Multiple sequence alignment - TraesCS7A01G172600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G172600 chr7A 100.000 2429 0 0 1 2429 127370057 127372485 0.000000e+00 4486.0
1 TraesCS7A01G172600 chr7A 100.000 229 0 0 2756 2984 127372812 127373040 9.890000e-115 424.0
2 TraesCS7A01G172600 chr7A 72.814 526 94 29 1046 1545 127347930 127348432 1.870000e-27 134.0
3 TraesCS7A01G172600 chr7D 92.332 1578 60 33 686 2221 125887458 125889016 0.000000e+00 2187.0
4 TraesCS7A01G172600 chr7D 91.855 1596 71 31 779 2359 125908790 125910341 0.000000e+00 2172.0
5 TraesCS7A01G172600 chr7D 86.464 362 32 5 233 594 125887065 125887409 6.040000e-102 381.0
6 TraesCS7A01G172600 chr7D 86.567 201 24 3 2783 2981 159910213 159910014 5.010000e-53 219.0
7 TraesCS7A01G172600 chr7D 85.354 198 28 1 2788 2984 592673836 592673639 1.400000e-48 204.0
8 TraesCS7A01G172600 chr7D 85.000 200 29 1 2783 2981 233197816 233198015 5.040000e-48 202.0
9 TraesCS7A01G172600 chr7D 77.642 246 49 6 107 349 611091377 611091619 8.620000e-31 145.0
10 TraesCS7A01G172600 chr7D 91.837 49 4 0 2381 2429 600856390 600856342 5.340000e-08 69.4
11 TraesCS7A01G172600 chr7B 89.791 1724 107 36 652 2330 87125435 87127134 0.000000e+00 2145.0
12 TraesCS7A01G172600 chr7B 81.220 410 50 8 233 636 87125062 87125450 3.740000e-79 305.0
13 TraesCS7A01G172600 chr7B 72.937 521 104 23 1047 1547 87028940 87029443 2.400000e-31 147.0
14 TraesCS7A01G172600 chr7B 91.111 45 2 2 2368 2411 689420644 689420687 3.210000e-05 60.2
15 TraesCS7A01G172600 chr5D 81.329 316 47 9 1108 1413 354941433 354941746 2.300000e-61 246.0
16 TraesCS7A01G172600 chr5D 79.421 311 50 12 1112 1412 355797707 355797401 1.080000e-49 207.0
17 TraesCS7A01G172600 chr5D 85.714 196 27 1 2783 2977 423260805 423260610 3.900000e-49 206.0
18 TraesCS7A01G172600 chr5D 82.609 230 33 6 2756 2984 495895962 495896185 2.350000e-46 196.0
19 TraesCS7A01G172600 chr5D 77.406 239 50 4 113 349 42979955 42979719 4.010000e-29 139.0
20 TraesCS7A01G172600 chr5D 89.362 47 5 0 2381 2427 424690604 424690650 3.210000e-05 60.2
21 TraesCS7A01G172600 chr5A 82.313 294 40 9 1108 1391 457086419 457086710 8.260000e-61 244.0
22 TraesCS7A01G172600 chr5A 79.811 317 50 12 1107 1413 457511684 457511996 5.010000e-53 219.0
23 TraesCS7A01G172600 chr5A 77.686 242 49 4 1181 1418 631858979 631858739 3.100000e-30 143.0
24 TraesCS7A01G172600 chr5A 87.611 113 14 0 1860 1972 564945609 564945721 6.710000e-27 132.0
25 TraesCS7A01G172600 chr5A 78.095 210 22 13 1987 2183 564945956 564946154 8.740000e-21 111.0
26 TraesCS7A01G172600 chr5A 83.838 99 15 1 1107 1205 457880926 457881023 3.170000e-15 93.5
27 TraesCS7A01G172600 chr5A 87.692 65 5 3 2364 2427 567265698 567265636 4.130000e-09 73.1
28 TraesCS7A01G172600 chr5B 80.831 313 48 9 1108 1410 419727582 419727892 4.970000e-58 235.0
29 TraesCS7A01G172600 chr3D 86.473 207 22 5 2780 2982 609643078 609643282 3.870000e-54 222.0
30 TraesCS7A01G172600 chr3D 75.796 314 68 6 96 407 488232436 488232743 5.150000e-33 152.0
31 TraesCS7A01G172600 chr3D 84.848 66 9 1 2362 2427 445089409 445089345 6.900000e-07 65.8
32 TraesCS7A01G172600 chr1D 85.366 205 26 4 2783 2984 456197958 456198161 3.010000e-50 209.0
33 TraesCS7A01G172600 chr4B 84.878 205 28 3 2783 2984 651475629 651475833 1.400000e-48 204.0
34 TraesCS7A01G172600 chr4D 84.772 197 29 1 2789 2984 6923999 6923803 2.350000e-46 196.0
35 TraesCS7A01G172600 chr4D 78.544 261 45 10 107 362 25461193 25461447 8.560000e-36 161.0
36 TraesCS7A01G172600 chr4D 76.078 255 59 2 99 352 448958488 448958235 6.710000e-27 132.0
37 TraesCS7A01G172600 chr4D 82.178 101 17 1 2328 2427 29688852 29688952 5.300000e-13 86.1
38 TraesCS7A01G172600 chr4D 81.176 85 15 1 2328 2411 29757005 29757089 1.920000e-07 67.6
39 TraesCS7A01G172600 chr4A 78.467 274 53 3 96 365 552857350 552857079 1.100000e-39 174.0
40 TraesCS7A01G172600 chr2D 78.243 239 52 0 116 354 140934306 140934068 1.430000e-33 154.0
41 TraesCS7A01G172600 chr2A 76.580 269 63 0 113 381 160193452 160193720 6.660000e-32 148.0
42 TraesCS7A01G172600 chrUn 75.581 258 61 2 96 352 315227345 315227601 3.120000e-25 126.0
43 TraesCS7A01G172600 chr6A 91.667 60 5 0 2368 2427 91975251 91975310 1.910000e-12 84.2
44 TraesCS7A01G172600 chr1A 89.796 49 1 3 2381 2427 416518429 416518383 3.210000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G172600 chr7A 127370057 127373040 2983 False 2455 4486 100.0000 1 2984 2 chr7A.!!$F2 2983
1 TraesCS7A01G172600 chr7D 125908790 125910341 1551 False 2172 2172 91.8550 779 2359 1 chr7D.!!$F1 1580
2 TraesCS7A01G172600 chr7D 125887065 125889016 1951 False 1284 2187 89.3980 233 2221 2 chr7D.!!$F4 1988
3 TraesCS7A01G172600 chr7B 87125062 87127134 2072 False 1225 2145 85.5055 233 2330 2 chr7B.!!$F3 2097

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
620 627 0.035534 TAGCGCCCAGAAGCATTTCA 60.036 50.0 2.29 0.0 35.7 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2362 2449 0.098905 TCTGCAGTCGAGACATACGC 59.901 55.0 14.67 3.52 0.0 4.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.632244 TGATTGATTGACATGTCCACTTG 57.368 39.130 22.85 0.00 0.00 3.16
26 27 5.315348 TGATTGATTGACATGTCCACTTGA 58.685 37.500 22.85 5.49 0.00 3.02
27 28 5.769162 TGATTGATTGACATGTCCACTTGAA 59.231 36.000 22.85 9.74 0.00 2.69
28 29 6.434965 TGATTGATTGACATGTCCACTTGAAT 59.565 34.615 22.85 14.01 0.00 2.57
29 30 5.885230 TGATTGACATGTCCACTTGAATC 57.115 39.130 22.85 20.98 0.00 2.52
30 31 4.701651 TGATTGACATGTCCACTTGAATCC 59.298 41.667 22.85 9.18 0.00 3.01
31 32 4.371624 TTGACATGTCCACTTGAATCCT 57.628 40.909 22.85 0.00 0.00 3.24
32 33 3.942829 TGACATGTCCACTTGAATCCTC 58.057 45.455 22.85 0.00 0.00 3.71
33 34 3.274288 GACATGTCCACTTGAATCCTCC 58.726 50.000 15.31 0.00 0.00 4.30
34 35 2.644299 ACATGTCCACTTGAATCCTCCA 59.356 45.455 0.00 0.00 0.00 3.86
35 36 3.276857 CATGTCCACTTGAATCCTCCAG 58.723 50.000 0.00 0.00 0.00 3.86
36 37 2.619931 TGTCCACTTGAATCCTCCAGA 58.380 47.619 0.00 0.00 0.00 3.86
37 38 2.978978 TGTCCACTTGAATCCTCCAGAA 59.021 45.455 0.00 0.00 0.00 3.02
38 39 3.588842 TGTCCACTTGAATCCTCCAGAAT 59.411 43.478 0.00 0.00 0.00 2.40
39 40 4.782691 TGTCCACTTGAATCCTCCAGAATA 59.217 41.667 0.00 0.00 0.00 1.75
40 41 5.104776 TGTCCACTTGAATCCTCCAGAATAG 60.105 44.000 0.00 0.00 0.00 1.73
41 42 4.133078 CCACTTGAATCCTCCAGAATAGC 58.867 47.826 0.00 0.00 0.00 2.97
42 43 4.384537 CCACTTGAATCCTCCAGAATAGCA 60.385 45.833 0.00 0.00 0.00 3.49
43 44 5.188434 CACTTGAATCCTCCAGAATAGCAA 58.812 41.667 0.00 0.00 0.00 3.91
44 45 5.296283 CACTTGAATCCTCCAGAATAGCAAG 59.704 44.000 0.00 0.00 37.01 4.01
45 46 3.813443 TGAATCCTCCAGAATAGCAAGC 58.187 45.455 0.00 0.00 0.00 4.01
46 47 2.947127 ATCCTCCAGAATAGCAAGCC 57.053 50.000 0.00 0.00 0.00 4.35
47 48 1.583556 TCCTCCAGAATAGCAAGCCA 58.416 50.000 0.00 0.00 0.00 4.75
48 49 1.210478 TCCTCCAGAATAGCAAGCCAC 59.790 52.381 0.00 0.00 0.00 5.01
49 50 1.065199 CCTCCAGAATAGCAAGCCACA 60.065 52.381 0.00 0.00 0.00 4.17
50 51 2.422519 CCTCCAGAATAGCAAGCCACAT 60.423 50.000 0.00 0.00 0.00 3.21
51 52 2.617308 CTCCAGAATAGCAAGCCACATG 59.383 50.000 0.00 0.00 0.00 3.21
52 53 2.239402 TCCAGAATAGCAAGCCACATGA 59.761 45.455 0.00 0.00 0.00 3.07
53 54 3.018856 CCAGAATAGCAAGCCACATGAA 58.981 45.455 0.00 0.00 0.00 2.57
54 55 3.635373 CCAGAATAGCAAGCCACATGAAT 59.365 43.478 0.00 0.00 0.00 2.57
55 56 4.098960 CCAGAATAGCAAGCCACATGAATT 59.901 41.667 0.00 0.00 0.00 2.17
56 57 5.279384 CAGAATAGCAAGCCACATGAATTC 58.721 41.667 0.00 0.00 0.00 2.17
57 58 4.951715 AGAATAGCAAGCCACATGAATTCA 59.048 37.500 11.26 11.26 30.39 2.57
58 59 4.913335 ATAGCAAGCCACATGAATTCAG 57.087 40.909 14.54 8.57 0.00 3.02
59 60 2.799017 AGCAAGCCACATGAATTCAGA 58.201 42.857 14.54 0.00 0.00 3.27
60 61 2.490903 AGCAAGCCACATGAATTCAGAC 59.509 45.455 14.54 1.51 0.00 3.51
61 62 2.490903 GCAAGCCACATGAATTCAGACT 59.509 45.455 14.54 3.77 0.00 3.24
62 63 3.691118 GCAAGCCACATGAATTCAGACTA 59.309 43.478 14.54 0.00 0.00 2.59
63 64 4.337555 GCAAGCCACATGAATTCAGACTAT 59.662 41.667 14.54 0.00 0.00 2.12
64 65 5.528690 GCAAGCCACATGAATTCAGACTATA 59.471 40.000 14.54 0.00 0.00 1.31
65 66 6.206243 GCAAGCCACATGAATTCAGACTATAT 59.794 38.462 14.54 0.00 0.00 0.86
66 67 7.388776 GCAAGCCACATGAATTCAGACTATATA 59.611 37.037 14.54 0.00 0.00 0.86
67 68 9.445878 CAAGCCACATGAATTCAGACTATATAT 57.554 33.333 14.54 0.00 0.00 0.86
69 70 9.445878 AGCCACATGAATTCAGACTATATATTG 57.554 33.333 14.54 5.63 0.00 1.90
70 71 9.224267 GCCACATGAATTCAGACTATATATTGT 57.776 33.333 14.54 6.26 0.00 2.71
79 80 9.797642 ATTCAGACTATATATTGTTTGATGCCA 57.202 29.630 17.07 6.81 29.91 4.92
80 81 8.607441 TCAGACTATATATTGTTTGATGCCAC 57.393 34.615 13.86 0.00 0.00 5.01
81 82 8.210265 TCAGACTATATATTGTTTGATGCCACA 58.790 33.333 13.86 0.00 0.00 4.17
82 83 8.501580 CAGACTATATATTGTTTGATGCCACAG 58.498 37.037 10.91 0.00 0.00 3.66
83 84 8.432013 AGACTATATATTGTTTGATGCCACAGA 58.568 33.333 1.28 0.00 0.00 3.41
84 85 8.978874 ACTATATATTGTTTGATGCCACAGAA 57.021 30.769 0.00 0.00 0.00 3.02
85 86 9.407380 ACTATATATTGTTTGATGCCACAGAAA 57.593 29.630 0.00 0.00 0.00 2.52
108 109 1.900245 AAAACTAACCAATCCGCGGT 58.100 45.000 27.15 10.00 38.85 5.68
110 111 1.900245 AACTAACCAATCCGCGGTTT 58.100 45.000 27.15 21.10 44.46 3.27
111 112 1.161843 ACTAACCAATCCGCGGTTTG 58.838 50.000 32.59 32.59 44.46 2.93
112 113 1.270947 ACTAACCAATCCGCGGTTTGA 60.271 47.619 38.11 23.43 44.46 2.69
113 114 2.014128 CTAACCAATCCGCGGTTTGAT 58.986 47.619 38.11 29.53 44.46 2.57
114 115 0.525761 AACCAATCCGCGGTTTGATG 59.474 50.000 38.11 27.79 44.46 3.07
115 116 1.312371 ACCAATCCGCGGTTTGATGG 61.312 55.000 38.11 30.95 30.53 3.51
116 117 1.312371 CCAATCCGCGGTTTGATGGT 61.312 55.000 38.11 9.96 0.00 3.55
117 118 0.525761 CAATCCGCGGTTTGATGGTT 59.474 50.000 34.96 12.77 0.00 3.67
118 119 1.740585 CAATCCGCGGTTTGATGGTTA 59.259 47.619 34.96 10.60 0.00 2.85
119 120 1.663695 ATCCGCGGTTTGATGGTTAG 58.336 50.000 27.15 0.00 0.00 2.34
120 121 0.391927 TCCGCGGTTTGATGGTTAGG 60.392 55.000 27.15 0.00 0.00 2.69
121 122 0.391927 CCGCGGTTTGATGGTTAGGA 60.392 55.000 19.50 0.00 0.00 2.94
122 123 1.006832 CGCGGTTTGATGGTTAGGAG 58.993 55.000 0.00 0.00 0.00 3.69
123 124 1.404986 CGCGGTTTGATGGTTAGGAGA 60.405 52.381 0.00 0.00 0.00 3.71
124 125 2.706890 GCGGTTTGATGGTTAGGAGAA 58.293 47.619 0.00 0.00 0.00 2.87
125 126 2.418976 GCGGTTTGATGGTTAGGAGAAC 59.581 50.000 0.00 0.00 0.00 3.01
126 127 3.670625 CGGTTTGATGGTTAGGAGAACA 58.329 45.455 0.00 0.00 0.00 3.18
127 128 4.069304 CGGTTTGATGGTTAGGAGAACAA 58.931 43.478 0.00 0.00 0.00 2.83
128 129 4.700213 CGGTTTGATGGTTAGGAGAACAAT 59.300 41.667 0.00 0.00 0.00 2.71
129 130 5.391950 CGGTTTGATGGTTAGGAGAACAATG 60.392 44.000 0.00 0.00 0.00 2.82
130 131 5.105756 GGTTTGATGGTTAGGAGAACAATGG 60.106 44.000 0.00 0.00 0.00 3.16
131 132 4.927267 TGATGGTTAGGAGAACAATGGT 57.073 40.909 0.00 0.00 0.00 3.55
132 133 6.381498 TTGATGGTTAGGAGAACAATGGTA 57.619 37.500 0.00 0.00 0.00 3.25
133 134 6.575244 TGATGGTTAGGAGAACAATGGTAT 57.425 37.500 0.00 0.00 0.00 2.73
134 135 6.591935 TGATGGTTAGGAGAACAATGGTATC 58.408 40.000 0.00 0.00 0.00 2.24
135 136 5.367945 TGGTTAGGAGAACAATGGTATCC 57.632 43.478 3.29 3.29 34.66 2.59
136 137 5.036916 TGGTTAGGAGAACAATGGTATCCT 58.963 41.667 19.16 19.16 42.74 3.24
137 138 5.491078 TGGTTAGGAGAACAATGGTATCCTT 59.509 40.000 20.40 4.58 41.30 3.36
138 139 6.674861 TGGTTAGGAGAACAATGGTATCCTTA 59.325 38.462 20.40 8.29 41.30 2.69
139 140 7.147549 TGGTTAGGAGAACAATGGTATCCTTAG 60.148 40.741 20.40 0.00 41.30 2.18
140 141 7.147532 GGTTAGGAGAACAATGGTATCCTTAGT 60.148 40.741 20.40 0.00 41.30 2.24
141 142 6.487299 AGGAGAACAATGGTATCCTTAGTC 57.513 41.667 8.94 0.00 39.23 2.59
142 143 5.367060 AGGAGAACAATGGTATCCTTAGTCC 59.633 44.000 8.94 0.00 39.23 3.85
143 144 5.130477 GGAGAACAATGGTATCCTTAGTCCA 59.870 44.000 4.43 0.00 32.73 4.02
144 145 6.183361 GGAGAACAATGGTATCCTTAGTCCAT 60.183 42.308 4.43 0.00 41.68 3.41
145 146 6.831976 AGAACAATGGTATCCTTAGTCCATC 58.168 40.000 0.00 0.00 39.39 3.51
146 147 6.386927 AGAACAATGGTATCCTTAGTCCATCA 59.613 38.462 0.00 0.00 39.39 3.07
147 148 6.179906 ACAATGGTATCCTTAGTCCATCAG 57.820 41.667 0.00 0.00 39.39 2.90
148 149 5.905331 ACAATGGTATCCTTAGTCCATCAGA 59.095 40.000 0.00 0.00 39.39 3.27
149 150 6.042552 ACAATGGTATCCTTAGTCCATCAGAG 59.957 42.308 0.00 0.00 39.39 3.35
150 151 5.144159 TGGTATCCTTAGTCCATCAGAGT 57.856 43.478 0.00 0.00 0.00 3.24
151 152 5.529289 TGGTATCCTTAGTCCATCAGAGTT 58.471 41.667 0.00 0.00 0.00 3.01
152 153 5.598830 TGGTATCCTTAGTCCATCAGAGTTC 59.401 44.000 0.00 0.00 0.00 3.01
153 154 5.598830 GGTATCCTTAGTCCATCAGAGTTCA 59.401 44.000 0.00 0.00 0.00 3.18
154 155 6.098409 GGTATCCTTAGTCCATCAGAGTTCAA 59.902 42.308 0.00 0.00 0.00 2.69
155 156 5.667539 TCCTTAGTCCATCAGAGTTCAAG 57.332 43.478 0.00 0.00 0.00 3.02
156 157 5.087323 TCCTTAGTCCATCAGAGTTCAAGT 58.913 41.667 0.00 0.00 0.00 3.16
157 158 5.186021 TCCTTAGTCCATCAGAGTTCAAGTC 59.814 44.000 0.00 0.00 0.00 3.01
158 159 3.971245 AGTCCATCAGAGTTCAAGTCC 57.029 47.619 0.00 0.00 0.00 3.85
159 160 3.515562 AGTCCATCAGAGTTCAAGTCCT 58.484 45.455 0.00 0.00 0.00 3.85
160 161 4.678256 AGTCCATCAGAGTTCAAGTCCTA 58.322 43.478 0.00 0.00 0.00 2.94
161 162 4.709397 AGTCCATCAGAGTTCAAGTCCTAG 59.291 45.833 0.00 0.00 0.00 3.02
162 163 4.707448 GTCCATCAGAGTTCAAGTCCTAGA 59.293 45.833 0.00 0.00 0.00 2.43
163 164 4.707448 TCCATCAGAGTTCAAGTCCTAGAC 59.293 45.833 0.00 0.00 0.00 2.59
164 165 4.709397 CCATCAGAGTTCAAGTCCTAGACT 59.291 45.833 0.00 0.00 45.64 3.24
176 177 4.764172 AGTCCTAGACTTGACATTGATGC 58.236 43.478 0.00 0.00 40.28 3.91
177 178 4.469227 AGTCCTAGACTTGACATTGATGCT 59.531 41.667 0.00 0.00 40.28 3.79
178 179 4.808364 GTCCTAGACTTGACATTGATGCTC 59.192 45.833 0.00 0.00 0.00 4.26
179 180 3.801050 CCTAGACTTGACATTGATGCTCG 59.199 47.826 0.00 0.00 0.00 5.03
180 181 3.325293 AGACTTGACATTGATGCTCGT 57.675 42.857 0.00 0.00 0.00 4.18
181 182 4.456280 AGACTTGACATTGATGCTCGTA 57.544 40.909 0.00 0.00 0.00 3.43
182 183 5.016051 AGACTTGACATTGATGCTCGTAT 57.984 39.130 0.00 0.00 0.00 3.06
183 184 5.423015 AGACTTGACATTGATGCTCGTATT 58.577 37.500 0.00 0.00 0.00 1.89
184 185 5.877012 AGACTTGACATTGATGCTCGTATTT 59.123 36.000 0.00 0.00 0.00 1.40
185 186 6.372659 AGACTTGACATTGATGCTCGTATTTT 59.627 34.615 0.00 0.00 0.00 1.82
186 187 6.913170 ACTTGACATTGATGCTCGTATTTTT 58.087 32.000 0.00 0.00 0.00 1.94
210 211 9.932699 TTTTTGAATTTATTTGACGTCTTACGA 57.067 25.926 17.92 0.00 46.05 3.43
211 212 8.922738 TTTGAATTTATTTGACGTCTTACGAC 57.077 30.769 17.92 0.46 46.05 4.34
228 229 3.168271 CGATGTGCGTTCAGTGGG 58.832 61.111 0.00 0.00 34.64 4.61
229 230 1.374125 CGATGTGCGTTCAGTGGGA 60.374 57.895 0.00 0.00 34.64 4.37
230 231 0.740868 CGATGTGCGTTCAGTGGGAT 60.741 55.000 0.00 0.00 34.64 3.85
231 232 0.729116 GATGTGCGTTCAGTGGGATG 59.271 55.000 0.00 0.00 0.00 3.51
232 233 0.324614 ATGTGCGTTCAGTGGGATGA 59.675 50.000 0.00 0.00 0.00 2.92
233 234 0.320683 TGTGCGTTCAGTGGGATGAG 60.321 55.000 0.00 0.00 0.00 2.90
234 235 0.037326 GTGCGTTCAGTGGGATGAGA 60.037 55.000 0.00 0.00 0.00 3.27
235 236 0.037326 TGCGTTCAGTGGGATGAGAC 60.037 55.000 0.00 0.00 0.00 3.36
236 237 0.037326 GCGTTCAGTGGGATGAGACA 60.037 55.000 0.00 0.00 0.00 3.41
252 253 6.206243 GGATGAGACATTCTGGTTGATTATGG 59.794 42.308 0.00 0.00 0.00 2.74
259 260 2.158957 TCTGGTTGATTATGGAGGCGTC 60.159 50.000 0.00 0.00 0.00 5.19
283 284 3.914364 GTGGCGACTTCATCAATTTGAAC 59.086 43.478 2.68 0.00 32.39 3.18
319 320 1.680735 AGTCTCTCGGACATGCTCATC 59.319 52.381 0.00 0.00 46.72 2.92
320 321 1.680735 GTCTCTCGGACATGCTCATCT 59.319 52.381 0.00 0.00 43.94 2.90
326 327 2.965147 TCGGACATGCTCATCTGGATAA 59.035 45.455 0.00 0.00 0.00 1.75
327 328 3.006217 TCGGACATGCTCATCTGGATAAG 59.994 47.826 0.00 0.00 0.00 1.73
358 359 3.708890 CGTGCGTTTATAGGGATGTGTA 58.291 45.455 0.00 0.00 0.00 2.90
386 387 3.821841 CATATGCATGAGCGTCTACGTA 58.178 45.455 10.16 0.00 46.23 3.57
387 388 2.121116 ATGCATGAGCGTCTACGTAC 57.879 50.000 0.00 0.00 46.23 3.67
389 390 0.247974 GCATGAGCGTCTACGTACGT 60.248 55.000 25.98 25.98 44.64 3.57
392 393 1.996292 TGAGCGTCTACGTACGTACT 58.004 50.000 23.60 18.35 44.64 2.73
472 474 7.307493 GGAATTTTCCATCCAAATAAAGTGC 57.693 36.000 4.43 0.00 46.76 4.40
480 482 5.762218 CCATCCAAATAAAGTGCAAACCAAA 59.238 36.000 0.00 0.00 0.00 3.28
489 493 8.729805 ATAAAGTGCAAACCAAATCTTTGAAA 57.270 26.923 4.25 0.00 40.55 2.69
517 521 6.677781 TTCTAAGCATTCAAATCCTAACGG 57.322 37.500 0.00 0.00 0.00 4.44
595 600 1.378514 TCCCGAATCAAAGCAGCCC 60.379 57.895 0.00 0.00 0.00 5.19
603 608 4.391216 CGAATCAAAGCAGCCCTGATATAG 59.609 45.833 7.15 0.35 0.00 1.31
604 609 3.131709 TCAAAGCAGCCCTGATATAGC 57.868 47.619 0.00 0.00 0.00 2.97
620 627 0.035534 TAGCGCCCAGAAGCATTTCA 60.036 50.000 2.29 0.00 35.70 2.69
621 628 1.153958 GCGCCCAGAAGCATTTCAC 60.154 57.895 0.00 0.00 35.70 3.18
622 629 1.589716 GCGCCCAGAAGCATTTCACT 61.590 55.000 0.00 0.00 35.70 3.41
623 630 1.737838 CGCCCAGAAGCATTTCACTA 58.262 50.000 0.00 0.00 35.70 2.74
624 631 1.667724 CGCCCAGAAGCATTTCACTAG 59.332 52.381 0.00 0.00 35.70 2.57
625 632 2.019984 GCCCAGAAGCATTTCACTAGG 58.980 52.381 0.00 0.00 35.70 3.02
626 633 2.619074 GCCCAGAAGCATTTCACTAGGT 60.619 50.000 0.00 0.00 35.70 3.08
627 634 3.274288 CCCAGAAGCATTTCACTAGGTC 58.726 50.000 0.00 0.00 35.70 3.85
628 635 3.054802 CCCAGAAGCATTTCACTAGGTCT 60.055 47.826 0.00 0.00 35.70 3.85
629 636 4.566488 CCCAGAAGCATTTCACTAGGTCTT 60.566 45.833 0.00 0.00 35.70 3.01
630 637 4.633565 CCAGAAGCATTTCACTAGGTCTTC 59.366 45.833 0.00 0.00 35.70 2.87
631 638 5.486526 CAGAAGCATTTCACTAGGTCTTCT 58.513 41.667 0.00 0.00 39.24 2.85
632 639 6.351371 CCAGAAGCATTTCACTAGGTCTTCTA 60.351 42.308 0.00 0.00 37.33 2.10
634 641 6.665680 AGAAGCATTTCACTAGGTCTTCTAGA 59.334 38.462 7.00 0.00 46.30 2.43
635 642 6.859112 AGCATTTCACTAGGTCTTCTAGAA 57.141 37.500 4.81 4.81 46.48 2.10
636 643 7.430760 AGCATTTCACTAGGTCTTCTAGAAT 57.569 36.000 5.44 0.00 46.48 2.40
637 644 8.540507 AGCATTTCACTAGGTCTTCTAGAATA 57.459 34.615 5.44 0.00 46.48 1.75
638 645 9.153479 AGCATTTCACTAGGTCTTCTAGAATAT 57.847 33.333 5.44 0.00 46.48 1.28
639 646 9.771534 GCATTTCACTAGGTCTTCTAGAATATT 57.228 33.333 5.44 0.00 46.48 1.28
643 650 9.922477 TTCACTAGGTCTTCTAGAATATTCTCA 57.078 33.333 21.17 7.06 46.48 3.27
644 651 9.922477 TCACTAGGTCTTCTAGAATATTCTCAA 57.078 33.333 21.17 13.84 46.48 3.02
746 767 2.599597 CCCCCTCTTGATGCCCAG 59.400 66.667 0.00 0.00 0.00 4.45
747 768 2.311854 CCCCCTCTTGATGCCCAGT 61.312 63.158 0.00 0.00 0.00 4.00
748 769 1.693640 CCCCTCTTGATGCCCAGTT 59.306 57.895 0.00 0.00 0.00 3.16
749 770 0.682209 CCCCTCTTGATGCCCAGTTG 60.682 60.000 0.00 0.00 0.00 3.16
750 771 1.318158 CCCTCTTGATGCCCAGTTGC 61.318 60.000 0.00 0.00 0.00 4.17
751 772 1.318158 CCTCTTGATGCCCAGTTGCC 61.318 60.000 0.00 0.00 0.00 4.52
752 773 1.304381 TCTTGATGCCCAGTTGCCC 60.304 57.895 0.00 0.00 0.00 5.36
753 774 1.607178 CTTGATGCCCAGTTGCCCA 60.607 57.895 0.00 0.00 0.00 5.36
754 775 1.880819 CTTGATGCCCAGTTGCCCAC 61.881 60.000 0.00 0.00 0.00 4.61
755 776 2.283101 GATGCCCAGTTGCCCACA 60.283 61.111 0.00 0.00 0.00 4.17
756 777 1.907807 GATGCCCAGTTGCCCACAA 60.908 57.895 0.00 0.00 0.00 3.33
757 778 1.229272 ATGCCCAGTTGCCCACAAT 60.229 52.632 0.00 0.00 38.27 2.71
758 779 1.546589 ATGCCCAGTTGCCCACAATG 61.547 55.000 0.00 0.00 38.27 2.82
771 812 2.502947 CCCACAATGATCTCCACTCTCA 59.497 50.000 0.00 0.00 0.00 3.27
912 966 1.244697 ATAGTGCCGGCGATCGAGAT 61.245 55.000 23.90 4.94 42.43 2.75
915 969 2.735100 GCCGGCGATCGAGATTCC 60.735 66.667 21.57 9.07 42.43 3.01
921 975 0.665972 GCGATCGAGATTCCAGAGCC 60.666 60.000 21.57 0.00 0.00 4.70
924 978 2.478831 GATCGAGATTCCAGAGCCAAC 58.521 52.381 0.00 0.00 0.00 3.77
927 981 0.106967 GAGATTCCAGAGCCAACCCC 60.107 60.000 0.00 0.00 0.00 4.95
946 1000 4.400109 GGAGCGACGTCACGAGCA 62.400 66.667 17.16 0.00 36.81 4.26
950 1004 3.470567 CGACGTCACGAGCAAGCC 61.471 66.667 17.16 0.00 35.09 4.35
951 1005 3.112709 GACGTCACGAGCAAGCCC 61.113 66.667 11.55 0.00 0.00 5.19
955 1017 4.680237 TCACGAGCAAGCCCACGG 62.680 66.667 0.00 0.00 0.00 4.94
956 1018 4.680237 CACGAGCAAGCCCACGGA 62.680 66.667 0.00 0.00 0.00 4.69
971 1033 3.317795 GGACGAATACGCGACGCC 61.318 66.667 15.93 13.64 43.96 5.68
2010 2090 3.357079 CGCGCCTGCAAAGGAAGT 61.357 61.111 0.00 0.00 42.97 3.01
2014 2095 1.523758 CGCCTGCAAAGGAAGTAAGT 58.476 50.000 0.00 0.00 0.00 2.24
2024 2105 4.426736 AAGGAAGTAAGTTTCCCGTGAA 57.573 40.909 1.35 0.00 46.38 3.18
2025 2106 4.635699 AGGAAGTAAGTTTCCCGTGAAT 57.364 40.909 1.35 0.00 46.38 2.57
2026 2107 4.576879 AGGAAGTAAGTTTCCCGTGAATC 58.423 43.478 1.35 0.00 46.38 2.52
2027 2108 3.688185 GGAAGTAAGTTTCCCGTGAATCC 59.312 47.826 0.00 0.00 40.64 3.01
2028 2109 2.968675 AGTAAGTTTCCCGTGAATCCG 58.031 47.619 0.00 0.00 0.00 4.18
2030 2111 1.519408 AAGTTTCCCGTGAATCCGTG 58.481 50.000 0.00 0.00 0.00 4.94
2033 2114 1.396996 GTTTCCCGTGAATCCGTGATG 59.603 52.381 0.00 0.00 0.00 3.07
2082 2163 4.183101 CTCTGTTTGAGCTTGAGAGATCC 58.817 47.826 0.00 0.00 37.51 3.36
2093 2177 4.824537 GCTTGAGAGATCCCCCTTTATTTC 59.175 45.833 0.00 0.00 0.00 2.17
2146 2231 2.361119 CCGACCGATGTTTATCTCCTCA 59.639 50.000 0.00 0.00 0.00 3.86
2147 2232 3.551046 CCGACCGATGTTTATCTCCTCAG 60.551 52.174 0.00 0.00 0.00 3.35
2162 2247 1.207089 CCTCAGTACCATGGCGAAGAA 59.793 52.381 13.04 0.00 0.00 2.52
2168 2253 2.717639 ACCATGGCGAAGAAAGCTAT 57.282 45.000 13.04 0.00 36.21 2.97
2169 2254 3.838244 ACCATGGCGAAGAAAGCTATA 57.162 42.857 13.04 0.00 34.01 1.31
2221 2306 7.428826 ACTTGTTGTTTCAATCATCTTTCCTC 58.571 34.615 0.00 0.00 0.00 3.71
2296 2383 8.815141 TTGTGAAAAGTTATGGATCATGTTTG 57.185 30.769 0.00 0.00 0.00 2.93
2316 2403 3.815809 TGATGTTTTGAGGAGAAACCGT 58.184 40.909 0.00 0.00 44.74 4.83
2323 2410 6.428771 TGTTTTGAGGAGAAACCGTTATTAGG 59.571 38.462 0.00 0.00 44.74 2.69
2339 2426 4.526438 ATTAGGCTTGTAAGGGCATCTT 57.474 40.909 0.00 0.00 39.40 2.40
2344 2431 2.819608 GCTTGTAAGGGCATCTTCAACA 59.180 45.455 0.00 0.00 36.93 3.33
2347 2434 1.737793 GTAAGGGCATCTTCAACACCG 59.262 52.381 0.00 0.00 36.93 4.94
2352 2439 1.305930 GCATCTTCAACACCGACCCC 61.306 60.000 0.00 0.00 0.00 4.95
2353 2440 0.036164 CATCTTCAACACCGACCCCA 59.964 55.000 0.00 0.00 0.00 4.96
2356 2443 0.666374 CTTCAACACCGACCCCAAAC 59.334 55.000 0.00 0.00 0.00 2.93
2358 2445 2.203238 AACACCGACCCCAAACCG 60.203 61.111 0.00 0.00 0.00 4.44
2359 2446 3.046536 AACACCGACCCCAAACCGT 62.047 57.895 0.00 0.00 0.00 4.83
2360 2447 2.203238 CACCGACCCCAAACCGTT 60.203 61.111 0.00 0.00 0.00 4.44
2361 2448 2.111669 ACCGACCCCAAACCGTTC 59.888 61.111 0.00 0.00 0.00 3.95
2362 2449 3.045492 CCGACCCCAAACCGTTCG 61.045 66.667 0.00 0.00 0.00 3.95
2363 2450 3.719144 CGACCCCAAACCGTTCGC 61.719 66.667 0.00 0.00 0.00 4.70
2364 2451 3.719144 GACCCCAAACCGTTCGCG 61.719 66.667 0.00 0.00 40.93 5.87
2365 2452 4.550697 ACCCCAAACCGTTCGCGT 62.551 61.111 5.77 0.00 39.32 6.01
2366 2453 2.357275 CCCCAAACCGTTCGCGTA 60.357 61.111 5.77 0.00 39.32 4.42
2367 2454 1.742510 CCCCAAACCGTTCGCGTAT 60.743 57.895 5.77 0.00 39.32 3.06
2368 2455 1.422269 CCCAAACCGTTCGCGTATG 59.578 57.895 5.77 0.88 39.32 2.39
2369 2456 1.293267 CCCAAACCGTTCGCGTATGT 61.293 55.000 5.77 0.00 39.32 2.29
2370 2457 0.094046 CCAAACCGTTCGCGTATGTC 59.906 55.000 5.77 0.00 39.32 3.06
2371 2458 1.065358 CAAACCGTTCGCGTATGTCT 58.935 50.000 5.77 0.00 39.32 3.41
2372 2459 1.058695 CAAACCGTTCGCGTATGTCTC 59.941 52.381 5.77 0.00 39.32 3.36
2373 2460 0.795735 AACCGTTCGCGTATGTCTCG 60.796 55.000 5.77 0.00 39.32 4.04
2374 2461 1.061411 CCGTTCGCGTATGTCTCGA 59.939 57.895 5.77 0.00 39.32 4.04
2375 2462 1.192436 CCGTTCGCGTATGTCTCGAC 61.192 60.000 5.77 0.00 39.32 4.20
2376 2463 0.247576 CGTTCGCGTATGTCTCGACT 60.248 55.000 5.77 0.00 32.93 4.18
2377 2464 1.181001 GTTCGCGTATGTCTCGACTG 58.819 55.000 5.77 0.00 32.93 3.51
2378 2465 0.522705 TTCGCGTATGTCTCGACTGC 60.523 55.000 5.77 0.00 32.93 4.40
2379 2466 1.226295 CGCGTATGTCTCGACTGCA 60.226 57.895 0.00 0.00 0.00 4.41
2380 2467 1.196749 CGCGTATGTCTCGACTGCAG 61.197 60.000 13.48 13.48 0.00 4.41
2381 2468 0.098905 GCGTATGTCTCGACTGCAGA 59.901 55.000 23.35 0.00 0.00 4.26
2382 2469 1.467543 GCGTATGTCTCGACTGCAGAA 60.468 52.381 23.35 4.30 0.00 3.02
2383 2470 2.445316 CGTATGTCTCGACTGCAGAAG 58.555 52.381 23.35 14.36 0.00 2.85
2384 2471 2.189342 GTATGTCTCGACTGCAGAAGC 58.811 52.381 23.35 8.31 42.57 3.86
2385 2472 0.108424 ATGTCTCGACTGCAGAAGCC 60.108 55.000 23.35 5.18 41.13 4.35
2386 2473 1.290324 GTCTCGACTGCAGAAGCCA 59.710 57.895 23.35 0.00 41.13 4.75
2387 2474 0.108424 GTCTCGACTGCAGAAGCCAT 60.108 55.000 23.35 0.00 41.13 4.40
2388 2475 0.174389 TCTCGACTGCAGAAGCCATC 59.826 55.000 23.35 5.08 41.13 3.51
2389 2476 0.809241 CTCGACTGCAGAAGCCATCC 60.809 60.000 23.35 0.00 41.13 3.51
2390 2477 1.078918 CGACTGCAGAAGCCATCCA 60.079 57.895 23.35 0.00 41.13 3.41
2391 2478 0.674581 CGACTGCAGAAGCCATCCAA 60.675 55.000 23.35 0.00 41.13 3.53
2392 2479 0.807496 GACTGCAGAAGCCATCCAAC 59.193 55.000 23.35 0.00 41.13 3.77
2393 2480 0.111061 ACTGCAGAAGCCATCCAACA 59.889 50.000 23.35 0.00 41.13 3.33
2394 2481 0.524862 CTGCAGAAGCCATCCAACAC 59.475 55.000 8.42 0.00 41.13 3.32
2395 2482 1.236616 TGCAGAAGCCATCCAACACG 61.237 55.000 0.00 0.00 41.13 4.49
2396 2483 1.926511 GCAGAAGCCATCCAACACGG 61.927 60.000 0.00 0.00 33.58 4.94
2397 2484 0.606401 CAGAAGCCATCCAACACGGT 60.606 55.000 0.00 0.00 35.57 4.83
2398 2485 0.321653 AGAAGCCATCCAACACGGTC 60.322 55.000 0.00 0.00 35.57 4.79
2399 2486 1.303317 AAGCCATCCAACACGGTCC 60.303 57.895 0.00 0.00 35.57 4.46
2400 2487 1.779061 AAGCCATCCAACACGGTCCT 61.779 55.000 0.00 0.00 35.57 3.85
2401 2488 2.040544 GCCATCCAACACGGTCCTG 61.041 63.158 0.00 0.00 35.57 3.86
2402 2489 1.374947 CCATCCAACACGGTCCTGT 59.625 57.895 0.00 0.00 35.57 4.00
2403 2490 0.611200 CCATCCAACACGGTCCTGTA 59.389 55.000 0.00 0.00 35.57 2.74
2404 2491 1.209504 CCATCCAACACGGTCCTGTAT 59.790 52.381 0.00 0.00 35.57 2.29
2405 2492 2.550978 CATCCAACACGGTCCTGTATC 58.449 52.381 0.00 0.00 35.57 2.24
2406 2493 0.528924 TCCAACACGGTCCTGTATCG 59.471 55.000 0.00 0.00 37.86 2.92
2407 2494 0.459585 CCAACACGGTCCTGTATCGG 60.460 60.000 0.00 0.00 35.41 4.18
2408 2495 0.245539 CAACACGGTCCTGTATCGGT 59.754 55.000 0.00 0.00 35.41 4.69
2409 2496 0.529378 AACACGGTCCTGTATCGGTC 59.471 55.000 0.00 0.00 35.41 4.79
2410 2497 1.318158 ACACGGTCCTGTATCGGTCC 61.318 60.000 0.00 0.00 35.41 4.46
2411 2498 1.000521 ACGGTCCTGTATCGGTCCA 60.001 57.895 0.00 0.00 35.41 4.02
2412 2499 1.035932 ACGGTCCTGTATCGGTCCAG 61.036 60.000 0.00 0.00 35.41 3.86
2414 2501 1.400530 GGTCCTGTATCGGTCCAGGG 61.401 65.000 7.54 0.00 46.75 4.45
2415 2502 1.760875 TCCTGTATCGGTCCAGGGC 60.761 63.158 7.54 0.00 46.75 5.19
2416 2503 2.063979 CCTGTATCGGTCCAGGGCA 61.064 63.158 0.00 0.00 43.74 5.36
2417 2504 1.622607 CCTGTATCGGTCCAGGGCAA 61.623 60.000 0.00 0.00 43.74 4.52
2418 2505 0.179073 CTGTATCGGTCCAGGGCAAG 60.179 60.000 0.00 0.00 0.00 4.01
2419 2506 1.146263 GTATCGGTCCAGGGCAAGG 59.854 63.158 0.00 0.00 0.00 3.61
2420 2507 1.306654 TATCGGTCCAGGGCAAGGT 60.307 57.895 0.00 0.00 0.00 3.50
2421 2508 1.335132 TATCGGTCCAGGGCAAGGTC 61.335 60.000 0.00 0.00 0.00 3.85
2422 2509 4.410400 CGGTCCAGGGCAAGGTCC 62.410 72.222 0.00 1.60 0.00 4.46
2423 2510 4.410400 GGTCCAGGGCAAGGTCCG 62.410 72.222 0.00 0.00 29.39 4.79
2424 2511 4.410400 GTCCAGGGCAAGGTCCGG 62.410 72.222 0.00 0.00 29.39 5.14
2425 2512 4.649705 TCCAGGGCAAGGTCCGGA 62.650 66.667 0.00 0.00 30.36 5.14
2426 2513 4.410400 CCAGGGCAAGGTCCGGAC 62.410 72.222 27.04 27.04 29.39 4.79
2427 2514 3.636231 CAGGGCAAGGTCCGGACA 61.636 66.667 34.40 0.00 29.39 4.02
2428 2515 2.610859 AGGGCAAGGTCCGGACAT 60.611 61.111 34.40 27.09 29.39 3.06
2772 2859 3.930504 ACGTAGGACCCCGACATC 58.069 61.111 8.06 0.00 0.00 3.06
2773 2860 1.755783 ACGTAGGACCCCGACATCC 60.756 63.158 8.06 0.00 34.98 3.51
2774 2861 2.496291 CGTAGGACCCCGACATCCC 61.496 68.421 0.00 0.00 35.38 3.85
2775 2862 1.382146 GTAGGACCCCGACATCCCA 60.382 63.158 0.00 0.00 35.38 4.37
2776 2863 1.075525 TAGGACCCCGACATCCCAG 60.076 63.158 0.00 0.00 35.38 4.45
2777 2864 2.599139 TAGGACCCCGACATCCCAGG 62.599 65.000 0.00 0.00 35.38 4.45
2778 2865 2.365105 GACCCCGACATCCCAGGA 60.365 66.667 0.00 0.00 0.00 3.86
2779 2866 2.687566 ACCCCGACATCCCAGGAC 60.688 66.667 0.00 0.00 0.00 3.85
2780 2867 2.365635 CCCCGACATCCCAGGACT 60.366 66.667 0.00 0.00 0.00 3.85
2781 2868 1.075525 CCCCGACATCCCAGGACTA 60.076 63.158 0.00 0.00 0.00 2.59
2782 2869 1.400530 CCCCGACATCCCAGGACTAC 61.401 65.000 0.00 0.00 0.00 2.73
2783 2870 1.400530 CCCGACATCCCAGGACTACC 61.401 65.000 0.00 0.00 0.00 3.18
2784 2871 1.400530 CCGACATCCCAGGACTACCC 61.401 65.000 0.00 0.00 36.73 3.69
2785 2872 1.735376 CGACATCCCAGGACTACCCG 61.735 65.000 0.00 0.00 40.87 5.28
2786 2873 0.396695 GACATCCCAGGACTACCCGA 60.397 60.000 0.00 0.00 40.87 5.14
2787 2874 0.264955 ACATCCCAGGACTACCCGAT 59.735 55.000 0.00 0.00 40.87 4.18
2788 2875 0.969894 CATCCCAGGACTACCCGATC 59.030 60.000 0.00 0.00 40.87 3.69
2789 2876 0.178929 ATCCCAGGACTACCCGATCC 60.179 60.000 0.00 0.00 40.87 3.36
2790 2877 1.837499 CCCAGGACTACCCGATCCC 60.837 68.421 0.00 0.00 40.87 3.85
2791 2878 1.075525 CCAGGACTACCCGATCCCA 60.076 63.158 0.00 0.00 40.87 4.37
2792 2879 0.471971 CCAGGACTACCCGATCCCAT 60.472 60.000 0.00 0.00 40.87 4.00
2793 2880 1.424638 CAGGACTACCCGATCCCATT 58.575 55.000 0.00 0.00 40.87 3.16
2794 2881 1.768870 CAGGACTACCCGATCCCATTT 59.231 52.381 0.00 0.00 40.87 2.32
2795 2882 2.047830 AGGACTACCCGATCCCATTTC 58.952 52.381 0.00 0.00 40.87 2.17
2796 2883 1.071857 GGACTACCCGATCCCATTTCC 59.928 57.143 0.00 0.00 0.00 3.13
2797 2884 2.047830 GACTACCCGATCCCATTTCCT 58.952 52.381 0.00 0.00 0.00 3.36
2798 2885 2.438392 GACTACCCGATCCCATTTCCTT 59.562 50.000 0.00 0.00 0.00 3.36
2799 2886 2.438392 ACTACCCGATCCCATTTCCTTC 59.562 50.000 0.00 0.00 0.00 3.46
2800 2887 0.551396 ACCCGATCCCATTTCCTTCC 59.449 55.000 0.00 0.00 0.00 3.46
2801 2888 0.550914 CCCGATCCCATTTCCTTCCA 59.449 55.000 0.00 0.00 0.00 3.53
2802 2889 1.680338 CCGATCCCATTTCCTTCCAC 58.320 55.000 0.00 0.00 0.00 4.02
2803 2890 1.064758 CCGATCCCATTTCCTTCCACA 60.065 52.381 0.00 0.00 0.00 4.17
2804 2891 2.620367 CCGATCCCATTTCCTTCCACAA 60.620 50.000 0.00 0.00 0.00 3.33
2805 2892 2.423538 CGATCCCATTTCCTTCCACAAC 59.576 50.000 0.00 0.00 0.00 3.32
2806 2893 1.904287 TCCCATTTCCTTCCACAACG 58.096 50.000 0.00 0.00 0.00 4.10
2807 2894 1.144093 TCCCATTTCCTTCCACAACGT 59.856 47.619 0.00 0.00 0.00 3.99
2808 2895 1.539827 CCCATTTCCTTCCACAACGTC 59.460 52.381 0.00 0.00 0.00 4.34
2809 2896 1.539827 CCATTTCCTTCCACAACGTCC 59.460 52.381 0.00 0.00 0.00 4.79
2810 2897 1.539827 CATTTCCTTCCACAACGTCCC 59.460 52.381 0.00 0.00 0.00 4.46
2811 2898 0.841289 TTTCCTTCCACAACGTCCCT 59.159 50.000 0.00 0.00 0.00 4.20
2812 2899 0.841289 TTCCTTCCACAACGTCCCTT 59.159 50.000 0.00 0.00 0.00 3.95
2813 2900 0.395312 TCCTTCCACAACGTCCCTTC 59.605 55.000 0.00 0.00 0.00 3.46
2814 2901 0.396811 CCTTCCACAACGTCCCTTCT 59.603 55.000 0.00 0.00 0.00 2.85
2815 2902 1.608283 CCTTCCACAACGTCCCTTCTC 60.608 57.143 0.00 0.00 0.00 2.87
2816 2903 0.395312 TTCCACAACGTCCCTTCTCC 59.605 55.000 0.00 0.00 0.00 3.71
2817 2904 0.471211 TCCACAACGTCCCTTCTCCT 60.471 55.000 0.00 0.00 0.00 3.69
2818 2905 0.037232 CCACAACGTCCCTTCTCCTC 60.037 60.000 0.00 0.00 0.00 3.71
2819 2906 0.037232 CACAACGTCCCTTCTCCTCC 60.037 60.000 0.00 0.00 0.00 4.30
2820 2907 0.178929 ACAACGTCCCTTCTCCTCCT 60.179 55.000 0.00 0.00 0.00 3.69
2821 2908 0.977395 CAACGTCCCTTCTCCTCCTT 59.023 55.000 0.00 0.00 0.00 3.36
2822 2909 2.176889 CAACGTCCCTTCTCCTCCTTA 58.823 52.381 0.00 0.00 0.00 2.69
2823 2910 1.849977 ACGTCCCTTCTCCTCCTTAC 58.150 55.000 0.00 0.00 0.00 2.34
2824 2911 1.358445 ACGTCCCTTCTCCTCCTTACT 59.642 52.381 0.00 0.00 0.00 2.24
2825 2912 2.225318 ACGTCCCTTCTCCTCCTTACTT 60.225 50.000 0.00 0.00 0.00 2.24
2826 2913 2.832733 CGTCCCTTCTCCTCCTTACTTT 59.167 50.000 0.00 0.00 0.00 2.66
2827 2914 3.368531 CGTCCCTTCTCCTCCTTACTTTG 60.369 52.174 0.00 0.00 0.00 2.77
2828 2915 2.572104 TCCCTTCTCCTCCTTACTTTGC 59.428 50.000 0.00 0.00 0.00 3.68
2829 2916 2.305927 CCCTTCTCCTCCTTACTTTGCA 59.694 50.000 0.00 0.00 0.00 4.08
2830 2917 3.339141 CCTTCTCCTCCTTACTTTGCAC 58.661 50.000 0.00 0.00 0.00 4.57
2831 2918 3.339141 CTTCTCCTCCTTACTTTGCACC 58.661 50.000 0.00 0.00 0.00 5.01
2832 2919 1.628846 TCTCCTCCTTACTTTGCACCC 59.371 52.381 0.00 0.00 0.00 4.61
2833 2920 0.323629 TCCTCCTTACTTTGCACCCG 59.676 55.000 0.00 0.00 0.00 5.28
2834 2921 1.305930 CCTCCTTACTTTGCACCCGC 61.306 60.000 0.00 0.00 39.24 6.13
2867 2954 4.430765 CGCCGCCGTTGTACCTCT 62.431 66.667 0.00 0.00 0.00 3.69
2868 2955 2.508663 GCCGCCGTTGTACCTCTC 60.509 66.667 0.00 0.00 0.00 3.20
2869 2956 2.183555 CCGCCGTTGTACCTCTCC 59.816 66.667 0.00 0.00 0.00 3.71
2870 2957 2.642254 CCGCCGTTGTACCTCTCCA 61.642 63.158 0.00 0.00 0.00 3.86
2871 2958 1.445582 CGCCGTTGTACCTCTCCAC 60.446 63.158 0.00 0.00 0.00 4.02
2872 2959 1.079336 GCCGTTGTACCTCTCCACC 60.079 63.158 0.00 0.00 0.00 4.61
2873 2960 1.595357 CCGTTGTACCTCTCCACCC 59.405 63.158 0.00 0.00 0.00 4.61
2874 2961 1.214589 CGTTGTACCTCTCCACCCG 59.785 63.158 0.00 0.00 0.00 5.28
2875 2962 1.079336 GTTGTACCTCTCCACCCGC 60.079 63.158 0.00 0.00 0.00 6.13
2876 2963 2.288025 TTGTACCTCTCCACCCGCC 61.288 63.158 0.00 0.00 0.00 6.13
2877 2964 2.682494 GTACCTCTCCACCCGCCA 60.682 66.667 0.00 0.00 0.00 5.69
2878 2965 2.682494 TACCTCTCCACCCGCCAC 60.682 66.667 0.00 0.00 0.00 5.01
2879 2966 3.533079 TACCTCTCCACCCGCCACA 62.533 63.158 0.00 0.00 0.00 4.17
2880 2967 3.636231 CCTCTCCACCCGCCACAA 61.636 66.667 0.00 0.00 0.00 3.33
2881 2968 2.429930 CTCTCCACCCGCCACAAA 59.570 61.111 0.00 0.00 0.00 2.83
2882 2969 1.672356 CTCTCCACCCGCCACAAAG 60.672 63.158 0.00 0.00 0.00 2.77
2883 2970 2.672996 CTCCACCCGCCACAAAGG 60.673 66.667 0.00 0.00 41.84 3.11
2895 2982 4.135570 CAAAGGCATTGTCGCACG 57.864 55.556 0.00 0.00 34.16 5.34
2896 2983 1.282570 CAAAGGCATTGTCGCACGT 59.717 52.632 0.00 0.00 34.16 4.49
2897 2984 0.317770 CAAAGGCATTGTCGCACGTT 60.318 50.000 0.00 0.00 34.16 3.99
2898 2985 0.040425 AAAGGCATTGTCGCACGTTC 60.040 50.000 0.00 0.00 0.00 3.95
2899 2986 2.170260 AAGGCATTGTCGCACGTTCG 62.170 55.000 0.00 0.00 0.00 3.95
2900 2987 2.865151 GCATTGTCGCACGTTCGC 60.865 61.111 1.72 0.00 0.00 4.70
2901 2988 2.548787 CATTGTCGCACGTTCGCA 59.451 55.556 1.72 1.51 0.00 5.10
2902 2989 1.083080 CATTGTCGCACGTTCGCAA 60.083 52.632 16.11 16.11 33.04 4.85
2903 2990 1.083015 ATTGTCGCACGTTCGCAAC 60.083 52.632 16.11 6.14 32.00 4.17
2904 2991 2.438385 ATTGTCGCACGTTCGCAACC 62.438 55.000 16.11 0.91 32.00 3.77
2905 2992 3.632107 GTCGCACGTTCGCAACCA 61.632 61.111 1.72 0.00 0.00 3.67
2906 2993 3.334751 TCGCACGTTCGCAACCAG 61.335 61.111 1.72 0.00 0.00 4.00
2908 2995 3.947841 GCACGTTCGCAACCAGCA 61.948 61.111 0.00 0.00 46.13 4.41
2909 2996 2.052237 CACGTTCGCAACCAGCAC 60.052 61.111 0.00 0.00 46.13 4.40
2910 2997 3.276846 ACGTTCGCAACCAGCACC 61.277 61.111 0.00 0.00 46.13 5.01
2911 2998 4.368808 CGTTCGCAACCAGCACCG 62.369 66.667 0.00 0.00 46.13 4.94
2912 2999 2.970324 GTTCGCAACCAGCACCGA 60.970 61.111 0.00 0.00 46.13 4.69
2913 3000 2.970324 TTCGCAACCAGCACCGAC 60.970 61.111 0.00 0.00 46.13 4.79
2933 3020 4.807039 GCCCGCTCGCCTTTACGA 62.807 66.667 0.00 0.00 40.36 3.43
2934 3021 2.106332 CCCGCTCGCCTTTACGAT 59.894 61.111 0.00 0.00 42.02 3.73
2935 3022 2.237751 CCCGCTCGCCTTTACGATG 61.238 63.158 0.00 0.00 42.02 3.84
2936 3023 2.237751 CCGCTCGCCTTTACGATGG 61.238 63.158 0.00 0.00 42.02 3.51
2937 3024 2.871427 CGCTCGCCTTTACGATGGC 61.871 63.158 0.00 0.00 42.02 4.40
2941 3028 2.709475 GCCTTTACGATGGCGCTG 59.291 61.111 7.64 0.00 42.48 5.18
2942 3029 2.106683 GCCTTTACGATGGCGCTGT 61.107 57.895 7.64 3.74 42.48 4.40
2943 3030 2.006772 CCTTTACGATGGCGCTGTC 58.993 57.895 7.64 4.82 42.48 3.51
2944 3031 1.429148 CCTTTACGATGGCGCTGTCC 61.429 60.000 7.64 0.00 42.48 4.02
2945 3032 0.739462 CTTTACGATGGCGCTGTCCA 60.739 55.000 7.64 0.00 42.48 4.02
2946 3033 1.017177 TTTACGATGGCGCTGTCCAC 61.017 55.000 7.64 0.00 42.48 4.02
2947 3034 2.845752 TTACGATGGCGCTGTCCACC 62.846 60.000 7.64 0.00 42.48 4.61
2949 3036 4.101448 GATGGCGCTGTCCACCCT 62.101 66.667 7.64 0.00 39.25 4.34
2950 3037 4.415150 ATGGCGCTGTCCACCCTG 62.415 66.667 7.64 0.00 39.25 4.45
2959 3046 3.936408 TCCACCCTGGAGCCATTT 58.064 55.556 0.00 0.00 42.67 2.32
2960 3047 1.383799 TCCACCCTGGAGCCATTTG 59.616 57.895 0.00 0.00 42.67 2.32
2961 3048 1.077265 CCACCCTGGAGCCATTTGT 59.923 57.895 0.00 0.00 40.96 2.83
2962 3049 0.331278 CCACCCTGGAGCCATTTGTA 59.669 55.000 0.00 0.00 40.96 2.41
2963 3050 1.463674 CACCCTGGAGCCATTTGTAC 58.536 55.000 0.00 0.00 0.00 2.90
2964 3051 0.331616 ACCCTGGAGCCATTTGTACC 59.668 55.000 0.00 0.00 0.00 3.34
2965 3052 0.331278 CCCTGGAGCCATTTGTACCA 59.669 55.000 0.00 0.00 0.00 3.25
2966 3053 1.683011 CCCTGGAGCCATTTGTACCAG 60.683 57.143 0.00 0.00 45.09 4.00
2967 3054 1.755179 CTGGAGCCATTTGTACCAGG 58.245 55.000 0.00 0.00 42.77 4.45
2968 3055 1.004745 CTGGAGCCATTTGTACCAGGT 59.995 52.381 0.00 0.00 42.77 4.00
2969 3056 2.238646 CTGGAGCCATTTGTACCAGGTA 59.761 50.000 0.00 0.00 42.77 3.08
2970 3057 2.026636 TGGAGCCATTTGTACCAGGTAC 60.027 50.000 21.55 21.55 39.24 3.34
2971 3058 2.026636 GGAGCCATTTGTACCAGGTACA 60.027 50.000 26.26 26.26 45.63 2.90
2972 3059 3.007635 GAGCCATTTGTACCAGGTACAC 58.992 50.000 29.21 18.20 46.71 2.90
2973 3060 2.642807 AGCCATTTGTACCAGGTACACT 59.357 45.455 29.21 19.97 46.71 3.55
2974 3061 3.007635 GCCATTTGTACCAGGTACACTC 58.992 50.000 29.21 13.95 46.71 3.51
2975 3062 3.606687 CCATTTGTACCAGGTACACTCC 58.393 50.000 29.21 4.63 46.71 3.85
2976 3063 3.259064 CATTTGTACCAGGTACACTCCG 58.741 50.000 29.21 15.44 46.71 4.63
2977 3064 0.604578 TTGTACCAGGTACACTCCGC 59.395 55.000 29.21 3.17 46.71 5.54
2978 3065 1.252904 TGTACCAGGTACACTCCGCC 61.253 60.000 26.26 0.64 42.99 6.13
2979 3066 1.683365 TACCAGGTACACTCCGCCC 60.683 63.158 0.00 0.00 0.00 6.13
2980 3067 3.782443 CCAGGTACACTCCGCCCC 61.782 72.222 0.00 0.00 0.00 5.80
2981 3068 3.782443 CAGGTACACTCCGCCCCC 61.782 72.222 0.00 0.00 0.00 5.40
2982 3069 4.007323 AGGTACACTCCGCCCCCT 62.007 66.667 0.00 0.00 0.00 4.79
2983 3070 3.782443 GGTACACTCCGCCCCCTG 61.782 72.222 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.111466 TCAAGTGGACATGTCAATCAATCATA 58.889 34.615 26.47 2.85 0.00 2.15
3 4 5.315348 TCAAGTGGACATGTCAATCAATCA 58.685 37.500 26.47 10.99 0.00 2.57
5 6 6.127535 GGATTCAAGTGGACATGTCAATCAAT 60.128 38.462 26.47 12.34 0.00 2.57
6 7 5.183713 GGATTCAAGTGGACATGTCAATCAA 59.816 40.000 26.47 11.47 0.00 2.57
7 8 4.701651 GGATTCAAGTGGACATGTCAATCA 59.298 41.667 26.47 13.13 0.00 2.57
8 9 4.946157 AGGATTCAAGTGGACATGTCAATC 59.054 41.667 26.47 22.04 0.00 2.67
9 10 4.927049 AGGATTCAAGTGGACATGTCAAT 58.073 39.130 26.47 15.92 0.00 2.57
10 11 4.326826 GAGGATTCAAGTGGACATGTCAA 58.673 43.478 26.47 14.09 0.00 3.18
11 12 3.307691 GGAGGATTCAAGTGGACATGTCA 60.308 47.826 26.47 10.65 0.00 3.58
12 13 3.274288 GGAGGATTCAAGTGGACATGTC 58.726 50.000 17.91 17.91 0.00 3.06
13 14 2.644299 TGGAGGATTCAAGTGGACATGT 59.356 45.455 0.00 0.00 0.00 3.21
14 15 3.054875 TCTGGAGGATTCAAGTGGACATG 60.055 47.826 0.00 0.00 0.00 3.21
15 16 3.184628 TCTGGAGGATTCAAGTGGACAT 58.815 45.455 0.00 0.00 0.00 3.06
16 17 2.619931 TCTGGAGGATTCAAGTGGACA 58.380 47.619 0.00 0.00 0.00 4.02
17 18 3.703001 TTCTGGAGGATTCAAGTGGAC 57.297 47.619 0.00 0.00 0.00 4.02
18 19 4.141620 GCTATTCTGGAGGATTCAAGTGGA 60.142 45.833 0.00 0.00 0.00 4.02
19 20 4.133078 GCTATTCTGGAGGATTCAAGTGG 58.867 47.826 0.00 0.00 0.00 4.00
20 21 4.774124 TGCTATTCTGGAGGATTCAAGTG 58.226 43.478 0.00 0.00 0.00 3.16
21 22 5.435291 CTTGCTATTCTGGAGGATTCAAGT 58.565 41.667 0.00 0.00 0.00 3.16
22 23 4.275443 GCTTGCTATTCTGGAGGATTCAAG 59.725 45.833 0.00 0.00 33.57 3.02
23 24 4.202441 GCTTGCTATTCTGGAGGATTCAA 58.798 43.478 0.00 0.00 0.00 2.69
24 25 3.434167 GGCTTGCTATTCTGGAGGATTCA 60.434 47.826 0.00 0.00 0.00 2.57
25 26 3.145286 GGCTTGCTATTCTGGAGGATTC 58.855 50.000 0.00 0.00 0.00 2.52
26 27 2.511218 TGGCTTGCTATTCTGGAGGATT 59.489 45.455 0.00 0.00 0.00 3.01
27 28 2.130193 TGGCTTGCTATTCTGGAGGAT 58.870 47.619 0.00 0.00 0.00 3.24
28 29 1.210478 GTGGCTTGCTATTCTGGAGGA 59.790 52.381 0.00 0.00 0.00 3.71
29 30 1.065199 TGTGGCTTGCTATTCTGGAGG 60.065 52.381 0.00 0.00 0.00 4.30
30 31 2.408271 TGTGGCTTGCTATTCTGGAG 57.592 50.000 0.00 0.00 0.00 3.86
31 32 2.239402 TCATGTGGCTTGCTATTCTGGA 59.761 45.455 0.00 0.00 0.00 3.86
32 33 2.646930 TCATGTGGCTTGCTATTCTGG 58.353 47.619 0.00 0.00 0.00 3.86
33 34 4.913335 ATTCATGTGGCTTGCTATTCTG 57.087 40.909 0.00 0.00 0.00 3.02
34 35 4.951715 TGAATTCATGTGGCTTGCTATTCT 59.048 37.500 3.38 0.00 0.00 2.40
35 36 5.066893 TCTGAATTCATGTGGCTTGCTATTC 59.933 40.000 8.96 0.00 0.00 1.75
36 37 4.951715 TCTGAATTCATGTGGCTTGCTATT 59.048 37.500 8.96 0.00 0.00 1.73
37 38 4.337555 GTCTGAATTCATGTGGCTTGCTAT 59.662 41.667 8.96 0.00 0.00 2.97
38 39 3.691118 GTCTGAATTCATGTGGCTTGCTA 59.309 43.478 8.96 0.00 0.00 3.49
39 40 2.490903 GTCTGAATTCATGTGGCTTGCT 59.509 45.455 8.96 0.00 0.00 3.91
40 41 2.490903 AGTCTGAATTCATGTGGCTTGC 59.509 45.455 8.96 0.00 0.00 4.01
41 42 7.741027 ATATAGTCTGAATTCATGTGGCTTG 57.259 36.000 8.96 0.00 0.00 4.01
43 44 9.445878 CAATATATAGTCTGAATTCATGTGGCT 57.554 33.333 8.96 7.06 0.00 4.75
44 45 9.224267 ACAATATATAGTCTGAATTCATGTGGC 57.776 33.333 8.96 0.00 0.00 5.01
53 54 9.797642 TGGCATCAAACAATATATAGTCTGAAT 57.202 29.630 0.00 0.00 0.00 2.57
54 55 9.056005 GTGGCATCAAACAATATATAGTCTGAA 57.944 33.333 0.00 0.00 0.00 3.02
55 56 8.210265 TGTGGCATCAAACAATATATAGTCTGA 58.790 33.333 0.00 0.00 0.00 3.27
56 57 8.382030 TGTGGCATCAAACAATATATAGTCTG 57.618 34.615 0.00 0.00 0.00 3.51
57 58 8.432013 TCTGTGGCATCAAACAATATATAGTCT 58.568 33.333 0.00 0.00 0.00 3.24
58 59 8.607441 TCTGTGGCATCAAACAATATATAGTC 57.393 34.615 0.00 0.00 0.00 2.59
59 60 8.978874 TTCTGTGGCATCAAACAATATATAGT 57.021 30.769 0.00 0.00 0.00 2.12
88 89 2.232399 ACCGCGGATTGGTTAGTTTTT 58.768 42.857 35.90 0.00 35.82 1.94
89 90 1.900245 ACCGCGGATTGGTTAGTTTT 58.100 45.000 35.90 0.00 35.82 2.43
90 91 3.637184 ACCGCGGATTGGTTAGTTT 57.363 47.368 35.90 0.00 35.82 2.66
96 97 1.312371 CCATCAAACCGCGGATTGGT 61.312 55.000 37.56 32.54 42.98 3.67
97 98 1.312371 ACCATCAAACCGCGGATTGG 61.312 55.000 37.56 28.92 0.00 3.16
98 99 0.525761 AACCATCAAACCGCGGATTG 59.474 50.000 34.71 34.71 0.00 2.67
99 100 2.014128 CTAACCATCAAACCGCGGATT 58.986 47.619 35.90 25.63 0.00 3.01
100 101 1.663695 CTAACCATCAAACCGCGGAT 58.336 50.000 35.90 19.90 0.00 4.18
101 102 0.391927 CCTAACCATCAAACCGCGGA 60.392 55.000 35.90 10.13 0.00 5.54
102 103 0.391927 TCCTAACCATCAAACCGCGG 60.392 55.000 26.86 26.86 0.00 6.46
103 104 1.006832 CTCCTAACCATCAAACCGCG 58.993 55.000 0.00 0.00 0.00 6.46
104 105 2.396590 TCTCCTAACCATCAAACCGC 57.603 50.000 0.00 0.00 0.00 5.68
105 106 3.670625 TGTTCTCCTAACCATCAAACCG 58.329 45.455 0.00 0.00 0.00 4.44
106 107 5.105756 CCATTGTTCTCCTAACCATCAAACC 60.106 44.000 0.00 0.00 0.00 3.27
107 108 5.476945 ACCATTGTTCTCCTAACCATCAAAC 59.523 40.000 0.00 0.00 0.00 2.93
108 109 5.640147 ACCATTGTTCTCCTAACCATCAAA 58.360 37.500 0.00 0.00 0.00 2.69
109 110 5.255397 ACCATTGTTCTCCTAACCATCAA 57.745 39.130 0.00 0.00 0.00 2.57
110 111 4.927267 ACCATTGTTCTCCTAACCATCA 57.073 40.909 0.00 0.00 0.00 3.07
111 112 5.998363 GGATACCATTGTTCTCCTAACCATC 59.002 44.000 0.00 0.00 0.00 3.51
112 113 5.672194 AGGATACCATTGTTCTCCTAACCAT 59.328 40.000 0.39 0.00 35.06 3.55
113 114 5.036916 AGGATACCATTGTTCTCCTAACCA 58.963 41.667 0.39 0.00 35.06 3.67
114 115 5.632034 AGGATACCATTGTTCTCCTAACC 57.368 43.478 0.39 0.00 35.06 2.85
115 116 7.793036 ACTAAGGATACCATTGTTCTCCTAAC 58.207 38.462 2.35 0.00 35.50 2.34
116 117 7.070821 GGACTAAGGATACCATTGTTCTCCTAA 59.929 40.741 2.35 0.00 35.50 2.69
117 118 6.553852 GGACTAAGGATACCATTGTTCTCCTA 59.446 42.308 2.35 0.00 35.50 2.94
118 119 5.367060 GGACTAAGGATACCATTGTTCTCCT 59.633 44.000 0.00 0.00 37.15 3.69
119 120 5.130477 TGGACTAAGGATACCATTGTTCTCC 59.870 44.000 0.00 0.00 37.17 3.71
120 121 6.235231 TGGACTAAGGATACCATTGTTCTC 57.765 41.667 0.00 0.00 37.17 2.87
121 122 6.386927 TGATGGACTAAGGATACCATTGTTCT 59.613 38.462 0.00 0.00 42.23 3.01
122 123 6.591935 TGATGGACTAAGGATACCATTGTTC 58.408 40.000 0.00 0.00 42.23 3.18
123 124 6.386927 TCTGATGGACTAAGGATACCATTGTT 59.613 38.462 0.00 0.00 42.23 2.83
124 125 5.905331 TCTGATGGACTAAGGATACCATTGT 59.095 40.000 0.00 0.00 42.23 2.71
125 126 6.042552 ACTCTGATGGACTAAGGATACCATTG 59.957 42.308 0.00 0.00 42.23 2.82
126 127 6.146760 ACTCTGATGGACTAAGGATACCATT 58.853 40.000 0.00 0.00 42.23 3.16
127 128 5.721225 ACTCTGATGGACTAAGGATACCAT 58.279 41.667 0.00 0.00 44.40 3.55
128 129 5.144159 ACTCTGATGGACTAAGGATACCA 57.856 43.478 0.00 0.00 36.83 3.25
129 130 5.598830 TGAACTCTGATGGACTAAGGATACC 59.401 44.000 0.00 0.00 37.17 2.73
130 131 6.716934 TGAACTCTGATGGACTAAGGATAC 57.283 41.667 0.00 0.00 0.00 2.24
131 132 6.897966 ACTTGAACTCTGATGGACTAAGGATA 59.102 38.462 0.00 0.00 0.00 2.59
132 133 5.723887 ACTTGAACTCTGATGGACTAAGGAT 59.276 40.000 0.00 0.00 0.00 3.24
133 134 5.087323 ACTTGAACTCTGATGGACTAAGGA 58.913 41.667 0.00 0.00 0.00 3.36
134 135 5.413309 ACTTGAACTCTGATGGACTAAGG 57.587 43.478 0.00 0.00 0.00 2.69
135 136 5.186797 AGGACTTGAACTCTGATGGACTAAG 59.813 44.000 0.00 0.00 0.00 2.18
136 137 5.087323 AGGACTTGAACTCTGATGGACTAA 58.913 41.667 0.00 0.00 0.00 2.24
137 138 4.678256 AGGACTTGAACTCTGATGGACTA 58.322 43.478 0.00 0.00 0.00 2.59
138 139 3.515562 AGGACTTGAACTCTGATGGACT 58.484 45.455 0.00 0.00 0.00 3.85
139 140 3.971245 AGGACTTGAACTCTGATGGAC 57.029 47.619 0.00 0.00 0.00 4.02
140 141 4.707448 GTCTAGGACTTGAACTCTGATGGA 59.293 45.833 0.00 0.00 0.00 3.41
141 142 4.709397 AGTCTAGGACTTGAACTCTGATGG 59.291 45.833 0.00 0.00 40.28 3.51
142 143 5.913137 AGTCTAGGACTTGAACTCTGATG 57.087 43.478 0.00 0.00 40.28 3.07
153 154 6.851698 GAGCATCAATGTCAAGTCTAGGACTT 60.852 42.308 7.06 7.06 43.95 3.01
154 155 4.469227 AGCATCAATGTCAAGTCTAGGACT 59.531 41.667 6.25 0.00 45.64 3.85
155 156 4.764172 AGCATCAATGTCAAGTCTAGGAC 58.236 43.478 0.00 0.00 34.63 3.85
156 157 4.440663 CGAGCATCAATGTCAAGTCTAGGA 60.441 45.833 0.00 0.00 33.17 2.94
157 158 3.801050 CGAGCATCAATGTCAAGTCTAGG 59.199 47.826 0.00 0.00 33.17 3.02
158 159 4.428209 ACGAGCATCAATGTCAAGTCTAG 58.572 43.478 0.00 0.00 33.17 2.43
159 160 4.456280 ACGAGCATCAATGTCAAGTCTA 57.544 40.909 0.00 0.00 33.17 2.59
160 161 3.325293 ACGAGCATCAATGTCAAGTCT 57.675 42.857 0.00 0.00 33.17 3.24
161 162 5.725110 AATACGAGCATCAATGTCAAGTC 57.275 39.130 0.00 0.00 33.17 3.01
162 163 6.500684 AAAATACGAGCATCAATGTCAAGT 57.499 33.333 0.00 0.00 33.17 3.16
184 185 9.932699 TCGTAAGACGTCAAATAAATTCAAAAA 57.067 25.926 19.50 0.00 45.01 1.94
211 212 0.740868 ATCCCACTGAACGCACATCG 60.741 55.000 0.00 0.00 45.38 3.84
212 213 0.729116 CATCCCACTGAACGCACATC 59.271 55.000 0.00 0.00 0.00 3.06
213 214 0.324614 TCATCCCACTGAACGCACAT 59.675 50.000 0.00 0.00 0.00 3.21
214 215 0.320683 CTCATCCCACTGAACGCACA 60.321 55.000 0.00 0.00 0.00 4.57
215 216 0.037326 TCTCATCCCACTGAACGCAC 60.037 55.000 0.00 0.00 0.00 5.34
216 217 0.037326 GTCTCATCCCACTGAACGCA 60.037 55.000 0.00 0.00 0.00 5.24
217 218 0.037326 TGTCTCATCCCACTGAACGC 60.037 55.000 0.00 0.00 0.00 4.84
218 219 2.680312 ATGTCTCATCCCACTGAACG 57.320 50.000 0.00 0.00 0.00 3.95
219 220 3.937706 CAGAATGTCTCATCCCACTGAAC 59.062 47.826 0.00 0.00 0.00 3.18
220 221 3.054875 CCAGAATGTCTCATCCCACTGAA 60.055 47.826 0.00 0.00 0.00 3.02
221 222 2.502947 CCAGAATGTCTCATCCCACTGA 59.497 50.000 0.00 0.00 0.00 3.41
222 223 2.238144 ACCAGAATGTCTCATCCCACTG 59.762 50.000 0.00 0.00 0.00 3.66
223 224 2.555664 ACCAGAATGTCTCATCCCACT 58.444 47.619 0.00 0.00 0.00 4.00
224 225 3.012518 CAACCAGAATGTCTCATCCCAC 58.987 50.000 0.00 0.00 0.00 4.61
225 226 2.912295 TCAACCAGAATGTCTCATCCCA 59.088 45.455 0.00 0.00 0.00 4.37
226 227 3.634397 TCAACCAGAATGTCTCATCCC 57.366 47.619 0.00 0.00 0.00 3.85
227 228 6.206243 CCATAATCAACCAGAATGTCTCATCC 59.794 42.308 0.00 0.00 0.00 3.51
228 229 6.994496 TCCATAATCAACCAGAATGTCTCATC 59.006 38.462 0.00 0.00 0.00 2.92
229 230 6.903516 TCCATAATCAACCAGAATGTCTCAT 58.096 36.000 0.00 0.00 0.00 2.90
230 231 6.312141 TCCATAATCAACCAGAATGTCTCA 57.688 37.500 0.00 0.00 0.00 3.27
231 232 5.762218 CCTCCATAATCAACCAGAATGTCTC 59.238 44.000 0.00 0.00 0.00 3.36
232 233 5.688807 CCTCCATAATCAACCAGAATGTCT 58.311 41.667 0.00 0.00 0.00 3.41
233 234 4.276926 GCCTCCATAATCAACCAGAATGTC 59.723 45.833 0.00 0.00 0.00 3.06
234 235 4.210331 GCCTCCATAATCAACCAGAATGT 58.790 43.478 0.00 0.00 0.00 2.71
235 236 3.251729 CGCCTCCATAATCAACCAGAATG 59.748 47.826 0.00 0.00 0.00 2.67
236 237 3.117888 ACGCCTCCATAATCAACCAGAAT 60.118 43.478 0.00 0.00 0.00 2.40
252 253 3.575351 AAGTCGCCACAGACGCCTC 62.575 63.158 0.00 0.00 45.26 4.70
259 260 3.189080 TCAAATTGATGAAGTCGCCACAG 59.811 43.478 0.00 0.00 0.00 3.66
283 284 0.597637 GACTCGGCCGGTACATCATG 60.598 60.000 27.83 6.87 0.00 3.07
310 311 3.813724 CACACCTTATCCAGATGAGCATG 59.186 47.826 0.00 0.00 0.00 4.06
319 320 0.659427 CGCATGCACACCTTATCCAG 59.341 55.000 19.57 0.00 0.00 3.86
320 321 0.035534 ACGCATGCACACCTTATCCA 60.036 50.000 19.57 0.00 0.00 3.41
430 431 6.499106 AATTCCATTTCACTCAAACCCTTT 57.501 33.333 0.00 0.00 0.00 3.11
433 434 5.700832 GGAAAATTCCATTTCACTCAAACCC 59.299 40.000 7.32 0.00 46.76 4.11
461 463 8.610896 TCAAAGATTTGGTTTGCACTTTATTTG 58.389 29.630 5.52 0.00 38.66 2.32
517 521 8.423906 TTTAGGTCCTACATATCCTCTTGATC 57.576 38.462 0.00 0.00 34.76 2.92
595 600 1.001293 TGCTTCTGGGCGCTATATCAG 59.999 52.381 7.64 8.02 34.52 2.90
603 608 1.153958 GTGAAATGCTTCTGGGCGC 60.154 57.895 0.00 0.00 34.52 6.53
604 609 1.667724 CTAGTGAAATGCTTCTGGGCG 59.332 52.381 0.00 0.00 34.52 6.13
647 654 6.231951 GTGCCTTCTAGAAGACCTAGTTTTT 58.768 40.000 30.17 0.00 44.15 1.94
648 655 5.567025 CGTGCCTTCTAGAAGACCTAGTTTT 60.567 44.000 30.17 0.00 44.15 2.43
649 656 4.082136 CGTGCCTTCTAGAAGACCTAGTTT 60.082 45.833 30.17 0.00 44.15 2.66
650 657 3.444388 CGTGCCTTCTAGAAGACCTAGTT 59.556 47.826 30.17 0.00 44.15 2.24
681 688 7.654022 TCCTTTGTGCTTAAAATAATAGGGG 57.346 36.000 0.00 0.00 0.00 4.79
682 689 8.197439 CCTTCCTTTGTGCTTAAAATAATAGGG 58.803 37.037 0.00 0.00 0.00 3.53
683 690 8.966868 TCCTTCCTTTGTGCTTAAAATAATAGG 58.033 33.333 0.00 0.00 0.00 2.57
746 767 1.474077 GTGGAGATCATTGTGGGCAAC 59.526 52.381 0.00 0.00 37.44 4.17
747 768 1.355381 AGTGGAGATCATTGTGGGCAA 59.645 47.619 0.00 0.00 39.16 4.52
748 769 0.994247 AGTGGAGATCATTGTGGGCA 59.006 50.000 0.00 0.00 0.00 5.36
749 770 1.211457 AGAGTGGAGATCATTGTGGGC 59.789 52.381 0.00 0.00 0.00 5.36
750 771 2.502947 TGAGAGTGGAGATCATTGTGGG 59.497 50.000 0.00 0.00 0.00 4.61
751 772 3.529533 GTGAGAGTGGAGATCATTGTGG 58.470 50.000 0.00 0.00 0.00 4.17
752 773 3.055602 TGGTGAGAGTGGAGATCATTGTG 60.056 47.826 0.00 0.00 0.00 3.33
753 774 3.176411 TGGTGAGAGTGGAGATCATTGT 58.824 45.455 0.00 0.00 0.00 2.71
754 775 3.900966 TGGTGAGAGTGGAGATCATTG 57.099 47.619 0.00 0.00 0.00 2.82
755 776 3.584406 TGTTGGTGAGAGTGGAGATCATT 59.416 43.478 0.00 0.00 0.00 2.57
756 777 3.055530 GTGTTGGTGAGAGTGGAGATCAT 60.056 47.826 0.00 0.00 0.00 2.45
757 778 2.300152 GTGTTGGTGAGAGTGGAGATCA 59.700 50.000 0.00 0.00 0.00 2.92
758 779 2.564947 AGTGTTGGTGAGAGTGGAGATC 59.435 50.000 0.00 0.00 0.00 2.75
771 812 2.281070 CGGCAGAGCAGTGTTGGT 60.281 61.111 0.00 0.00 37.84 3.67
912 966 3.646715 CGGGGGTTGGCTCTGGAA 61.647 66.667 0.00 0.00 0.00 3.53
915 969 4.101448 CTCCGGGGGTTGGCTCTG 62.101 72.222 0.00 0.00 0.00 3.35
927 981 4.813526 CTCGTGACGTCGCTCCGG 62.814 72.222 25.28 11.03 0.00 5.14
930 984 2.428569 TTGCTCGTGACGTCGCTC 60.429 61.111 25.28 14.86 0.00 5.03
938 992 4.680237 CCGTGGGCTTGCTCGTGA 62.680 66.667 0.00 0.00 0.00 4.35
946 1000 1.153706 CGTATTCGTCCGTGGGCTT 60.154 57.895 0.00 0.00 0.00 4.35
950 1004 2.100797 TCGCGTATTCGTCCGTGG 59.899 61.111 5.77 0.00 39.49 4.94
951 1005 2.553221 CGTCGCGTATTCGTCCGTG 61.553 63.158 5.77 0.00 39.49 4.94
955 1017 2.577644 TGGCGTCGCGTATTCGTC 60.578 61.111 11.75 9.54 39.49 4.20
956 1018 2.877582 GTGGCGTCGCGTATTCGT 60.878 61.111 11.75 0.00 39.49 3.85
971 1033 2.582728 CTAGCTGAGCTCTTCTGGTG 57.417 55.000 11.68 3.75 40.44 4.17
1026 1088 0.039074 AGAAGTCGAAGTGCACCTCG 60.039 55.000 27.88 27.88 0.00 4.63
1225 1287 1.513586 CGCCGTGGAAGTAGACGAC 60.514 63.158 0.00 0.00 37.81 4.34
1590 1652 0.324923 AGTAGGGGTGCACCACGATA 60.325 55.000 35.78 20.03 46.41 2.92
1999 2074 2.882137 CGGGAAACTTACTTCCTTTGCA 59.118 45.455 2.60 0.00 43.87 4.08
2010 2090 2.299582 TCACGGATTCACGGGAAACTTA 59.700 45.455 3.14 0.00 44.30 2.24
2024 2105 5.812642 GCGATAAGATTATTCCATCACGGAT 59.187 40.000 0.00 0.00 45.80 4.18
2025 2106 5.168569 GCGATAAGATTATTCCATCACGGA 58.831 41.667 0.00 0.00 44.40 4.69
2026 2107 4.330074 GGCGATAAGATTATTCCATCACGG 59.670 45.833 0.00 0.00 0.00 4.94
2027 2108 4.929211 TGGCGATAAGATTATTCCATCACG 59.071 41.667 0.00 0.00 0.00 4.35
2028 2109 6.992063 ATGGCGATAAGATTATTCCATCAC 57.008 37.500 11.45 0.00 34.54 3.06
2030 2111 7.615582 TCAATGGCGATAAGATTATTCCATC 57.384 36.000 15.00 0.00 36.57 3.51
2033 2114 7.383102 ACATCAATGGCGATAAGATTATTCC 57.617 36.000 0.00 0.00 0.00 3.01
2041 2122 4.212847 CAGAGGAACATCAATGGCGATAAG 59.787 45.833 0.00 0.00 0.00 1.73
2082 2163 3.694566 CCGAGGAACAAGAAATAAAGGGG 59.305 47.826 0.00 0.00 0.00 4.79
2093 2177 3.522553 GAGACCATAACCGAGGAACAAG 58.477 50.000 0.00 0.00 0.00 3.16
2146 2231 1.279271 AGCTTTCTTCGCCATGGTACT 59.721 47.619 14.67 0.00 0.00 2.73
2147 2232 1.739067 AGCTTTCTTCGCCATGGTAC 58.261 50.000 14.67 0.00 0.00 3.34
2162 2247 5.499004 TGTCAAGAAACCCACTATAGCTT 57.501 39.130 0.00 0.00 0.00 3.74
2168 2253 5.451242 GCACAAATTGTCAAGAAACCCACTA 60.451 40.000 0.00 0.00 0.00 2.74
2169 2254 4.680440 GCACAAATTGTCAAGAAACCCACT 60.680 41.667 0.00 0.00 0.00 4.00
2221 2306 2.098117 CCTTTATTGCTTTCGGCCTCAG 59.902 50.000 0.00 0.00 40.92 3.35
2296 2383 4.830826 AACGGTTTCTCCTCAAAACATC 57.169 40.909 0.00 0.00 38.16 3.06
2316 2403 5.646692 AGATGCCCTTACAAGCCTAATAA 57.353 39.130 0.00 0.00 0.00 1.40
2323 2410 2.819608 TGTTGAAGATGCCCTTACAAGC 59.180 45.455 0.00 0.00 34.68 4.01
2339 2426 1.152922 GGTTTGGGGTCGGTGTTGA 60.153 57.895 0.00 0.00 0.00 3.18
2344 2431 2.111669 GAACGGTTTGGGGTCGGT 59.888 61.111 0.00 0.00 0.00 4.69
2347 2434 3.719144 CGCGAACGGTTTGGGGTC 61.719 66.667 15.41 0.00 34.97 4.46
2352 2439 1.058695 GAGACATACGCGAACGGTTTG 59.941 52.381 15.93 3.65 46.04 2.93
2353 2440 1.343506 GAGACATACGCGAACGGTTT 58.656 50.000 15.93 0.00 46.04 3.27
2356 2443 1.061411 TCGAGACATACGCGAACGG 59.939 57.895 15.93 1.07 46.42 4.44
2361 2448 1.196749 CTGCAGTCGAGACATACGCG 61.197 60.000 3.53 3.53 42.74 6.01
2362 2449 0.098905 TCTGCAGTCGAGACATACGC 59.901 55.000 14.67 3.52 0.00 4.42
2363 2450 2.445316 CTTCTGCAGTCGAGACATACG 58.555 52.381 14.67 0.00 0.00 3.06
2364 2451 2.189342 GCTTCTGCAGTCGAGACATAC 58.811 52.381 14.67 0.00 39.41 2.39
2365 2452 1.135139 GGCTTCTGCAGTCGAGACATA 59.865 52.381 14.67 0.00 41.91 2.29
2366 2453 0.108424 GGCTTCTGCAGTCGAGACAT 60.108 55.000 14.67 0.00 41.91 3.06
2367 2454 1.290324 GGCTTCTGCAGTCGAGACA 59.710 57.895 14.67 0.00 41.91 3.41
2368 2455 0.108424 ATGGCTTCTGCAGTCGAGAC 60.108 55.000 14.67 12.87 41.91 3.36
2369 2456 0.174389 GATGGCTTCTGCAGTCGAGA 59.826 55.000 14.67 0.00 41.91 4.04
2370 2457 0.809241 GGATGGCTTCTGCAGTCGAG 60.809 60.000 14.67 11.36 41.91 4.04
2371 2458 1.219124 GGATGGCTTCTGCAGTCGA 59.781 57.895 14.67 2.21 41.91 4.20
2372 2459 0.674581 TTGGATGGCTTCTGCAGTCG 60.675 55.000 14.67 7.12 41.91 4.18
2373 2460 0.807496 GTTGGATGGCTTCTGCAGTC 59.193 55.000 14.67 2.10 41.91 3.51
2374 2461 0.111061 TGTTGGATGGCTTCTGCAGT 59.889 50.000 14.67 0.00 41.91 4.40
2375 2462 0.524862 GTGTTGGATGGCTTCTGCAG 59.475 55.000 7.63 7.63 41.91 4.41
2376 2463 1.236616 CGTGTTGGATGGCTTCTGCA 61.237 55.000 0.07 0.00 41.91 4.41
2377 2464 1.503542 CGTGTTGGATGGCTTCTGC 59.496 57.895 0.07 0.00 38.76 4.26
2378 2465 0.606401 ACCGTGTTGGATGGCTTCTG 60.606 55.000 0.07 0.00 42.00 3.02
2379 2466 0.321653 GACCGTGTTGGATGGCTTCT 60.322 55.000 0.07 0.00 42.00 2.85
2380 2467 1.305930 GGACCGTGTTGGATGGCTTC 61.306 60.000 0.00 0.00 42.00 3.86
2381 2468 1.303317 GGACCGTGTTGGATGGCTT 60.303 57.895 0.00 0.00 42.00 4.35
2382 2469 2.224159 AGGACCGTGTTGGATGGCT 61.224 57.895 0.00 0.00 42.00 4.75
2383 2470 2.040544 CAGGACCGTGTTGGATGGC 61.041 63.158 0.00 0.00 42.00 4.40
2384 2471 0.611200 TACAGGACCGTGTTGGATGG 59.389 55.000 0.54 0.00 42.00 3.51
2385 2472 2.550978 GATACAGGACCGTGTTGGATG 58.449 52.381 0.54 0.00 42.00 3.51
2386 2473 1.136305 CGATACAGGACCGTGTTGGAT 59.864 52.381 0.54 0.00 42.00 3.41
2387 2474 0.528924 CGATACAGGACCGTGTTGGA 59.471 55.000 0.54 0.00 42.00 3.53
2388 2475 0.459585 CCGATACAGGACCGTGTTGG 60.460 60.000 0.54 4.16 46.41 3.77
2389 2476 0.245539 ACCGATACAGGACCGTGTTG 59.754 55.000 0.54 0.00 34.73 3.33
2390 2477 0.529378 GACCGATACAGGACCGTGTT 59.471 55.000 0.54 0.00 34.73 3.32
2391 2478 1.318158 GGACCGATACAGGACCGTGT 61.318 60.000 0.96 0.96 36.47 4.49
2392 2479 1.317431 TGGACCGATACAGGACCGTG 61.317 60.000 0.67 0.00 46.73 4.94
2393 2480 1.000521 TGGACCGATACAGGACCGT 60.001 57.895 0.67 0.00 46.73 4.83
2394 2481 1.734137 CTGGACCGATACAGGACCG 59.266 63.158 0.00 0.00 46.73 4.79
2399 2486 0.179073 CTTGCCCTGGACCGATACAG 60.179 60.000 0.00 0.00 36.39 2.74
2400 2487 1.622607 CCTTGCCCTGGACCGATACA 61.623 60.000 0.00 0.00 0.00 2.29
2401 2488 1.146263 CCTTGCCCTGGACCGATAC 59.854 63.158 0.00 0.00 0.00 2.24
2402 2489 1.306654 ACCTTGCCCTGGACCGATA 60.307 57.895 0.00 0.00 0.00 2.92
2403 2490 2.610859 ACCTTGCCCTGGACCGAT 60.611 61.111 0.00 0.00 0.00 4.18
2404 2491 3.319198 GACCTTGCCCTGGACCGA 61.319 66.667 0.00 0.00 0.00 4.69
2405 2492 4.410400 GGACCTTGCCCTGGACCG 62.410 72.222 0.00 0.00 30.65 4.79
2406 2493 4.410400 CGGACCTTGCCCTGGACC 62.410 72.222 0.00 0.00 36.34 4.46
2407 2494 4.410400 CCGGACCTTGCCCTGGAC 62.410 72.222 0.00 0.00 0.00 4.02
2408 2495 4.649705 TCCGGACCTTGCCCTGGA 62.650 66.667 0.00 0.00 0.00 3.86
2409 2496 4.410400 GTCCGGACCTTGCCCTGG 62.410 72.222 24.75 0.00 0.00 4.45
2410 2497 2.971598 ATGTCCGGACCTTGCCCTG 61.972 63.158 31.19 0.00 0.00 4.45
2411 2498 2.610859 ATGTCCGGACCTTGCCCT 60.611 61.111 31.19 4.82 0.00 5.19
2755 2842 1.755783 GGATGTCGGGGTCCTACGT 60.756 63.158 0.00 0.00 0.00 3.57
2756 2843 2.496291 GGGATGTCGGGGTCCTACG 61.496 68.421 0.82 0.82 34.84 3.51
2757 2844 1.382146 TGGGATGTCGGGGTCCTAC 60.382 63.158 0.00 0.00 34.84 3.18
2758 2845 1.075525 CTGGGATGTCGGGGTCCTA 60.076 63.158 0.00 0.00 34.84 2.94
2759 2846 2.365635 CTGGGATGTCGGGGTCCT 60.366 66.667 0.00 0.00 34.84 3.85
2760 2847 3.480133 CCTGGGATGTCGGGGTCC 61.480 72.222 0.00 0.00 0.00 4.46
2761 2848 2.365105 TCCTGGGATGTCGGGGTC 60.365 66.667 0.00 0.00 34.02 4.46
2762 2849 1.882189 TAGTCCTGGGATGTCGGGGT 61.882 60.000 0.00 0.00 34.02 4.95
2763 2850 1.075525 TAGTCCTGGGATGTCGGGG 60.076 63.158 0.00 0.00 34.02 5.73
2764 2851 1.400530 GGTAGTCCTGGGATGTCGGG 61.401 65.000 0.00 0.00 34.52 5.14
2765 2852 1.400530 GGGTAGTCCTGGGATGTCGG 61.401 65.000 0.00 0.00 0.00 4.79
2766 2853 1.735376 CGGGTAGTCCTGGGATGTCG 61.735 65.000 0.00 0.00 36.50 4.35
2767 2854 0.396695 TCGGGTAGTCCTGGGATGTC 60.397 60.000 0.00 0.00 40.36 3.06
2768 2855 0.264955 ATCGGGTAGTCCTGGGATGT 59.735 55.000 0.00 0.00 40.36 3.06
2769 2856 0.969894 GATCGGGTAGTCCTGGGATG 59.030 60.000 0.00 0.00 40.36 3.51
2770 2857 0.178929 GGATCGGGTAGTCCTGGGAT 60.179 60.000 0.00 0.00 40.36 3.85
2771 2858 1.232216 GGATCGGGTAGTCCTGGGA 59.768 63.158 0.00 0.00 40.36 4.37
2772 2859 1.837499 GGGATCGGGTAGTCCTGGG 60.837 68.421 0.00 0.00 40.36 4.45
2773 2860 0.471971 ATGGGATCGGGTAGTCCTGG 60.472 60.000 0.00 0.00 40.36 4.45
2774 2861 1.424638 AATGGGATCGGGTAGTCCTG 58.575 55.000 0.00 0.00 41.27 3.86
2775 2862 2.047830 GAAATGGGATCGGGTAGTCCT 58.952 52.381 0.00 0.00 34.84 3.85
2776 2863 1.071857 GGAAATGGGATCGGGTAGTCC 59.928 57.143 0.00 0.00 0.00 3.85
2777 2864 2.047830 AGGAAATGGGATCGGGTAGTC 58.952 52.381 0.00 0.00 0.00 2.59
2778 2865 2.191981 AGGAAATGGGATCGGGTAGT 57.808 50.000 0.00 0.00 0.00 2.73
2779 2866 2.224548 GGAAGGAAATGGGATCGGGTAG 60.225 54.545 0.00 0.00 0.00 3.18
2780 2867 1.772453 GGAAGGAAATGGGATCGGGTA 59.228 52.381 0.00 0.00 0.00 3.69
2781 2868 0.551396 GGAAGGAAATGGGATCGGGT 59.449 55.000 0.00 0.00 0.00 5.28
2782 2869 0.550914 TGGAAGGAAATGGGATCGGG 59.449 55.000 0.00 0.00 0.00 5.14
2783 2870 1.064758 TGTGGAAGGAAATGGGATCGG 60.065 52.381 0.00 0.00 0.00 4.18
2784 2871 2.418368 TGTGGAAGGAAATGGGATCG 57.582 50.000 0.00 0.00 0.00 3.69
2785 2872 2.423538 CGTTGTGGAAGGAAATGGGATC 59.576 50.000 0.00 0.00 0.00 3.36
2786 2873 2.225017 ACGTTGTGGAAGGAAATGGGAT 60.225 45.455 0.00 0.00 0.00 3.85
2787 2874 1.144093 ACGTTGTGGAAGGAAATGGGA 59.856 47.619 0.00 0.00 0.00 4.37
2788 2875 1.539827 GACGTTGTGGAAGGAAATGGG 59.460 52.381 0.00 0.00 0.00 4.00
2789 2876 1.539827 GGACGTTGTGGAAGGAAATGG 59.460 52.381 0.00 0.00 0.00 3.16
2790 2877 1.539827 GGGACGTTGTGGAAGGAAATG 59.460 52.381 0.00 0.00 0.00 2.32
2791 2878 1.423921 AGGGACGTTGTGGAAGGAAAT 59.576 47.619 0.00 0.00 0.00 2.17
2792 2879 0.841289 AGGGACGTTGTGGAAGGAAA 59.159 50.000 0.00 0.00 0.00 3.13
2793 2880 0.841289 AAGGGACGTTGTGGAAGGAA 59.159 50.000 0.00 0.00 0.00 3.36
2794 2881 0.395312 GAAGGGACGTTGTGGAAGGA 59.605 55.000 0.00 0.00 0.00 3.36
2795 2882 0.396811 AGAAGGGACGTTGTGGAAGG 59.603 55.000 0.00 0.00 0.00 3.46
2796 2883 1.608283 GGAGAAGGGACGTTGTGGAAG 60.608 57.143 0.00 0.00 0.00 3.46
2797 2884 0.395312 GGAGAAGGGACGTTGTGGAA 59.605 55.000 0.00 0.00 0.00 3.53
2798 2885 0.471211 AGGAGAAGGGACGTTGTGGA 60.471 55.000 0.00 0.00 0.00 4.02
2799 2886 0.037232 GAGGAGAAGGGACGTTGTGG 60.037 60.000 0.00 0.00 0.00 4.17
2800 2887 0.037232 GGAGGAGAAGGGACGTTGTG 60.037 60.000 0.00 0.00 0.00 3.33
2801 2888 0.178929 AGGAGGAGAAGGGACGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
2802 2889 0.977395 AAGGAGGAGAAGGGACGTTG 59.023 55.000 0.00 0.00 0.00 4.10
2803 2890 2.177734 GTAAGGAGGAGAAGGGACGTT 58.822 52.381 0.00 0.00 0.00 3.99
2804 2891 1.358445 AGTAAGGAGGAGAAGGGACGT 59.642 52.381 0.00 0.00 0.00 4.34
2805 2892 2.146920 AGTAAGGAGGAGAAGGGACG 57.853 55.000 0.00 0.00 0.00 4.79
2806 2893 3.620226 GCAAAGTAAGGAGGAGAAGGGAC 60.620 52.174 0.00 0.00 0.00 4.46
2807 2894 2.572104 GCAAAGTAAGGAGGAGAAGGGA 59.428 50.000 0.00 0.00 0.00 4.20
2808 2895 2.305927 TGCAAAGTAAGGAGGAGAAGGG 59.694 50.000 0.00 0.00 0.00 3.95
2809 2896 3.339141 GTGCAAAGTAAGGAGGAGAAGG 58.661 50.000 0.00 0.00 0.00 3.46
2810 2897 3.339141 GGTGCAAAGTAAGGAGGAGAAG 58.661 50.000 0.00 0.00 0.00 2.85
2811 2898 2.039879 GGGTGCAAAGTAAGGAGGAGAA 59.960 50.000 0.00 0.00 0.00 2.87
2812 2899 1.628846 GGGTGCAAAGTAAGGAGGAGA 59.371 52.381 0.00 0.00 0.00 3.71
2813 2900 1.676014 CGGGTGCAAAGTAAGGAGGAG 60.676 57.143 0.00 0.00 0.00 3.69
2814 2901 0.323629 CGGGTGCAAAGTAAGGAGGA 59.676 55.000 0.00 0.00 0.00 3.71
2815 2902 1.305930 GCGGGTGCAAAGTAAGGAGG 61.306 60.000 0.00 0.00 42.15 4.30
2816 2903 2.171635 GCGGGTGCAAAGTAAGGAG 58.828 57.895 0.00 0.00 42.15 3.69
2817 2904 4.390048 GCGGGTGCAAAGTAAGGA 57.610 55.556 0.00 0.00 42.15 3.36
2850 2937 4.430765 AGAGGTACAACGGCGGCG 62.431 66.667 31.06 31.06 0.00 6.46
2851 2938 2.508663 GAGAGGTACAACGGCGGC 60.509 66.667 13.24 0.00 0.00 6.53
2852 2939 2.183555 GGAGAGGTACAACGGCGG 59.816 66.667 13.24 0.00 0.00 6.13
2853 2940 1.445582 GTGGAGAGGTACAACGGCG 60.446 63.158 4.80 4.80 0.00 6.46
2854 2941 1.079336 GGTGGAGAGGTACAACGGC 60.079 63.158 0.00 0.00 0.00 5.68
2855 2942 1.595357 GGGTGGAGAGGTACAACGG 59.405 63.158 0.00 0.00 0.00 4.44
2856 2943 1.214589 CGGGTGGAGAGGTACAACG 59.785 63.158 0.00 0.00 0.00 4.10
2857 2944 1.079336 GCGGGTGGAGAGGTACAAC 60.079 63.158 0.00 0.00 0.00 3.32
2858 2945 2.288025 GGCGGGTGGAGAGGTACAA 61.288 63.158 0.00 0.00 0.00 2.41
2859 2946 2.682494 GGCGGGTGGAGAGGTACA 60.682 66.667 0.00 0.00 0.00 2.90
2860 2947 2.682494 TGGCGGGTGGAGAGGTAC 60.682 66.667 0.00 0.00 0.00 3.34
2861 2948 2.682494 GTGGCGGGTGGAGAGGTA 60.682 66.667 0.00 0.00 0.00 3.08
2862 2949 4.954118 TGTGGCGGGTGGAGAGGT 62.954 66.667 0.00 0.00 0.00 3.85
2863 2950 3.190738 TTTGTGGCGGGTGGAGAGG 62.191 63.158 0.00 0.00 0.00 3.69
2864 2951 1.672356 CTTTGTGGCGGGTGGAGAG 60.672 63.158 0.00 0.00 0.00 3.20
2865 2952 2.429930 CTTTGTGGCGGGTGGAGA 59.570 61.111 0.00 0.00 0.00 3.71
2866 2953 2.672996 CCTTTGTGGCGGGTGGAG 60.673 66.667 0.00 0.00 0.00 3.86
2878 2965 0.317770 AACGTGCGACAATGCCTTTG 60.318 50.000 0.00 0.00 41.36 2.77
2879 2966 0.040425 GAACGTGCGACAATGCCTTT 60.040 50.000 0.00 0.00 0.00 3.11
2880 2967 1.574428 GAACGTGCGACAATGCCTT 59.426 52.632 0.00 0.00 0.00 4.35
2881 2968 2.667318 CGAACGTGCGACAATGCCT 61.667 57.895 11.51 0.00 0.00 4.75
2882 2969 2.202171 CGAACGTGCGACAATGCC 60.202 61.111 11.51 0.00 0.00 4.40
2883 2970 2.865151 GCGAACGTGCGACAATGC 60.865 61.111 22.89 0.00 0.00 3.56
2884 2971 1.083080 TTGCGAACGTGCGACAATG 60.083 52.632 22.89 0.00 37.81 2.82
2885 2972 1.083015 GTTGCGAACGTGCGACAAT 60.083 52.632 22.89 0.00 46.47 2.71
2886 2973 2.321740 GTTGCGAACGTGCGACAA 59.678 55.556 22.89 19.83 46.47 3.18
2888 2975 3.558282 CTGGTTGCGAACGTGCGAC 62.558 63.158 22.89 14.92 46.49 5.19
2889 2976 3.334751 CTGGTTGCGAACGTGCGA 61.335 61.111 22.89 0.92 37.81 5.10
2891 2978 3.947841 TGCTGGTTGCGAACGTGC 61.948 61.111 0.00 0.35 46.63 5.34
2892 2979 2.052237 GTGCTGGTTGCGAACGTG 60.052 61.111 0.00 0.00 46.63 4.49
2893 2980 3.276846 GGTGCTGGTTGCGAACGT 61.277 61.111 0.00 0.00 46.63 3.99
2894 2981 4.368808 CGGTGCTGGTTGCGAACG 62.369 66.667 0.00 0.00 46.63 3.95
2895 2982 2.970324 TCGGTGCTGGTTGCGAAC 60.970 61.111 0.00 0.00 46.63 3.95
2896 2983 2.970324 GTCGGTGCTGGTTGCGAA 60.970 61.111 0.00 0.00 46.63 4.70
2916 3003 4.807039 TCGTAAAGGCGAGCGGGC 62.807 66.667 0.00 0.00 42.69 6.13
2917 3004 2.106332 ATCGTAAAGGCGAGCGGG 59.894 61.111 0.00 0.00 44.43 6.13
2918 3005 2.237751 CCATCGTAAAGGCGAGCGG 61.238 63.158 0.00 0.00 44.43 5.52
2919 3006 2.871427 GCCATCGTAAAGGCGAGCG 61.871 63.158 0.00 0.00 44.43 5.03
2920 3007 3.014856 GCCATCGTAAAGGCGAGC 58.985 61.111 0.00 0.00 44.43 5.03
2925 3012 1.429148 GGACAGCGCCATCGTAAAGG 61.429 60.000 2.29 0.00 38.14 3.11
2926 3013 0.739462 TGGACAGCGCCATCGTAAAG 60.739 55.000 2.29 0.00 38.14 1.85
2927 3014 1.017177 GTGGACAGCGCCATCGTAAA 61.017 55.000 2.29 0.00 40.68 2.01
2928 3015 1.447140 GTGGACAGCGCCATCGTAA 60.447 57.895 2.29 0.00 40.68 3.18
2929 3016 2.183300 GTGGACAGCGCCATCGTA 59.817 61.111 2.29 0.00 40.68 3.43
2930 3017 4.760047 GGTGGACAGCGCCATCGT 62.760 66.667 2.29 0.00 40.68 3.73
2932 3019 4.101448 AGGGTGGACAGCGCCATC 62.101 66.667 2.29 0.81 40.68 3.51
2933 3020 4.415150 CAGGGTGGACAGCGCCAT 62.415 66.667 2.29 0.00 40.68 4.40
2936 3023 4.767255 CTCCAGGGTGGACAGCGC 62.767 72.222 0.00 0.00 42.67 5.92
2937 3024 4.767255 GCTCCAGGGTGGACAGCG 62.767 72.222 0.00 0.00 42.67 5.18
2938 3025 4.416738 GGCTCCAGGGTGGACAGC 62.417 72.222 0.00 0.00 42.67 4.40
2939 3026 1.856539 AATGGCTCCAGGGTGGACAG 61.857 60.000 0.00 0.00 42.67 3.51
2940 3027 1.434513 AAATGGCTCCAGGGTGGACA 61.435 55.000 0.00 0.00 42.67 4.02
2941 3028 0.967380 CAAATGGCTCCAGGGTGGAC 60.967 60.000 0.00 0.00 42.67 4.02
2942 3029 1.383799 CAAATGGCTCCAGGGTGGA 59.616 57.895 0.00 0.00 45.98 4.02
2943 3030 0.331278 TACAAATGGCTCCAGGGTGG 59.669 55.000 0.00 0.00 39.43 4.61
2944 3031 1.463674 GTACAAATGGCTCCAGGGTG 58.536 55.000 0.00 0.00 0.00 4.61
2945 3032 0.331616 GGTACAAATGGCTCCAGGGT 59.668 55.000 0.00 0.00 0.00 4.34
2946 3033 0.331278 TGGTACAAATGGCTCCAGGG 59.669 55.000 0.00 0.00 31.92 4.45
2947 3034 1.755179 CTGGTACAAATGGCTCCAGG 58.245 55.000 0.00 0.00 41.10 4.45
2948 3035 1.004745 ACCTGGTACAAATGGCTCCAG 59.995 52.381 0.00 0.00 43.46 3.86
2949 3036 1.072266 ACCTGGTACAAATGGCTCCA 58.928 50.000 0.00 0.00 38.70 3.86
2950 3037 2.026636 TGTACCTGGTACAAATGGCTCC 60.027 50.000 31.82 6.98 44.56 4.70
2951 3038 3.343941 TGTACCTGGTACAAATGGCTC 57.656 47.619 31.82 7.66 44.56 4.70
2959 3046 1.252904 GGCGGAGTGTACCTGGTACA 61.253 60.000 30.66 30.66 45.20 2.90
2960 3047 1.514553 GGCGGAGTGTACCTGGTAC 59.485 63.158 26.43 26.43 39.24 3.34
2961 3048 1.683365 GGGCGGAGTGTACCTGGTA 60.683 63.158 1.49 1.49 0.00 3.25
2962 3049 3.001406 GGGCGGAGTGTACCTGGT 61.001 66.667 4.05 4.05 0.00 4.00
2963 3050 3.782443 GGGGCGGAGTGTACCTGG 61.782 72.222 0.00 0.00 0.00 4.45
2964 3051 3.782443 GGGGGCGGAGTGTACCTG 61.782 72.222 0.00 0.00 0.00 4.00
2965 3052 4.007323 AGGGGGCGGAGTGTACCT 62.007 66.667 0.00 0.00 0.00 3.08
2966 3053 3.782443 CAGGGGGCGGAGTGTACC 61.782 72.222 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.