 52.632 2.86 0.00 39.95 4.01
495 496 3.438781 ACAACGTCTTGAGCTTGACAAAA 59.561 39.130 13.30 0.00 33.18 2.44
522 528 2.978489 CACCTTCGTAGTCGACAAGAAC 59.022 50.000 19.50 9.10 46.03 3.01
523 529 2.620115 ACCTTCGTAGTCGACAAGAACA 59.380 45.455 19.50 0.00 46.03 3.18
527 533 4.337985 TCGTAGTCGACAAGAACATCTC 57.662 45.455 19.50 0.00 41.35 2.75
528 534 3.126514 TCGTAGTCGACAAGAACATCTCC 59.873 47.826 19.50 0.00 41.35 3.71
546 552 6.070596 ACATCTCCTCTCATTGAACACACATA 60.071 38.462 0.00 0.00 0.00 2.29
549 555 6.014242 TCTCCTCTCATTGAACACACATAGTT 60.014 38.462 0.00 0.00 0.00 2.24
551 557 7.323420 TCCTCTCATTGAACACACATAGTTAG 58.677 38.462 0.00 0.00 0.00 2.34
557 563 5.483685 TGAACACACATAGTTAGAAGGCT 57.516 39.130 0.00 0.00 0.00 4.58
558 564 5.237815 TGAACACACATAGTTAGAAGGCTG 58.762 41.667 0.00 0.00 0.00 4.85
561 569 5.865085 ACACACATAGTTAGAAGGCTGAAA 58.135 37.500 0.00 0.00 0.00 2.69
586 594 1.606668 TCAGAAAAACATGACCACCGC 59.393 47.619 0.00 0.00 0.00 5.68
610 618 4.323562 GCCAAGTCTATGACAAACCCTAGT 60.324 45.833 0.46 0.00 34.60 2.57
612 620 5.046591 CCAAGTCTATGACAAACCCTAGTGA 60.047 44.000 0.46 0.00 34.60 3.41
614 622 6.681729 AGTCTATGACAAACCCTAGTGAAA 57.318 37.500 0.46 0.00 34.60 2.69
621 629 4.149598 ACAAACCCTAGTGAAATGGTTCC 58.850 43.478 0.08 0.00 40.10 3.62
623 631 1.339727 ACCCTAGTGAAATGGTTCCGC 60.340 52.381 0.00 0.00 32.28 5.54
635 643 2.114411 TTCCGCCACAGGAAACCC 59.886 61.111 0.00 0.00 46.36 4.11
636 644 3.501040 TTCCGCCACAGGAAACCCC 62.501 63.158 0.00 0.00 46.36 4.95
638 646 2.203422 CGCCACAGGAAACCCCAA 60.203 61.111 0.00 0.00 37.41 4.12
640 648 2.207229 GCCACAGGAAACCCCAACC 61.207 63.158 0.00 0.00 37.41 3.77
641 649 1.231641 CCACAGGAAACCCCAACCA 59.768 57.895 0.00 0.00 37.41 3.67
644 652 2.046292 CACAGGAAACCCCAACCATTT 58.954 47.619 0.00 0.00 37.41 2.32
645 653 2.437651 CACAGGAAACCCCAACCATTTT 59.562 45.455 0.00 0.00 37.41 1.82
688 712 2.693797 TCCAAGAGTACGTCAACGAC 57.306 50.000 9.88 3.59 43.02 4.34
690 714 2.555325 TCCAAGAGTACGTCAACGACAT 59.445 45.455 9.88 0.00 43.02 3.06
691 715 3.752747 TCCAAGAGTACGTCAACGACATA 59.247 43.478 9.88 0.00 43.02 2.29
692 716 4.397103 TCCAAGAGTACGTCAACGACATAT 59.603 41.667 9.88 0.00 43.02 1.78
694 718 5.329493 CAAGAGTACGTCAACGACATATCA 58.671 41.667 9.88 0.00 43.02 2.15
695 719 5.752892 AGAGTACGTCAACGACATATCAT 57.247 39.130 9.88 0.00 43.02 2.45
696 720 6.856135 AGAGTACGTCAACGACATATCATA 57.144 37.500 9.88 0.00 43.02 2.15
697 721 7.436430 AGAGTACGTCAACGACATATCATAT 57.564 36.000 9.88 0.00 43.02 1.78
698 722 7.872881 AGAGTACGTCAACGACATATCATATT 58.127 34.615 9.88 0.00 43.02 1.28
746 770 7.633361 TTACAAGAAGTTTAAGTACTCTGCG 57.367 36.000 0.00 0.00 0.00 5.18
747 771 5.839621 ACAAGAAGTTTAAGTACTCTGCGA 58.160 37.500 0.00 0.00 0.00 5.10
748 772 6.278363 ACAAGAAGTTTAAGTACTCTGCGAA 58.722 36.000 0.00 0.00 0.00 4.70
749 773 6.421202 ACAAGAAGTTTAAGTACTCTGCGAAG 59.579 38.462 0.00 0.00 0.00 3.79
750 774 6.328641 AGAAGTTTAAGTACTCTGCGAAGA 57.671 37.500 0.00 0.00 0.00 2.87
781 813 3.688694 TGATACACCCACACTAACACC 57.311 47.619 0.00 0.00 0.00 4.16
783 815 1.702182 TACACCCACACTAACACCGA 58.298 50.000 0.00 0.00 0.00 4.69
798 830 2.990514 ACACCGACAAAACAAACAAAGC 59.009 40.909 0.00 0.00 0.00 3.51
799 831 3.249917 CACCGACAAAACAAACAAAGCT 58.750 40.909 0.00 0.00 0.00 3.74
800 832 3.060628 CACCGACAAAACAAACAAAGCTG 59.939 43.478 0.00 0.00 0.00 4.24
802 834 3.923461 CCGACAAAACAAACAAAGCTGAA 59.077 39.130 0.00 0.00 0.00 3.02
803 835 4.031652 CCGACAAAACAAACAAAGCTGAAG 59.968 41.667 0.00 0.00 0.00 3.02
829 899 4.941263 CCAACAGTGGGATCGAAAAATCTA 59.059 41.667 0.00 0.00 41.77 1.98
849 919 4.681978 GCGCGGGAACAGTGACCT 62.682 66.667 8.83 0.00 0.00 3.85
868 947 6.007076 TGACCTAAATTTCACATTGCCTGTA 58.993 36.000 0.00 0.00 35.91 2.74
869 948 6.491745 TGACCTAAATTTCACATTGCCTGTAA 59.508 34.615 0.00 0.00 35.91 2.41
870 949 6.687604 ACCTAAATTTCACATTGCCTGTAAC 58.312 36.000 0.00 0.00 35.91 2.50
871 950 6.266558 ACCTAAATTTCACATTGCCTGTAACA 59.733 34.615 0.00 0.00 35.91 2.41
872 951 6.586082 CCTAAATTTCACATTGCCTGTAACAC 59.414 38.462 0.00 0.00 35.91 3.32
873 952 5.528043 AATTTCACATTGCCTGTAACACA 57.472 34.783 0.00 0.00 35.91 3.72
874 953 4.566545 TTTCACATTGCCTGTAACACAG 57.433 40.909 0.00 0.00 45.53 3.66
900 979 0.890683 GATGGGCCCTTTCAGTTGTG 59.109 55.000 25.70 0.00 0.00 3.33
901 980 0.482446 ATGGGCCCTTTCAGTTGTGA 59.518 50.000 25.70 0.00 0.00 3.58
902 981 0.178992 TGGGCCCTTTCAGTTGTGAG 60.179 55.000 25.70 0.00 32.98 3.51
903 982 0.110486 GGGCCCTTTCAGTTGTGAGA 59.890 55.000 17.04 0.00 32.98 3.27
905 984 2.306847 GGCCCTTTCAGTTGTGAGAAA 58.693 47.619 0.00 0.00 32.98 2.52
907 986 3.243535 GGCCCTTTCAGTTGTGAGAAAAG 60.244 47.826 0.00 0.00 33.75 2.27
908 987 3.796844 GCCCTTTCAGTTGTGAGAAAAGC 60.797 47.826 0.00 0.00 33.75 3.51
909 988 3.243535 CCCTTTCAGTTGTGAGAAAAGCC 60.244 47.826 0.00 0.00 33.75 4.35
966 1121 3.301274 AGAACCTTTCCGCTAGATAGCT 58.699 45.455 9.98 0.00 46.85 3.32
972 1127 1.916506 TCCGCTAGATAGCTGAGCAT 58.083 50.000 7.39 0.00 46.85 3.79
975 1130 4.019858 TCCGCTAGATAGCTGAGCATAAT 58.980 43.478 7.39 0.00 46.85 1.28
978 1133 4.803088 CGCTAGATAGCTGAGCATAATTCC 59.197 45.833 7.39 0.00 46.85 3.01
987 1142 1.064060 GAGCATAATTCCACACGCACC 59.936 52.381 0.00 0.00 0.00 5.01
1026 1186 4.496336 GGCTTGCTGGCCGGAGAT 62.496 66.667 18.31 0.00 42.82 2.75
1132 1292 2.244117 GAGCAACGAGGCCTCCATGA 62.244 60.000 28.08 0.00 0.00 3.07
1167 1327 3.390521 ATGTTCCTCCTCGCCGCA 61.391 61.111 0.00 0.00 0.00 5.69
1657 1859 4.505808 CCTCATCATCTCCTACATGCATC 58.494 47.826 0.00 0.00 0.00 3.91
1659 1861 5.338463 CCTCATCATCTCCTACATGCATCAT 60.338 44.000 0.00 0.00 0.00 2.45
1660 1862 5.488341 TCATCATCTCCTACATGCATCATG 58.512 41.667 0.00 5.35 46.18 3.07
1801 2015 2.048597 CCGGCTACAGCGTCACAA 60.049 61.111 0.00 0.00 43.26 3.33
1893 2133 2.126031 GCCTCCGTCGACCAAGAC 60.126 66.667 10.58 0.00 37.76 3.01
2029 2269 0.613777 CTTCGAAGGGGGCTTGTACT 59.386 55.000 17.70 0.00 0.00 2.73
2103 2346 2.768527 AGTAGCAGCAGCAGAGGAATTA 59.231 45.455 3.17 0.00 45.49 1.40
2241 2484 2.977178 CTGCTCCTCTGCCTCGTT 59.023 61.111 0.00 0.00 0.00 3.85
2540 2783 4.697756 CCGGAGCGCCACCTTCAA 62.698 66.667 17.03 0.00 0.00 2.69
2728 2980 3.739703 TCCATCGCGGAGTACCTAT 57.260 52.632 6.13 0.00 39.64 2.57
2729 2981 1.991121 TCCATCGCGGAGTACCTATT 58.009 50.000 6.13 0.00 39.64 1.73
2730 2982 3.144657 TCCATCGCGGAGTACCTATTA 57.855 47.619 6.13 0.00 39.64 0.98
2731 2983 2.816087 TCCATCGCGGAGTACCTATTAC 59.184 50.000 6.13 0.00 39.64 1.89
2732 2984 2.818432 CCATCGCGGAGTACCTATTACT 59.182 50.000 6.13 0.00 44.35 2.24
2926 3178 1.289800 GGAGAAGTTTCCGTCACCGC 61.290 60.000 0.00 0.00 0.00 5.68
2927 3179 0.599204 GAGAAGTTTCCGTCACCGCA 60.599 55.000 0.00 0.00 0.00 5.69
3161 3413 1.756408 ATCATGCGCCTGGAGGAGAG 61.756 60.000 12.90 0.00 37.14 3.20
3488 4066 1.996798 TAGGAGGGGTTATCTGCGAG 58.003 55.000 0.00 0.00 0.00 5.03
3516 4094 2.802787 AGATGATGTAGGTGCTACGC 57.197 50.000 0.00 0.00 39.58 4.42
3628 4206 6.707440 TGGTTAATTTGCTCTGTTTCTTGA 57.293 33.333 0.00 0.00 0.00 3.02
3637 4215 6.492007 TGCTCTGTTTCTTGATTCTCAATC 57.508 37.500 0.00 0.00 35.59 2.67
3655 4233 4.913126 CTGACTAGGACAACGCCC 57.087 61.111 0.00 0.00 0.00 6.13
3728 4306 7.286087 TCTGATGAATAAGTTTGGGAATCCATG 59.714 37.037 0.09 0.00 43.63 3.66
3736 4314 2.734755 TGGGAATCCATGCTACCTTG 57.265 50.000 0.09 0.00 38.32 3.61
3749 4327 3.119531 TGCTACCTTGGAAAATGAATGCG 60.120 43.478 0.00 0.00 0.00 4.73
3778 4356 2.738846 CTGATTCTGTCACAACCCTTCG 59.261 50.000 0.00 0.00 32.22 3.79
3779 4357 2.076863 GATTCTGTCACAACCCTTCGG 58.923 52.381 0.00 0.00 0.00 4.30
3792 4370 2.303600 ACCCTTCGGCAATTGTGTACTA 59.696 45.455 7.40 0.00 0.00 1.82
3802 4380 6.691818 CGGCAATTGTGTACTACTACTTAGAG 59.308 42.308 7.40 0.00 0.00 2.43
3803 4381 6.476053 GGCAATTGTGTACTACTACTTAGAGC 59.524 42.308 7.40 0.00 0.00 4.09
3805 4383 7.630944 GCAATTGTGTACTACTACTTAGAGCCT 60.631 40.741 7.40 0.00 0.00 4.58
3806 4384 6.754702 TTGTGTACTACTACTTAGAGCCTG 57.245 41.667 0.00 0.00 0.00 4.85
3807 4385 5.813383 TGTGTACTACTACTTAGAGCCTGT 58.187 41.667 0.00 0.00 0.00 4.00
3808 4386 6.243900 TGTGTACTACTACTTAGAGCCTGTT 58.756 40.000 0.00 0.00 0.00 3.16
3809 4387 6.373774 TGTGTACTACTACTTAGAGCCTGTTC 59.626 42.308 0.00 0.00 0.00 3.18
3810 4388 5.583854 TGTACTACTACTTAGAGCCTGTTCG 59.416 44.000 0.00 0.00 0.00 3.95
3811 4389 3.946558 ACTACTACTTAGAGCCTGTTCGG 59.053 47.826 0.00 0.00 0.00 4.30
3812 4390 2.100989 ACTACTTAGAGCCTGTTCGGG 58.899 52.381 0.00 0.00 0.00 5.14
3820 4398 2.896443 CCTGTTCGGGCTCTCTCC 59.104 66.667 0.00 0.00 0.00 3.71
3821 4399 2.726351 CCTGTTCGGGCTCTCTCCC 61.726 68.421 0.00 0.00 43.02 4.30
3829 4407 3.077556 GCTCTCTCCCGGCTCCAA 61.078 66.667 0.00 0.00 0.00 3.53
3830 4408 2.896443 CTCTCTCCCGGCTCCAAC 59.104 66.667 0.00 0.00 0.00 3.77
3831 4409 1.684049 CTCTCTCCCGGCTCCAACT 60.684 63.158 0.00 0.00 0.00 3.16
3832 4410 1.671901 CTCTCTCCCGGCTCCAACTC 61.672 65.000 0.00 0.00 0.00 3.01
3833 4411 2.683933 TCTCCCGGCTCCAACTCC 60.684 66.667 0.00 0.00 0.00 3.85
3834 4412 4.148825 CTCCCGGCTCCAACTCCG 62.149 72.222 0.00 0.00 44.89 4.63
3837 4415 4.821589 CCGGCTCCAACTCCGCTC 62.822 72.222 0.00 0.00 44.01 5.03
3838 4416 3.764466 CGGCTCCAACTCCGCTCT 61.764 66.667 0.00 0.00 39.14 4.09
3839 4417 2.125350 GGCTCCAACTCCGCTCTG 60.125 66.667 0.00 0.00 0.00 3.35
3840 4418 2.125350 GCTCCAACTCCGCTCTGG 60.125 66.667 0.00 0.00 40.09 3.86
3860 4438 3.882025 CGGAGCAGCTTCCAGTTC 58.118 61.111 5.31 0.00 37.05 3.01
3861 4439 1.004560 CGGAGCAGCTTCCAGTTCA 60.005 57.895 5.31 0.00 37.05 3.18
3862 4440 0.603707 CGGAGCAGCTTCCAGTTCAA 60.604 55.000 5.31 0.00 37.05 2.69
3863 4441 1.609208 GGAGCAGCTTCCAGTTCAAA 58.391 50.000 0.00 0.00 37.20 2.69
3864 4442 2.165998 GGAGCAGCTTCCAGTTCAAAT 58.834 47.619 0.00 0.00 37.20 2.32
3865 4443 2.560105 GGAGCAGCTTCCAGTTCAAATT 59.440 45.455 0.00 0.00 37.20 1.82
3866 4444 3.006217 GGAGCAGCTTCCAGTTCAAATTT 59.994 43.478 0.00 0.00 37.20 1.82
3867 4445 4.502087 GGAGCAGCTTCCAGTTCAAATTTT 60.502 41.667 0.00 0.00 37.20 1.82
3868 4446 4.625028 AGCAGCTTCCAGTTCAAATTTTC 58.375 39.130 0.00 0.00 0.00 2.29
3869 4447 4.099881 AGCAGCTTCCAGTTCAAATTTTCA 59.900 37.500 0.00 0.00 0.00 2.69
3870 4448 4.446719 GCAGCTTCCAGTTCAAATTTTCAG 59.553 41.667 0.00 0.00 0.00 3.02
3871 4449 5.737063 GCAGCTTCCAGTTCAAATTTTCAGA 60.737 40.000 0.00 0.00 0.00 3.27
3872 4450 5.919141 CAGCTTCCAGTTCAAATTTTCAGAG 59.081 40.000 0.00 0.00 0.00 3.35
3873 4451 5.595952 AGCTTCCAGTTCAAATTTTCAGAGT 59.404 36.000 0.00 0.00 0.00 3.24
3874 4452 6.097412 AGCTTCCAGTTCAAATTTTCAGAGTT 59.903 34.615 0.00 0.00 0.00 3.01
3875 4453 6.199719 GCTTCCAGTTCAAATTTTCAGAGTTG 59.800 38.462 0.00 0.00 0.00 3.16
3876 4454 5.591099 TCCAGTTCAAATTTTCAGAGTTGC 58.409 37.500 0.00 0.00 0.00 4.17
3877 4455 5.360714 TCCAGTTCAAATTTTCAGAGTTGCT 59.639 36.000 0.00 0.00 0.00 3.91
3878 4456 5.461078 CCAGTTCAAATTTTCAGAGTTGCTG 59.539 40.000 0.00 0.00 46.31 4.41
3879 4457 5.461078 CAGTTCAAATTTTCAGAGTTGCTGG 59.539 40.000 0.00 0.00 44.98 4.85
3880 4458 5.360714 AGTTCAAATTTTCAGAGTTGCTGGA 59.639 36.000 0.00 0.00 44.98 3.86
3881 4459 5.443185 TCAAATTTTCAGAGTTGCTGGAG 57.557 39.130 0.00 0.00 44.98 3.86
3882 4460 4.279169 TCAAATTTTCAGAGTTGCTGGAGG 59.721 41.667 0.00 0.00 44.98 4.30
3883 4461 2.276732 TTTTCAGAGTTGCTGGAGGG 57.723 50.000 0.00 0.00 44.98 4.30
3884 4462 0.250901 TTTCAGAGTTGCTGGAGGGC 60.251 55.000 0.00 0.00 44.98 5.19
3885 4463 2.045536 CAGAGTTGCTGGAGGGCC 60.046 66.667 0.00 0.00 41.07 5.80
3886 4464 2.530151 AGAGTTGCTGGAGGGCCA 60.530 61.111 6.18 0.00 43.47 5.36
3887 4465 2.360475 GAGTTGCTGGAGGGCCAC 60.360 66.667 6.18 0.00 39.92 5.01
3888 4466 2.856000 AGTTGCTGGAGGGCCACT 60.856 61.111 6.18 0.00 39.92 4.00
3889 4467 2.360475 GTTGCTGGAGGGCCACTC 60.360 66.667 6.18 9.00 45.84 3.51
3924 4502 3.394836 GCTGAAGGAGCGGAGGGT 61.395 66.667 0.00 0.00 38.15 4.34
3925 4503 2.960688 GCTGAAGGAGCGGAGGGTT 61.961 63.158 0.00 0.00 38.15 4.11
3926 4504 1.078848 CTGAAGGAGCGGAGGGTTG 60.079 63.158 0.00 0.00 0.00 3.77
3927 4505 2.436824 GAAGGAGCGGAGGGTTGC 60.437 66.667 0.00 0.00 0.00 4.17
3928 4506 3.978571 GAAGGAGCGGAGGGTTGCC 62.979 68.421 0.00 0.00 0.00 4.52
3944 4522 3.227250 CCGAACGGGGCCTTAGAT 58.773 61.111 0.84 0.00 0.00 1.98
3945 4523 1.525442 CCGAACGGGGCCTTAGATT 59.475 57.895 0.84 0.00 0.00 2.40
3946 4524 0.532196 CCGAACGGGGCCTTAGATTC 60.532 60.000 0.84 0.00 0.00 2.52
3947 4525 0.177141 CGAACGGGGCCTTAGATTCA 59.823 55.000 0.84 0.00 0.00 2.57
3950 4528 1.345715 ACGGGGCCTTAGATTCAGGG 61.346 60.000 0.84 0.00 31.20 4.45
3962 4540 2.026822 AGATTCAGGGCACAACCACTAG 60.027 50.000 0.00 0.00 42.05 2.57
3988 4566 4.096984 GTCCTTGAGATGCATCGGATTTTT 59.903 41.667 20.67 1.24 31.65 1.94
3990 4568 5.528690 TCCTTGAGATGCATCGGATTTTTAG 59.471 40.000 20.67 10.30 0.00 1.85
4001 4579 9.352784 TGCATCGGATTTTTAGAAAGTAATTTG 57.647 29.630 0.00 0.00 0.00 2.32
4023 4601 6.540438 TGAAACTTCATAACTCCTCGGTAT 57.460 37.500 0.00 0.00 31.01 2.73
4024 4602 6.942976 TGAAACTTCATAACTCCTCGGTATT 58.057 36.000 0.00 0.00 31.01 1.89
4130 4708 5.744171 TCTAACTTGCATGATGTGGTACAT 58.256 37.500 6.60 0.00 44.52 2.29
4185 4763 6.938596 AGTACATGTTTACAAAGGGAACTACC 59.061 38.462 2.30 0.00 42.68 3.18
4186 4764 5.697067 ACATGTTTACAAAGGGAACTACCA 58.303 37.500 0.00 0.00 42.68 3.25
4211 4789 4.009675 GTGTGAATGATAAGCCAGACCAA 58.990 43.478 0.00 0.00 0.00 3.67
4215 4793 6.211184 TGTGAATGATAAGCCAGACCAATTTT 59.789 34.615 0.00 0.00 0.00 1.82
4217 4795 6.436847 TGAATGATAAGCCAGACCAATTTTGA 59.563 34.615 0.00 0.00 0.00 2.69
4272 4850 6.451064 AAAACAAGACCAACCTCTAAACAG 57.549 37.500 0.00 0.00 0.00 3.16
4273 4851 3.477530 ACAAGACCAACCTCTAAACAGC 58.522 45.455 0.00 0.00 0.00 4.40
4281 4859 3.971245 ACCTCTAAACAGCAGGAGAAG 57.029 47.619 0.00 0.00 0.00 2.85
4293 4871 4.999950 CAGCAGGAGAAGAAGTGTAAACAT 59.000 41.667 0.00 0.00 0.00 2.71
4299 4877 9.003658 CAGGAGAAGAAGTGTAAACATAATTGT 57.996 33.333 0.00 0.00 37.82 2.71
4327 4905 8.537858 TGGGGAAAAGATCTACTTTAGTTCTAC 58.462 37.037 0.00 0.00 46.55 2.59
4469 5061 4.610605 TGATACGTCACTTTGAAGGGAA 57.389 40.909 0.00 0.00 40.77 3.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.544724 TAGTGGCATTGGAAGGCAAC 58.455 50.000 0.00 0.00 43.50 4.17
1 2 2.530460 ATAGTGGCATTGGAAGGCAA 57.470 45.000 0.00 0.00 43.50 4.52
2 3 2.530460 AATAGTGGCATTGGAAGGCA 57.470 45.000 0.00 0.00 37.46 4.75
3 4 6.840780 ATATTAATAGTGGCATTGGAAGGC 57.159 37.500 1.02 0.00 34.45 4.35
7 8 8.792633 GCTGTTAATATTAATAGTGGCATTGGA 58.207 33.333 24.45 0.00 35.21 3.53
8 9 7.750458 CGCTGTTAATATTAATAGTGGCATTGG 59.250 37.037 25.99 7.34 38.15 3.16
9 10 8.503196 TCGCTGTTAATATTAATAGTGGCATTG 58.497 33.333 29.69 14.88 40.52 2.82
10 11 8.504005 GTCGCTGTTAATATTAATAGTGGCATT 58.496 33.333 29.79 0.00 42.62 3.56
11 12 7.148639 CGTCGCTGTTAATATTAATAGTGGCAT 60.149 37.037 31.68 0.00 42.97 4.40
12 13 6.144886 CGTCGCTGTTAATATTAATAGTGGCA 59.855 38.462 31.68 19.12 42.97 4.92
13 14 6.522761 CGTCGCTGTTAATATTAATAGTGGC 58.477 40.000 29.69 28.45 40.93 5.01
14 15 6.400727 GGCGTCGCTGTTAATATTAATAGTGG 60.401 42.308 29.69 21.27 40.52 4.00
15 16 6.144886 TGGCGTCGCTGTTAATATTAATAGTG 59.855 38.462 27.00 27.00 41.08 2.74
16 17 6.218019 TGGCGTCGCTGTTAATATTAATAGT 58.782 36.000 24.45 0.79 35.21 2.12
17 18 6.699895 TGGCGTCGCTGTTAATATTAATAG 57.300 37.500 21.45 21.45 35.67 1.73
18 19 7.661127 ATTGGCGTCGCTGTTAATATTAATA 57.339 32.000 18.11 7.72 0.00 0.98
19 20 5.994887 TTGGCGTCGCTGTTAATATTAAT 57.005 34.783 18.11 0.00 0.00 1.40
20 21 5.994887 ATTGGCGTCGCTGTTAATATTAA 57.005 34.783 18.11 3.71 0.00 1.40
21 22 5.294799 ACAATTGGCGTCGCTGTTAATATTA 59.705 36.000 18.11 0.00 0.00 0.98
22 23 4.095782 ACAATTGGCGTCGCTGTTAATATT 59.904 37.500 18.11 4.09 0.00 1.28
23 24 3.625764 ACAATTGGCGTCGCTGTTAATAT 59.374 39.130 18.11 3.37 0.00 1.28
24 25 3.004171 ACAATTGGCGTCGCTGTTAATA 58.996 40.909 18.11 0.00 0.00 0.98
25 26 1.810151 ACAATTGGCGTCGCTGTTAAT 59.190 42.857 18.11 9.92 0.00 1.40
26 27 1.231221 ACAATTGGCGTCGCTGTTAA 58.769 45.000 18.11 8.05 0.00 2.01
27 28 1.069568 CAACAATTGGCGTCGCTGTTA 60.070 47.619 18.52 3.52 0.00 2.41
28 29 0.317770 CAACAATTGGCGTCGCTGTT 60.318 50.000 18.11 16.10 0.00 3.16
29 30 1.282570 CAACAATTGGCGTCGCTGT 59.717 52.632 18.11 10.62 0.00 4.40
30 31 1.442520 CCAACAATTGGCGTCGCTG 60.443 57.895 18.11 9.92 45.17 5.18
31 32 2.953821 CCAACAATTGGCGTCGCT 59.046 55.556 18.11 0.00 45.17 4.93
50 51 3.758172 GTGACGTTGGCACCCAAT 58.242 55.556 0.00 0.00 45.80 3.16
55 56 3.030652 CCTTGGTGACGTTGGCAC 58.969 61.111 0.00 0.00 35.56 5.01
56 57 2.904866 GCCTTGGTGACGTTGGCA 60.905 61.111 6.50 0.00 40.66 4.92
57 58 3.670377 GGCCTTGGTGACGTTGGC 61.670 66.667 0.00 0.00 40.38 4.52
58 59 1.106944 AAAGGCCTTGGTGACGTTGG 61.107 55.000 21.33 0.00 0.00 3.77
59 60 0.744281 AAAAGGCCTTGGTGACGTTG 59.256 50.000 21.33 0.00 0.00 4.10
60 61 1.480789 AAAAAGGCCTTGGTGACGTT 58.519 45.000 21.33 4.40 0.00 3.99
61 62 3.200918 AAAAAGGCCTTGGTGACGT 57.799 47.368 21.33 0.00 0.00 4.34
76 77 1.944024 CTAGTGGTGACGTGGCAAAAA 59.056 47.619 0.00 0.00 0.00 1.94
77 78 1.134340 ACTAGTGGTGACGTGGCAAAA 60.134 47.619 0.00 0.00 0.00 2.44
78 79 0.466543 ACTAGTGGTGACGTGGCAAA 59.533 50.000 0.00 0.00 0.00 3.68
79 80 0.032952 GACTAGTGGTGACGTGGCAA 59.967 55.000 0.00 0.00 0.00 4.52
80 81 0.826256 AGACTAGTGGTGACGTGGCA 60.826 55.000 0.00 0.00 0.00 4.92
81 82 0.317479 AAGACTAGTGGTGACGTGGC 59.683 55.000 0.00 0.00 0.00 5.01
82 83 2.814280 AAAGACTAGTGGTGACGTGG 57.186 50.000 0.00 0.00 0.00 4.94
83 84 4.209288 CAGAAAAAGACTAGTGGTGACGTG 59.791 45.833 0.00 0.00 0.00 4.49
84 85 4.369182 CAGAAAAAGACTAGTGGTGACGT 58.631 43.478 0.00 0.00 0.00 4.34
85 86 3.184581 GCAGAAAAAGACTAGTGGTGACG 59.815 47.826 0.00 0.00 0.00 4.35
86 87 4.024809 GTGCAGAAAAAGACTAGTGGTGAC 60.025 45.833 0.00 0.00 0.00 3.67
87 88 4.127171 GTGCAGAAAAAGACTAGTGGTGA 58.873 43.478 0.00 0.00 0.00 4.02
88 89 4.130118 AGTGCAGAAAAAGACTAGTGGTG 58.870 43.478 0.00 0.00 0.00 4.17
89 90 4.423625 AGTGCAGAAAAAGACTAGTGGT 57.576 40.909 0.00 0.00 0.00 4.16
90 91 5.542779 ACTAGTGCAGAAAAAGACTAGTGG 58.457 41.667 0.00 0.00 45.97 4.00
93 94 6.459257 CACACTAGTGCAGAAAAAGACTAG 57.541 41.667 22.90 0.00 42.40 2.57
168 169 8.870075 ACATTAGCCTAGACTCAAAGATTTTT 57.130 30.769 0.00 0.00 0.00 1.94
169 170 8.870075 AACATTAGCCTAGACTCAAAGATTTT 57.130 30.769 0.00 0.00 0.00 1.82
170 171 8.870075 AAACATTAGCCTAGACTCAAAGATTT 57.130 30.769 0.00 0.00 0.00 2.17
171 172 8.870075 AAAACATTAGCCTAGACTCAAAGATT 57.130 30.769 0.00 0.00 0.00 2.40
172 173 8.870075 AAAAACATTAGCCTAGACTCAAAGAT 57.130 30.769 0.00 0.00 0.00 2.40
194 195 9.898152 ACCAATCCTTCACATTTTAAAGAAAAA 57.102 25.926 0.00 0.00 41.21 1.94
195 196 9.898152 AACCAATCCTTCACATTTTAAAGAAAA 57.102 25.926 0.00 0.00 38.87 2.29
196 197 9.541143 GAACCAATCCTTCACATTTTAAAGAAA 57.459 29.630 0.00 0.00 0.00 2.52
197 198 8.147704 GGAACCAATCCTTCACATTTTAAAGAA 58.852 33.333 0.00 0.00 45.56 2.52
198 199 7.666623 GGAACCAATCCTTCACATTTTAAAGA 58.333 34.615 0.00 0.00 45.56 2.52
199 200 7.889589 GGAACCAATCCTTCACATTTTAAAG 57.110 36.000 0.00 0.00 45.56 1.85
213 214 6.187727 TCTATGTTGGATAGGAACCAATCC 57.812 41.667 0.00 0.00 46.78 3.01
214 215 8.697507 ATTTCTATGTTGGATAGGAACCAATC 57.302 34.615 0.00 0.00 46.78 2.67
215 216 8.917088 CAATTTCTATGTTGGATAGGAACCAAT 58.083 33.333 0.00 0.00 46.78 3.16
216 217 7.341769 CCAATTTCTATGTTGGATAGGAACCAA 59.658 37.037 0.00 0.00 46.15 3.67
217 218 6.833416 CCAATTTCTATGTTGGATAGGAACCA 59.167 38.462 0.00 0.00 46.15 3.67
218 219 7.060421 TCCAATTTCTATGTTGGATAGGAACC 58.940 38.462 2.88 0.00 46.59 3.62
227 228 8.480501 AGAAATGGATTCCAATTTCTATGTTGG 58.519 33.333 25.50 0.00 44.92 3.77
230 231 9.699410 TGTAGAAATGGATTCCAATTTCTATGT 57.301 29.630 29.02 18.18 40.74 2.29
234 235 8.314021 GGTTTGTAGAAATGGATTCCAATTTCT 58.686 33.333 27.47 27.47 40.61 2.52
235 236 8.314021 AGGTTTGTAGAAATGGATTCCAATTTC 58.686 33.333 21.06 21.06 38.94 2.17
236 237 8.206126 AGGTTTGTAGAAATGGATTCCAATTT 57.794 30.769 9.98 10.52 38.94 1.82
237 238 7.797121 AGGTTTGTAGAAATGGATTCCAATT 57.203 32.000 9.98 7.70 38.94 2.32
238 239 8.893563 TTAGGTTTGTAGAAATGGATTCCAAT 57.106 30.769 9.98 0.00 38.94 3.16
239 240 7.396055 CCTTAGGTTTGTAGAAATGGATTCCAA 59.604 37.037 9.98 0.00 38.94 3.53
240 241 6.889722 CCTTAGGTTTGTAGAAATGGATTCCA 59.110 38.462 8.08 8.08 38.94 3.53
241 242 6.321435 CCCTTAGGTTTGTAGAAATGGATTCC 59.679 42.308 0.00 0.00 38.94 3.01
242 243 7.116736 TCCCTTAGGTTTGTAGAAATGGATTC 58.883 38.462 0.00 0.00 38.39 2.52
243 244 7.039722 TCCCTTAGGTTTGTAGAAATGGATT 57.960 36.000 0.00 0.00 0.00 3.01
244 245 6.652205 TCCCTTAGGTTTGTAGAAATGGAT 57.348 37.500 0.00 0.00 0.00 3.41
245 246 6.652205 ATCCCTTAGGTTTGTAGAAATGGA 57.348 37.500 0.00 0.00 0.00 3.41
246 247 6.889722 TGAATCCCTTAGGTTTGTAGAAATGG 59.110 38.462 0.00 0.00 0.00 3.16
247 248 7.938140 TGAATCCCTTAGGTTTGTAGAAATG 57.062 36.000 0.00 0.00 0.00 2.32
248 249 8.950007 TTTGAATCCCTTAGGTTTGTAGAAAT 57.050 30.769 0.00 0.00 0.00 2.17
249 250 8.221944 TCTTTGAATCCCTTAGGTTTGTAGAAA 58.778 33.333 0.00 0.00 0.00 2.52
250 251 7.751646 TCTTTGAATCCCTTAGGTTTGTAGAA 58.248 34.615 0.00 0.00 0.00 2.10
251 252 7.324388 TCTTTGAATCCCTTAGGTTTGTAGA 57.676 36.000 0.00 0.00 0.00 2.59
252 253 7.996098 TTCTTTGAATCCCTTAGGTTTGTAG 57.004 36.000 0.00 0.00 0.00 2.74
253 254 8.950007 AATTCTTTGAATCCCTTAGGTTTGTA 57.050 30.769 0.00 0.00 0.00 2.41
254 255 7.855784 AATTCTTTGAATCCCTTAGGTTTGT 57.144 32.000 0.00 0.00 0.00 2.83
255 256 9.559732 AAAAATTCTTTGAATCCCTTAGGTTTG 57.440 29.630 0.00 0.00 0.00 2.93
301 302 7.171848 TGGGAATAAATGTATGTGCGTGTATAC 59.828 37.037 0.00 0.00 0.00 1.47
302 303 7.217906 TGGGAATAAATGTATGTGCGTGTATA 58.782 34.615 0.00 0.00 0.00 1.47
303 304 6.058833 TGGGAATAAATGTATGTGCGTGTAT 58.941 36.000 0.00 0.00 0.00 2.29
304 305 5.429130 TGGGAATAAATGTATGTGCGTGTA 58.571 37.500 0.00 0.00 0.00 2.90
305 306 4.265893 TGGGAATAAATGTATGTGCGTGT 58.734 39.130 0.00 0.00 0.00 4.49
306 307 4.891627 TGGGAATAAATGTATGTGCGTG 57.108 40.909 0.00 0.00 0.00 5.34
307 308 5.129634 TCATGGGAATAAATGTATGTGCGT 58.870 37.500 0.00 0.00 0.00 5.24
308 309 5.687770 TCATGGGAATAAATGTATGTGCG 57.312 39.130 0.00 0.00 0.00 5.34
309 310 6.697019 GTGTTCATGGGAATAAATGTATGTGC 59.303 38.462 0.00 0.00 35.05 4.57
310 311 6.912051 CGTGTTCATGGGAATAAATGTATGTG 59.088 38.462 0.00 0.00 35.05 3.21
311 312 6.601613 ACGTGTTCATGGGAATAAATGTATGT 59.398 34.615 0.00 0.00 35.05 2.29
312 313 6.912051 CACGTGTTCATGGGAATAAATGTATG 59.088 38.462 7.58 0.00 35.05 2.39
313 314 6.459573 GCACGTGTTCATGGGAATAAATGTAT 60.460 38.462 18.38 0.00 35.05 2.29
314 315 5.163703 GCACGTGTTCATGGGAATAAATGTA 60.164 40.000 18.38 0.00 35.05 2.29
315 316 4.380444 GCACGTGTTCATGGGAATAAATGT 60.380 41.667 18.38 0.00 35.05 2.71
316 317 4.104776 GCACGTGTTCATGGGAATAAATG 58.895 43.478 18.38 0.00 35.05 2.32
317 318 3.761218 TGCACGTGTTCATGGGAATAAAT 59.239 39.130 18.38 0.00 35.05 1.40
318 319 3.149981 TGCACGTGTTCATGGGAATAAA 58.850 40.909 18.38 0.00 35.05 1.40
319 320 2.784347 TGCACGTGTTCATGGGAATAA 58.216 42.857 18.38 0.00 35.05 1.40
320 321 2.481289 TGCACGTGTTCATGGGAATA 57.519 45.000 18.38 0.00 35.05 1.75
321 322 1.473677 CATGCACGTGTTCATGGGAAT 59.526 47.619 21.61 0.00 37.13 3.01
322 323 0.880441 CATGCACGTGTTCATGGGAA 59.120 50.000 21.61 0.00 37.13 3.97
323 324 1.585267 GCATGCACGTGTTCATGGGA 61.585 55.000 26.89 1.43 40.16 4.37
324 325 1.153978 GCATGCACGTGTTCATGGG 60.154 57.895 26.89 11.58 40.16 4.00
325 326 0.730155 GTGCATGCACGTGTTCATGG 60.730 55.000 33.20 14.99 40.16 3.66
326 327 2.715758 GTGCATGCACGTGTTCATG 58.284 52.632 33.20 23.77 42.08 3.07
335 336 1.002134 AGGTAGGGTGTGCATGCAC 60.002 57.895 38.00 38.00 46.33 4.57
336 337 1.200760 AGAGGTAGGGTGTGCATGCA 61.201 55.000 18.46 18.46 0.00 3.96
337 338 0.830648 TAGAGGTAGGGTGTGCATGC 59.169 55.000 11.82 11.82 0.00 4.06
338 339 2.224378 CCATAGAGGTAGGGTGTGCATG 60.224 54.545 0.00 0.00 0.00 4.06
339 340 2.050144 CCATAGAGGTAGGGTGTGCAT 58.950 52.381 0.00 0.00 0.00 3.96
340 341 1.496060 CCATAGAGGTAGGGTGTGCA 58.504 55.000 0.00 0.00 0.00 4.57
341 342 0.759346 CCCATAGAGGTAGGGTGTGC 59.241 60.000 0.00 0.00 37.81 4.57
342 343 0.759346 GCCCATAGAGGTAGGGTGTG 59.241 60.000 0.00 0.00 44.69 3.82
343 344 0.341961 TGCCCATAGAGGTAGGGTGT 59.658 55.000 0.00 0.00 44.69 4.16
344 345 0.759346 GTGCCCATAGAGGTAGGGTG 59.241 60.000 0.00 0.00 44.69 4.61
345 346 0.400093 GGTGCCCATAGAGGTAGGGT 60.400 60.000 0.00 0.00 44.69 4.34
346 347 0.104934 AGGTGCCCATAGAGGTAGGG 60.105 60.000 0.00 0.00 45.68 3.53
347 348 1.133009 AGAGGTGCCCATAGAGGTAGG 60.133 57.143 0.00 0.00 34.66 3.18
348 349 1.967066 CAGAGGTGCCCATAGAGGTAG 59.033 57.143 0.00 0.00 34.66 3.18
349 350 1.573857 TCAGAGGTGCCCATAGAGGTA 59.426 52.381 0.00 0.00 34.66 3.08
350 351 0.339859 TCAGAGGTGCCCATAGAGGT 59.660 55.000 0.00 0.00 34.66 3.85
351 352 1.500474 TTCAGAGGTGCCCATAGAGG 58.500 55.000 0.00 0.00 37.03 3.69
352 353 3.853355 ATTTCAGAGGTGCCCATAGAG 57.147 47.619 0.00 0.00 0.00 2.43
353 354 3.391296 GGTATTTCAGAGGTGCCCATAGA 59.609 47.826 0.00 0.00 0.00 1.98
354 355 3.744660 GGTATTTCAGAGGTGCCCATAG 58.255 50.000 0.00 0.00 0.00 2.23
355 356 2.104111 CGGTATTTCAGAGGTGCCCATA 59.896 50.000 0.00 0.00 0.00 2.74
356 357 1.134098 CGGTATTTCAGAGGTGCCCAT 60.134 52.381 0.00 0.00 0.00 4.00
357 358 0.251916 CGGTATTTCAGAGGTGCCCA 59.748 55.000 0.00 0.00 0.00 5.36
358 359 0.539986 TCGGTATTTCAGAGGTGCCC 59.460 55.000 0.00 0.00 0.00 5.36
359 360 2.396590 TTCGGTATTTCAGAGGTGCC 57.603 50.000 0.00 0.00 0.00 5.01
360 361 3.071479 TGTTTCGGTATTTCAGAGGTGC 58.929 45.455 0.00 0.00 0.00 5.01
361 362 4.513692 TGTTGTTTCGGTATTTCAGAGGTG 59.486 41.667 0.00 0.00 0.00 4.00
362 363 4.514066 GTGTTGTTTCGGTATTTCAGAGGT 59.486 41.667 0.00 0.00 0.00 3.85
363 364 4.513692 TGTGTTGTTTCGGTATTTCAGAGG 59.486 41.667 0.00 0.00 0.00 3.69
364 365 5.666969 TGTGTTGTTTCGGTATTTCAGAG 57.333 39.130 0.00 0.00 0.00 3.35
365 366 5.502706 CGTTGTGTTGTTTCGGTATTTCAGA 60.503 40.000 0.00 0.00 0.00 3.27
366 367 4.668837 CGTTGTGTTGTTTCGGTATTTCAG 59.331 41.667 0.00 0.00 0.00 3.02
367 368 4.094590 ACGTTGTGTTGTTTCGGTATTTCA 59.905 37.500 0.00 0.00 0.00 2.69
368 369 4.590226 ACGTTGTGTTGTTTCGGTATTTC 58.410 39.130 0.00 0.00 0.00 2.17
369 370 4.333372 AGACGTTGTGTTGTTTCGGTATTT 59.667 37.500 0.00 0.00 0.00 1.40
370 371 3.872771 AGACGTTGTGTTGTTTCGGTATT 59.127 39.130 0.00 0.00 0.00 1.89
371 372 3.460103 AGACGTTGTGTTGTTTCGGTAT 58.540 40.909 0.00 0.00 0.00 2.73
372 373 2.891112 AGACGTTGTGTTGTTTCGGTA 58.109 42.857 0.00 0.00 0.00 4.02
373 374 1.729284 AGACGTTGTGTTGTTTCGGT 58.271 45.000 0.00 0.00 0.00 4.69
374 375 2.094575 TCAAGACGTTGTGTTGTTTCGG 59.905 45.455 6.70 0.00 37.90 4.30
375 376 3.061563 TCTCAAGACGTTGTGTTGTTTCG 59.938 43.478 6.70 0.00 37.90 3.46
376 377 4.593597 TCTCAAGACGTTGTGTTGTTTC 57.406 40.909 6.70 0.00 37.90 2.78
377 378 5.123186 TCAATCTCAAGACGTTGTGTTGTTT 59.877 36.000 6.70 0.00 37.90 2.83
378 379 4.634004 TCAATCTCAAGACGTTGTGTTGTT 59.366 37.500 6.70 0.00 37.90 2.83
379 380 4.034048 GTCAATCTCAAGACGTTGTGTTGT 59.966 41.667 6.70 0.00 37.90 3.32
380 381 4.033932 TGTCAATCTCAAGACGTTGTGTTG 59.966 41.667 0.00 0.79 38.01 3.33
381 382 4.188462 TGTCAATCTCAAGACGTTGTGTT 58.812 39.130 0.00 0.00 37.58 3.32
382 383 3.792401 TGTCAATCTCAAGACGTTGTGT 58.208 40.909 0.00 0.00 37.58 3.72
383 384 4.794248 TTGTCAATCTCAAGACGTTGTG 57.206 40.909 0.00 0.00 37.58 3.33
384 385 5.811399 TTTTGTCAATCTCAAGACGTTGT 57.189 34.783 0.00 0.00 37.58 3.32
404 405 5.581126 TCAAGATGTTGTGCTGACTTTTT 57.419 34.783 2.11 0.00 34.98 1.94
405 406 5.126061 ACTTCAAGATGTTGTGCTGACTTTT 59.874 36.000 2.11 0.00 34.98 2.27
406 407 4.641989 ACTTCAAGATGTTGTGCTGACTTT 59.358 37.500 2.11 0.00 34.98 2.66
407 408 4.202441 ACTTCAAGATGTTGTGCTGACTT 58.798 39.130 2.11 0.00 34.98 3.01
408 409 3.813443 ACTTCAAGATGTTGTGCTGACT 58.187 40.909 2.11 0.00 34.98 3.41
409 410 4.558538 AACTTCAAGATGTTGTGCTGAC 57.441 40.909 2.11 0.00 34.98 3.51
410 411 5.581126 AAAACTTCAAGATGTTGTGCTGA 57.419 34.783 2.11 0.00 34.98 4.26
435 436 5.656416 ACTTCAAGATGTTGTCCCTCAAAAA 59.344 36.000 2.11 0.00 37.81 1.94
436 437 5.200483 ACTTCAAGATGTTGTCCCTCAAAA 58.800 37.500 2.11 0.00 37.81 2.44
437 438 4.792068 ACTTCAAGATGTTGTCCCTCAAA 58.208 39.130 2.11 0.00 37.81 2.69
438 439 4.437682 ACTTCAAGATGTTGTCCCTCAA 57.562 40.909 2.11 0.00 34.98 3.02
439 440 4.136796 CAACTTCAAGATGTTGTCCCTCA 58.863 43.478 16.35 0.00 39.89 3.86
440 441 4.214332 GTCAACTTCAAGATGTTGTCCCTC 59.786 45.833 21.01 9.70 43.09 4.30
441 442 4.137543 GTCAACTTCAAGATGTTGTCCCT 58.862 43.478 21.01 0.00 43.09 4.20
442 443 3.882888 TGTCAACTTCAAGATGTTGTCCC 59.117 43.478 21.01 13.91 43.09 4.46
443 444 5.499139 TTGTCAACTTCAAGATGTTGTCC 57.501 39.130 21.01 15.56 43.09 4.02
444 445 6.555315 ACTTTGTCAACTTCAAGATGTTGTC 58.445 36.000 21.01 17.67 43.09 3.18
448 449 5.220931 GCTGACTTTGTCAACTTCAAGATGT 60.221 40.000 0.00 0.00 42.26 3.06
479 480 5.008019 GTGTCTGATTTTGTCAAGCTCAAGA 59.992 40.000 0.00 0.00 36.14 3.02
480 481 5.210715 GTGTCTGATTTTGTCAAGCTCAAG 58.789 41.667 0.00 0.00 36.14 3.02
486 487 4.273480 ACGAAGGTGTCTGATTTTGTCAAG 59.727 41.667 0.00 0.00 36.14 3.02
489 490 4.989168 ACTACGAAGGTGTCTGATTTTGTC 59.011 41.667 0.00 0.00 0.00 3.18
495 496 2.708051 TCGACTACGAAGGTGTCTGAT 58.292 47.619 0.00 0.00 45.74 2.90
522 528 4.572909 TGTGTGTTCAATGAGAGGAGATG 58.427 43.478 0.00 0.00 0.00 2.90
523 529 4.897509 TGTGTGTTCAATGAGAGGAGAT 57.102 40.909 0.00 0.00 0.00 2.75
527 533 7.323420 TCTAACTATGTGTGTTCAATGAGAGG 58.677 38.462 0.00 0.00 0.00 3.69
528 534 8.763049 TTCTAACTATGTGTGTTCAATGAGAG 57.237 34.615 0.00 0.00 0.00 3.20
561 569 5.752955 CGGTGGTCATGTTTTTCTGAATTTT 59.247 36.000 0.00 0.00 0.00 1.82
569 577 1.001745 GCGCGGTGGTCATGTTTTTC 61.002 55.000 8.83 0.00 0.00 2.29
576 584 4.329545 ACTTGGCGCGGTGGTCAT 62.330 61.111 8.83 0.00 0.00 3.06
586 594 1.737793 GGGTTTGTCATAGACTTGGCG 59.262 52.381 0.00 0.00 33.15 5.69
621 629 2.203422 TTGGGGTTTCCTGTGGCG 60.203 61.111 0.00 0.00 36.20 5.69
623 631 0.178935 ATGGTTGGGGTTTCCTGTGG 60.179 55.000 0.00 0.00 36.20 4.17
670 694 2.410785 TGTCGTTGACGTACTCTTGG 57.589 50.000 3.25 0.00 40.80 3.61
672 696 5.556355 TGATATGTCGTTGACGTACTCTT 57.444 39.130 3.25 0.00 36.95 2.85
720 744 8.545420 CGCAGAGTACTTAAACTTCTTGTAAAA 58.455 33.333 0.00 0.00 0.00 1.52
742 766 3.842820 TCATTTGAGTCTCTCTTCGCAG 58.157 45.455 0.65 0.00 0.00 5.18
746 770 6.045955 GGGTGTATCATTTGAGTCTCTCTTC 58.954 44.000 0.65 0.00 0.00 2.87
747 771 5.485353 TGGGTGTATCATTTGAGTCTCTCTT 59.515 40.000 0.65 0.00 0.00 2.85
748 772 5.026121 TGGGTGTATCATTTGAGTCTCTCT 58.974 41.667 0.65 0.00 0.00 3.10
749 773 5.112686 GTGGGTGTATCATTTGAGTCTCTC 58.887 45.833 0.65 0.00 0.00 3.20
750 774 4.532126 TGTGGGTGTATCATTTGAGTCTCT 59.468 41.667 0.65 0.00 0.00 3.10
781 813 4.490799 GCTTCAGCTTTGTTTGTTTTGTCG 60.491 41.667 0.00 0.00 38.21 4.35
783 815 4.152223 GTGCTTCAGCTTTGTTTGTTTTGT 59.848 37.500 0.00 0.00 42.66 2.83
798 830 0.179020 TCCCACTGTTGGTGCTTCAG 60.179 55.000 0.00 0.00 44.08 3.02
799 831 0.478072 ATCCCACTGTTGGTGCTTCA 59.522 50.000 0.00 0.00 44.08 3.02
800 832 1.168714 GATCCCACTGTTGGTGCTTC 58.831 55.000 0.00 0.00 44.08 3.86
802 834 1.003355 CGATCCCACTGTTGGTGCT 60.003 57.895 0.00 0.00 44.08 4.40
803 835 0.605319 TTCGATCCCACTGTTGGTGC 60.605 55.000 0.00 0.00 44.08 5.01
829 899 4.595538 TCACTGTTCCCGCGCGTT 62.596 61.111 29.95 0.06 0.00 4.84
849 919 7.013750 TCTGTGTTACAGGCAATGTGAAATTTA 59.986 33.333 8.91 0.00 45.94 1.40
868 947 1.279271 GGCCCATCTGTACTCTGTGTT 59.721 52.381 0.00 0.00 0.00 3.32
869 948 0.905357 GGCCCATCTGTACTCTGTGT 59.095 55.000 0.00 0.00 0.00 3.72
870 949 0.179000 GGGCCCATCTGTACTCTGTG 59.821 60.000 19.95 0.00 0.00 3.66
871 950 0.043334 AGGGCCCATCTGTACTCTGT 59.957 55.000 27.56 0.00 0.00 3.41
872 951 1.207791 AAGGGCCCATCTGTACTCTG 58.792 55.000 27.56 0.00 0.00 3.35
873 952 1.840635 GAAAGGGCCCATCTGTACTCT 59.159 52.381 27.56 0.00 0.00 3.24
874 953 1.559682 TGAAAGGGCCCATCTGTACTC 59.440 52.381 27.56 5.79 0.00 2.59
875 954 1.561542 CTGAAAGGGCCCATCTGTACT 59.438 52.381 27.56 0.00 0.00 2.73
876 955 1.282157 ACTGAAAGGGCCCATCTGTAC 59.718 52.381 27.75 13.01 39.30 2.90
877 956 1.668826 ACTGAAAGGGCCCATCTGTA 58.331 50.000 27.75 10.75 39.30 2.74
900 979 5.573669 CGTAGACTTTCTACTGGCTTTTCTC 59.426 44.000 10.78 0.00 45.38 2.87
901 980 5.243283 TCGTAGACTTTCTACTGGCTTTTCT 59.757 40.000 10.78 0.00 45.38 2.52
902 981 5.467705 TCGTAGACTTTCTACTGGCTTTTC 58.532 41.667 10.78 0.00 45.38 2.29
903 982 5.464030 TCGTAGACTTTCTACTGGCTTTT 57.536 39.130 10.78 0.00 45.38 2.27
966 1121 1.737236 GTGCGTGTGGAATTATGCTCA 59.263 47.619 0.00 0.00 0.00 4.26
972 1127 1.376166 CGGGGTGCGTGTGGAATTA 60.376 57.895 0.00 0.00 0.00 1.40
975 1130 4.612412 GACGGGGTGCGTGTGGAA 62.612 66.667 0.00 0.00 0.00 3.53
1000 1160 1.380785 CCAGCAAGCCCATGGTCAT 60.381 57.895 11.73 0.00 0.00 3.06
1132 1292 1.971505 ATGATGACGGTGGCGGACAT 61.972 55.000 0.00 0.00 0.00 3.06
1167 1327 3.970640 AGAGGTTGAGGTTGAAGAAGAGT 59.029 43.478 0.00 0.00 0.00 3.24
1657 1859 0.952280 GGCTGATGATGAGGCACATG 59.048 55.000 1.04 0.00 39.56 3.21
1659 1861 1.153309 CGGCTGATGATGAGGCACA 60.153 57.895 6.26 0.00 35.77 4.57
1660 1862 2.541120 GCGGCTGATGATGAGGCAC 61.541 63.158 6.26 0.00 35.77 5.01
1669 1883 3.877357 CTGCTGCAGCGGCTGATG 61.877 66.667 33.24 22.84 45.83 3.07
1726 1940 2.202440 CGCGTACCGACACCTCTG 60.202 66.667 0.00 0.00 40.02 3.35
1785 1999 1.372997 ACTTGTGACGCTGTAGCCG 60.373 57.895 0.00 0.00 37.91 5.52
1799 2013 1.577328 GGCGGTGGTGATGTCACTTG 61.577 60.000 12.43 2.62 45.73 3.16
1801 2015 2.347490 GGCGGTGGTGATGTCACT 59.653 61.111 12.43 0.00 45.73 3.41
2103 2346 2.169352 CTCGTCCTTCATCACCTGGAAT 59.831 50.000 0.00 0.00 0.00 3.01
2241 2484 2.831366 GCCGCAGAGGACGACGATA 61.831 63.158 0.00 0.00 45.00 2.92
2326 2569 2.124403 GCACCTGGCCATCCTGAG 60.124 66.667 5.51 0.00 36.11 3.35
2727 2979 3.438297 AGCGACGTTGCTGATAGTAAT 57.562 42.857 29.30 1.69 45.28 1.89
2728 2980 2.933495 AGCGACGTTGCTGATAGTAA 57.067 45.000 29.30 0.00 45.28 2.24
2972 3224 1.039233 TACCAGGTAGGCGCAGTACC 61.039 60.000 24.02 24.02 43.14 3.34
3126 3378 0.681887 TGATCTGCTCGTACCCGGAA 60.682 55.000 0.73 0.00 33.95 4.30
3261 3513 3.402681 CACATCCCCTCCACGCCT 61.403 66.667 0.00 0.00 0.00 5.52
3488 4066 4.267928 GCACCTACATCATCTACAACGAAC 59.732 45.833 0.00 0.00 0.00 3.95
3516 4094 3.692576 ACTGATACGTACAGCGCTTAAG 58.307 45.455 7.50 8.97 46.11 1.85
3524 4102 4.795268 ACACAACTGACTGATACGTACAG 58.205 43.478 17.89 17.89 40.68 2.74
3604 4182 7.288810 TCAAGAAACAGAGCAAATTAACCAT 57.711 32.000 0.00 0.00 0.00 3.55
3637 4215 1.218316 GGGCGTTGTCCTAGTCAGG 59.782 63.158 0.00 0.00 44.17 3.86
3655 4233 1.240641 TGCCCCTGTAACAACGCATG 61.241 55.000 0.00 0.00 0.00 4.06
3717 4295 4.664319 TTCCAAGGTAGCATGGATTCCCA 61.664 47.826 18.75 1.77 44.83 4.37
3718 4296 1.494721 TCCAAGGTAGCATGGATTCCC 59.505 52.381 14.59 0.00 40.74 3.97
3719 4297 3.297134 TTCCAAGGTAGCATGGATTCC 57.703 47.619 18.75 0.00 44.83 3.01
3728 4306 3.438360 CGCATTCATTTTCCAAGGTAGC 58.562 45.455 0.00 0.00 0.00 3.58
3736 4314 4.567959 CAGAATTTCCCGCATTCATTTTCC 59.432 41.667 0.00 0.00 33.67 3.13
3749 4327 5.335976 GGTTGTGACAGAATCAGAATTTCCC 60.336 44.000 0.00 0.00 42.18 3.97
3778 4356 6.476053 GCTCTAAGTAGTAGTACACAATTGCC 59.524 42.308 5.05 0.00 0.00 4.52
3779 4357 6.476053 GGCTCTAAGTAGTAGTACACAATTGC 59.524 42.308 5.05 6.75 0.00 3.56
3792 4370 2.100989 CCCGAACAGGCTCTAAGTAGT 58.899 52.381 0.00 0.00 39.21 2.73
3803 4381 2.726351 GGGAGAGAGCCCGAACAGG 61.726 68.421 0.00 0.00 38.58 4.00
3812 4390 3.077556 TTGGAGCCGGGAGAGAGC 61.078 66.667 2.18 0.00 0.00 4.09
3813 4391 1.671901 GAGTTGGAGCCGGGAGAGAG 61.672 65.000 2.18 0.00 0.00 3.20
3814 4392 1.682684 GAGTTGGAGCCGGGAGAGA 60.683 63.158 2.18 0.00 0.00 3.10
3815 4393 2.726351 GGAGTTGGAGCCGGGAGAG 61.726 68.421 2.18 0.00 0.00 3.20
3816 4394 2.683933 GGAGTTGGAGCCGGGAGA 60.684 66.667 2.18 0.00 0.00 3.71
3817 4395 4.148825 CGGAGTTGGAGCCGGGAG 62.149 72.222 2.18 0.00 43.67 4.30
3822 4400 2.125350 CAGAGCGGAGTTGGAGCC 60.125 66.667 0.00 0.00 0.00 4.70
3823 4401 2.125350 CCAGAGCGGAGTTGGAGC 60.125 66.667 0.00 0.00 36.56 4.70
3824 4402 3.700109 TCCAGAGCGGAGTTGGAG 58.300 61.111 0.00 0.00 39.64 3.86
3835 4413 2.904470 GAAGCTGCTCCGCTCCAGAG 62.904 65.000 1.00 0.00 39.86 3.35
3836 4414 2.999648 AAGCTGCTCCGCTCCAGA 61.000 61.111 1.00 0.00 39.86 3.86
3837 4415 2.511145 GAAGCTGCTCCGCTCCAG 60.511 66.667 1.00 0.00 39.86 3.86
3838 4416 4.087892 GGAAGCTGCTCCGCTCCA 62.088 66.667 12.15 0.00 39.86 3.86
3839 4417 4.087892 TGGAAGCTGCTCCGCTCC 62.088 66.667 1.00 6.91 39.86 4.70
3840 4418 2.511145 CTGGAAGCTGCTCCGCTC 60.511 66.667 1.00 0.00 39.86 5.03
3841 4419 2.794820 GAACTGGAAGCTGCTCCGCT 62.795 60.000 1.00 0.00 43.31 5.52
3842 4420 2.359230 AACTGGAAGCTGCTCCGC 60.359 61.111 1.00 0.00 38.44 5.54
3843 4421 0.603707 TTGAACTGGAAGCTGCTCCG 60.604 55.000 1.00 5.70 38.44 4.63
3844 4422 1.609208 TTTGAACTGGAAGCTGCTCC 58.391 50.000 1.00 6.90 37.60 4.70
3845 4423 3.930634 AATTTGAACTGGAAGCTGCTC 57.069 42.857 1.00 0.00 37.60 4.26
3846 4424 4.099881 TGAAAATTTGAACTGGAAGCTGCT 59.900 37.500 0.00 0.00 37.60 4.24
3847 4425 4.370917 TGAAAATTTGAACTGGAAGCTGC 58.629 39.130 0.00 0.00 37.60 5.25
3848 4426 5.835257 TCTGAAAATTTGAACTGGAAGCTG 58.165 37.500 0.00 0.00 37.60 4.24
3849 4427 5.595952 ACTCTGAAAATTTGAACTGGAAGCT 59.404 36.000 0.00 0.00 37.60 3.74
3850 4428 5.836347 ACTCTGAAAATTTGAACTGGAAGC 58.164 37.500 0.00 0.00 37.60 3.86
3851 4429 6.199719 GCAACTCTGAAAATTTGAACTGGAAG 59.800 38.462 0.00 0.00 42.29 3.46
3852 4430 6.042143 GCAACTCTGAAAATTTGAACTGGAA 58.958 36.000 0.00 0.00 0.00 3.53
3853 4431 5.360714 AGCAACTCTGAAAATTTGAACTGGA 59.639 36.000 0.00 0.00 0.00 3.86
3854 4432 5.461078 CAGCAACTCTGAAAATTTGAACTGG 59.539 40.000 0.00 0.00 45.72 4.00
3855 4433 5.461078 CCAGCAACTCTGAAAATTTGAACTG 59.539 40.000 0.00 0.00 45.72 3.16
3856 4434 5.360714 TCCAGCAACTCTGAAAATTTGAACT 59.639 36.000 0.00 0.00 45.72 3.01
3857 4435 5.591099 TCCAGCAACTCTGAAAATTTGAAC 58.409 37.500 0.00 0.00 45.72 3.18
3858 4436 5.221303 CCTCCAGCAACTCTGAAAATTTGAA 60.221 40.000 0.00 0.00 45.72 2.69
3859 4437 4.279169 CCTCCAGCAACTCTGAAAATTTGA 59.721 41.667 0.00 0.00 45.72 2.69
3860 4438 4.553323 CCTCCAGCAACTCTGAAAATTTG 58.447 43.478 0.00 0.00 45.72 2.32
3861 4439 3.575687 CCCTCCAGCAACTCTGAAAATTT 59.424 43.478 0.00 0.00 45.72 1.82
3862 4440 3.160269 CCCTCCAGCAACTCTGAAAATT 58.840 45.455 0.00 0.00 45.72 1.82
3863 4441 2.800250 CCCTCCAGCAACTCTGAAAAT 58.200 47.619 0.00 0.00 45.72 1.82
3864 4442 1.819305 GCCCTCCAGCAACTCTGAAAA 60.819 52.381 0.00 0.00 45.72 2.29
3865 4443 0.250901 GCCCTCCAGCAACTCTGAAA 60.251 55.000 0.00 0.00 45.72 2.69
3866 4444 1.376466 GCCCTCCAGCAACTCTGAA 59.624 57.895 0.00 0.00 45.72 3.02
3867 4445 2.596851 GGCCCTCCAGCAACTCTGA 61.597 63.158 0.00 0.00 45.72 3.27
3868 4446 2.045536 GGCCCTCCAGCAACTCTG 60.046 66.667 0.00 0.00 42.49 3.35
3869 4447 2.530151 TGGCCCTCCAGCAACTCT 60.530 61.111 0.00 0.00 37.47 3.24
3870 4448 2.360475 GTGGCCCTCCAGCAACTC 60.360 66.667 0.00 0.00 44.48 3.01
3871 4449 2.856000 AGTGGCCCTCCAGCAACT 60.856 61.111 0.00 0.00 44.48 3.16
3872 4450 2.360475 GAGTGGCCCTCCAGCAAC 60.360 66.667 0.00 0.00 44.48 4.17
3907 4485 2.960688 AACCCTCCGCTCCTTCAGC 61.961 63.158 0.00 0.00 45.85 4.26
3908 4486 1.078848 CAACCCTCCGCTCCTTCAG 60.079 63.158 0.00 0.00 0.00 3.02
3909 4487 3.068881 CAACCCTCCGCTCCTTCA 58.931 61.111 0.00 0.00 0.00 3.02
3910 4488 2.436824 GCAACCCTCCGCTCCTTC 60.437 66.667 0.00 0.00 0.00 3.46
3911 4489 4.035102 GGCAACCCTCCGCTCCTT 62.035 66.667 0.00 0.00 0.00 3.36
3914 4492 4.388499 TTCGGCAACCCTCCGCTC 62.388 66.667 0.00 0.00 46.05 5.03
3915 4493 4.699522 GTTCGGCAACCCTCCGCT 62.700 66.667 0.00 0.00 46.05 5.52
3927 4505 0.532196 GAATCTAAGGCCCCGTTCGG 60.532 60.000 0.00 4.08 0.00 4.30
3928 4506 0.177141 TGAATCTAAGGCCCCGTTCG 59.823 55.000 0.00 0.00 0.00 3.95
3929 4507 1.475213 CCTGAATCTAAGGCCCCGTTC 60.475 57.143 0.00 0.00 0.00 3.95
3930 4508 0.546598 CCTGAATCTAAGGCCCCGTT 59.453 55.000 0.00 0.00 0.00 4.44
3931 4509 1.345715 CCCTGAATCTAAGGCCCCGT 61.346 60.000 0.00 0.00 33.07 5.28
3932 4510 1.451936 CCCTGAATCTAAGGCCCCG 59.548 63.158 0.00 0.00 33.07 5.73
3933 4511 1.151679 GCCCTGAATCTAAGGCCCC 59.848 63.158 0.00 0.00 39.60 5.80
3934 4512 0.466372 GTGCCCTGAATCTAAGGCCC 60.466 60.000 0.00 0.00 45.14 5.80
3935 4513 0.255890 TGTGCCCTGAATCTAAGGCC 59.744 55.000 0.00 0.00 45.14 5.19
3936 4514 1.745653 GTTGTGCCCTGAATCTAAGGC 59.254 52.381 0.00 0.00 45.96 4.35
3937 4515 2.290896 TGGTTGTGCCCTGAATCTAAGG 60.291 50.000 0.00 0.00 36.04 2.69
3938 4516 2.749621 GTGGTTGTGCCCTGAATCTAAG 59.250 50.000 0.00 0.00 36.04 2.18
3939 4517 2.375174 AGTGGTTGTGCCCTGAATCTAA 59.625 45.455 0.00 0.00 36.04 2.10
3940 4518 1.985159 AGTGGTTGTGCCCTGAATCTA 59.015 47.619 0.00 0.00 36.04 1.98
3941 4519 0.773644 AGTGGTTGTGCCCTGAATCT 59.226 50.000 0.00 0.00 36.04 2.40
3942 4520 2.359900 CTAGTGGTTGTGCCCTGAATC 58.640 52.381 0.00 0.00 36.04 2.52
3943 4521 1.614317 GCTAGTGGTTGTGCCCTGAAT 60.614 52.381 0.00 0.00 36.04 2.57
3944 4522 0.250727 GCTAGTGGTTGTGCCCTGAA 60.251 55.000 0.00 0.00 36.04 3.02
3945 4523 1.127567 AGCTAGTGGTTGTGCCCTGA 61.128 55.000 0.00 0.00 36.04 3.86
3946 4524 0.957395 CAGCTAGTGGTTGTGCCCTG 60.957 60.000 0.00 0.00 36.04 4.45
3947 4525 1.376466 CAGCTAGTGGTTGTGCCCT 59.624 57.895 0.00 0.00 36.04 5.19
3950 4528 0.035458 AGGACAGCTAGTGGTTGTGC 59.965 55.000 6.87 6.87 44.92 4.57
3962 4540 0.935898 CGATGCATCTCAAGGACAGC 59.064 55.000 23.73 0.00 0.00 4.40
4001 4579 8.937634 TTAATACCGAGGAGTTATGAAGTTTC 57.062 34.615 0.00 0.00 0.00 2.78
4047 4625 8.250332 GCAAGGGTGATTTCACTTATTTTGATA 58.750 33.333 10.32 0.00 45.73 2.15
4049 4627 6.267471 AGCAAGGGTGATTTCACTTATTTTGA 59.733 34.615 10.32 0.00 45.73 2.69
4064 4642 1.305465 TAGGCCGTAGCAAGGGTGA 60.305 57.895 0.00 0.00 42.56 4.02
4073 4651 7.210873 AGAAATAAGAAATCACTAGGCCGTAG 58.789 38.462 0.00 2.16 34.52 3.51
4076 4654 8.608844 AATAGAAATAAGAAATCACTAGGCCG 57.391 34.615 0.00 0.00 0.00 6.13
4185 4763 4.093998 GTCTGGCTTATCATTCACACTGTG 59.906 45.833 6.19 6.19 34.45 3.66
4186 4764 4.256920 GTCTGGCTTATCATTCACACTGT 58.743 43.478 0.00 0.00 0.00 3.55
4243 4821 6.256643 AGAGGTTGGTCTTGTTTTACCTTA 57.743 37.500 0.00 0.00 36.20 2.69
4256 4834 2.038557 TCCTGCTGTTTAGAGGTTGGTC 59.961 50.000 0.00 0.00 0.00 4.02
4272 4850 7.617041 ATTATGTTTACACTTCTTCTCCTGC 57.383 36.000 0.00 0.00 0.00 4.85
4273 4851 9.003658 ACAATTATGTTTACACTTCTTCTCCTG 57.996 33.333 0.00 0.00 35.91 3.86
4293 4871 8.950007 AAGTAGATCTTTTCCCCAAACAATTA 57.050 30.769 0.00 0.00 31.57 1.40
4299 4877 8.445588 AGAACTAAAGTAGATCTTTTCCCCAAA 58.554 33.333 0.00 0.00 42.95 3.28
4402 4994 4.473477 ACTACTAGGCACCATGACTTTC 57.527 45.455 0.00 0.00 36.80 2.62
4405 4997 5.068215 AGATACTACTAGGCACCATGACT 57.932 43.478 0.00 0.00 40.22 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.