Multiple sequence alignment - TraesCS7A01G173600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G173600 chr7A 100.000 2824 0 0 1 2824 127908395 127905572 0.000000e+00 5216.0
1 TraesCS7A01G173600 chr7A 95.116 778 29 4 940 1709 128153878 128154654 0.000000e+00 1218.0
2 TraesCS7A01G173600 chr7A 81.767 532 68 20 1066 1596 24928083 24928586 4.350000e-113 418.0
3 TraesCS7A01G173600 chr7A 77.371 464 74 11 171 609 25934518 25934975 2.170000e-61 246.0
4 TraesCS7A01G173600 chr7B 89.714 1400 97 25 1022 2410 88880498 88879135 0.000000e+00 1744.0
5 TraesCS7A01G173600 chr7B 90.518 1023 70 13 871 1887 89208558 89209559 0.000000e+00 1327.0
6 TraesCS7A01G173600 chr7B 92.647 408 19 6 2428 2824 88879148 88878741 6.780000e-161 577.0
7 TraesCS7A01G173600 chr7B 77.340 406 59 20 2440 2822 45268520 45268125 2.850000e-50 209.0
8 TraesCS7A01G173600 chr7B 75.746 268 46 17 2562 2822 136390089 136390344 1.780000e-22 117.0
9 TraesCS7A01G173600 chr7D 93.913 920 41 10 1911 2824 127280666 127279756 0.000000e+00 1375.0
10 TraesCS7A01G173600 chr7D 89.692 1038 63 19 871 1887 127420830 127421844 0.000000e+00 1284.0
11 TraesCS7A01G173600 chr7D 81.105 561 76 18 1066 1623 24427824 24428357 3.360000e-114 422.0
12 TraesCS7A01G173600 chr7D 100.000 41 0 0 1883 1923 127431985 127432025 3.020000e-10 76.8
13 TraesCS7A01G173600 chr6B 84.225 374 46 7 158 525 130327242 130326876 4.480000e-93 351.0
14 TraesCS7A01G173600 chr6B 81.794 379 46 13 158 529 278279684 278279322 2.130000e-76 296.0
15 TraesCS7A01G173600 chr6B 81.181 271 40 9 261 524 43512406 43512140 1.030000e-49 207.0
16 TraesCS7A01G173600 chr6B 79.298 285 49 9 251 528 43388416 43388135 1.030000e-44 191.0
17 TraesCS7A01G173600 chr6B 80.228 263 45 6 268 525 712555626 712555366 1.030000e-44 191.0
18 TraesCS7A01G173600 chr6B 79.330 179 21 14 2559 2734 665741729 665741564 8.270000e-21 111.0
19 TraesCS7A01G173600 chr6B 84.146 82 12 1 535 615 130326846 130326765 8.390000e-11 78.7
20 TraesCS7A01G173600 chr6A 79.218 486 60 18 158 616 557140372 557140843 1.640000e-77 300.0
21 TraesCS7A01G173600 chr6A 84.884 86 8 5 532 615 25540046 25539964 6.480000e-12 82.4
22 TraesCS7A01G173600 chr1D 78.112 498 80 12 136 611 472000321 471999831 3.560000e-74 289.0
23 TraesCS7A01G173600 chr1D 76.601 406 63 26 2441 2822 250957081 250956684 7.980000e-46 195.0
24 TraesCS7A01G173600 chr3D 79.699 399 56 19 2441 2822 547459089 547459479 6.000000e-67 265.0
25 TraesCS7A01G173600 chr4B 80.328 366 56 10 171 529 588908695 588909051 2.160000e-66 263.0
26 TraesCS7A01G173600 chr3A 78.174 449 65 17 194 616 11837216 11836775 3.610000e-64 255.0
27 TraesCS7A01G173600 chr3A 78.552 373 60 10 176 539 382350261 382349900 7.870000e-56 228.0
28 TraesCS7A01G173600 chr2B 77.919 471 58 20 176 616 102907118 102906664 4.670000e-63 252.0
29 TraesCS7A01G173600 chr2B 80.220 182 19 16 2562 2732 58872453 58872278 1.370000e-23 121.0
30 TraesCS7A01G173600 chr1B 75.723 519 85 22 134 621 61963423 61963931 3.660000e-54 222.0
31 TraesCS7A01G173600 chr1A 75.388 451 78 17 171 596 41831907 41831465 1.340000e-43 187.0
32 TraesCS7A01G173600 chrUn 81.111 180 19 10 2562 2739 262550235 262550069 2.280000e-26 130.0
33 TraesCS7A01G173600 chr6D 85.366 82 11 1 535 615 58097614 58097533 1.800000e-12 84.2
34 TraesCS7A01G173600 chr5B 73.448 290 50 16 232 515 656911620 656911352 1.800000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G173600 chr7A 127905572 127908395 2823 True 5216.0 5216 100.0000 1 2824 1 chr7A.!!$R1 2823
1 TraesCS7A01G173600 chr7A 128153878 128154654 776 False 1218.0 1218 95.1160 940 1709 1 chr7A.!!$F3 769
2 TraesCS7A01G173600 chr7A 24928083 24928586 503 False 418.0 418 81.7670 1066 1596 1 chr7A.!!$F1 530
3 TraesCS7A01G173600 chr7B 89208558 89209559 1001 False 1327.0 1327 90.5180 871 1887 1 chr7B.!!$F1 1016
4 TraesCS7A01G173600 chr7B 88878741 88880498 1757 True 1160.5 1744 91.1805 1022 2824 2 chr7B.!!$R2 1802
5 TraesCS7A01G173600 chr7D 127279756 127280666 910 True 1375.0 1375 93.9130 1911 2824 1 chr7D.!!$R1 913
6 TraesCS7A01G173600 chr7D 127420830 127421844 1014 False 1284.0 1284 89.6920 871 1887 1 chr7D.!!$F2 1016
7 TraesCS7A01G173600 chr7D 24427824 24428357 533 False 422.0 422 81.1050 1066 1623 1 chr7D.!!$F1 557
8 TraesCS7A01G173600 chr1B 61963423 61963931 508 False 222.0 222 75.7230 134 621 1 chr1B.!!$F1 487

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
244 245 0.031857 CAATTTCGCACAAGGGCACA 59.968 50.0 0.0 0.0 0.0 4.57 F
909 935 0.034756 TGGATCGGGATAACATGGCG 59.965 55.0 0.0 0.0 0.0 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1750 1807 0.181114 ACACAGCAGAAGCAGAACCA 59.819 50.0 0.00 0.0 45.49 3.67 R
2428 2510 0.472471 GGAATTCCTCCGGTATGCCA 59.528 55.0 17.73 0.0 29.57 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.668632 GCCCAAGTCGGACATGGA 59.331 61.111 28.71 0.00 39.18 3.41
18 19 1.002624 GCCCAAGTCGGACATGGAA 60.003 57.895 28.71 0.00 39.18 3.53
19 20 1.026718 GCCCAAGTCGGACATGGAAG 61.027 60.000 28.71 16.47 39.18 3.46
20 21 0.392998 CCCAAGTCGGACATGGAAGG 60.393 60.000 28.71 12.18 39.18 3.46
21 22 0.613260 CCAAGTCGGACATGGAAGGA 59.387 55.000 24.25 0.00 39.18 3.36
22 23 1.406069 CCAAGTCGGACATGGAAGGAG 60.406 57.143 24.25 0.00 39.18 3.69
23 24 0.250513 AAGTCGGACATGGAAGGAGC 59.749 55.000 11.27 0.00 0.00 4.70
24 25 1.519455 GTCGGACATGGAAGGAGCG 60.519 63.158 2.62 0.00 0.00 5.03
25 26 1.680989 TCGGACATGGAAGGAGCGA 60.681 57.895 0.00 0.00 0.00 4.93
26 27 1.043116 TCGGACATGGAAGGAGCGAT 61.043 55.000 0.00 0.00 0.00 4.58
27 28 0.877649 CGGACATGGAAGGAGCGATG 60.878 60.000 0.00 0.00 0.00 3.84
28 29 1.162800 GGACATGGAAGGAGCGATGC 61.163 60.000 0.00 0.00 0.00 3.91
29 30 1.493950 GACATGGAAGGAGCGATGCG 61.494 60.000 0.00 0.00 0.00 4.73
45 46 3.118454 CGCGCGTGTGGGAAGATT 61.118 61.111 24.19 0.00 0.00 2.40
46 47 2.480555 GCGCGTGTGGGAAGATTG 59.519 61.111 8.43 0.00 0.00 2.67
47 48 2.032634 GCGCGTGTGGGAAGATTGA 61.033 57.895 8.43 0.00 0.00 2.57
48 49 1.369091 GCGCGTGTGGGAAGATTGAT 61.369 55.000 8.43 0.00 0.00 2.57
49 50 1.934589 CGCGTGTGGGAAGATTGATA 58.065 50.000 0.00 0.00 0.00 2.15
50 51 2.483876 CGCGTGTGGGAAGATTGATAT 58.516 47.619 0.00 0.00 0.00 1.63
51 52 2.476619 CGCGTGTGGGAAGATTGATATC 59.523 50.000 0.00 0.00 0.00 1.63
52 53 3.733337 GCGTGTGGGAAGATTGATATCT 58.267 45.455 3.98 0.00 43.01 1.98
53 54 4.558697 CGCGTGTGGGAAGATTGATATCTA 60.559 45.833 3.98 0.00 40.26 1.98
54 55 5.482908 GCGTGTGGGAAGATTGATATCTAT 58.517 41.667 3.98 1.33 40.26 1.98
55 56 6.625081 CGCGTGTGGGAAGATTGATATCTATA 60.625 42.308 3.98 0.00 40.26 1.31
56 57 7.097192 GCGTGTGGGAAGATTGATATCTATAA 58.903 38.462 3.98 0.00 40.26 0.98
57 58 7.766278 GCGTGTGGGAAGATTGATATCTATAAT 59.234 37.037 3.98 0.00 40.26 1.28
78 79 6.964807 AATATAGAAGGCATTCATGTTGCA 57.035 33.333 14.34 0.00 41.95 4.08
79 80 7.534723 AATATAGAAGGCATTCATGTTGCAT 57.465 32.000 14.34 13.14 41.95 3.96
80 81 3.520290 AGAAGGCATTCATGTTGCATG 57.480 42.857 14.34 2.93 41.95 4.06
81 82 1.931172 GAAGGCATTCATGTTGCATGC 59.069 47.619 11.82 11.82 44.36 4.06
82 83 1.191535 AGGCATTCATGTTGCATGCT 58.808 45.000 20.33 0.00 44.47 3.79
83 84 1.553248 AGGCATTCATGTTGCATGCTT 59.447 42.857 20.33 11.28 44.47 3.91
84 85 1.663643 GGCATTCATGTTGCATGCTTG 59.336 47.619 20.33 11.19 44.47 4.01
85 86 1.062002 GCATTCATGTTGCATGCTTGC 59.938 47.619 20.33 17.19 42.37 4.01
97 98 3.306917 CATGCTTGCATGGTGAAAGAA 57.693 42.857 23.42 0.00 34.90 2.52
98 99 3.655486 CATGCTTGCATGGTGAAAGAAA 58.345 40.909 23.42 0.00 34.90 2.52
99 100 4.250464 CATGCTTGCATGGTGAAAGAAAT 58.750 39.130 23.42 0.00 34.90 2.17
100 101 5.412640 CATGCTTGCATGGTGAAAGAAATA 58.587 37.500 23.42 0.00 34.90 1.40
101 102 4.808558 TGCTTGCATGGTGAAAGAAATAC 58.191 39.130 1.85 0.00 34.90 1.89
102 103 3.853671 GCTTGCATGGTGAAAGAAATACG 59.146 43.478 1.85 0.00 34.90 3.06
103 104 4.414852 CTTGCATGGTGAAAGAAATACGG 58.585 43.478 0.00 0.00 34.90 4.02
104 105 3.417101 TGCATGGTGAAAGAAATACGGT 58.583 40.909 0.00 0.00 0.00 4.83
105 106 4.580868 TGCATGGTGAAAGAAATACGGTA 58.419 39.130 0.00 0.00 0.00 4.02
106 107 4.634004 TGCATGGTGAAAGAAATACGGTAG 59.366 41.667 0.00 0.00 0.00 3.18
107 108 4.634443 GCATGGTGAAAGAAATACGGTAGT 59.366 41.667 0.00 0.00 0.00 2.73
108 109 5.447279 GCATGGTGAAAGAAATACGGTAGTG 60.447 44.000 0.00 0.00 0.00 2.74
109 110 5.471556 TGGTGAAAGAAATACGGTAGTGA 57.528 39.130 0.00 0.00 0.00 3.41
110 111 5.475719 TGGTGAAAGAAATACGGTAGTGAG 58.524 41.667 0.00 0.00 0.00 3.51
111 112 4.868734 GGTGAAAGAAATACGGTAGTGAGG 59.131 45.833 0.00 0.00 0.00 3.86
112 113 4.868734 GTGAAAGAAATACGGTAGTGAGGG 59.131 45.833 0.00 0.00 0.00 4.30
113 114 3.538634 AAGAAATACGGTAGTGAGGGC 57.461 47.619 0.00 0.00 0.00 5.19
114 115 2.463752 AGAAATACGGTAGTGAGGGCA 58.536 47.619 0.00 0.00 0.00 5.36
115 116 2.431057 AGAAATACGGTAGTGAGGGCAG 59.569 50.000 0.00 0.00 0.00 4.85
116 117 0.464452 AATACGGTAGTGAGGGCAGC 59.536 55.000 0.00 0.00 0.00 5.25
117 118 0.397254 ATACGGTAGTGAGGGCAGCT 60.397 55.000 0.00 0.00 0.00 4.24
118 119 0.256752 TACGGTAGTGAGGGCAGCTA 59.743 55.000 0.00 0.00 0.00 3.32
119 120 0.397254 ACGGTAGTGAGGGCAGCTAT 60.397 55.000 0.00 0.00 0.00 2.97
120 121 0.753262 CGGTAGTGAGGGCAGCTATT 59.247 55.000 0.00 0.00 0.00 1.73
121 122 1.139058 CGGTAGTGAGGGCAGCTATTT 59.861 52.381 0.00 0.00 0.00 1.40
122 123 2.420129 CGGTAGTGAGGGCAGCTATTTT 60.420 50.000 0.00 0.00 0.00 1.82
123 124 3.621558 GGTAGTGAGGGCAGCTATTTTT 58.378 45.455 0.00 0.00 0.00 1.94
124 125 3.628032 GGTAGTGAGGGCAGCTATTTTTC 59.372 47.826 0.00 0.00 0.00 2.29
125 126 2.728007 AGTGAGGGCAGCTATTTTTCC 58.272 47.619 0.00 0.00 0.00 3.13
126 127 2.041620 AGTGAGGGCAGCTATTTTTCCA 59.958 45.455 0.00 0.00 0.00 3.53
127 128 3.026694 GTGAGGGCAGCTATTTTTCCAT 58.973 45.455 0.00 0.00 0.00 3.41
128 129 3.448660 GTGAGGGCAGCTATTTTTCCATT 59.551 43.478 0.00 0.00 0.00 3.16
129 130 4.081476 GTGAGGGCAGCTATTTTTCCATTT 60.081 41.667 0.00 0.00 0.00 2.32
130 131 5.127031 GTGAGGGCAGCTATTTTTCCATTTA 59.873 40.000 0.00 0.00 0.00 1.40
131 132 5.360714 TGAGGGCAGCTATTTTTCCATTTAG 59.639 40.000 0.00 0.00 0.00 1.85
132 133 5.518865 AGGGCAGCTATTTTTCCATTTAGA 58.481 37.500 0.00 0.00 0.00 2.10
149 150 7.568199 CATTTAGATACGGAAATGGAAAGGT 57.432 36.000 0.00 0.00 38.72 3.50
153 154 0.958822 ACGGAAATGGAAAGGTGCAC 59.041 50.000 8.80 8.80 0.00 4.57
154 155 0.958091 CGGAAATGGAAAGGTGCACA 59.042 50.000 20.43 0.00 0.00 4.57
155 156 1.335872 CGGAAATGGAAAGGTGCACAC 60.336 52.381 20.43 8.23 0.00 3.82
156 157 1.963515 GGAAATGGAAAGGTGCACACT 59.036 47.619 20.43 10.61 0.00 3.55
173 174 2.025155 CACTAGTGCGGGAGTAGTCAT 58.975 52.381 10.54 0.00 38.57 3.06
182 183 1.834263 GGGAGTAGTCATCTGCCAAGT 59.166 52.381 0.00 0.00 41.89 3.16
190 191 3.984193 ATCTGCCAAGTCCTGCCGC 62.984 63.158 0.00 0.00 0.00 6.53
206 207 4.103103 GCCCGCTCGTTTTGCCTC 62.103 66.667 0.00 0.00 0.00 4.70
208 209 3.041940 CCGCTCGTTTTGCCTCGT 61.042 61.111 0.00 0.00 0.00 4.18
214 215 2.069273 CTCGTTTTGCCTCGTGATTCT 58.931 47.619 0.00 0.00 0.00 2.40
216 217 1.128692 CGTTTTGCCTCGTGATTCTCC 59.871 52.381 0.00 0.00 0.00 3.71
217 218 2.427506 GTTTTGCCTCGTGATTCTCCT 58.572 47.619 0.00 0.00 0.00 3.69
222 223 3.215151 TGCCTCGTGATTCTCCTAGTAG 58.785 50.000 0.00 0.00 0.00 2.57
225 226 4.261280 GCCTCGTGATTCTCCTAGTAGTTC 60.261 50.000 0.00 0.00 0.00 3.01
229 230 7.406031 TCGTGATTCTCCTAGTAGTTCAATT 57.594 36.000 0.00 0.00 0.00 2.32
230 231 7.837863 TCGTGATTCTCCTAGTAGTTCAATTT 58.162 34.615 0.00 0.00 0.00 1.82
231 232 7.974501 TCGTGATTCTCCTAGTAGTTCAATTTC 59.025 37.037 0.00 0.00 0.00 2.17
233 234 6.757010 TGATTCTCCTAGTAGTTCAATTTCGC 59.243 38.462 0.00 0.00 0.00 4.70
234 235 5.654603 TCTCCTAGTAGTTCAATTTCGCA 57.345 39.130 0.00 0.00 0.00 5.10
236 237 5.047590 TCTCCTAGTAGTTCAATTTCGCACA 60.048 40.000 0.00 0.00 0.00 4.57
243 244 0.313672 TCAATTTCGCACAAGGGCAC 59.686 50.000 0.00 0.00 0.00 5.01
244 245 0.031857 CAATTTCGCACAAGGGCACA 59.968 50.000 0.00 0.00 0.00 4.57
245 246 0.749649 AATTTCGCACAAGGGCACAA 59.250 45.000 0.00 0.00 0.00 3.33
306 307 7.922505 TCAATGATGAAACTTACGGTTTTTG 57.077 32.000 0.00 0.00 46.77 2.44
307 308 7.708051 TCAATGATGAAACTTACGGTTTTTGA 58.292 30.769 0.00 0.00 46.77 2.69
322 323 7.608974 CGGTTTTTGAATCTAAAACTGTCAG 57.391 36.000 23.85 0.00 42.64 3.51
323 324 6.636850 CGGTTTTTGAATCTAAAACTGTCAGG 59.363 38.462 23.85 9.93 42.64 3.86
426 430 5.693104 TCGCTCGTACTAAGTTTCAACATTT 59.307 36.000 0.00 0.00 0.00 2.32
429 433 8.166706 CGCTCGTACTAAGTTTCAACATTTAAT 58.833 33.333 0.00 0.00 0.00 1.40
430 434 9.821662 GCTCGTACTAAGTTTCAACATTTAATT 57.178 29.630 0.00 0.00 0.00 1.40
487 493 7.517321 TCAAAATGGATTTTATTTGAAAGCGC 58.483 30.769 0.00 0.00 38.45 5.92
495 501 1.317613 ATTTGAAAGCGCTGGTCACA 58.682 45.000 20.42 15.80 0.00 3.58
497 503 0.662619 TTGAAAGCGCTGGTCACAAG 59.337 50.000 20.42 0.00 0.00 3.16
501 507 1.609208 AAGCGCTGGTCACAAGAAAT 58.391 45.000 12.58 0.00 0.00 2.17
563 589 6.480524 AAATCGGAAGCCAAAATAAAAAGC 57.519 33.333 0.00 0.00 0.00 3.51
569 595 4.290711 AGCCAAAATAAAAAGCAGGCAT 57.709 36.364 0.00 0.00 42.90 4.40
570 596 4.256110 AGCCAAAATAAAAAGCAGGCATC 58.744 39.130 0.00 0.00 42.90 3.91
574 600 5.481105 CAAAATAAAAAGCAGGCATCAGGA 58.519 37.500 0.00 0.00 0.00 3.86
577 603 1.999648 AAAAGCAGGCATCAGGAACA 58.000 45.000 0.00 0.00 0.00 3.18
580 606 1.035932 AGCAGGCATCAGGAACATGC 61.036 55.000 0.00 4.72 45.13 4.06
587 613 0.757935 ATCAGGAACATGCATGCCCC 60.758 55.000 26.53 24.61 0.00 5.80
612 638 3.935203 CACTTGCGTATCACAAATCCTCT 59.065 43.478 0.00 0.00 0.00 3.69
613 639 4.033358 CACTTGCGTATCACAAATCCTCTC 59.967 45.833 0.00 0.00 0.00 3.20
614 640 3.179443 TGCGTATCACAAATCCTCTCC 57.821 47.619 0.00 0.00 0.00 3.71
615 641 2.158957 TGCGTATCACAAATCCTCTCCC 60.159 50.000 0.00 0.00 0.00 4.30
616 642 2.158957 GCGTATCACAAATCCTCTCCCA 60.159 50.000 0.00 0.00 0.00 4.37
617 643 3.495100 GCGTATCACAAATCCTCTCCCAT 60.495 47.826 0.00 0.00 0.00 4.00
618 644 4.708177 CGTATCACAAATCCTCTCCCATT 58.292 43.478 0.00 0.00 0.00 3.16
619 645 5.126067 CGTATCACAAATCCTCTCCCATTT 58.874 41.667 0.00 0.00 0.00 2.32
620 646 6.288294 CGTATCACAAATCCTCTCCCATTTA 58.712 40.000 0.00 0.00 0.00 1.40
621 647 6.425114 CGTATCACAAATCCTCTCCCATTTAG 59.575 42.308 0.00 0.00 0.00 1.85
622 648 6.581388 ATCACAAATCCTCTCCCATTTAGA 57.419 37.500 0.00 0.00 0.00 2.10
623 649 6.581388 TCACAAATCCTCTCCCATTTAGAT 57.419 37.500 0.00 0.00 0.00 1.98
624 650 7.690454 TCACAAATCCTCTCCCATTTAGATA 57.310 36.000 0.00 0.00 0.00 1.98
625 651 8.280258 TCACAAATCCTCTCCCATTTAGATAT 57.720 34.615 0.00 0.00 0.00 1.63
626 652 8.159447 TCACAAATCCTCTCCCATTTAGATATG 58.841 37.037 0.00 0.00 0.00 1.78
627 653 7.392673 CACAAATCCTCTCCCATTTAGATATGG 59.607 40.741 0.00 0.00 43.90 2.74
628 654 7.295672 ACAAATCCTCTCCCATTTAGATATGGA 59.704 37.037 4.26 0.00 46.63 3.41
629 655 7.895144 AATCCTCTCCCATTTAGATATGGAA 57.105 36.000 4.26 0.00 46.63 3.53
630 656 6.942163 TCCTCTCCCATTTAGATATGGAAG 57.058 41.667 4.26 0.00 46.63 3.46
631 657 6.634041 TCCTCTCCCATTTAGATATGGAAGA 58.366 40.000 4.26 0.00 46.63 2.87
632 658 7.259391 TCCTCTCCCATTTAGATATGGAAGAT 58.741 38.462 4.26 0.00 46.63 2.40
633 659 7.741288 TCCTCTCCCATTTAGATATGGAAGATT 59.259 37.037 4.26 0.00 46.63 2.40
634 660 8.389366 CCTCTCCCATTTAGATATGGAAGATTT 58.611 37.037 4.26 0.00 46.63 2.17
652 678 9.521503 GGAAGATTTATGTCTGATTTTTAAGGC 57.478 33.333 0.00 0.00 0.00 4.35
653 679 9.226345 GAAGATTTATGTCTGATTTTTAAGGCG 57.774 33.333 0.00 0.00 0.00 5.52
654 680 7.196331 AGATTTATGTCTGATTTTTAAGGCGC 58.804 34.615 0.00 0.00 0.00 6.53
655 681 5.888691 TTATGTCTGATTTTTAAGGCGCA 57.111 34.783 10.83 0.00 0.00 6.09
656 682 4.782019 ATGTCTGATTTTTAAGGCGCAA 57.218 36.364 10.83 0.00 0.00 4.85
657 683 4.782019 TGTCTGATTTTTAAGGCGCAAT 57.218 36.364 10.83 0.00 0.00 3.56
658 684 5.888691 TGTCTGATTTTTAAGGCGCAATA 57.111 34.783 10.83 0.00 0.00 1.90
659 685 6.449635 TGTCTGATTTTTAAGGCGCAATAT 57.550 33.333 10.83 0.00 0.00 1.28
660 686 7.561021 TGTCTGATTTTTAAGGCGCAATATA 57.439 32.000 10.83 0.00 0.00 0.86
661 687 7.414436 TGTCTGATTTTTAAGGCGCAATATAC 58.586 34.615 10.83 0.00 0.00 1.47
662 688 7.282224 TGTCTGATTTTTAAGGCGCAATATACT 59.718 33.333 10.83 0.00 0.00 2.12
663 689 7.587757 GTCTGATTTTTAAGGCGCAATATACTG 59.412 37.037 10.83 0.00 0.00 2.74
664 690 7.282224 TCTGATTTTTAAGGCGCAATATACTGT 59.718 33.333 10.83 0.00 0.00 3.55
665 691 7.192913 TGATTTTTAAGGCGCAATATACTGTG 58.807 34.615 10.83 0.00 0.00 3.66
666 692 6.745159 TTTTTAAGGCGCAATATACTGTGA 57.255 33.333 10.83 0.00 0.00 3.58
667 693 6.935741 TTTTAAGGCGCAATATACTGTGAT 57.064 33.333 10.83 0.00 0.00 3.06
668 694 5.922739 TTAAGGCGCAATATACTGTGATG 57.077 39.130 10.83 0.00 0.00 3.07
669 695 3.475566 AGGCGCAATATACTGTGATGT 57.524 42.857 10.83 0.00 0.00 3.06
670 696 4.600692 AGGCGCAATATACTGTGATGTA 57.399 40.909 10.83 0.00 0.00 2.29
671 697 4.307432 AGGCGCAATATACTGTGATGTAC 58.693 43.478 10.83 0.00 0.00 2.90
672 698 4.039245 AGGCGCAATATACTGTGATGTACT 59.961 41.667 10.83 0.00 0.00 2.73
673 699 4.386049 GGCGCAATATACTGTGATGTACTC 59.614 45.833 10.83 0.00 0.00 2.59
674 700 4.386049 GCGCAATATACTGTGATGTACTCC 59.614 45.833 0.30 0.00 0.00 3.85
675 701 5.773575 CGCAATATACTGTGATGTACTCCT 58.226 41.667 0.00 0.00 0.00 3.69
676 702 6.569801 GCGCAATATACTGTGATGTACTCCTA 60.570 42.308 0.30 0.00 0.00 2.94
677 703 7.539436 CGCAATATACTGTGATGTACTCCTAT 58.461 38.462 0.00 0.00 0.00 2.57
678 704 7.486232 CGCAATATACTGTGATGTACTCCTATG 59.514 40.741 0.00 0.00 0.00 2.23
679 705 7.276658 GCAATATACTGTGATGTACTCCTATGC 59.723 40.741 0.00 0.00 0.00 3.14
680 706 8.526978 CAATATACTGTGATGTACTCCTATGCT 58.473 37.037 0.00 0.00 0.00 3.79
681 707 6.985653 ATACTGTGATGTACTCCTATGCTT 57.014 37.500 0.00 0.00 0.00 3.91
682 708 9.755122 ATATACTGTGATGTACTCCTATGCTTA 57.245 33.333 0.00 0.00 0.00 3.09
683 709 6.985653 ACTGTGATGTACTCCTATGCTTAT 57.014 37.500 0.00 0.00 0.00 1.73
684 710 6.987386 ACTGTGATGTACTCCTATGCTTATC 58.013 40.000 0.00 0.00 0.00 1.75
685 711 6.551227 ACTGTGATGTACTCCTATGCTTATCA 59.449 38.462 0.00 0.00 0.00 2.15
686 712 7.069950 ACTGTGATGTACTCCTATGCTTATCAA 59.930 37.037 0.00 0.00 0.00 2.57
687 713 7.210174 TGTGATGTACTCCTATGCTTATCAAC 58.790 38.462 0.00 0.00 0.00 3.18
688 714 7.147742 TGTGATGTACTCCTATGCTTATCAACA 60.148 37.037 0.00 0.00 0.00 3.33
689 715 7.710907 GTGATGTACTCCTATGCTTATCAACAA 59.289 37.037 0.00 0.00 0.00 2.83
690 716 7.928167 TGATGTACTCCTATGCTTATCAACAAG 59.072 37.037 0.00 0.00 0.00 3.16
691 717 7.182817 TGTACTCCTATGCTTATCAACAAGT 57.817 36.000 0.00 0.00 0.00 3.16
692 718 7.620880 TGTACTCCTATGCTTATCAACAAGTT 58.379 34.615 0.00 0.00 0.00 2.66
693 719 8.755028 TGTACTCCTATGCTTATCAACAAGTTA 58.245 33.333 0.00 0.00 0.00 2.24
694 720 9.765795 GTACTCCTATGCTTATCAACAAGTTAT 57.234 33.333 0.00 0.00 0.00 1.89
696 722 9.988815 ACTCCTATGCTTATCAACAAGTTATAG 57.011 33.333 0.00 0.00 31.62 1.31
697 723 9.429359 CTCCTATGCTTATCAACAAGTTATAGG 57.571 37.037 15.05 15.05 40.99 2.57
698 724 9.154632 TCCTATGCTTATCAACAAGTTATAGGA 57.845 33.333 17.51 17.51 43.01 2.94
699 725 9.778741 CCTATGCTTATCAACAAGTTATAGGAA 57.221 33.333 15.62 0.00 41.47 3.36
703 729 9.290988 TGCTTATCAACAAGTTATAGGAAAACA 57.709 29.630 0.00 0.00 0.00 2.83
719 745 7.823745 AGGAAAACAAGTTATGATGTTGTCT 57.176 32.000 8.29 0.00 41.48 3.41
720 746 7.651808 AGGAAAACAAGTTATGATGTTGTCTG 58.348 34.615 8.29 0.00 41.48 3.51
721 747 7.502226 AGGAAAACAAGTTATGATGTTGTCTGA 59.498 33.333 8.29 0.00 41.48 3.27
722 748 8.134895 GGAAAACAAGTTATGATGTTGTCTGAA 58.865 33.333 8.29 0.00 41.48 3.02
723 749 9.683069 GAAAACAAGTTATGATGTTGTCTGAAT 57.317 29.630 2.38 0.00 39.58 2.57
724 750 9.467258 AAAACAAGTTATGATGTTGTCTGAATG 57.533 29.630 0.00 0.00 39.57 2.67
725 751 7.750229 ACAAGTTATGATGTTGTCTGAATGT 57.250 32.000 0.00 0.00 27.96 2.71
726 752 8.169977 ACAAGTTATGATGTTGTCTGAATGTT 57.830 30.769 0.00 0.00 27.96 2.71
727 753 8.632679 ACAAGTTATGATGTTGTCTGAATGTTT 58.367 29.630 0.00 0.00 27.96 2.83
728 754 8.908678 CAAGTTATGATGTTGTCTGAATGTTTG 58.091 33.333 0.00 0.00 0.00 2.93
729 755 8.394971 AGTTATGATGTTGTCTGAATGTTTGA 57.605 30.769 0.00 0.00 0.00 2.69
730 756 8.509690 AGTTATGATGTTGTCTGAATGTTTGAG 58.490 33.333 0.00 0.00 0.00 3.02
731 757 8.506437 GTTATGATGTTGTCTGAATGTTTGAGA 58.494 33.333 0.00 0.00 0.00 3.27
732 758 6.304356 TGATGTTGTCTGAATGTTTGAGAC 57.696 37.500 0.64 0.64 37.27 3.36
733 759 6.057533 TGATGTTGTCTGAATGTTTGAGACT 58.942 36.000 8.05 0.00 37.58 3.24
734 760 6.543465 TGATGTTGTCTGAATGTTTGAGACTT 59.457 34.615 8.05 0.00 37.58 3.01
735 761 6.122850 TGTTGTCTGAATGTTTGAGACTTG 57.877 37.500 8.05 0.00 37.58 3.16
736 762 5.879777 TGTTGTCTGAATGTTTGAGACTTGA 59.120 36.000 8.05 0.00 37.58 3.02
737 763 6.543465 TGTTGTCTGAATGTTTGAGACTTGAT 59.457 34.615 8.05 0.00 37.58 2.57
738 764 6.549912 TGTCTGAATGTTTGAGACTTGATG 57.450 37.500 8.05 0.00 37.58 3.07
739 765 6.057533 TGTCTGAATGTTTGAGACTTGATGT 58.942 36.000 8.05 0.00 37.58 3.06
740 766 6.017687 TGTCTGAATGTTTGAGACTTGATGTG 60.018 38.462 8.05 0.00 37.58 3.21
741 767 5.049198 TCTGAATGTTTGAGACTTGATGTGC 60.049 40.000 0.00 0.00 0.00 4.57
742 768 4.823442 TGAATGTTTGAGACTTGATGTGCT 59.177 37.500 0.00 0.00 0.00 4.40
743 769 5.049198 TGAATGTTTGAGACTTGATGTGCTC 60.049 40.000 0.00 0.00 0.00 4.26
744 770 3.141398 TGTTTGAGACTTGATGTGCTCC 58.859 45.455 0.00 0.00 0.00 4.70
745 771 3.181451 TGTTTGAGACTTGATGTGCTCCT 60.181 43.478 0.00 0.00 0.00 3.69
746 772 4.040339 TGTTTGAGACTTGATGTGCTCCTA 59.960 41.667 0.00 0.00 0.00 2.94
747 773 5.181748 GTTTGAGACTTGATGTGCTCCTAT 58.818 41.667 0.00 0.00 0.00 2.57
748 774 5.426689 TTGAGACTTGATGTGCTCCTATT 57.573 39.130 0.00 0.00 0.00 1.73
749 775 4.763073 TGAGACTTGATGTGCTCCTATTG 58.237 43.478 0.00 0.00 0.00 1.90
750 776 3.539604 AGACTTGATGTGCTCCTATTGC 58.460 45.455 0.00 0.00 0.00 3.56
751 777 3.199508 AGACTTGATGTGCTCCTATTGCT 59.800 43.478 0.00 0.00 0.00 3.91
752 778 3.539604 ACTTGATGTGCTCCTATTGCTC 58.460 45.455 0.00 0.00 0.00 4.26
753 779 3.054875 ACTTGATGTGCTCCTATTGCTCA 60.055 43.478 0.00 0.00 38.11 4.26
754 780 3.851458 TGATGTGCTCCTATTGCTCAT 57.149 42.857 0.00 0.00 44.09 2.90
755 781 4.160642 TGATGTGCTCCTATTGCTCATT 57.839 40.909 0.00 0.00 42.32 2.57
756 782 4.529897 TGATGTGCTCCTATTGCTCATTT 58.470 39.130 0.00 0.00 42.32 2.32
757 783 4.951715 TGATGTGCTCCTATTGCTCATTTT 59.048 37.500 0.00 0.00 42.32 1.82
758 784 4.970662 TGTGCTCCTATTGCTCATTTTC 57.029 40.909 0.00 0.00 0.00 2.29
759 785 4.592942 TGTGCTCCTATTGCTCATTTTCT 58.407 39.130 0.00 0.00 0.00 2.52
760 786 5.744171 TGTGCTCCTATTGCTCATTTTCTA 58.256 37.500 0.00 0.00 0.00 2.10
761 787 5.586243 TGTGCTCCTATTGCTCATTTTCTAC 59.414 40.000 0.00 0.00 0.00 2.59
762 788 5.008118 GTGCTCCTATTGCTCATTTTCTACC 59.992 44.000 0.00 0.00 0.00 3.18
763 789 5.126067 GCTCCTATTGCTCATTTTCTACCA 58.874 41.667 0.00 0.00 0.00 3.25
764 790 5.008118 GCTCCTATTGCTCATTTTCTACCAC 59.992 44.000 0.00 0.00 0.00 4.16
765 791 5.437060 TCCTATTGCTCATTTTCTACCACC 58.563 41.667 0.00 0.00 0.00 4.61
766 792 4.273480 CCTATTGCTCATTTTCTACCACCG 59.727 45.833 0.00 0.00 0.00 4.94
767 793 2.107950 TGCTCATTTTCTACCACCGG 57.892 50.000 0.00 0.00 0.00 5.28
768 794 0.733150 GCTCATTTTCTACCACCGGC 59.267 55.000 0.00 0.00 0.00 6.13
769 795 1.006832 CTCATTTTCTACCACCGGCG 58.993 55.000 0.00 0.00 0.00 6.46
770 796 0.609151 TCATTTTCTACCACCGGCGA 59.391 50.000 9.30 0.00 0.00 5.54
771 797 1.002201 TCATTTTCTACCACCGGCGAA 59.998 47.619 9.30 0.00 0.00 4.70
772 798 2.014128 CATTTTCTACCACCGGCGAAT 58.986 47.619 9.30 0.00 0.00 3.34
773 799 3.118702 TCATTTTCTACCACCGGCGAATA 60.119 43.478 9.30 0.00 0.00 1.75
774 800 2.298411 TTTCTACCACCGGCGAATAC 57.702 50.000 9.30 0.00 0.00 1.89
775 801 1.184431 TTCTACCACCGGCGAATACA 58.816 50.000 9.30 0.00 0.00 2.29
776 802 1.405872 TCTACCACCGGCGAATACAT 58.594 50.000 9.30 0.00 0.00 2.29
777 803 1.758280 TCTACCACCGGCGAATACATT 59.242 47.619 9.30 0.00 0.00 2.71
778 804 1.864711 CTACCACCGGCGAATACATTG 59.135 52.381 9.30 0.00 0.00 2.82
779 805 0.035820 ACCACCGGCGAATACATTGT 60.036 50.000 9.30 0.00 0.00 2.71
780 806 1.091537 CCACCGGCGAATACATTGTT 58.908 50.000 9.30 0.00 0.00 2.83
781 807 1.202132 CCACCGGCGAATACATTGTTG 60.202 52.381 9.30 0.00 0.00 3.33
782 808 1.466950 CACCGGCGAATACATTGTTGT 59.533 47.619 9.30 0.00 39.98 3.32
783 809 2.673862 CACCGGCGAATACATTGTTGTA 59.326 45.455 9.30 0.00 42.35 2.41
795 821 5.051891 ACATTGTTGTATTGAGCTCTTGC 57.948 39.130 16.19 6.82 33.16 4.01
796 822 4.082571 ACATTGTTGTATTGAGCTCTTGCC 60.083 41.667 16.19 1.26 35.27 4.52
797 823 2.076100 TGTTGTATTGAGCTCTTGCCG 58.924 47.619 16.19 0.00 40.80 5.69
798 824 1.086696 TTGTATTGAGCTCTTGCCGC 58.913 50.000 16.19 1.27 40.80 6.53
799 825 0.250234 TGTATTGAGCTCTTGCCGCT 59.750 50.000 16.19 0.00 41.15 5.52
803 829 4.810661 GAGCTCTTGCCGCTCGCT 62.811 66.667 6.43 0.00 43.69 4.93
819 845 4.803426 CTGGCTGGACGGCGAGAC 62.803 72.222 16.62 0.00 39.79 3.36
823 849 4.778415 CTGGACGGCGAGACGGTG 62.778 72.222 16.62 0.00 38.39 4.94
825 851 3.823330 GGACGGCGAGACGGTGAT 61.823 66.667 16.62 0.00 38.39 3.06
826 852 2.278013 GACGGCGAGACGGTGATC 60.278 66.667 16.62 0.00 38.39 2.92
827 853 3.047718 GACGGCGAGACGGTGATCA 62.048 63.158 16.62 0.00 38.39 2.92
828 854 2.579787 CGGCGAGACGGTGATCAC 60.580 66.667 17.91 17.91 0.00 3.06
829 855 2.571757 GGCGAGACGGTGATCACA 59.428 61.111 26.47 0.00 0.00 3.58
830 856 1.517257 GGCGAGACGGTGATCACAG 60.517 63.158 26.47 24.35 0.00 3.66
831 857 2.161486 GCGAGACGGTGATCACAGC 61.161 63.158 26.47 17.59 40.59 4.40
837 863 2.668632 GGTGATCACAGCGGGGAA 59.331 61.111 26.47 0.00 34.87 3.97
838 864 1.002624 GGTGATCACAGCGGGGAAA 60.003 57.895 26.47 0.00 34.87 3.13
839 865 0.608035 GGTGATCACAGCGGGGAAAA 60.608 55.000 26.47 0.00 34.87 2.29
840 866 1.463674 GTGATCACAGCGGGGAAAAT 58.536 50.000 21.07 0.00 0.00 1.82
841 867 1.818674 GTGATCACAGCGGGGAAAATT 59.181 47.619 21.07 0.00 0.00 1.82
842 868 3.013921 GTGATCACAGCGGGGAAAATTA 58.986 45.455 21.07 0.00 0.00 1.40
843 869 3.013921 TGATCACAGCGGGGAAAATTAC 58.986 45.455 0.00 0.00 0.00 1.89
844 870 2.871096 TCACAGCGGGGAAAATTACT 57.129 45.000 0.00 0.00 0.00 2.24
845 871 2.706890 TCACAGCGGGGAAAATTACTC 58.293 47.619 0.00 0.00 0.00 2.59
846 872 2.304761 TCACAGCGGGGAAAATTACTCT 59.695 45.455 0.00 0.00 0.00 3.24
847 873 2.420022 CACAGCGGGGAAAATTACTCTG 59.580 50.000 0.00 0.00 0.00 3.35
848 874 1.401905 CAGCGGGGAAAATTACTCTGC 59.598 52.381 7.82 7.82 40.08 4.26
849 875 1.282157 AGCGGGGAAAATTACTCTGCT 59.718 47.619 11.48 11.48 44.42 4.24
850 876 1.671328 GCGGGGAAAATTACTCTGCTC 59.329 52.381 8.44 0.00 37.18 4.26
851 877 2.681097 GCGGGGAAAATTACTCTGCTCT 60.681 50.000 8.44 0.00 37.18 4.09
852 878 3.610911 CGGGGAAAATTACTCTGCTCTT 58.389 45.455 0.00 0.00 0.00 2.85
853 879 3.623510 CGGGGAAAATTACTCTGCTCTTC 59.376 47.826 0.00 0.00 0.00 2.87
854 880 3.948473 GGGGAAAATTACTCTGCTCTTCC 59.052 47.826 0.00 0.00 0.00 3.46
855 881 3.948473 GGGAAAATTACTCTGCTCTTCCC 59.052 47.826 3.63 3.63 42.70 3.97
856 882 3.623510 GGAAAATTACTCTGCTCTTCCCG 59.376 47.826 0.00 0.00 0.00 5.14
857 883 2.317530 AATTACTCTGCTCTTCCCGC 57.682 50.000 0.00 0.00 0.00 6.13
858 884 1.195115 ATTACTCTGCTCTTCCCGCA 58.805 50.000 0.00 0.00 35.80 5.69
859 885 0.973632 TTACTCTGCTCTTCCCGCAA 59.026 50.000 0.00 0.00 36.88 4.85
860 886 0.973632 TACTCTGCTCTTCCCGCAAA 59.026 50.000 0.00 0.00 36.88 3.68
861 887 0.108585 ACTCTGCTCTTCCCGCAAAA 59.891 50.000 0.00 0.00 36.88 2.44
862 888 1.271597 ACTCTGCTCTTCCCGCAAAAT 60.272 47.619 0.00 0.00 36.88 1.82
863 889 1.815003 CTCTGCTCTTCCCGCAAAATT 59.185 47.619 0.00 0.00 36.88 1.82
864 890 3.009723 CTCTGCTCTTCCCGCAAAATTA 58.990 45.455 0.00 0.00 36.88 1.40
865 891 2.747446 TCTGCTCTTCCCGCAAAATTAC 59.253 45.455 0.00 0.00 36.88 1.89
866 892 2.749621 CTGCTCTTCCCGCAAAATTACT 59.250 45.455 0.00 0.00 36.88 2.24
867 893 2.747446 TGCTCTTCCCGCAAAATTACTC 59.253 45.455 0.00 0.00 33.87 2.59
868 894 3.010420 GCTCTTCCCGCAAAATTACTCT 58.990 45.455 0.00 0.00 0.00 3.24
869 895 4.189231 GCTCTTCCCGCAAAATTACTCTA 58.811 43.478 0.00 0.00 0.00 2.43
881 907 2.103537 TTACTCTAGCAAAACCCCGC 57.896 50.000 0.00 0.00 0.00 6.13
884 910 2.034999 CTAGCAAAACCCCGCCCA 59.965 61.111 0.00 0.00 0.00 5.36
890 916 1.155155 AAAACCCCGCCCAGACAAT 59.845 52.632 0.00 0.00 0.00 2.71
909 935 0.034756 TGGATCGGGATAACATGGCG 59.965 55.000 0.00 0.00 0.00 5.69
924 950 4.171103 GCGATACCCGGCCTGGTT 62.171 66.667 25.17 12.10 39.91 3.67
925 951 2.587889 CGATACCCGGCCTGGTTT 59.412 61.111 25.17 16.92 39.91 3.27
926 952 1.523032 CGATACCCGGCCTGGTTTC 60.523 63.158 25.17 23.18 39.91 2.78
927 953 1.605453 GATACCCGGCCTGGTTTCA 59.395 57.895 25.17 6.99 39.91 2.69
928 954 0.746923 GATACCCGGCCTGGTTTCAC 60.747 60.000 25.17 9.66 39.91 3.18
946 980 1.810151 CACTTTCACCCCGTTACCATG 59.190 52.381 0.00 0.00 0.00 3.66
950 984 0.606944 TCACCCCGTTACCATGTTGC 60.607 55.000 0.00 0.00 0.00 4.17
995 1029 3.005897 AGTCCATACACATATCGACAGCC 59.994 47.826 0.00 0.00 32.85 4.85
1000 1034 3.992260 ACACATATCGACAGCCTCTAC 57.008 47.619 0.00 0.00 0.00 2.59
1024 1062 1.889170 GGAGGGGAGAGCAAGTTTTTG 59.111 52.381 0.00 0.00 37.36 2.44
1027 1065 3.374764 AGGGGAGAGCAAGTTTTTGTTT 58.625 40.909 0.00 0.00 36.65 2.83
1064 1102 1.004044 CTGGGAAGTTCACTGATGGCT 59.996 52.381 6.69 0.00 0.00 4.75
1465 1520 4.555709 AACAAGGGCGTCCGTGCA 62.556 61.111 22.34 0.00 44.72 4.57
1628 1684 1.364626 CTGCGTTGCCTGACAGATCC 61.365 60.000 3.32 0.00 31.67 3.36
1724 1781 7.560991 ACAGTCCAAATCATATGCCATTTTAGA 59.439 33.333 0.00 0.00 0.00 2.10
1737 1794 5.649395 TGCCATTTTAGATCTCCAAGTGAAG 59.351 40.000 0.00 0.00 0.00 3.02
1740 1797 3.914426 TTAGATCTCCAAGTGAAGGCC 57.086 47.619 0.00 0.00 0.00 5.19
1741 1798 0.915364 AGATCTCCAAGTGAAGGCCC 59.085 55.000 0.00 0.00 0.00 5.80
1742 1799 0.106967 GATCTCCAAGTGAAGGCCCC 60.107 60.000 0.00 0.00 0.00 5.80
1743 1800 0.846427 ATCTCCAAGTGAAGGCCCCA 60.846 55.000 0.00 0.00 0.00 4.96
1744 1801 1.065410 TCTCCAAGTGAAGGCCCCAA 61.065 55.000 0.00 0.00 0.00 4.12
1745 1802 0.610232 CTCCAAGTGAAGGCCCCAAG 60.610 60.000 0.00 0.00 0.00 3.61
1746 1803 1.153756 CCAAGTGAAGGCCCCAAGT 59.846 57.895 0.00 0.00 0.00 3.16
1747 1804 1.181098 CCAAGTGAAGGCCCCAAGTG 61.181 60.000 0.00 0.00 0.00 3.16
1748 1805 0.178992 CAAGTGAAGGCCCCAAGTGA 60.179 55.000 0.00 0.00 0.00 3.41
1749 1806 0.555769 AAGTGAAGGCCCCAAGTGAA 59.444 50.000 0.00 0.00 0.00 3.18
1750 1807 0.779997 AGTGAAGGCCCCAAGTGAAT 59.220 50.000 0.00 0.00 0.00 2.57
1751 1808 0.890683 GTGAAGGCCCCAAGTGAATG 59.109 55.000 0.00 0.00 0.00 2.67
1752 1809 0.251742 TGAAGGCCCCAAGTGAATGG 60.252 55.000 0.00 0.00 40.35 3.16
1762 1834 3.152341 CCAAGTGAATGGTTCTGCTTCT 58.848 45.455 0.00 0.00 35.65 2.85
1863 1936 8.039603 TGTTTGTTTCTATGGTATGCTTACTG 57.960 34.615 9.39 0.00 0.00 2.74
1904 1977 9.660180 GAGAGTTTCTTGATTACCTGAACTTAT 57.340 33.333 0.00 0.00 0.00 1.73
2039 2112 2.543037 ACAGGAAACAAACCCCAAGT 57.457 45.000 0.00 0.00 0.00 3.16
2052 2125 8.515695 ACAAACCCCAAGTTATATAGCTTAAC 57.484 34.615 11.05 0.00 37.88 2.01
2057 2130 9.167387 ACCCCAAGTTATATAGCTTAACATACT 57.833 33.333 11.05 0.00 33.02 2.12
2123 2196 2.925966 AGATCAAGGAATTGGCCCAA 57.074 45.000 0.00 0.00 0.00 4.12
2125 2198 3.519667 AGATCAAGGAATTGGCCCAAAA 58.480 40.909 0.00 0.00 0.00 2.44
2126 2199 3.516700 AGATCAAGGAATTGGCCCAAAAG 59.483 43.478 0.00 0.00 0.00 2.27
2127 2200 2.969628 TCAAGGAATTGGCCCAAAAGA 58.030 42.857 0.00 0.00 0.00 2.52
2172 2249 6.655003 TCTGAGATACATTTTGTTGAGGGTTC 59.345 38.462 0.00 0.00 0.00 3.62
2183 2260 4.204012 TGTTGAGGGTTCGTTTTGAGATT 58.796 39.130 0.00 0.00 0.00 2.40
2542 2624 2.292569 CGACCCATGTATAGCAGTACGT 59.707 50.000 0.00 0.00 0.00 3.57
2585 2667 2.295885 TCGGAACCTTCTAGATCGTCC 58.704 52.381 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.002624 TTCCATGTCCGACTTGGGC 60.003 57.895 25.61 0.00 42.02 5.36
1 2 0.392998 CCTTCCATGTCCGACTTGGG 60.393 60.000 25.61 14.73 42.02 4.12
2 3 0.613260 TCCTTCCATGTCCGACTTGG 59.387 55.000 22.07 22.07 42.80 3.61
3 4 2.009042 GCTCCTTCCATGTCCGACTTG 61.009 57.143 7.32 7.32 0.00 3.16
4 5 0.250513 GCTCCTTCCATGTCCGACTT 59.749 55.000 0.00 0.00 0.00 3.01
5 6 1.901085 GCTCCTTCCATGTCCGACT 59.099 57.895 0.00 0.00 0.00 4.18
6 7 1.519455 CGCTCCTTCCATGTCCGAC 60.519 63.158 0.00 0.00 0.00 4.79
7 8 1.043116 ATCGCTCCTTCCATGTCCGA 61.043 55.000 0.00 0.00 0.00 4.55
8 9 0.877649 CATCGCTCCTTCCATGTCCG 60.878 60.000 0.00 0.00 0.00 4.79
9 10 1.162800 GCATCGCTCCTTCCATGTCC 61.163 60.000 0.00 0.00 0.00 4.02
10 11 1.493950 CGCATCGCTCCTTCCATGTC 61.494 60.000 0.00 0.00 0.00 3.06
11 12 1.522355 CGCATCGCTCCTTCCATGT 60.522 57.895 0.00 0.00 0.00 3.21
12 13 3.327148 CGCATCGCTCCTTCCATG 58.673 61.111 0.00 0.00 0.00 3.66
28 29 3.118454 AATCTTCCCACACGCGCG 61.118 61.111 30.96 30.96 0.00 6.86
29 30 1.369091 ATCAATCTTCCCACACGCGC 61.369 55.000 5.73 0.00 0.00 6.86
30 31 1.934589 TATCAATCTTCCCACACGCG 58.065 50.000 3.53 3.53 0.00 6.01
31 32 3.733337 AGATATCAATCTTCCCACACGC 58.267 45.455 5.32 0.00 39.55 5.34
52 53 9.737844 TGCAACATGAATGCCTTCTATATTATA 57.262 29.630 20.18 0.79 43.16 0.98
53 54 8.640063 TGCAACATGAATGCCTTCTATATTAT 57.360 30.769 20.18 0.00 43.16 1.28
54 55 8.517056 CATGCAACATGAATGCCTTCTATATTA 58.483 33.333 20.18 3.89 43.16 0.98
55 56 6.964807 TGCAACATGAATGCCTTCTATATT 57.035 33.333 20.18 0.00 43.16 1.28
56 57 6.920817 CATGCAACATGAATGCCTTCTATAT 58.079 36.000 20.18 7.22 43.16 0.86
57 58 6.321848 CATGCAACATGAATGCCTTCTATA 57.678 37.500 20.18 5.58 43.16 1.31
58 59 5.196341 CATGCAACATGAATGCCTTCTAT 57.804 39.130 20.18 8.31 43.16 1.98
59 60 4.642445 CATGCAACATGAATGCCTTCTA 57.358 40.909 20.18 6.70 43.16 2.10
60 61 3.520290 CATGCAACATGAATGCCTTCT 57.480 42.857 20.18 5.37 43.16 2.85
78 79 4.546829 ATTTCTTTCACCATGCAAGCAT 57.453 36.364 0.86 0.86 37.08 3.79
79 80 4.615682 CGTATTTCTTTCACCATGCAAGCA 60.616 41.667 0.00 0.00 0.00 3.91
80 81 3.853671 CGTATTTCTTTCACCATGCAAGC 59.146 43.478 0.00 0.00 0.00 4.01
81 82 4.082787 ACCGTATTTCTTTCACCATGCAAG 60.083 41.667 0.00 0.00 0.00 4.01
82 83 3.823873 ACCGTATTTCTTTCACCATGCAA 59.176 39.130 0.00 0.00 0.00 4.08
83 84 3.417101 ACCGTATTTCTTTCACCATGCA 58.583 40.909 0.00 0.00 0.00 3.96
84 85 4.634443 ACTACCGTATTTCTTTCACCATGC 59.366 41.667 0.00 0.00 0.00 4.06
85 86 5.872617 TCACTACCGTATTTCTTTCACCATG 59.127 40.000 0.00 0.00 0.00 3.66
86 87 6.045072 TCACTACCGTATTTCTTTCACCAT 57.955 37.500 0.00 0.00 0.00 3.55
87 88 5.471556 TCACTACCGTATTTCTTTCACCA 57.528 39.130 0.00 0.00 0.00 4.17
88 89 4.868734 CCTCACTACCGTATTTCTTTCACC 59.131 45.833 0.00 0.00 0.00 4.02
89 90 4.868734 CCCTCACTACCGTATTTCTTTCAC 59.131 45.833 0.00 0.00 0.00 3.18
90 91 4.622220 GCCCTCACTACCGTATTTCTTTCA 60.622 45.833 0.00 0.00 0.00 2.69
91 92 3.869832 GCCCTCACTACCGTATTTCTTTC 59.130 47.826 0.00 0.00 0.00 2.62
92 93 3.262405 TGCCCTCACTACCGTATTTCTTT 59.738 43.478 0.00 0.00 0.00 2.52
93 94 2.835764 TGCCCTCACTACCGTATTTCTT 59.164 45.455 0.00 0.00 0.00 2.52
94 95 2.431057 CTGCCCTCACTACCGTATTTCT 59.569 50.000 0.00 0.00 0.00 2.52
95 96 2.822764 CTGCCCTCACTACCGTATTTC 58.177 52.381 0.00 0.00 0.00 2.17
96 97 1.134491 GCTGCCCTCACTACCGTATTT 60.134 52.381 0.00 0.00 0.00 1.40
97 98 0.464452 GCTGCCCTCACTACCGTATT 59.536 55.000 0.00 0.00 0.00 1.89
98 99 0.397254 AGCTGCCCTCACTACCGTAT 60.397 55.000 0.00 0.00 0.00 3.06
99 100 0.256752 TAGCTGCCCTCACTACCGTA 59.743 55.000 0.00 0.00 0.00 4.02
100 101 0.397254 ATAGCTGCCCTCACTACCGT 60.397 55.000 0.00 0.00 0.00 4.83
101 102 0.753262 AATAGCTGCCCTCACTACCG 59.247 55.000 0.00 0.00 0.00 4.02
102 103 3.283259 AAAATAGCTGCCCTCACTACC 57.717 47.619 0.00 0.00 0.00 3.18
103 104 3.628032 GGAAAAATAGCTGCCCTCACTAC 59.372 47.826 0.00 0.00 0.00 2.73
104 105 3.265737 TGGAAAAATAGCTGCCCTCACTA 59.734 43.478 0.00 0.00 0.00 2.74
105 106 2.041620 TGGAAAAATAGCTGCCCTCACT 59.958 45.455 0.00 0.00 0.00 3.41
106 107 2.446435 TGGAAAAATAGCTGCCCTCAC 58.554 47.619 0.00 0.00 0.00 3.51
107 108 2.897271 TGGAAAAATAGCTGCCCTCA 57.103 45.000 0.00 0.00 0.00 3.86
108 109 4.743057 AAATGGAAAAATAGCTGCCCTC 57.257 40.909 0.00 0.00 0.00 4.30
109 110 5.518865 TCTAAATGGAAAAATAGCTGCCCT 58.481 37.500 0.00 0.00 0.00 5.19
110 111 5.852282 TCTAAATGGAAAAATAGCTGCCC 57.148 39.130 0.00 0.00 0.00 5.36
111 112 7.078228 CGTATCTAAATGGAAAAATAGCTGCC 58.922 38.462 0.00 0.00 0.00 4.85
112 113 7.041372 TCCGTATCTAAATGGAAAAATAGCTGC 60.041 37.037 0.00 0.00 31.42 5.25
113 114 8.378172 TCCGTATCTAAATGGAAAAATAGCTG 57.622 34.615 0.00 0.00 31.42 4.24
114 115 8.974060 TTCCGTATCTAAATGGAAAAATAGCT 57.026 30.769 0.00 0.00 40.74 3.32
125 126 7.417612 CACCTTTCCATTTCCGTATCTAAATG 58.582 38.462 0.00 0.00 40.94 2.32
126 127 6.039382 GCACCTTTCCATTTCCGTATCTAAAT 59.961 38.462 0.00 0.00 0.00 1.40
127 128 5.355910 GCACCTTTCCATTTCCGTATCTAAA 59.644 40.000 0.00 0.00 0.00 1.85
128 129 4.879545 GCACCTTTCCATTTCCGTATCTAA 59.120 41.667 0.00 0.00 0.00 2.10
129 130 4.080807 TGCACCTTTCCATTTCCGTATCTA 60.081 41.667 0.00 0.00 0.00 1.98
130 131 3.279434 GCACCTTTCCATTTCCGTATCT 58.721 45.455 0.00 0.00 0.00 1.98
131 132 3.013921 TGCACCTTTCCATTTCCGTATC 58.986 45.455 0.00 0.00 0.00 2.24
132 133 2.752903 GTGCACCTTTCCATTTCCGTAT 59.247 45.455 5.22 0.00 0.00 3.06
153 154 1.460504 TGACTACTCCCGCACTAGTG 58.539 55.000 18.93 18.93 0.00 2.74
154 155 2.092321 AGATGACTACTCCCGCACTAGT 60.092 50.000 0.00 0.00 0.00 2.57
155 156 2.292016 CAGATGACTACTCCCGCACTAG 59.708 54.545 0.00 0.00 0.00 2.57
156 157 2.298610 CAGATGACTACTCCCGCACTA 58.701 52.381 0.00 0.00 0.00 2.74
165 166 2.499289 CAGGACTTGGCAGATGACTACT 59.501 50.000 0.00 0.00 0.00 2.57
167 168 1.208052 GCAGGACTTGGCAGATGACTA 59.792 52.381 0.00 0.00 0.00 2.59
169 170 2.475666 GCAGGACTTGGCAGATGAC 58.524 57.895 0.00 0.00 0.00 3.06
190 191 3.788766 CGAGGCAAAACGAGCGGG 61.789 66.667 0.00 0.00 0.00 6.13
198 199 2.859165 AGGAGAATCACGAGGCAAAA 57.141 45.000 0.00 0.00 36.25 2.44
206 207 7.043986 CGAAATTGAACTACTAGGAGAATCACG 60.044 40.741 9.61 8.52 36.25 4.35
208 209 6.757010 GCGAAATTGAACTACTAGGAGAATCA 59.243 38.462 9.61 9.90 36.25 2.57
214 215 5.142061 TGTGCGAAATTGAACTACTAGGA 57.858 39.130 0.00 0.00 0.00 2.94
216 217 5.163854 CCCTTGTGCGAAATTGAACTACTAG 60.164 44.000 0.00 0.00 0.00 2.57
217 218 4.693566 CCCTTGTGCGAAATTGAACTACTA 59.306 41.667 0.00 0.00 0.00 1.82
222 223 1.269517 TGCCCTTGTGCGAAATTGAAC 60.270 47.619 0.00 0.00 0.00 3.18
225 226 0.031857 TGTGCCCTTGTGCGAAATTG 59.968 50.000 0.00 0.00 0.00 2.32
229 230 1.610363 TTATTGTGCCCTTGTGCGAA 58.390 45.000 0.00 0.00 0.00 4.70
230 231 1.610363 TTTATTGTGCCCTTGTGCGA 58.390 45.000 0.00 0.00 0.00 5.10
231 232 2.430546 TTTTATTGTGCCCTTGTGCG 57.569 45.000 0.00 0.00 0.00 5.34
299 300 7.489160 ACCTGACAGTTTTAGATTCAAAAACC 58.511 34.615 0.93 0.00 44.29 3.27
306 307 7.139392 GGTTGAAACCTGACAGTTTTAGATTC 58.861 38.462 4.92 0.00 45.75 2.52
307 308 7.039313 GGTTGAAACCTGACAGTTTTAGATT 57.961 36.000 4.92 0.00 45.75 2.40
401 405 3.976942 TGTTGAAACTTAGTACGAGCGAC 59.023 43.478 0.00 0.00 0.00 5.19
403 407 5.511088 AATGTTGAAACTTAGTACGAGCG 57.489 39.130 0.00 0.00 0.00 5.03
463 469 7.479291 CAGCGCTTTCAAATAAAATCCATTTTG 59.521 33.333 7.50 0.00 40.00 2.44
473 479 3.316588 TGTGACCAGCGCTTTCAAATAAA 59.683 39.130 17.93 2.39 0.00 1.40
480 486 0.944386 TTCTTGTGACCAGCGCTTTC 59.056 50.000 7.50 8.19 0.00 2.62
482 488 1.609208 ATTTCTTGTGACCAGCGCTT 58.391 45.000 7.50 0.00 0.00 4.68
484 490 1.201921 CGTATTTCTTGTGACCAGCGC 60.202 52.381 0.00 0.00 0.00 5.92
487 493 7.770801 TCATATTCGTATTTCTTGTGACCAG 57.229 36.000 0.00 0.00 0.00 4.00
525 531 7.283633 GCTTCCGATTTTCAAAGCTTTAAAAG 58.716 34.615 12.25 8.42 40.68 2.27
528 534 5.221342 TGGCTTCCGATTTTCAAAGCTTTAA 60.221 36.000 12.25 3.14 42.85 1.52
532 538 2.238521 TGGCTTCCGATTTTCAAAGCT 58.761 42.857 5.98 0.00 42.85 3.74
533 539 2.723124 TGGCTTCCGATTTTCAAAGC 57.277 45.000 0.00 0.00 42.60 3.51
563 589 1.067060 CATGCATGTTCCTGATGCCTG 59.933 52.381 18.91 0.00 44.76 4.85
569 595 1.380246 GGGGCATGCATGTTCCTGA 60.380 57.895 26.79 0.00 0.00 3.86
570 596 2.428925 GGGGGCATGCATGTTCCTG 61.429 63.158 26.79 3.24 0.00 3.86
577 603 4.764771 AAGTGCGGGGGCATGCAT 62.765 61.111 21.36 0.00 43.96 3.96
597 623 7.509546 TCTAAATGGGAGAGGATTTGTGATAC 58.490 38.462 0.00 0.00 0.00 2.24
599 625 6.581388 TCTAAATGGGAGAGGATTTGTGAT 57.419 37.500 0.00 0.00 0.00 3.06
600 626 6.581388 ATCTAAATGGGAGAGGATTTGTGA 57.419 37.500 0.00 0.00 0.00 3.58
626 652 9.521503 GCCTTAAAAATCAGACATAAATCTTCC 57.478 33.333 0.00 0.00 0.00 3.46
627 653 9.226345 CGCCTTAAAAATCAGACATAAATCTTC 57.774 33.333 0.00 0.00 0.00 2.87
628 654 7.702348 GCGCCTTAAAAATCAGACATAAATCTT 59.298 33.333 0.00 0.00 0.00 2.40
629 655 7.148086 TGCGCCTTAAAAATCAGACATAAATCT 60.148 33.333 4.18 0.00 0.00 2.40
630 656 6.972328 TGCGCCTTAAAAATCAGACATAAATC 59.028 34.615 4.18 0.00 0.00 2.17
631 657 6.862209 TGCGCCTTAAAAATCAGACATAAAT 58.138 32.000 4.18 0.00 0.00 1.40
632 658 6.260870 TGCGCCTTAAAAATCAGACATAAA 57.739 33.333 4.18 0.00 0.00 1.40
633 659 5.888691 TGCGCCTTAAAAATCAGACATAA 57.111 34.783 4.18 0.00 0.00 1.90
634 660 5.888691 TTGCGCCTTAAAAATCAGACATA 57.111 34.783 4.18 0.00 0.00 2.29
635 661 4.782019 TTGCGCCTTAAAAATCAGACAT 57.218 36.364 4.18 0.00 0.00 3.06
636 662 4.782019 ATTGCGCCTTAAAAATCAGACA 57.218 36.364 4.18 0.00 0.00 3.41
637 663 7.587757 CAGTATATTGCGCCTTAAAAATCAGAC 59.412 37.037 4.18 0.00 0.00 3.51
638 664 7.282224 ACAGTATATTGCGCCTTAAAAATCAGA 59.718 33.333 4.18 0.00 0.00 3.27
639 665 7.376866 CACAGTATATTGCGCCTTAAAAATCAG 59.623 37.037 4.18 0.00 0.00 2.90
640 666 7.066404 TCACAGTATATTGCGCCTTAAAAATCA 59.934 33.333 4.18 0.00 0.00 2.57
641 667 7.414436 TCACAGTATATTGCGCCTTAAAAATC 58.586 34.615 4.18 0.00 0.00 2.17
642 668 7.328277 TCACAGTATATTGCGCCTTAAAAAT 57.672 32.000 4.18 0.00 0.00 1.82
643 669 6.745159 TCACAGTATATTGCGCCTTAAAAA 57.255 33.333 4.18 0.00 0.00 1.94
644 670 6.317642 ACATCACAGTATATTGCGCCTTAAAA 59.682 34.615 4.18 0.00 0.00 1.52
645 671 5.820423 ACATCACAGTATATTGCGCCTTAAA 59.180 36.000 4.18 0.00 0.00 1.52
646 672 5.364778 ACATCACAGTATATTGCGCCTTAA 58.635 37.500 4.18 0.00 0.00 1.85
647 673 4.956085 ACATCACAGTATATTGCGCCTTA 58.044 39.130 4.18 0.00 0.00 2.69
648 674 3.808728 ACATCACAGTATATTGCGCCTT 58.191 40.909 4.18 0.00 0.00 4.35
649 675 3.475566 ACATCACAGTATATTGCGCCT 57.524 42.857 4.18 0.00 0.00 5.52
650 676 4.307432 AGTACATCACAGTATATTGCGCC 58.693 43.478 4.18 0.00 0.00 6.53
651 677 4.386049 GGAGTACATCACAGTATATTGCGC 59.614 45.833 0.00 0.00 0.00 6.09
652 678 5.773575 AGGAGTACATCACAGTATATTGCG 58.226 41.667 0.00 0.00 0.00 4.85
653 679 7.276658 GCATAGGAGTACATCACAGTATATTGC 59.723 40.741 0.00 0.00 0.00 3.56
654 680 8.526978 AGCATAGGAGTACATCACAGTATATTG 58.473 37.037 0.00 0.00 0.00 1.90
655 681 8.657387 AGCATAGGAGTACATCACAGTATATT 57.343 34.615 0.00 0.00 0.00 1.28
656 682 8.657387 AAGCATAGGAGTACATCACAGTATAT 57.343 34.615 0.00 0.00 0.00 0.86
657 683 9.755122 ATAAGCATAGGAGTACATCACAGTATA 57.245 33.333 0.00 0.00 0.00 1.47
658 684 6.985653 AAGCATAGGAGTACATCACAGTAT 57.014 37.500 0.00 0.00 0.00 2.12
659 685 7.724061 TGATAAGCATAGGAGTACATCACAGTA 59.276 37.037 0.00 0.00 0.00 2.74
660 686 6.551227 TGATAAGCATAGGAGTACATCACAGT 59.449 38.462 0.00 0.00 0.00 3.55
661 687 6.986250 TGATAAGCATAGGAGTACATCACAG 58.014 40.000 0.00 0.00 0.00 3.66
662 688 6.976934 TGATAAGCATAGGAGTACATCACA 57.023 37.500 0.00 0.00 0.00 3.58
663 689 7.210174 TGTTGATAAGCATAGGAGTACATCAC 58.790 38.462 0.00 0.00 0.00 3.06
664 690 7.360113 TGTTGATAAGCATAGGAGTACATCA 57.640 36.000 0.00 0.00 0.00 3.07
665 691 7.928706 ACTTGTTGATAAGCATAGGAGTACATC 59.071 37.037 0.00 0.00 0.00 3.06
666 692 7.796054 ACTTGTTGATAAGCATAGGAGTACAT 58.204 34.615 0.00 0.00 0.00 2.29
667 693 7.182817 ACTTGTTGATAAGCATAGGAGTACA 57.817 36.000 0.00 0.00 0.00 2.90
668 694 9.765795 ATAACTTGTTGATAAGCATAGGAGTAC 57.234 33.333 0.00 0.00 0.00 2.73
670 696 9.988815 CTATAACTTGTTGATAAGCATAGGAGT 57.011 33.333 0.00 0.00 30.24 3.85
671 697 9.429359 CCTATAACTTGTTGATAAGCATAGGAG 57.571 37.037 15.94 3.19 42.19 3.69
672 698 9.154632 TCCTATAACTTGTTGATAAGCATAGGA 57.845 33.333 17.82 17.82 43.77 2.94
673 699 9.778741 TTCCTATAACTTGTTGATAAGCATAGG 57.221 33.333 15.36 15.36 41.67 2.57
677 703 9.290988 TGTTTTCCTATAACTTGTTGATAAGCA 57.709 29.630 0.00 0.00 0.00 3.91
693 719 9.520515 AGACAACATCATAACTTGTTTTCCTAT 57.479 29.630 0.00 0.00 34.57 2.57
694 720 8.783093 CAGACAACATCATAACTTGTTTTCCTA 58.217 33.333 0.00 0.00 34.57 2.94
695 721 7.502226 TCAGACAACATCATAACTTGTTTTCCT 59.498 33.333 0.00 0.00 34.57 3.36
696 722 7.648142 TCAGACAACATCATAACTTGTTTTCC 58.352 34.615 0.00 0.00 34.57 3.13
697 723 9.683069 ATTCAGACAACATCATAACTTGTTTTC 57.317 29.630 0.00 0.00 33.93 2.29
698 724 9.467258 CATTCAGACAACATCATAACTTGTTTT 57.533 29.630 0.00 0.00 33.93 2.43
699 725 8.632679 ACATTCAGACAACATCATAACTTGTTT 58.367 29.630 0.00 0.00 33.93 2.83
700 726 8.169977 ACATTCAGACAACATCATAACTTGTT 57.830 30.769 0.00 0.00 36.53 2.83
701 727 7.750229 ACATTCAGACAACATCATAACTTGT 57.250 32.000 0.00 0.00 0.00 3.16
702 728 8.908678 CAAACATTCAGACAACATCATAACTTG 58.091 33.333 0.00 0.00 0.00 3.16
703 729 8.849168 TCAAACATTCAGACAACATCATAACTT 58.151 29.630 0.00 0.00 0.00 2.66
704 730 8.394971 TCAAACATTCAGACAACATCATAACT 57.605 30.769 0.00 0.00 0.00 2.24
705 731 8.506437 TCTCAAACATTCAGACAACATCATAAC 58.494 33.333 0.00 0.00 0.00 1.89
706 732 8.506437 GTCTCAAACATTCAGACAACATCATAA 58.494 33.333 0.00 0.00 37.17 1.90
707 733 7.879677 AGTCTCAAACATTCAGACAACATCATA 59.120 33.333 0.00 0.00 39.29 2.15
708 734 6.713903 AGTCTCAAACATTCAGACAACATCAT 59.286 34.615 0.00 0.00 39.29 2.45
709 735 6.057533 AGTCTCAAACATTCAGACAACATCA 58.942 36.000 0.00 0.00 39.29 3.07
710 736 6.551385 AGTCTCAAACATTCAGACAACATC 57.449 37.500 0.00 0.00 39.29 3.06
711 737 6.543465 TCAAGTCTCAAACATTCAGACAACAT 59.457 34.615 0.00 0.00 39.29 2.71
712 738 5.879777 TCAAGTCTCAAACATTCAGACAACA 59.120 36.000 0.00 0.00 39.29 3.33
713 739 6.363577 TCAAGTCTCAAACATTCAGACAAC 57.636 37.500 0.00 0.00 39.29 3.32
714 740 6.543465 ACATCAAGTCTCAAACATTCAGACAA 59.457 34.615 0.00 0.00 39.29 3.18
715 741 6.017687 CACATCAAGTCTCAAACATTCAGACA 60.018 38.462 0.00 0.00 39.29 3.41
716 742 6.369005 CACATCAAGTCTCAAACATTCAGAC 58.631 40.000 0.00 0.00 37.42 3.51
717 743 5.049198 GCACATCAAGTCTCAAACATTCAGA 60.049 40.000 0.00 0.00 0.00 3.27
718 744 5.048921 AGCACATCAAGTCTCAAACATTCAG 60.049 40.000 0.00 0.00 0.00 3.02
719 745 4.823442 AGCACATCAAGTCTCAAACATTCA 59.177 37.500 0.00 0.00 0.00 2.57
720 746 5.368256 AGCACATCAAGTCTCAAACATTC 57.632 39.130 0.00 0.00 0.00 2.67
721 747 4.217118 GGAGCACATCAAGTCTCAAACATT 59.783 41.667 0.00 0.00 0.00 2.71
722 748 3.755378 GGAGCACATCAAGTCTCAAACAT 59.245 43.478 0.00 0.00 0.00 2.71
723 749 3.141398 GGAGCACATCAAGTCTCAAACA 58.859 45.455 0.00 0.00 0.00 2.83
724 750 3.406764 AGGAGCACATCAAGTCTCAAAC 58.593 45.455 0.00 0.00 0.00 2.93
725 751 3.777106 AGGAGCACATCAAGTCTCAAA 57.223 42.857 0.00 0.00 0.00 2.69
726 752 5.181009 CAATAGGAGCACATCAAGTCTCAA 58.819 41.667 0.00 0.00 0.00 3.02
727 753 4.763073 CAATAGGAGCACATCAAGTCTCA 58.237 43.478 0.00 0.00 0.00 3.27
728 754 3.559242 GCAATAGGAGCACATCAAGTCTC 59.441 47.826 0.00 0.00 0.00 3.36
729 755 3.199508 AGCAATAGGAGCACATCAAGTCT 59.800 43.478 0.00 0.00 0.00 3.24
730 756 3.539604 AGCAATAGGAGCACATCAAGTC 58.460 45.455 0.00 0.00 0.00 3.01
731 757 3.054875 TGAGCAATAGGAGCACATCAAGT 60.055 43.478 0.00 0.00 0.00 3.16
732 758 3.538591 TGAGCAATAGGAGCACATCAAG 58.461 45.455 0.00 0.00 0.00 3.02
733 759 3.632643 TGAGCAATAGGAGCACATCAA 57.367 42.857 0.00 0.00 0.00 2.57
734 760 3.851458 ATGAGCAATAGGAGCACATCA 57.149 42.857 0.00 0.00 38.62 3.07
735 761 5.298777 AGAAAATGAGCAATAGGAGCACATC 59.701 40.000 0.00 0.00 41.36 3.06
736 762 5.198965 AGAAAATGAGCAATAGGAGCACAT 58.801 37.500 0.00 0.00 43.48 3.21
737 763 4.592942 AGAAAATGAGCAATAGGAGCACA 58.407 39.130 0.00 0.00 37.02 4.57
738 764 5.008118 GGTAGAAAATGAGCAATAGGAGCAC 59.992 44.000 0.00 0.00 0.00 4.40
739 765 5.126067 GGTAGAAAATGAGCAATAGGAGCA 58.874 41.667 0.00 0.00 0.00 4.26
740 766 5.008118 GTGGTAGAAAATGAGCAATAGGAGC 59.992 44.000 0.00 0.00 0.00 4.70
741 767 5.529060 GGTGGTAGAAAATGAGCAATAGGAG 59.471 44.000 0.00 0.00 0.00 3.69
742 768 5.437060 GGTGGTAGAAAATGAGCAATAGGA 58.563 41.667 0.00 0.00 0.00 2.94
743 769 4.273480 CGGTGGTAGAAAATGAGCAATAGG 59.727 45.833 0.00 0.00 0.00 2.57
744 770 4.273480 CCGGTGGTAGAAAATGAGCAATAG 59.727 45.833 0.00 0.00 0.00 1.73
745 771 4.196193 CCGGTGGTAGAAAATGAGCAATA 58.804 43.478 0.00 0.00 0.00 1.90
746 772 3.016736 CCGGTGGTAGAAAATGAGCAAT 58.983 45.455 0.00 0.00 0.00 3.56
747 773 2.432444 CCGGTGGTAGAAAATGAGCAA 58.568 47.619 0.00 0.00 0.00 3.91
748 774 1.948611 GCCGGTGGTAGAAAATGAGCA 60.949 52.381 1.90 0.00 0.00 4.26
749 775 0.733150 GCCGGTGGTAGAAAATGAGC 59.267 55.000 1.90 0.00 0.00 4.26
750 776 1.006832 CGCCGGTGGTAGAAAATGAG 58.993 55.000 7.26 0.00 0.00 2.90
751 777 0.609151 TCGCCGGTGGTAGAAAATGA 59.391 50.000 16.49 0.00 0.00 2.57
752 778 1.444836 TTCGCCGGTGGTAGAAAATG 58.555 50.000 16.49 0.00 0.00 2.32
753 779 2.413310 ATTCGCCGGTGGTAGAAAAT 57.587 45.000 16.49 3.18 0.00 1.82
754 780 2.028294 TGTATTCGCCGGTGGTAGAAAA 60.028 45.455 16.49 0.44 0.00 2.29
755 781 1.549620 TGTATTCGCCGGTGGTAGAAA 59.450 47.619 16.49 1.27 0.00 2.52
756 782 1.184431 TGTATTCGCCGGTGGTAGAA 58.816 50.000 16.49 7.94 0.00 2.10
757 783 1.405872 ATGTATTCGCCGGTGGTAGA 58.594 50.000 16.49 7.84 0.00 2.59
758 784 1.864711 CAATGTATTCGCCGGTGGTAG 59.135 52.381 16.49 0.00 0.00 3.18
759 785 1.207570 ACAATGTATTCGCCGGTGGTA 59.792 47.619 16.49 6.05 0.00 3.25
760 786 0.035820 ACAATGTATTCGCCGGTGGT 60.036 50.000 16.49 7.12 0.00 4.16
761 787 1.091537 AACAATGTATTCGCCGGTGG 58.908 50.000 16.49 1.03 0.00 4.61
762 788 1.466950 ACAACAATGTATTCGCCGGTG 59.533 47.619 9.28 9.28 38.24 4.94
763 789 1.816074 ACAACAATGTATTCGCCGGT 58.184 45.000 1.90 0.00 38.24 5.28
769 795 7.430502 GCAAGAGCTCAATACAACAATGTATTC 59.569 37.037 17.77 1.70 46.02 1.75
771 797 6.183360 GGCAAGAGCTCAATACAACAATGTAT 60.183 38.462 17.77 0.00 46.07 2.29
772 798 5.123820 GGCAAGAGCTCAATACAACAATGTA 59.876 40.000 17.77 0.00 42.59 2.29
773 799 4.082571 GGCAAGAGCTCAATACAACAATGT 60.083 41.667 17.77 0.00 41.35 2.71
774 800 4.418392 GGCAAGAGCTCAATACAACAATG 58.582 43.478 17.77 0.35 41.70 2.82
775 801 3.127548 CGGCAAGAGCTCAATACAACAAT 59.872 43.478 17.77 0.00 41.70 2.71
776 802 2.483877 CGGCAAGAGCTCAATACAACAA 59.516 45.455 17.77 0.00 41.70 2.83
777 803 2.076100 CGGCAAGAGCTCAATACAACA 58.924 47.619 17.77 0.00 41.70 3.33
778 804 1.202076 GCGGCAAGAGCTCAATACAAC 60.202 52.381 17.77 0.00 41.70 3.32
779 805 1.086696 GCGGCAAGAGCTCAATACAA 58.913 50.000 17.77 0.00 41.70 2.41
780 806 0.250234 AGCGGCAAGAGCTCAATACA 59.750 50.000 17.77 0.00 41.83 2.29
781 807 3.071580 AGCGGCAAGAGCTCAATAC 57.928 52.632 17.77 1.83 41.83 1.89
802 828 4.803426 GTCTCGCCGTCCAGCCAG 62.803 72.222 0.00 0.00 0.00 4.85
806 832 4.778415 CACCGTCTCGCCGTCCAG 62.778 72.222 0.00 0.00 0.00 3.86
808 834 3.753070 GATCACCGTCTCGCCGTCC 62.753 68.421 0.00 0.00 0.00 4.79
809 835 2.278013 GATCACCGTCTCGCCGTC 60.278 66.667 0.00 0.00 0.00 4.79
810 836 3.060000 TGATCACCGTCTCGCCGT 61.060 61.111 0.00 0.00 0.00 5.68
811 837 2.579787 GTGATCACCGTCTCGCCG 60.580 66.667 15.31 0.00 0.00 6.46
812 838 1.517257 CTGTGATCACCGTCTCGCC 60.517 63.158 22.85 0.00 0.00 5.54
813 839 2.161486 GCTGTGATCACCGTCTCGC 61.161 63.158 22.85 11.45 0.00 5.03
814 840 1.869574 CGCTGTGATCACCGTCTCG 60.870 63.158 22.85 13.96 0.00 4.04
815 841 1.517257 CCGCTGTGATCACCGTCTC 60.517 63.158 22.85 6.61 0.00 3.36
816 842 2.573869 CCGCTGTGATCACCGTCT 59.426 61.111 22.85 0.00 0.00 4.18
817 843 2.509336 CCCGCTGTGATCACCGTC 60.509 66.667 22.85 11.51 0.00 4.79
818 844 4.082523 CCCCGCTGTGATCACCGT 62.083 66.667 22.85 0.00 0.00 4.83
819 845 2.796483 TTTCCCCGCTGTGATCACCG 62.796 60.000 22.85 17.59 0.00 4.94
820 846 0.608035 TTTTCCCCGCTGTGATCACC 60.608 55.000 22.85 7.67 0.00 4.02
821 847 1.463674 ATTTTCCCCGCTGTGATCAC 58.536 50.000 19.27 19.27 0.00 3.06
822 848 2.214376 AATTTTCCCCGCTGTGATCA 57.786 45.000 0.00 0.00 0.00 2.92
823 849 3.279434 AGTAATTTTCCCCGCTGTGATC 58.721 45.455 0.00 0.00 0.00 2.92
824 850 3.054361 AGAGTAATTTTCCCCGCTGTGAT 60.054 43.478 0.00 0.00 0.00 3.06
825 851 2.304761 AGAGTAATTTTCCCCGCTGTGA 59.695 45.455 0.00 0.00 0.00 3.58
826 852 2.420022 CAGAGTAATTTTCCCCGCTGTG 59.580 50.000 0.00 0.00 0.00 3.66
827 853 2.711542 CAGAGTAATTTTCCCCGCTGT 58.288 47.619 0.00 0.00 0.00 4.40
828 854 1.401905 GCAGAGTAATTTTCCCCGCTG 59.598 52.381 0.00 0.00 0.00 5.18
829 855 1.282157 AGCAGAGTAATTTTCCCCGCT 59.718 47.619 0.00 0.00 0.00 5.52
830 856 1.671328 GAGCAGAGTAATTTTCCCCGC 59.329 52.381 0.00 0.00 0.00 6.13
831 857 3.268023 AGAGCAGAGTAATTTTCCCCG 57.732 47.619 0.00 0.00 0.00 5.73
832 858 3.948473 GGAAGAGCAGAGTAATTTTCCCC 59.052 47.826 0.00 0.00 0.00 4.81
833 859 3.948473 GGGAAGAGCAGAGTAATTTTCCC 59.052 47.826 3.85 3.85 43.73 3.97
834 860 3.623510 CGGGAAGAGCAGAGTAATTTTCC 59.376 47.826 0.00 0.00 33.54 3.13
835 861 3.064134 GCGGGAAGAGCAGAGTAATTTTC 59.936 47.826 0.00 0.00 34.19 2.29
836 862 3.010420 GCGGGAAGAGCAGAGTAATTTT 58.990 45.455 0.00 0.00 34.19 1.82
837 863 2.027192 TGCGGGAAGAGCAGAGTAATTT 60.027 45.455 0.00 0.00 40.01 1.82
838 864 1.555075 TGCGGGAAGAGCAGAGTAATT 59.445 47.619 0.00 0.00 40.01 1.40
839 865 1.195115 TGCGGGAAGAGCAGAGTAAT 58.805 50.000 0.00 0.00 40.01 1.89
840 866 0.973632 TTGCGGGAAGAGCAGAGTAA 59.026 50.000 0.00 0.00 46.01 2.24
841 867 0.973632 TTTGCGGGAAGAGCAGAGTA 59.026 50.000 0.00 0.00 46.01 2.59
842 868 0.108585 TTTTGCGGGAAGAGCAGAGT 59.891 50.000 0.00 0.00 46.01 3.24
843 869 1.457346 ATTTTGCGGGAAGAGCAGAG 58.543 50.000 0.00 0.00 46.01 3.35
844 870 1.909700 AATTTTGCGGGAAGAGCAGA 58.090 45.000 0.00 0.00 46.01 4.26
845 871 2.749621 AGTAATTTTGCGGGAAGAGCAG 59.250 45.455 0.00 0.00 46.01 4.24
846 872 2.747446 GAGTAATTTTGCGGGAAGAGCA 59.253 45.455 0.00 0.00 43.59 4.26
847 873 3.010420 AGAGTAATTTTGCGGGAAGAGC 58.990 45.455 0.00 0.00 0.00 4.09
848 874 4.271291 GCTAGAGTAATTTTGCGGGAAGAG 59.729 45.833 0.00 0.00 0.00 2.85
849 875 4.189231 GCTAGAGTAATTTTGCGGGAAGA 58.811 43.478 0.00 0.00 0.00 2.87
850 876 3.938963 TGCTAGAGTAATTTTGCGGGAAG 59.061 43.478 0.00 0.00 0.00 3.46
851 877 3.945346 TGCTAGAGTAATTTTGCGGGAA 58.055 40.909 0.00 0.00 0.00 3.97
852 878 3.620427 TGCTAGAGTAATTTTGCGGGA 57.380 42.857 0.00 0.00 0.00 5.14
853 879 4.695217 TTTGCTAGAGTAATTTTGCGGG 57.305 40.909 0.00 0.00 0.00 6.13
854 880 4.857037 GGTTTTGCTAGAGTAATTTTGCGG 59.143 41.667 0.00 0.00 0.00 5.69
855 881 4.857037 GGGTTTTGCTAGAGTAATTTTGCG 59.143 41.667 0.00 0.00 0.00 4.85
856 882 5.168569 GGGGTTTTGCTAGAGTAATTTTGC 58.831 41.667 0.00 0.00 0.00 3.68
857 883 5.399013 CGGGGTTTTGCTAGAGTAATTTTG 58.601 41.667 0.00 0.00 0.00 2.44
858 884 4.082408 GCGGGGTTTTGCTAGAGTAATTTT 60.082 41.667 0.00 0.00 0.00 1.82
859 885 3.442625 GCGGGGTTTTGCTAGAGTAATTT 59.557 43.478 0.00 0.00 0.00 1.82
860 886 3.014623 GCGGGGTTTTGCTAGAGTAATT 58.985 45.455 0.00 0.00 0.00 1.40
861 887 2.640184 GCGGGGTTTTGCTAGAGTAAT 58.360 47.619 0.00 0.00 0.00 1.89
862 888 1.339342 GGCGGGGTTTTGCTAGAGTAA 60.339 52.381 0.00 0.00 0.00 2.24
863 889 0.251073 GGCGGGGTTTTGCTAGAGTA 59.749 55.000 0.00 0.00 0.00 2.59
864 890 1.002502 GGCGGGGTTTTGCTAGAGT 60.003 57.895 0.00 0.00 0.00 3.24
865 891 1.749258 GGGCGGGGTTTTGCTAGAG 60.749 63.158 0.00 0.00 0.00 2.43
866 892 2.353573 GGGCGGGGTTTTGCTAGA 59.646 61.111 0.00 0.00 0.00 2.43
867 893 2.034999 TGGGCGGGGTTTTGCTAG 59.965 61.111 0.00 0.00 0.00 3.42
868 894 2.034999 CTGGGCGGGGTTTTGCTA 59.965 61.111 0.00 0.00 0.00 3.49
869 895 3.897122 TCTGGGCGGGGTTTTGCT 61.897 61.111 0.00 0.00 0.00 3.91
881 907 0.767375 ATCCCGATCCATTGTCTGGG 59.233 55.000 0.00 0.00 45.98 4.45
884 910 4.505566 CCATGTTATCCCGATCCATTGTCT 60.506 45.833 0.00 0.00 0.00 3.41
890 916 0.034756 CGCCATGTTATCCCGATCCA 59.965 55.000 0.00 0.00 0.00 3.41
901 927 2.203153 GCCGGGTATCGCCATGTT 60.203 61.111 2.18 0.00 39.65 2.71
909 935 0.746923 GTGAAACCAGGCCGGGTATC 60.747 60.000 28.90 14.32 41.32 2.24
921 947 1.395635 AACGGGGTGAAAGTGAAACC 58.604 50.000 0.00 0.00 37.80 3.27
923 949 2.092538 TGGTAACGGGGTGAAAGTGAAA 60.093 45.455 0.00 0.00 42.51 2.69
924 950 1.489649 TGGTAACGGGGTGAAAGTGAA 59.510 47.619 0.00 0.00 42.51 3.18
925 951 1.129917 TGGTAACGGGGTGAAAGTGA 58.870 50.000 0.00 0.00 42.51 3.41
926 952 1.810151 CATGGTAACGGGGTGAAAGTG 59.190 52.381 0.00 0.00 42.51 3.16
927 953 1.422402 ACATGGTAACGGGGTGAAAGT 59.578 47.619 0.00 0.00 42.51 2.66
928 954 2.194201 ACATGGTAACGGGGTGAAAG 57.806 50.000 0.00 0.00 42.51 2.62
946 980 2.505557 GCATGCGCAGAAGGCAAC 60.506 61.111 18.32 0.00 44.66 4.17
971 1005 4.681942 GCTGTCGATATGTGTATGGACTTC 59.318 45.833 10.48 1.84 42.89 3.01
995 1029 1.074889 GCTCTCCCCTCCTAGGTAGAG 59.925 61.905 9.08 14.09 42.25 2.43
1000 1034 0.031616 ACTTGCTCTCCCCTCCTAGG 60.032 60.000 0.82 0.82 34.30 3.02
1024 1062 1.212751 GCTGGTCGCCATGGAAAAC 59.787 57.895 18.40 9.49 30.82 2.43
1027 1065 2.359850 GTGCTGGTCGCCATGGAA 60.360 61.111 18.40 0.00 38.05 3.53
1064 1102 4.966787 GTGCTTCGGGCCCCACAA 62.967 66.667 18.66 5.68 40.92 3.33
1628 1684 4.700268 ACAGCTAGAGCATAGATCGATG 57.300 45.455 0.54 11.14 45.16 3.84
1641 1697 5.102313 CACATATCGACACAAACAGCTAGA 58.898 41.667 0.00 0.00 0.00 2.43
1724 1781 0.846427 TGGGGCCTTCACTTGGAGAT 60.846 55.000 0.84 0.00 0.00 2.75
1737 1794 0.251787 AGAACCATTCACTTGGGGCC 60.252 55.000 0.00 0.00 41.35 5.80
1740 1797 1.915141 AGCAGAACCATTCACTTGGG 58.085 50.000 0.00 0.00 41.35 4.12
1741 1798 3.057736 CAGAAGCAGAACCATTCACTTGG 60.058 47.826 2.67 0.00 42.82 3.61
1742 1799 3.611057 GCAGAAGCAGAACCATTCACTTG 60.611 47.826 2.67 0.00 41.58 3.16
1743 1800 2.555757 GCAGAAGCAGAACCATTCACTT 59.444 45.455 0.00 0.00 41.58 3.16
1744 1801 2.157738 GCAGAAGCAGAACCATTCACT 58.842 47.619 0.00 0.00 41.58 3.41
1745 1802 2.095364 CAGCAGAAGCAGAACCATTCAC 60.095 50.000 0.00 0.00 45.49 3.18
1746 1803 2.156917 CAGCAGAAGCAGAACCATTCA 58.843 47.619 0.00 0.00 45.49 2.57
1747 1804 2.095364 CACAGCAGAAGCAGAACCATTC 60.095 50.000 0.00 0.00 45.49 2.67
1748 1805 1.884579 CACAGCAGAAGCAGAACCATT 59.115 47.619 0.00 0.00 45.49 3.16
1749 1806 1.202855 ACACAGCAGAAGCAGAACCAT 60.203 47.619 0.00 0.00 45.49 3.55
1750 1807 0.181114 ACACAGCAGAAGCAGAACCA 59.819 50.000 0.00 0.00 45.49 3.67
1751 1808 1.265365 GAACACAGCAGAAGCAGAACC 59.735 52.381 0.00 0.00 45.49 3.62
1752 1809 2.216898 AGAACACAGCAGAAGCAGAAC 58.783 47.619 0.00 0.00 45.49 3.01
1762 1834 2.297701 GGAAACCAGAAGAACACAGCA 58.702 47.619 0.00 0.00 0.00 4.41
1856 1929 2.030007 TGCATTTCTTGGTGCAGTAAGC 60.030 45.455 5.25 0.00 45.60 3.09
1863 1936 2.157738 ACTCTCTGCATTTCTTGGTGC 58.842 47.619 0.00 0.00 41.61 5.01
1924 1997 6.809196 CCTATGTAAGGCGTCTCTTGATAATC 59.191 42.308 0.00 0.00 38.97 1.75
1951 2024 1.421268 ACAGGAAGACCAGTTGATGCA 59.579 47.619 0.00 0.00 38.94 3.96
2088 2161 6.484643 TCCTTGATCTTCTGAAGTGTTTTCAG 59.515 38.462 16.43 9.96 45.38 3.02
2148 2224 6.402550 CGAACCCTCAACAAAATGTATCTCAG 60.403 42.308 0.00 0.00 0.00 3.35
2293 2372 3.047877 GGCCGTGACGAAACCTGG 61.048 66.667 6.54 0.00 0.00 4.45
2428 2510 0.472471 GGAATTCCTCCGGTATGCCA 59.528 55.000 17.73 0.00 29.57 4.92
2430 2512 0.765510 AGGGAATTCCTCCGGTATGC 59.234 55.000 23.63 4.06 44.06 3.14
2435 2517 3.556423 CGGTAAATAGGGAATTCCTCCGG 60.556 52.174 23.63 0.00 44.06 5.14
2488 2570 1.204941 GATAGGTCGACTTGCCTGTGT 59.795 52.381 16.46 0.00 36.38 3.72
2542 2624 3.328382 ACGGTTTACTAGAATGCTGCA 57.672 42.857 4.13 4.13 0.00 4.41
2585 2667 2.793288 ACCGGTAAATACCAACTGGG 57.207 50.000 4.49 4.97 46.80 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.