Multiple sequence alignment - TraesCS7A01G171800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G171800 chr7A 100.000 5144 0 0 1 5144 126949948 126944805 0.000000e+00 9500.0
1 TraesCS7A01G171800 chr7A 96.309 298 11 0 404 701 4784766 4785063 1.810000e-134 490.0
2 TraesCS7A01G171800 chr7A 100.000 130 0 0 5465 5594 126944484 126944355 2.010000e-59 241.0
3 TraesCS7A01G171800 chr7A 87.562 201 22 2 1173 1373 599065052 599064855 4.360000e-56 230.0
4 TraesCS7A01G171800 chr7A 91.195 159 14 0 1215 1373 71602007 71601849 3.390000e-52 217.0
5 TraesCS7A01G171800 chr7A 80.085 236 25 3 1140 1375 645527845 645528058 7.500000e-34 156.0
6 TraesCS7A01G171800 chr7A 92.771 83 6 0 322 404 515018866 515018784 2.740000e-23 121.0
7 TraesCS7A01G171800 chr7A 92.683 82 6 0 3690 3771 581374246 581374327 9.840000e-23 119.0
8 TraesCS7A01G171800 chr7A 94.118 68 4 0 261 328 462160286 462160219 2.760000e-18 104.0
9 TraesCS7A01G171800 chr7A 91.176 68 6 0 255 322 433436713 433436780 5.970000e-15 93.5
10 TraesCS7A01G171800 chr7D 93.351 3023 135 31 745 3738 124522515 124519530 0.000000e+00 4409.0
11 TraesCS7A01G171800 chr7D 93.805 1372 39 14 3770 5133 124519437 124518104 0.000000e+00 2021.0
12 TraesCS7A01G171800 chr7D 88.973 263 14 3 1 263 124522797 124522550 1.510000e-80 311.0
13 TraesCS7A01G171800 chr7D 90.566 53 1 4 3343 3393 39136496 39136446 3.620000e-07 67.6
14 TraesCS7A01G171800 chr7D 96.875 32 0 1 700 731 534454731 534454701 1.000000e-02 52.8
15 TraesCS7A01G171800 chr7B 92.240 2938 140 34 825 3733 86229571 86226693 0.000000e+00 4082.0
16 TraesCS7A01G171800 chr7B 94.786 1381 44 15 3770 5144 86226596 86225238 0.000000e+00 2126.0
17 TraesCS7A01G171800 chr7B 96.309 298 11 0 404 701 633030877 633031174 1.810000e-134 490.0
18 TraesCS7A01G171800 chr7B 92.669 341 18 5 367 701 625247740 625247401 8.430000e-133 484.0
19 TraesCS7A01G171800 chr7B 90.226 133 10 2 5465 5594 86225231 86225099 2.680000e-38 171.0
20 TraesCS7A01G171800 chr7B 91.139 79 7 0 3693 3771 539218283 539218361 2.130000e-19 108.0
21 TraesCS7A01G171800 chr7B 95.161 62 3 0 261 322 404175815 404175876 1.280000e-16 99.0
22 TraesCS7A01G171800 chr7B 87.500 80 10 0 3692 3771 685247160 685247239 5.970000e-15 93.5
23 TraesCS7A01G171800 chr7B 92.857 56 4 0 1319 1374 603522530 603522475 1.290000e-11 82.4
24 TraesCS7A01G171800 chr7B 92.000 50 3 1 3344 3393 272770966 272770918 1.010000e-07 69.4
25 TraesCS7A01G171800 chr7B 90.566 53 3 2 3343 3393 700554105 700554157 1.010000e-07 69.4
26 TraesCS7A01G171800 chr3B 96.333 300 11 0 402 701 8462724 8463023 1.400000e-135 494.0
27 TraesCS7A01G171800 chr3B 93.902 82 5 0 320 401 12156854 12156935 2.120000e-24 124.0
28 TraesCS7A01G171800 chr3B 94.340 53 1 1 3343 3393 758725717 758725769 4.650000e-11 80.5
29 TraesCS7A01G171800 chr3B 100.000 28 0 0 701 728 134998203 134998176 1.000000e-02 52.8
30 TraesCS7A01G171800 chr5B 94.671 319 14 2 384 701 674376454 674376770 5.040000e-135 492.0
31 TraesCS7A01G171800 chr5B 93.651 63 4 0 260 322 316032513 316032575 1.660000e-15 95.3
32 TraesCS7A01G171800 chr5B 89.041 73 6 2 252 322 504946775 504946847 7.720000e-14 89.8
33 TraesCS7A01G171800 chr6B 96.309 298 11 0 404 701 551769917 551770214 1.810000e-134 490.0
34 TraesCS7A01G171800 chr6B 94.340 53 1 1 3343 3393 713501249 713501301 4.650000e-11 80.5
35 TraesCS7A01G171800 chr5A 96.309 298 11 0 404 701 139481193 139481490 1.810000e-134 490.0
36 TraesCS7A01G171800 chr5A 92.857 70 5 0 259 328 436878047 436877978 9.910000e-18 102.0
37 TraesCS7A01G171800 chr5A 96.552 58 2 0 1317 1374 131654089 131654146 4.610000e-16 97.1
38 TraesCS7A01G171800 chr5A 89.286 56 6 0 3696 3751 328931834 328931779 2.800000e-08 71.3
39 TraesCS7A01G171800 chr5A 96.970 33 0 1 700 731 383832152 383832120 3.000000e-03 54.7
40 TraesCS7A01G171800 chr1B 96.309 298 11 0 404 701 12756848 12757145 1.810000e-134 490.0
41 TraesCS7A01G171800 chr1B 96.309 298 11 0 404 701 588322416 588322713 1.810000e-134 490.0
42 TraesCS7A01G171800 chr1B 90.789 76 7 0 3696 3771 411568786 411568711 9.910000e-18 102.0
43 TraesCS7A01G171800 chr1B 80.909 110 10 7 3343 3451 544715351 544715252 6.010000e-10 76.8
44 TraesCS7A01G171800 chr1B 92.308 52 4 0 3342 3393 210180409 210180460 2.160000e-09 75.0
45 TraesCS7A01G171800 chr1B 91.071 56 3 2 3340 3393 675255061 675255006 2.160000e-09 75.0
46 TraesCS7A01G171800 chr2A 84.615 273 25 12 1032 1304 675368273 675368018 7.190000e-64 255.0
47 TraesCS7A01G171800 chr2A 92.941 85 5 1 321 405 485779857 485779940 7.610000e-24 122.0
48 TraesCS7A01G171800 chr2A 96.970 33 0 1 700 731 22592653 22592621 3.000000e-03 54.7
49 TraesCS7A01G171800 chr2A 100.000 28 0 0 700 727 714703776 714703803 1.000000e-02 52.8
50 TraesCS7A01G171800 chr4A 85.141 249 33 3 1056 1304 660092134 660091890 9.300000e-63 252.0
51 TraesCS7A01G171800 chr4A 96.000 75 3 0 327 401 543734979 543735053 7.610000e-24 122.0
52 TraesCS7A01G171800 chr4A 91.176 68 6 0 261 328 119703327 119703260 5.970000e-15 93.5
53 TraesCS7A01G171800 chr4A 91.837 49 2 2 3346 3393 58916411 58916364 3.620000e-07 67.6
54 TraesCS7A01G171800 chr3A 81.231 325 40 14 1051 1372 698038491 698038797 5.600000e-60 243.0
55 TraesCS7A01G171800 chr3A 87.065 201 23 2 1173 1373 680168621 680168424 2.030000e-54 224.0
56 TraesCS7A01G171800 chr3A 96.154 78 3 0 327 404 655728983 655728906 1.640000e-25 128.0
57 TraesCS7A01G171800 chr3A 95.161 62 3 0 261 322 630207656 630207717 1.280000e-16 99.0
58 TraesCS7A01G171800 chr3A 96.970 33 0 1 700 731 136524775 136524807 3.000000e-03 54.7
59 TraesCS7A01G171800 chr1A 79.942 344 33 13 1032 1375 425580767 425581074 2.620000e-53 220.0
60 TraesCS7A01G171800 chr1A 92.308 39 1 2 701 739 517377111 517377147 3.000000e-03 54.7
61 TraesCS7A01G171800 chr6A 85.938 192 24 2 1173 1364 16324950 16325138 9.500000e-48 202.0
62 TraesCS7A01G171800 chr6A 92.857 84 5 1 321 404 564095810 564095728 2.740000e-23 121.0
63 TraesCS7A01G171800 chr6A 91.765 85 7 0 320 404 603025483 603025399 9.840000e-23 119.0
64 TraesCS7A01G171800 chr6A 87.143 70 4 4 3343 3410 7118595 7118661 2.160000e-09 75.0
65 TraesCS7A01G171800 chr6A 96.875 32 1 0 3692 3723 511569899 511569868 3.000000e-03 54.7
66 TraesCS7A01G171800 chr1D 79.197 274 20 15 1100 1373 139011761 139011525 7.500000e-34 156.0
67 TraesCS7A01G171800 chr1D 95.349 43 2 0 3692 3734 344135216 344135258 1.010000e-07 69.4
68 TraesCS7A01G171800 chrUn 94.118 85 5 0 320 404 338020913 338020829 4.550000e-26 130.0
69 TraesCS7A01G171800 chrUn 100.000 28 0 0 3696 3723 11030542 11030515 1.000000e-02 52.8
70 TraesCS7A01G171800 chr4D 91.765 85 5 2 318 401 317234612 317234695 3.540000e-22 117.0
71 TraesCS7A01G171800 chr4B 93.421 76 5 0 3696 3771 642195646 642195571 4.580000e-21 113.0
72 TraesCS7A01G171800 chr2B 85.149 101 12 3 3672 3771 206114843 206114745 3.570000e-17 100.0
73 TraesCS7A01G171800 chr2B 91.176 68 4 1 254 319 231667405 231667472 2.150000e-14 91.6
74 TraesCS7A01G171800 chr2B 100.000 28 0 0 701 728 89552395 89552368 1.000000e-02 52.8
75 TraesCS7A01G171800 chr6D 89.474 76 8 0 3696 3771 41640902 41640827 4.610000e-16 97.1
76 TraesCS7A01G171800 chr6D 81.579 114 12 8 3343 3449 316281817 316281928 9.990000e-13 86.1
77 TraesCS7A01G171800 chr2D 87.879 66 8 0 3693 3758 106629835 106629770 1.670000e-10 78.7
78 TraesCS7A01G171800 chr2D 92.593 54 2 2 3343 3395 608801411 608801359 6.010000e-10 76.8
79 TraesCS7A01G171800 chr2D 88.333 60 6 1 1264 1323 477214001 477214059 2.800000e-08 71.3
80 TraesCS7A01G171800 chr2D 90.476 42 2 2 3692 3731 239973741 239973700 3.000000e-03 54.7
81 TraesCS7A01G171800 chr2D 100.000 29 0 0 701 729 592790403 592790431 3.000000e-03 54.7
82 TraesCS7A01G171800 chr3D 92.453 53 2 2 3342 3393 451376220 451376169 2.160000e-09 75.0
83 TraesCS7A01G171800 chr3D 88.462 52 4 1 3344 3395 57158550 57158599 1.680000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G171800 chr7A 126944355 126949948 5593 True 4870.500000 9500 100.000000 1 5594 2 chr7A.!!$R5 5593
1 TraesCS7A01G171800 chr7D 124518104 124522797 4693 True 2247.000000 4409 92.043000 1 5133 3 chr7D.!!$R3 5132
2 TraesCS7A01G171800 chr7B 86225099 86229571 4472 True 2126.333333 4082 92.417333 825 5594 3 chr7B.!!$R4 4769

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
527 528 0.036952 CCGAGCCGGCATATCATCTT 60.037 55.0 31.54 3.33 41.17 2.40 F
767 773 0.107508 ACTTGTGGCTCGGATGGATG 60.108 55.0 0.00 0.00 0.00 3.51 F
1953 1971 0.175302 TTGCCAGTTGCCACAGTTTG 59.825 50.0 0.00 0.00 40.16 2.93 F
2046 2064 1.016627 TGCAAGTGACTTGTGCAGAC 58.983 50.0 24.51 8.97 43.09 3.51 F
3333 3363 1.184431 TTACCACCAGCATGCCAATG 58.816 50.0 15.66 9.86 36.82 2.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2290 2308 0.178944 AAGGGTGGGGGTGCTTAAAC 60.179 55.000 0.00 0.0 0.00 2.01 R
2394 2413 1.425066 TGGCAGTCCAGTGGAATCTTT 59.575 47.619 15.09 0.0 37.47 2.52 R
3094 3121 0.519961 GAAAAACGGGGACACCATCG 59.480 55.000 0.00 0.0 40.22 3.84 R
3744 3788 0.750850 ACGCGGCCTCTATACAATGT 59.249 50.000 12.47 0.0 0.00 2.71 R
4620 4743 1.761449 TGTGTGCTCAAAGCCTCAAA 58.239 45.000 0.00 0.0 41.51 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
173 174 3.054655 TCCTTAATTTTCCACTCCCTCCG 60.055 47.826 0.00 0.00 0.00 4.63
231 232 9.469807 GGATGTATCTAGACATGTGTTAGAAAG 57.530 37.037 16.47 2.84 40.18 2.62
233 234 8.067751 TGTATCTAGACATGTGTTAGAAAGCT 57.932 34.615 16.47 6.81 0.00 3.74
249 250 9.699703 GTTAGAAAGCTAAGAGGTAAGATATGG 57.300 37.037 0.00 0.00 37.28 2.74
254 255 5.905913 AGCTAAGAGGTAAGATATGGGTGTT 59.094 40.000 0.00 0.00 0.00 3.32
267 268 8.611051 AGATATGGGTGTTTAGATATACTCCC 57.389 38.462 11.46 11.46 44.56 4.30
269 270 6.936968 ATGGGTGTTTAGATATACTCCCTC 57.063 41.667 16.47 0.00 44.59 4.30
270 271 5.152934 TGGGTGTTTAGATATACTCCCTCC 58.847 45.833 16.47 0.00 44.59 4.30
271 272 5.152934 GGGTGTTTAGATATACTCCCTCCA 58.847 45.833 11.22 0.00 42.25 3.86
272 273 5.785940 GGGTGTTTAGATATACTCCCTCCAT 59.214 44.000 11.22 0.00 42.25 3.41
273 274 6.070710 GGGTGTTTAGATATACTCCCTCCATC 60.071 46.154 11.22 0.00 42.25 3.51
274 275 6.070710 GGTGTTTAGATATACTCCCTCCATCC 60.071 46.154 0.00 0.00 0.00 3.51
275 276 6.497259 GTGTTTAGATATACTCCCTCCATCCA 59.503 42.308 0.00 0.00 0.00 3.41
276 277 6.726299 TGTTTAGATATACTCCCTCCATCCAG 59.274 42.308 0.00 0.00 0.00 3.86
277 278 6.736561 TTAGATATACTCCCTCCATCCAGA 57.263 41.667 0.00 0.00 0.00 3.86
278 279 5.623551 AGATATACTCCCTCCATCCAGAA 57.376 43.478 0.00 0.00 0.00 3.02
279 280 5.982391 AGATATACTCCCTCCATCCAGAAA 58.018 41.667 0.00 0.00 0.00 2.52
280 281 6.579214 AGATATACTCCCTCCATCCAGAAAT 58.421 40.000 0.00 0.00 0.00 2.17
281 282 7.723382 AGATATACTCCCTCCATCCAGAAATA 58.277 38.462 0.00 0.00 0.00 1.40
282 283 8.358344 AGATATACTCCCTCCATCCAGAAATAT 58.642 37.037 0.00 0.00 0.00 1.28
283 284 8.940012 ATATACTCCCTCCATCCAGAAATATT 57.060 34.615 0.00 0.00 0.00 1.28
284 285 7.654287 ATACTCCCTCCATCCAGAAATATTT 57.346 36.000 0.00 0.00 0.00 1.40
285 286 5.699143 ACTCCCTCCATCCAGAAATATTTG 58.301 41.667 5.17 0.00 0.00 2.32
286 287 5.194537 ACTCCCTCCATCCAGAAATATTTGT 59.805 40.000 5.17 0.00 0.00 2.83
287 288 5.694995 TCCCTCCATCCAGAAATATTTGTC 58.305 41.667 5.17 0.00 0.00 3.18
288 289 5.193527 TCCCTCCATCCAGAAATATTTGTCA 59.806 40.000 5.17 0.00 0.00 3.58
289 290 6.073314 CCCTCCATCCAGAAATATTTGTCAT 58.927 40.000 5.17 0.00 0.00 3.06
290 291 6.208204 CCCTCCATCCAGAAATATTTGTCATC 59.792 42.308 5.17 0.00 0.00 2.92
291 292 6.774170 CCTCCATCCAGAAATATTTGTCATCA 59.226 38.462 5.17 0.00 0.00 3.07
292 293 7.286087 CCTCCATCCAGAAATATTTGTCATCAA 59.714 37.037 5.17 0.00 0.00 2.57
293 294 8.592529 TCCATCCAGAAATATTTGTCATCAAA 57.407 30.769 5.17 0.00 45.71 2.69
294 295 9.033711 TCCATCCAGAAATATTTGTCATCAAAA 57.966 29.630 5.17 0.00 44.97 2.44
295 296 9.826574 CCATCCAGAAATATTTGTCATCAAAAT 57.173 29.630 5.17 0.00 44.97 1.82
297 298 9.826574 ATCCAGAAATATTTGTCATCAAAATGG 57.173 29.630 5.17 0.00 44.97 3.16
298 299 9.033711 TCCAGAAATATTTGTCATCAAAATGGA 57.966 29.630 5.17 0.00 44.97 3.41
299 300 9.826574 CCAGAAATATTTGTCATCAAAATGGAT 57.173 29.630 5.17 0.00 44.97 3.41
307 308 9.880157 ATTTGTCATCAAAATGGATAAAAGGAG 57.120 29.630 0.00 0.00 44.97 3.69
308 309 8.648698 TTGTCATCAAAATGGATAAAAGGAGA 57.351 30.769 0.00 0.00 33.42 3.71
309 310 8.827832 TGTCATCAAAATGGATAAAAGGAGAT 57.172 30.769 0.00 0.00 33.42 2.75
310 311 8.689061 TGTCATCAAAATGGATAAAAGGAGATG 58.311 33.333 0.00 0.00 33.42 2.90
311 312 8.689972 GTCATCAAAATGGATAAAAGGAGATGT 58.310 33.333 0.00 0.00 33.42 3.06
312 313 9.919416 TCATCAAAATGGATAAAAGGAGATGTA 57.081 29.630 0.00 0.00 33.42 2.29
315 316 9.056005 TCAAAATGGATAAAAGGAGATGTATCG 57.944 33.333 0.00 0.00 0.00 2.92
316 317 9.056005 CAAAATGGATAAAAGGAGATGTATCGA 57.944 33.333 0.00 0.00 0.00 3.59
317 318 8.839310 AAATGGATAAAAGGAGATGTATCGAG 57.161 34.615 0.00 0.00 0.00 4.04
318 319 7.782897 ATGGATAAAAGGAGATGTATCGAGA 57.217 36.000 0.00 0.00 0.00 4.04
319 320 7.782897 TGGATAAAAGGAGATGTATCGAGAT 57.217 36.000 0.00 0.00 0.00 2.75
320 321 7.606349 TGGATAAAAGGAGATGTATCGAGATG 58.394 38.462 0.00 0.00 0.00 2.90
321 322 7.233553 TGGATAAAAGGAGATGTATCGAGATGT 59.766 37.037 0.00 0.00 0.00 3.06
322 323 8.091449 GGATAAAAGGAGATGTATCGAGATGTT 58.909 37.037 0.00 0.00 0.00 2.71
323 324 9.482627 GATAAAAGGAGATGTATCGAGATGTTT 57.517 33.333 0.00 0.00 0.00 2.83
326 327 9.838339 AAAAGGAGATGTATCGAGATGTTTATT 57.162 29.630 0.00 0.00 0.00 1.40
328 329 9.915629 AAGGAGATGTATCGAGATGTTTATTAC 57.084 33.333 0.00 0.00 0.00 1.89
329 330 9.303116 AGGAGATGTATCGAGATGTTTATTACT 57.697 33.333 0.00 0.00 0.00 2.24
330 331 9.562583 GGAGATGTATCGAGATGTTTATTACTC 57.437 37.037 0.00 0.00 0.00 2.59
331 332 9.562583 GAGATGTATCGAGATGTTTATTACTCC 57.437 37.037 0.00 0.00 0.00 3.85
332 333 8.524487 AGATGTATCGAGATGTTTATTACTCCC 58.476 37.037 0.00 0.00 0.00 4.30
333 334 7.834881 TGTATCGAGATGTTTATTACTCCCT 57.165 36.000 0.00 0.00 0.00 4.20
334 335 7.883217 TGTATCGAGATGTTTATTACTCCCTC 58.117 38.462 0.00 0.00 0.00 4.30
335 336 5.786264 TCGAGATGTTTATTACTCCCTCC 57.214 43.478 0.00 0.00 0.00 4.30
336 337 5.205821 TCGAGATGTTTATTACTCCCTCCA 58.794 41.667 0.00 0.00 0.00 3.86
337 338 5.839063 TCGAGATGTTTATTACTCCCTCCAT 59.161 40.000 0.00 0.00 0.00 3.41
338 339 6.326583 TCGAGATGTTTATTACTCCCTCCATT 59.673 38.462 0.00 0.00 0.00 3.16
339 340 6.647067 CGAGATGTTTATTACTCCCTCCATTC 59.353 42.308 0.00 0.00 0.00 2.67
340 341 7.472100 CGAGATGTTTATTACTCCCTCCATTCT 60.472 40.741 0.00 0.00 0.00 2.40
341 342 8.798975 AGATGTTTATTACTCCCTCCATTCTA 57.201 34.615 0.00 0.00 0.00 2.10
342 343 9.225682 AGATGTTTATTACTCCCTCCATTCTAA 57.774 33.333 0.00 0.00 0.00 2.10
343 344 9.847224 GATGTTTATTACTCCCTCCATTCTAAA 57.153 33.333 0.00 0.00 0.00 1.85
350 351 6.163135 ACTCCCTCCATTCTAAATTACTCG 57.837 41.667 0.00 0.00 0.00 4.18
351 352 5.661759 ACTCCCTCCATTCTAAATTACTCGT 59.338 40.000 0.00 0.00 0.00 4.18
352 353 6.158023 TCCCTCCATTCTAAATTACTCGTC 57.842 41.667 0.00 0.00 0.00 4.20
353 354 4.982916 CCCTCCATTCTAAATTACTCGTCG 59.017 45.833 0.00 0.00 0.00 5.12
354 355 4.444720 CCTCCATTCTAAATTACTCGTCGC 59.555 45.833 0.00 0.00 0.00 5.19
355 356 5.001237 TCCATTCTAAATTACTCGTCGCA 57.999 39.130 0.00 0.00 0.00 5.10
356 357 5.041287 TCCATTCTAAATTACTCGTCGCAG 58.959 41.667 0.00 0.00 0.00 5.18
357 358 5.041287 CCATTCTAAATTACTCGTCGCAGA 58.959 41.667 0.00 0.00 0.00 4.26
358 359 5.518847 CCATTCTAAATTACTCGTCGCAGAA 59.481 40.000 0.00 0.00 39.69 3.02
359 360 6.035650 CCATTCTAAATTACTCGTCGCAGAAA 59.964 38.462 0.00 0.00 39.69 2.52
360 361 7.254455 CCATTCTAAATTACTCGTCGCAGAAAT 60.254 37.037 0.00 0.00 39.69 2.17
361 362 6.569228 TCTAAATTACTCGTCGCAGAAATG 57.431 37.500 0.00 0.00 39.69 2.32
362 363 4.600012 AAATTACTCGTCGCAGAAATGG 57.400 40.909 0.00 0.00 39.69 3.16
363 364 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
364 365 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
365 366 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
366 367 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
367 368 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
368 369 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
369 370 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
370 371 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
371 372 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
372 373 4.383052 CGTCGCAGAAATGGATGTATCTAC 59.617 45.833 0.00 0.00 39.69 2.59
373 374 5.289595 GTCGCAGAAATGGATGTATCTACA 58.710 41.667 0.00 0.00 39.69 2.74
374 375 5.753438 GTCGCAGAAATGGATGTATCTACAA 59.247 40.000 0.00 0.00 39.69 2.41
375 376 5.753438 TCGCAGAAATGGATGTATCTACAAC 59.247 40.000 0.00 0.00 39.99 3.32
376 377 5.050091 CGCAGAAATGGATGTATCTACAACC 60.050 44.000 9.13 9.13 45.97 3.77
430 431 3.250762 TGAGCATCAGTACAAACACAAGC 59.749 43.478 0.00 0.00 42.56 4.01
431 432 2.224079 AGCATCAGTACAAACACAAGCG 59.776 45.455 0.00 0.00 0.00 4.68
432 433 2.574322 CATCAGTACAAACACAAGCGC 58.426 47.619 0.00 0.00 0.00 5.92
433 434 1.948104 TCAGTACAAACACAAGCGCT 58.052 45.000 2.64 2.64 0.00 5.92
434 435 1.864711 TCAGTACAAACACAAGCGCTC 59.135 47.619 12.06 0.00 0.00 5.03
435 436 1.597195 CAGTACAAACACAAGCGCTCA 59.403 47.619 12.06 0.00 0.00 4.26
436 437 2.224079 CAGTACAAACACAAGCGCTCAT 59.776 45.455 12.06 0.00 0.00 2.90
437 438 3.431912 CAGTACAAACACAAGCGCTCATA 59.568 43.478 12.06 0.00 0.00 2.15
438 439 4.093408 CAGTACAAACACAAGCGCTCATAT 59.907 41.667 12.06 0.00 0.00 1.78
439 440 5.290885 CAGTACAAACACAAGCGCTCATATA 59.709 40.000 12.06 0.00 0.00 0.86
440 441 4.600012 ACAAACACAAGCGCTCATATAC 57.400 40.909 12.06 0.00 0.00 1.47
441 442 4.000325 ACAAACACAAGCGCTCATATACA 59.000 39.130 12.06 0.00 0.00 2.29
442 443 4.142902 ACAAACACAAGCGCTCATATACAC 60.143 41.667 12.06 0.00 0.00 2.90
443 444 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
447 448 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
448 449 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
449 450 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
450 451 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
451 452 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
452 453 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
453 454 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
454 455 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
455 456 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
456 457 2.509052 ATACACGCGCATACACTCAT 57.491 45.000 5.73 0.00 0.00 2.90
457 458 1.835121 TACACGCGCATACACTCATC 58.165 50.000 5.73 0.00 0.00 2.92
458 459 0.806102 ACACGCGCATACACTCATCC 60.806 55.000 5.73 0.00 0.00 3.51
459 460 1.227263 ACGCGCATACACTCATCCC 60.227 57.895 5.73 0.00 0.00 3.85
460 461 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
461 462 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
462 463 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
463 464 2.341257 GCGCATACACTCATCCCTATG 58.659 52.381 0.30 0.00 0.00 2.23
464 465 2.029020 GCGCATACACTCATCCCTATGA 60.029 50.000 0.30 0.00 39.87 2.15
465 466 3.554960 GCGCATACACTCATCCCTATGAA 60.555 47.826 0.30 0.00 41.57 2.57
466 467 3.990469 CGCATACACTCATCCCTATGAAC 59.010 47.826 0.00 0.00 41.57 3.18
467 468 3.990469 GCATACACTCATCCCTATGAACG 59.010 47.826 0.00 0.00 41.57 3.95
468 469 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
469 470 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
470 471 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
471 472 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
472 473 2.435805 ACTCATCCCTATGAACGCACAT 59.564 45.455 0.94 0.94 41.57 3.21
473 474 3.641436 ACTCATCCCTATGAACGCACATA 59.359 43.478 2.94 2.94 41.57 2.29
474 475 3.990092 TCATCCCTATGAACGCACATAC 58.010 45.455 0.00 0.00 39.20 2.39
475 476 2.502213 TCCCTATGAACGCACATACG 57.498 50.000 0.00 0.00 39.50 3.06
476 477 0.859232 CCCTATGAACGCACATACGC 59.141 55.000 0.00 0.00 36.19 4.42
477 478 1.566404 CCTATGAACGCACATACGCA 58.434 50.000 0.00 0.00 36.19 5.24
478 479 1.257936 CCTATGAACGCACATACGCAC 59.742 52.381 0.00 0.00 36.19 5.34
479 480 1.923864 CTATGAACGCACATACGCACA 59.076 47.619 0.00 0.00 36.19 4.57
480 481 0.442310 ATGAACGCACATACGCACAC 59.558 50.000 0.00 0.00 36.19 3.82
481 482 1.131826 GAACGCACATACGCACACC 59.868 57.895 0.00 0.00 36.19 4.16
482 483 2.235536 GAACGCACATACGCACACCC 62.236 60.000 0.00 0.00 36.19 4.61
483 484 2.434185 CGCACATACGCACACCCT 60.434 61.111 0.00 0.00 0.00 4.34
484 485 1.153726 CGCACATACGCACACCCTA 60.154 57.895 0.00 0.00 0.00 3.53
485 486 1.418342 CGCACATACGCACACCCTAC 61.418 60.000 0.00 0.00 0.00 3.18
486 487 1.087771 GCACATACGCACACCCTACC 61.088 60.000 0.00 0.00 0.00 3.18
487 488 0.461339 CACATACGCACACCCTACCC 60.461 60.000 0.00 0.00 0.00 3.69
488 489 1.145377 CATACGCACACCCTACCCC 59.855 63.158 0.00 0.00 0.00 4.95
489 490 1.002533 ATACGCACACCCTACCCCT 59.997 57.895 0.00 0.00 0.00 4.79
490 491 0.262580 ATACGCACACCCTACCCCTA 59.737 55.000 0.00 0.00 0.00 3.53
491 492 0.262580 TACGCACACCCTACCCCTAT 59.737 55.000 0.00 0.00 0.00 2.57
492 493 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
493 494 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
494 495 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
495 496 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
496 497 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
497 498 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
498 499 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
499 500 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
500 501 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
501 502 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
502 503 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
503 504 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
504 505 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
505 506 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
506 507 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
507 508 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
508 509 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
509 510 1.040339 ATGAGCACCTCCGAGAGACC 61.040 60.000 0.00 0.00 0.00 3.85
510 511 2.752238 AGCACCTCCGAGAGACCG 60.752 66.667 0.00 0.00 0.00 4.79
511 512 2.750637 GCACCTCCGAGAGACCGA 60.751 66.667 0.00 0.00 0.00 4.69
512 513 2.766400 GCACCTCCGAGAGACCGAG 61.766 68.421 0.00 0.00 0.00 4.63
513 514 2.438795 ACCTCCGAGAGACCGAGC 60.439 66.667 0.00 0.00 0.00 5.03
514 515 3.213402 CCTCCGAGAGACCGAGCC 61.213 72.222 0.00 0.00 0.00 4.70
515 516 3.578272 CTCCGAGAGACCGAGCCG 61.578 72.222 0.00 0.00 0.00 5.52
525 526 4.192000 CCGAGCCGGCATATCATC 57.808 61.111 31.54 15.45 41.17 2.92
526 527 1.593787 CCGAGCCGGCATATCATCT 59.406 57.895 31.54 4.27 41.17 2.90
527 528 0.036952 CCGAGCCGGCATATCATCTT 60.037 55.000 31.54 3.33 41.17 2.40
528 529 1.073964 CGAGCCGGCATATCATCTTG 58.926 55.000 31.54 4.88 0.00 3.02
529 530 1.337167 CGAGCCGGCATATCATCTTGA 60.337 52.381 31.54 0.00 0.00 3.02
530 531 2.344950 GAGCCGGCATATCATCTTGAG 58.655 52.381 31.54 0.00 0.00 3.02
531 532 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
532 533 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
533 534 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
534 535 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
535 536 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
536 537 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
537 538 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
538 539 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
539 540 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
540 541 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
541 542 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
542 543 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
543 544 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
544 545 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
545 546 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
546 547 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
547 548 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
548 549 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
549 550 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
562 563 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
563 564 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
568 569 4.813526 CGCCTCGTCGTCGACAGG 62.814 72.222 26.42 26.42 41.35 4.00
569 570 3.429141 GCCTCGTCGTCGACAGGA 61.429 66.667 31.08 19.58 41.35 3.86
570 571 2.974489 GCCTCGTCGTCGACAGGAA 61.974 63.158 31.08 14.07 41.35 3.36
571 572 1.154263 CCTCGTCGTCGACAGGAAC 60.154 63.158 26.56 6.82 41.35 3.62
572 573 1.509370 CTCGTCGTCGACAGGAACG 60.509 63.158 24.13 17.77 41.35 3.95
573 574 2.167808 CTCGTCGTCGACAGGAACGT 62.168 60.000 24.13 0.00 41.35 3.99
574 575 1.791283 CGTCGTCGACAGGAACGTC 60.791 63.158 24.13 0.00 39.71 4.34
575 576 1.573436 GTCGTCGACAGGAACGTCT 59.427 57.895 20.28 0.00 33.54 4.18
576 577 0.452452 GTCGTCGACAGGAACGTCTC 60.452 60.000 20.28 0.00 33.54 3.36
577 578 1.154263 CGTCGACAGGAACGTCTCC 60.154 63.158 17.16 8.26 45.81 3.71
584 585 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
585 586 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
586 587 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
587 588 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
588 589 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
589 590 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
590 591 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
591 592 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
592 593 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
593 594 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
594 595 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
595 596 0.962356 CCTCCCACTGAAAGCGCATT 60.962 55.000 11.47 2.75 37.60 3.56
596 597 0.169672 CTCCCACTGAAAGCGCATTG 59.830 55.000 11.47 0.00 37.60 2.82
597 598 1.444895 CCCACTGAAAGCGCATTGC 60.445 57.895 11.47 0.00 46.98 3.56
606 607 2.278792 GCGCATTGCCGGAAATCC 60.279 61.111 4.04 0.00 37.76 3.01
607 608 2.774799 GCGCATTGCCGGAAATCCT 61.775 57.895 4.04 0.00 37.76 3.24
608 609 1.064621 CGCATTGCCGGAAATCCTG 59.935 57.895 4.04 0.00 0.00 3.86
609 610 1.375853 CGCATTGCCGGAAATCCTGA 61.376 55.000 4.04 0.00 0.00 3.86
610 611 0.817013 GCATTGCCGGAAATCCTGAA 59.183 50.000 4.04 0.00 0.00 3.02
611 612 1.204467 GCATTGCCGGAAATCCTGAAA 59.796 47.619 4.04 0.00 0.00 2.69
612 613 2.159057 GCATTGCCGGAAATCCTGAAAT 60.159 45.455 4.04 0.00 0.00 2.17
613 614 3.068024 GCATTGCCGGAAATCCTGAAATA 59.932 43.478 4.04 0.00 0.00 1.40
614 615 4.441356 GCATTGCCGGAAATCCTGAAATAA 60.441 41.667 4.04 0.00 0.00 1.40
615 616 5.659463 CATTGCCGGAAATCCTGAAATAAA 58.341 37.500 4.04 0.00 0.00 1.40
616 617 5.930837 TTGCCGGAAATCCTGAAATAAAT 57.069 34.783 5.05 0.00 0.00 1.40
617 618 5.514274 TGCCGGAAATCCTGAAATAAATC 57.486 39.130 5.05 0.00 0.00 2.17
618 619 4.340950 TGCCGGAAATCCTGAAATAAATCC 59.659 41.667 5.05 0.00 0.00 3.01
619 620 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
620 621 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
621 622 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
631 632 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
632 633 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
633 634 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
634 635 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
635 636 2.936919 TCCAGGAATAATGCGAGCAT 57.063 45.000 4.52 4.52 38.46 3.79
636 637 2.771089 TCCAGGAATAATGCGAGCATC 58.229 47.619 11.26 0.00 35.31 3.91
637 638 2.104622 TCCAGGAATAATGCGAGCATCA 59.895 45.455 11.26 0.00 35.31 3.07
638 639 2.483106 CCAGGAATAATGCGAGCATCAG 59.517 50.000 11.26 0.00 35.31 2.90
639 640 2.483106 CAGGAATAATGCGAGCATCAGG 59.517 50.000 11.26 0.00 35.31 3.86
640 641 2.369860 AGGAATAATGCGAGCATCAGGA 59.630 45.455 11.26 0.00 35.31 3.86
641 642 3.008813 AGGAATAATGCGAGCATCAGGAT 59.991 43.478 11.26 0.00 35.31 3.24
642 643 3.755378 GGAATAATGCGAGCATCAGGATT 59.245 43.478 11.26 8.63 35.31 3.01
643 644 4.217118 GGAATAATGCGAGCATCAGGATTT 59.783 41.667 11.26 0.00 35.31 2.17
644 645 4.761235 ATAATGCGAGCATCAGGATTTG 57.239 40.909 11.26 0.00 35.31 2.32
645 646 2.336945 ATGCGAGCATCAGGATTTGA 57.663 45.000 4.52 0.00 40.85 2.69
646 647 2.112380 TGCGAGCATCAGGATTTGAA 57.888 45.000 0.00 0.00 39.77 2.69
647 648 1.739466 TGCGAGCATCAGGATTTGAAC 59.261 47.619 0.00 0.00 39.77 3.18
648 649 1.064654 GCGAGCATCAGGATTTGAACC 59.935 52.381 0.00 0.00 39.77 3.62
649 650 1.672881 CGAGCATCAGGATTTGAACCC 59.327 52.381 0.00 0.00 39.77 4.11
650 651 2.681976 CGAGCATCAGGATTTGAACCCT 60.682 50.000 0.00 0.00 39.77 4.34
655 656 2.584835 CAGGATTTGAACCCTGGTGA 57.415 50.000 0.00 0.00 44.68 4.02
656 657 2.440409 CAGGATTTGAACCCTGGTGAG 58.560 52.381 0.00 0.00 44.68 3.51
657 658 2.065799 AGGATTTGAACCCTGGTGAGT 58.934 47.619 0.00 0.00 0.00 3.41
658 659 2.447047 AGGATTTGAACCCTGGTGAGTT 59.553 45.455 0.00 0.00 0.00 3.01
659 660 2.558359 GGATTTGAACCCTGGTGAGTTG 59.442 50.000 0.00 0.00 0.00 3.16
660 661 2.065899 TTTGAACCCTGGTGAGTTGG 57.934 50.000 0.00 0.00 0.00 3.77
661 662 0.184933 TTGAACCCTGGTGAGTTGGG 59.815 55.000 0.00 0.00 46.07 4.12
662 663 1.074951 GAACCCTGGTGAGTTGGGG 59.925 63.158 0.00 0.00 44.97 4.96
663 664 1.386772 AACCCTGGTGAGTTGGGGA 60.387 57.895 3.72 0.00 44.97 4.81
664 665 0.776080 AACCCTGGTGAGTTGGGGAT 60.776 55.000 3.72 0.00 44.97 3.85
665 666 0.120377 ACCCTGGTGAGTTGGGGATA 59.880 55.000 3.72 0.00 44.97 2.59
666 667 0.546598 CCCTGGTGAGTTGGGGATAC 59.453 60.000 0.00 0.00 41.25 2.24
681 682 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
682 683 2.169978 GGATACCACTGTCCACCTAACC 59.830 54.545 0.00 0.00 34.57 2.85
683 684 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
684 685 1.513858 ACCACTGTCCACCTAACCAA 58.486 50.000 0.00 0.00 0.00 3.67
685 686 2.062636 ACCACTGTCCACCTAACCAAT 58.937 47.619 0.00 0.00 0.00 3.16
686 687 2.445525 ACCACTGTCCACCTAACCAATT 59.554 45.455 0.00 0.00 0.00 2.32
687 688 3.081804 CCACTGTCCACCTAACCAATTC 58.918 50.000 0.00 0.00 0.00 2.17
688 689 3.497763 CCACTGTCCACCTAACCAATTCA 60.498 47.826 0.00 0.00 0.00 2.57
689 690 4.141287 CACTGTCCACCTAACCAATTCAA 58.859 43.478 0.00 0.00 0.00 2.69
690 691 4.766891 CACTGTCCACCTAACCAATTCAAT 59.233 41.667 0.00 0.00 0.00 2.57
691 692 5.010282 ACTGTCCACCTAACCAATTCAATC 58.990 41.667 0.00 0.00 0.00 2.67
692 693 4.991776 TGTCCACCTAACCAATTCAATCA 58.008 39.130 0.00 0.00 0.00 2.57
693 694 4.764823 TGTCCACCTAACCAATTCAATCAC 59.235 41.667 0.00 0.00 0.00 3.06
694 695 4.764823 GTCCACCTAACCAATTCAATCACA 59.235 41.667 0.00 0.00 0.00 3.58
695 696 5.009631 TCCACCTAACCAATTCAATCACAG 58.990 41.667 0.00 0.00 0.00 3.66
696 697 4.158394 CCACCTAACCAATTCAATCACAGG 59.842 45.833 0.00 0.00 0.00 4.00
697 698 4.766891 CACCTAACCAATTCAATCACAGGT 59.233 41.667 0.00 0.00 34.24 4.00
698 699 5.243730 CACCTAACCAATTCAATCACAGGTT 59.756 40.000 0.00 0.00 41.74 3.50
699 700 5.243730 ACCTAACCAATTCAATCACAGGTTG 59.756 40.000 0.00 0.00 39.49 3.77
700 701 5.476599 CCTAACCAATTCAATCACAGGTTGA 59.523 40.000 0.00 0.00 39.49 3.18
701 702 5.458041 AACCAATTCAATCACAGGTTGAG 57.542 39.130 0.00 0.00 37.77 3.02
702 703 4.473444 ACCAATTCAATCACAGGTTGAGT 58.527 39.130 0.00 0.00 37.77 3.41
703 704 5.630121 ACCAATTCAATCACAGGTTGAGTA 58.370 37.500 0.00 0.00 37.77 2.59
704 705 6.068010 ACCAATTCAATCACAGGTTGAGTAA 58.932 36.000 0.00 0.00 37.77 2.24
705 706 6.721208 ACCAATTCAATCACAGGTTGAGTAAT 59.279 34.615 0.00 0.00 37.77 1.89
706 707 7.233348 ACCAATTCAATCACAGGTTGAGTAATT 59.767 33.333 0.00 0.00 37.77 1.40
707 708 7.756722 CCAATTCAATCACAGGTTGAGTAATTC 59.243 37.037 0.00 0.00 37.77 2.17
708 709 6.480524 TTCAATCACAGGTTGAGTAATTCG 57.519 37.500 0.00 0.00 37.77 3.34
709 710 4.935205 TCAATCACAGGTTGAGTAATTCGG 59.065 41.667 0.00 0.00 37.77 4.30
710 711 4.819105 ATCACAGGTTGAGTAATTCGGA 57.181 40.909 0.00 0.00 37.77 4.55
711 712 4.610605 TCACAGGTTGAGTAATTCGGAA 57.389 40.909 0.00 0.00 0.00 4.30
712 713 4.312443 TCACAGGTTGAGTAATTCGGAAC 58.688 43.478 0.00 0.00 0.00 3.62
734 735 5.010933 ACGGAGGGAGTAGATACATACATG 58.989 45.833 0.00 0.00 0.00 3.21
737 738 3.764434 AGGGAGTAGATACATACATGCGG 59.236 47.826 0.00 0.00 0.00 5.69
739 740 4.219944 GGGAGTAGATACATACATGCGGAA 59.780 45.833 0.00 0.00 0.00 4.30
762 768 6.420913 AGTAATATTACTTGTGGCTCGGAT 57.579 37.500 20.27 0.00 40.96 4.18
767 773 0.107508 ACTTGTGGCTCGGATGGATG 60.108 55.000 0.00 0.00 0.00 3.51
777 783 4.067896 GCTCGGATGGATGTATGTTTCAT 58.932 43.478 0.00 0.00 0.00 2.57
785 791 7.065085 GGATGGATGTATGTTTCATCGGAATAG 59.935 40.741 0.00 0.00 41.54 1.73
797 804 6.516739 TCATCGGAATAGGTCAGATACATC 57.483 41.667 0.00 0.00 38.91 3.06
799 806 4.098055 CGGAATAGGTCAGATACATCCG 57.902 50.000 0.00 0.00 42.01 4.18
841 849 7.914427 ATTTAAATCCCCTTTCCATAGTTCC 57.086 36.000 0.00 0.00 0.00 3.62
945 963 1.121407 CACCACCAGACCAGACCAGA 61.121 60.000 0.00 0.00 0.00 3.86
946 964 1.122019 ACCACCAGACCAGACCAGAC 61.122 60.000 0.00 0.00 0.00 3.51
947 965 1.290324 CACCAGACCAGACCAGACG 59.710 63.158 0.00 0.00 0.00 4.18
948 966 1.153061 ACCAGACCAGACCAGACGA 59.847 57.895 0.00 0.00 0.00 4.20
949 967 0.896019 ACCAGACCAGACCAGACGAG 60.896 60.000 0.00 0.00 0.00 4.18
1022 1040 4.475135 GCCGCCCAACTCCTCCTC 62.475 72.222 0.00 0.00 0.00 3.71
1024 1042 3.787001 CGCCCAACTCCTCCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
1025 1043 2.285743 GCCCAACTCCTCCTCCCT 60.286 66.667 0.00 0.00 0.00 4.20
1026 1044 1.003051 GCCCAACTCCTCCTCCCTA 59.997 63.158 0.00 0.00 0.00 3.53
1062 1080 4.817909 ATGTCCGACCCCTCCCCC 62.818 72.222 0.00 0.00 0.00 5.40
1413 1431 2.579738 GCCCTTCTCTCGACACCC 59.420 66.667 0.00 0.00 0.00 4.61
1428 1446 1.228154 ACCCGCTGGTTTTGACTCC 60.228 57.895 0.00 0.00 44.75 3.85
1436 1454 3.118775 GCTGGTTTTGACTCCTGGTTTTT 60.119 43.478 0.00 0.00 0.00 1.94
1437 1455 4.098807 GCTGGTTTTGACTCCTGGTTTTTA 59.901 41.667 0.00 0.00 0.00 1.52
1438 1456 5.221441 GCTGGTTTTGACTCCTGGTTTTTAT 60.221 40.000 0.00 0.00 0.00 1.40
1439 1457 6.155475 TGGTTTTGACTCCTGGTTTTTATG 57.845 37.500 0.00 0.00 0.00 1.90
1440 1458 4.988540 GGTTTTGACTCCTGGTTTTTATGC 59.011 41.667 0.00 0.00 0.00 3.14
1441 1459 5.221441 GGTTTTGACTCCTGGTTTTTATGCT 60.221 40.000 0.00 0.00 0.00 3.79
1451 1469 8.189119 TCCTGGTTTTTATGCTTTTTACTGAT 57.811 30.769 0.00 0.00 0.00 2.90
1567 1585 8.162878 AGCTTAAATTGGTATCTCATGTGATG 57.837 34.615 18.31 1.38 0.00 3.07
1678 1696 5.721232 ACTTAAGTAGCGAGTTTATGCTGT 58.279 37.500 6.26 0.00 42.46 4.40
1700 1718 6.455646 CTGTGGCAGAAATACGAAAGTGATAC 60.456 42.308 0.00 0.00 38.25 2.24
1701 1719 8.739464 CTGTGGCAGAAATACGAAAGTGATACA 61.739 40.741 0.00 0.00 38.25 2.29
1803 1821 6.256757 GTGAGGAAAGGAATCGTTTCTCATAG 59.743 42.308 22.43 0.00 38.03 2.23
1872 1890 2.436173 AGGCTAGCCCTGATACAACTTC 59.564 50.000 30.42 0.00 44.28 3.01
1933 1951 0.251033 GAACCCACACCAACCCTACC 60.251 60.000 0.00 0.00 0.00 3.18
1948 1966 0.537143 CTACCTTGCCAGTTGCCACA 60.537 55.000 0.00 0.00 40.16 4.17
1952 1970 0.461135 CTTGCCAGTTGCCACAGTTT 59.539 50.000 0.00 0.00 40.16 2.66
1953 1971 0.175302 TTGCCAGTTGCCACAGTTTG 59.825 50.000 0.00 0.00 40.16 2.93
1958 1976 1.067516 CAGTTGCCACAGTTTGAAGGG 59.932 52.381 0.00 0.00 0.00 3.95
1960 1978 2.644992 GCCACAGTTTGAAGGGCG 59.355 61.111 0.00 0.00 34.56 6.13
2046 2064 1.016627 TGCAAGTGACTTGTGCAGAC 58.983 50.000 24.51 8.97 43.09 3.51
2052 2070 3.544684 AGTGACTTGTGCAGACAATGAA 58.455 40.909 0.00 0.00 41.33 2.57
2065 2083 7.119846 GTGCAGACAATGAACCTCTAATTAAGT 59.880 37.037 0.00 0.00 30.08 2.24
2150 2168 2.024176 TCTTATGCTGCCCTTCGAAC 57.976 50.000 0.00 0.00 0.00 3.95
2202 2220 1.666189 GCATTCCGCTTCTTACCTGAC 59.334 52.381 0.00 0.00 37.77 3.51
2245 2263 4.216902 CACTGCAGGTTTGATTCTTGATGA 59.783 41.667 19.93 0.00 0.00 2.92
2250 2268 6.489700 TGCAGGTTTGATTCTTGATGAAACTA 59.510 34.615 0.00 0.00 40.40 2.24
2322 2341 3.559384 CCCCACCCTTTTCTGTCTCTTAC 60.559 52.174 0.00 0.00 0.00 2.34
2323 2342 3.072476 CCCACCCTTTTCTGTCTCTTACA 59.928 47.826 0.00 0.00 36.42 2.41
2394 2413 6.567701 GCAGTAATGCAGCAAGTACAAGTTAA 60.568 38.462 10.86 0.00 34.41 2.01
2422 2441 2.553028 CCACTGGACTGCCATTTGTACT 60.553 50.000 0.00 0.00 44.91 2.73
2496 2515 1.754234 GGGGTAGCATGTTGCCCAG 60.754 63.158 31.33 0.00 46.52 4.45
2528 2547 7.911205 CGTTATTTGTCACCACTCAAAGTTTTA 59.089 33.333 0.00 0.00 37.06 1.52
2575 2594 4.219944 CAGGCGTATAAGGGTTAGATAGCA 59.780 45.833 0.00 0.00 0.00 3.49
2764 2783 8.814235 GCACATGAATTAATTTTTGGAGATCTG 58.186 33.333 0.00 0.00 0.00 2.90
2771 2790 8.593945 ATTAATTTTTGGAGATCTGCCACTTA 57.406 30.769 12.15 6.31 34.56 2.24
2780 2799 4.693420 AGATCTGCCACTTAGCCCTATAT 58.307 43.478 0.00 0.00 0.00 0.86
2791 2810 5.372661 ACTTAGCCCTATATGGTTGGAACAT 59.627 40.000 0.00 0.00 39.30 2.71
2804 2823 2.229792 TGGAACATCACCTGACTTTGC 58.770 47.619 0.00 0.00 0.00 3.68
2837 2856 8.673711 GGTGTTATTTTCAATGTAGTCTATGCA 58.326 33.333 0.00 0.00 0.00 3.96
2847 2866 9.066892 TCAATGTAGTCTATGCAAATATTTCCC 57.933 33.333 0.00 0.00 0.00 3.97
2848 2867 9.071276 CAATGTAGTCTATGCAAATATTTCCCT 57.929 33.333 0.00 0.00 0.00 4.20
2879 2899 4.163427 TGGGCTGGATTGGTTCAAATAAA 58.837 39.130 0.00 0.00 0.00 1.40
2880 2900 4.594920 TGGGCTGGATTGGTTCAAATAAAA 59.405 37.500 0.00 0.00 0.00 1.52
2884 2904 6.536224 GGCTGGATTGGTTCAAATAAAATGAG 59.464 38.462 0.00 0.00 0.00 2.90
2885 2905 6.036408 GCTGGATTGGTTCAAATAAAATGAGC 59.964 38.462 0.00 0.00 0.00 4.26
2886 2906 7.002250 TGGATTGGTTCAAATAAAATGAGCA 57.998 32.000 0.00 0.00 30.54 4.26
2889 2909 7.983484 GGATTGGTTCAAATAAAATGAGCATCT 59.017 33.333 0.00 0.00 34.92 2.90
2893 2913 9.859427 TGGTTCAAATAAAATGAGCATCTAAAG 57.141 29.630 0.00 0.00 34.92 1.85
3018 3045 7.961827 GTCTTCTGCATCTAATATAAGCAATGC 59.038 37.037 0.00 0.00 39.85 3.56
3025 3052 8.127327 GCATCTAATATAAGCAATGCGAATGAT 58.873 33.333 0.00 0.00 31.33 2.45
3026 3053 9.999009 CATCTAATATAAGCAATGCGAATGATT 57.001 29.630 0.00 0.51 0.00 2.57
3094 3121 5.705609 TGAAATCTGGCTTAACTGGTTTC 57.294 39.130 0.00 0.00 38.86 2.78
3245 3275 7.860373 GTGTTAAGTTCAGTTACATGCATTTCA 59.140 33.333 0.00 0.00 0.00 2.69
3263 3293 2.104170 TCAAACCAGGGTTCCACAAAC 58.896 47.619 3.82 0.00 37.35 2.93
3321 3351 9.498176 TCTAAAACTCTCTTGTTAATTACCACC 57.502 33.333 0.00 0.00 0.00 4.61
3332 3362 2.163810 ATTACCACCAGCATGCCAAT 57.836 45.000 15.66 0.00 31.97 3.16
3333 3363 1.184431 TTACCACCAGCATGCCAATG 58.816 50.000 15.66 9.86 36.82 2.82
3395 3429 7.978925 AGACTCCCCACCTGAATATATTTTAG 58.021 38.462 0.00 2.09 0.00 1.85
3401 3435 8.860088 CCCCACCTGAATATATTTTAGGAAAAG 58.140 37.037 25.03 15.66 33.22 2.27
3425 3460 7.002276 AGTTAAGCAACATGTTTAGGTAAGGT 58.998 34.615 8.77 0.00 37.10 3.50
3429 3464 5.001232 GCAACATGTTTAGGTAAGGTGAGA 58.999 41.667 8.77 0.00 0.00 3.27
3466 3501 3.818773 CTCCACAGACCAACGGTAAAATT 59.181 43.478 0.00 0.00 35.25 1.82
3505 3540 5.126707 CCCCAAGATCAGGAATTCAGAAAAG 59.873 44.000 7.93 0.00 0.00 2.27
3589 3626 5.683876 ACTATACCTCTGCAGTTGACAAT 57.316 39.130 14.67 4.20 0.00 2.71
3634 3671 5.863965 TGATCAATAACGGCAATGGATCTA 58.136 37.500 0.00 0.00 35.58 1.98
3642 3679 5.420725 ACGGCAATGGATCTATTAGCATA 57.579 39.130 19.73 0.00 0.00 3.14
3667 3704 6.744112 TGGACTGGTTGATTTGTTGATTAAC 58.256 36.000 0.00 0.00 37.32 2.01
3669 3706 6.640907 GGACTGGTTGATTTGTTGATTAACAC 59.359 38.462 1.97 0.00 45.91 3.32
3721 3765 2.542178 CCGATCCGAATTAATTGACGCA 59.458 45.455 5.17 0.00 0.00 5.24
3724 3768 2.627945 TCCGAATTAATTGACGCAGCT 58.372 42.857 5.17 0.00 0.00 4.24
3738 3782 5.041287 TGACGCAGCTTCTATACAATGTAC 58.959 41.667 0.00 0.00 0.00 2.90
3739 3783 5.006153 ACGCAGCTTCTATACAATGTACA 57.994 39.130 0.00 0.00 0.00 2.90
3740 3784 5.416083 ACGCAGCTTCTATACAATGTACAA 58.584 37.500 0.00 0.00 0.00 2.41
3741 3785 6.049149 ACGCAGCTTCTATACAATGTACAAT 58.951 36.000 0.00 0.00 0.00 2.71
3742 3786 6.018751 ACGCAGCTTCTATACAATGTACAATG 60.019 38.462 9.42 9.42 0.00 2.82
3743 3787 6.564686 CGCAGCTTCTATACAATGTACAATGG 60.565 42.308 15.20 3.31 0.00 3.16
3744 3788 6.483307 GCAGCTTCTATACAATGTACAATGGA 59.517 38.462 15.20 7.11 0.00 3.41
3745 3789 7.519008 GCAGCTTCTATACAATGTACAATGGAC 60.519 40.741 15.20 0.00 0.00 4.02
3746 3790 7.495606 CAGCTTCTATACAATGTACAATGGACA 59.504 37.037 15.20 0.00 0.00 4.02
3747 3791 8.213679 AGCTTCTATACAATGTACAATGGACAT 58.786 33.333 15.20 5.04 39.22 3.06
3748 3792 8.840321 GCTTCTATACAATGTACAATGGACATT 58.160 33.333 17.53 17.53 46.07 2.71
3766 3810 1.037493 TTGTATAGAGGCCGCGTCAT 58.963 50.000 15.10 8.91 0.00 3.06
3889 4009 2.742053 TCTTAAATTGTCGGTGCTCAGC 59.258 45.455 0.00 0.00 0.00 4.26
3900 4020 0.040067 GTGCTCAGCCAAAACCGAAG 60.040 55.000 0.00 0.00 0.00 3.79
3901 4021 0.179032 TGCTCAGCCAAAACCGAAGA 60.179 50.000 0.00 0.00 0.00 2.87
3902 4022 1.168714 GCTCAGCCAAAACCGAAGAT 58.831 50.000 0.00 0.00 0.00 2.40
3948 4071 7.329226 GTGCATATTTGTTTGTTAGCAAGACAT 59.671 33.333 0.00 0.24 35.82 3.06
3950 4073 7.541783 GCATATTTGTTTGTTAGCAAGACATCA 59.458 33.333 7.67 1.57 35.82 3.07
3951 4074 8.853345 CATATTTGTTTGTTAGCAAGACATCAC 58.147 33.333 7.67 0.00 35.82 3.06
3952 4075 4.829064 TGTTTGTTAGCAAGACATCACC 57.171 40.909 0.00 0.00 35.82 4.02
3953 4076 4.460263 TGTTTGTTAGCAAGACATCACCT 58.540 39.130 0.00 0.00 35.82 4.00
3954 4077 4.887071 TGTTTGTTAGCAAGACATCACCTT 59.113 37.500 0.00 0.00 35.82 3.50
4064 4187 5.314923 ACAACATACATTGGATGAACTGC 57.685 39.130 15.90 0.00 33.63 4.40
4118 4241 3.515104 TGTGCAGTCAGATCTATTGGTCA 59.485 43.478 0.00 0.00 0.00 4.02
4216 4339 5.482878 CCTTACCCAGTCTGGTTAAGTCTTA 59.517 44.000 26.12 0.48 39.91 2.10
4366 4489 2.165998 GCTCTCATGAAAACTTGGCCT 58.834 47.619 3.32 0.00 0.00 5.19
4457 4580 4.100189 ACATAAGATACACTCAGGACTGCC 59.900 45.833 0.00 0.00 0.00 4.85
4626 4749 2.271800 GTGATAGCACGGAGTTTGAGG 58.728 52.381 0.00 0.00 41.61 3.86
4627 4750 1.291132 GATAGCACGGAGTTTGAGGC 58.709 55.000 0.00 0.00 41.61 4.70
4707 4830 2.873288 CCGCTGCCTGAGCTTTTC 59.127 61.111 0.00 0.00 46.64 2.29
4989 5120 1.966762 CTGTGCCATGGTTGGGTTC 59.033 57.895 14.67 0.00 43.84 3.62
5037 5168 1.801178 GGTTCTCTTTGTCCTCTTGCG 59.199 52.381 0.00 0.00 0.00 4.85
5141 5272 0.897863 TTTTCATTGTGGAGGGGCGG 60.898 55.000 0.00 0.00 0.00 6.13
5142 5273 2.075355 TTTCATTGTGGAGGGGCGGT 62.075 55.000 0.00 0.00 0.00 5.68
5143 5274 2.751436 CATTGTGGAGGGGCGGTG 60.751 66.667 0.00 0.00 0.00 4.94
5516 5647 7.237255 AGAGGTCTTCATGGAAAGAAAAGAAT 58.763 34.615 0.00 0.00 37.04 2.40
5518 5649 9.183368 GAGGTCTTCATGGAAAGAAAAGAATAT 57.817 33.333 0.00 0.00 37.04 1.28
5528 5659 9.258629 TGGAAAGAAAAGAATATGATGGTTGAT 57.741 29.630 0.00 0.00 0.00 2.57
5529 5660 9.741647 GGAAAGAAAAGAATATGATGGTTGATC 57.258 33.333 0.00 0.00 0.00 2.92
5562 5693 6.097270 AGCATAAATGACACAAATGCCATAGT 59.903 34.615 11.92 0.00 43.06 2.12
5566 5697 4.764679 TGACACAAATGCCATAGTTCAC 57.235 40.909 0.00 0.00 0.00 3.18
5569 5700 5.068329 TGACACAAATGCCATAGTTCACAAA 59.932 36.000 0.00 0.00 0.00 2.83
5574 5705 8.986847 CACAAATGCCATAGTTCACAAATTTTA 58.013 29.630 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 8.467963 TGTATGGAATAAAATGCTCATCACAT 57.532 30.769 0.00 0.00 0.00 3.21
67 68 9.571816 TGTATGTATGGAATAAAATGCTCATCA 57.428 29.630 0.00 0.00 0.00 3.07
72 73 8.518430 TGTGTGTATGTATGGAATAAAATGCT 57.482 30.769 0.00 0.00 0.00 3.79
128 129 8.923270 AGGATGTTAGAAAATCAGTTCCAAAAA 58.077 29.630 0.00 0.00 0.00 1.94
129 130 8.477419 AGGATGTTAGAAAATCAGTTCCAAAA 57.523 30.769 0.00 0.00 0.00 2.44
130 131 8.477419 AAGGATGTTAGAAAATCAGTTCCAAA 57.523 30.769 0.00 0.00 0.00 3.28
131 132 9.581289 TTAAGGATGTTAGAAAATCAGTTCCAA 57.419 29.630 0.00 0.00 0.00 3.53
132 133 9.753674 ATTAAGGATGTTAGAAAATCAGTTCCA 57.246 29.630 0.00 0.00 0.00 3.53
163 164 3.204467 TTTTGGGGCGGAGGGAGTG 62.204 63.158 0.00 0.00 0.00 3.51
231 232 5.810080 ACACCCATATCTTACCTCTTAGC 57.190 43.478 0.00 0.00 0.00 3.09
233 234 9.670442 ATCTAAACACCCATATCTTACCTCTTA 57.330 33.333 0.00 0.00 0.00 2.10
247 248 5.152934 GGAGGGAGTATATCTAAACACCCA 58.847 45.833 10.42 0.00 45.84 4.51
249 250 6.070710 GGATGGAGGGAGTATATCTAAACACC 60.071 46.154 0.00 0.00 0.00 4.16
254 255 6.736561 TCTGGATGGAGGGAGTATATCTAA 57.263 41.667 0.00 0.00 0.00 2.10
263 264 5.699143 ACAAATATTTCTGGATGGAGGGAG 58.301 41.667 0.00 0.00 0.00 4.30
264 265 5.193527 TGACAAATATTTCTGGATGGAGGGA 59.806 40.000 0.00 0.00 0.00 4.20
266 267 6.774170 TGATGACAAATATTTCTGGATGGAGG 59.226 38.462 0.00 0.00 0.00 4.30
267 268 7.812690 TGATGACAAATATTTCTGGATGGAG 57.187 36.000 0.00 0.00 0.00 3.86
269 270 9.826574 ATTTTGATGACAAATATTTCTGGATGG 57.173 29.630 0.00 0.00 43.99 3.51
271 272 9.826574 CCATTTTGATGACAAATATTTCTGGAT 57.173 29.630 0.00 0.00 43.99 3.41
272 273 9.033711 TCCATTTTGATGACAAATATTTCTGGA 57.966 29.630 0.00 0.00 43.99 3.86
273 274 9.826574 ATCCATTTTGATGACAAATATTTCTGG 57.173 29.630 0.00 0.00 43.99 3.86
281 282 9.880157 CTCCTTTTATCCATTTTGATGACAAAT 57.120 29.630 0.00 0.00 43.99 2.32
282 283 9.087871 TCTCCTTTTATCCATTTTGATGACAAA 57.912 29.630 0.00 0.00 43.10 2.83
283 284 8.648698 TCTCCTTTTATCCATTTTGATGACAA 57.351 30.769 0.00 0.00 0.00 3.18
284 285 8.689061 CATCTCCTTTTATCCATTTTGATGACA 58.311 33.333 0.00 0.00 32.05 3.58
285 286 8.689972 ACATCTCCTTTTATCCATTTTGATGAC 58.310 33.333 0.00 0.00 33.85 3.06
286 287 8.827832 ACATCTCCTTTTATCCATTTTGATGA 57.172 30.769 0.00 0.00 33.85 2.92
289 290 9.056005 CGATACATCTCCTTTTATCCATTTTGA 57.944 33.333 0.00 0.00 0.00 2.69
290 291 9.056005 TCGATACATCTCCTTTTATCCATTTTG 57.944 33.333 0.00 0.00 0.00 2.44
291 292 9.277783 CTCGATACATCTCCTTTTATCCATTTT 57.722 33.333 0.00 0.00 0.00 1.82
292 293 8.651389 TCTCGATACATCTCCTTTTATCCATTT 58.349 33.333 0.00 0.00 0.00 2.32
293 294 8.195165 TCTCGATACATCTCCTTTTATCCATT 57.805 34.615 0.00 0.00 0.00 3.16
294 295 7.782897 TCTCGATACATCTCCTTTTATCCAT 57.217 36.000 0.00 0.00 0.00 3.41
295 296 7.233553 ACATCTCGATACATCTCCTTTTATCCA 59.766 37.037 0.00 0.00 0.00 3.41
296 297 7.607250 ACATCTCGATACATCTCCTTTTATCC 58.393 38.462 0.00 0.00 0.00 2.59
297 298 9.482627 AAACATCTCGATACATCTCCTTTTATC 57.517 33.333 0.00 0.00 0.00 1.75
300 301 9.838339 AATAAACATCTCGATACATCTCCTTTT 57.162 29.630 0.00 0.00 0.00 2.27
302 303 9.915629 GTAATAAACATCTCGATACATCTCCTT 57.084 33.333 0.00 0.00 0.00 3.36
303 304 9.303116 AGTAATAAACATCTCGATACATCTCCT 57.697 33.333 0.00 0.00 0.00 3.69
304 305 9.562583 GAGTAATAAACATCTCGATACATCTCC 57.437 37.037 0.00 0.00 0.00 3.71
305 306 9.562583 GGAGTAATAAACATCTCGATACATCTC 57.437 37.037 0.00 0.00 0.00 2.75
306 307 8.524487 GGGAGTAATAAACATCTCGATACATCT 58.476 37.037 0.00 0.00 0.00 2.90
307 308 8.524487 AGGGAGTAATAAACATCTCGATACATC 58.476 37.037 0.00 0.00 0.00 3.06
308 309 8.423906 AGGGAGTAATAAACATCTCGATACAT 57.576 34.615 0.00 0.00 0.00 2.29
309 310 7.039923 GGAGGGAGTAATAAACATCTCGATACA 60.040 40.741 0.00 0.00 0.00 2.29
310 311 7.039923 TGGAGGGAGTAATAAACATCTCGATAC 60.040 40.741 0.00 0.00 0.00 2.24
311 312 7.008332 TGGAGGGAGTAATAAACATCTCGATA 58.992 38.462 0.00 0.00 0.00 2.92
312 313 5.839063 TGGAGGGAGTAATAAACATCTCGAT 59.161 40.000 0.00 0.00 0.00 3.59
313 314 5.205821 TGGAGGGAGTAATAAACATCTCGA 58.794 41.667 0.00 0.00 0.00 4.04
314 315 5.531122 TGGAGGGAGTAATAAACATCTCG 57.469 43.478 0.00 0.00 0.00 4.04
315 316 7.740805 AGAATGGAGGGAGTAATAAACATCTC 58.259 38.462 0.00 0.00 0.00 2.75
316 317 7.698163 AGAATGGAGGGAGTAATAAACATCT 57.302 36.000 0.00 0.00 0.00 2.90
317 318 9.847224 TTTAGAATGGAGGGAGTAATAAACATC 57.153 33.333 0.00 0.00 0.00 3.06
324 325 8.368668 CGAGTAATTTAGAATGGAGGGAGTAAT 58.631 37.037 0.00 0.00 0.00 1.89
325 326 7.343833 ACGAGTAATTTAGAATGGAGGGAGTAA 59.656 37.037 0.00 0.00 0.00 2.24
326 327 6.837568 ACGAGTAATTTAGAATGGAGGGAGTA 59.162 38.462 0.00 0.00 0.00 2.59
327 328 5.661759 ACGAGTAATTTAGAATGGAGGGAGT 59.338 40.000 0.00 0.00 0.00 3.85
328 329 6.163135 ACGAGTAATTTAGAATGGAGGGAG 57.837 41.667 0.00 0.00 0.00 4.30
329 330 5.221185 CGACGAGTAATTTAGAATGGAGGGA 60.221 44.000 0.00 0.00 0.00 4.20
330 331 4.982916 CGACGAGTAATTTAGAATGGAGGG 59.017 45.833 0.00 0.00 0.00 4.30
331 332 4.444720 GCGACGAGTAATTTAGAATGGAGG 59.555 45.833 0.00 0.00 0.00 4.30
332 333 5.041287 TGCGACGAGTAATTTAGAATGGAG 58.959 41.667 0.00 0.00 0.00 3.86
333 334 5.001237 TGCGACGAGTAATTTAGAATGGA 57.999 39.130 0.00 0.00 0.00 3.41
334 335 5.041287 TCTGCGACGAGTAATTTAGAATGG 58.959 41.667 0.00 0.00 0.00 3.16
335 336 6.569228 TTCTGCGACGAGTAATTTAGAATG 57.431 37.500 0.00 0.00 0.00 2.67
336 337 7.254455 CCATTTCTGCGACGAGTAATTTAGAAT 60.254 37.037 0.00 0.00 0.00 2.40
337 338 6.035650 CCATTTCTGCGACGAGTAATTTAGAA 59.964 38.462 0.00 0.00 0.00 2.10
338 339 5.518847 CCATTTCTGCGACGAGTAATTTAGA 59.481 40.000 0.00 0.00 0.00 2.10
339 340 5.518847 TCCATTTCTGCGACGAGTAATTTAG 59.481 40.000 0.00 0.00 0.00 1.85
340 341 5.412640 TCCATTTCTGCGACGAGTAATTTA 58.587 37.500 0.00 0.00 0.00 1.40
341 342 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
342 343 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
343 344 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
344 345 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
345 346 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
346 347 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
347 348 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
348 349 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
349 350 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
350 351 5.289595 TGTAGATACATCCATTTCTGCGAC 58.710 41.667 0.00 0.00 0.00 5.19
351 352 5.529581 TGTAGATACATCCATTTCTGCGA 57.470 39.130 0.00 0.00 0.00 5.10
352 353 5.050091 GGTTGTAGATACATCCATTTCTGCG 60.050 44.000 13.03 0.00 42.74 5.18
353 354 5.822519 TGGTTGTAGATACATCCATTTCTGC 59.177 40.000 15.62 0.00 45.93 4.26
404 405 6.201226 TGTGTTTGTACTGATGCTCAAAAA 57.799 33.333 0.00 0.00 32.81 1.94
405 406 5.826601 TGTGTTTGTACTGATGCTCAAAA 57.173 34.783 0.00 0.00 32.81 2.44
406 407 5.733091 GCTTGTGTTTGTACTGATGCTCAAA 60.733 40.000 0.00 0.00 0.00 2.69
407 408 4.261155 GCTTGTGTTTGTACTGATGCTCAA 60.261 41.667 0.00 0.00 0.00 3.02
408 409 3.250762 GCTTGTGTTTGTACTGATGCTCA 59.749 43.478 0.00 0.00 0.00 4.26
409 410 3.665323 CGCTTGTGTTTGTACTGATGCTC 60.665 47.826 0.00 0.00 0.00 4.26
410 411 2.224079 CGCTTGTGTTTGTACTGATGCT 59.776 45.455 0.00 0.00 0.00 3.79
411 412 2.574322 CGCTTGTGTTTGTACTGATGC 58.426 47.619 0.00 0.00 0.00 3.91
412 413 2.224079 AGCGCTTGTGTTTGTACTGATG 59.776 45.455 2.64 0.00 0.00 3.07
413 414 2.480419 GAGCGCTTGTGTTTGTACTGAT 59.520 45.455 13.26 0.00 0.00 2.90
414 415 1.864711 GAGCGCTTGTGTTTGTACTGA 59.135 47.619 13.26 0.00 0.00 3.41
415 416 1.597195 TGAGCGCTTGTGTTTGTACTG 59.403 47.619 13.26 0.00 0.00 2.74
416 417 1.948104 TGAGCGCTTGTGTTTGTACT 58.052 45.000 13.26 0.00 0.00 2.73
417 418 2.969443 ATGAGCGCTTGTGTTTGTAC 57.031 45.000 13.26 0.00 0.00 2.90
418 419 5.062934 GTGTATATGAGCGCTTGTGTTTGTA 59.937 40.000 13.26 0.00 0.00 2.41
419 420 4.000325 TGTATATGAGCGCTTGTGTTTGT 59.000 39.130 13.26 0.00 0.00 2.83
420 421 4.334443 GTGTATATGAGCGCTTGTGTTTG 58.666 43.478 13.26 0.00 0.00 2.93
421 422 3.062099 CGTGTATATGAGCGCTTGTGTTT 59.938 43.478 13.26 0.00 0.00 2.83
422 423 2.603110 CGTGTATATGAGCGCTTGTGTT 59.397 45.455 13.26 0.00 0.00 3.32
423 424 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
424 425 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
425 426 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
426 427 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
427 428 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
428 429 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
431 432 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
432 433 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
433 434 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
434 435 3.305110 TGAGTGTATGCGCGTGTATATG 58.695 45.455 13.61 0.00 0.00 1.78
435 436 3.636282 TGAGTGTATGCGCGTGTATAT 57.364 42.857 13.61 0.00 0.00 0.86
436 437 3.561503 GATGAGTGTATGCGCGTGTATA 58.438 45.455 13.61 2.40 0.00 1.47
437 438 2.394708 GATGAGTGTATGCGCGTGTAT 58.605 47.619 13.61 4.63 0.00 2.29
438 439 1.535226 GGATGAGTGTATGCGCGTGTA 60.535 52.381 13.61 0.00 0.00 2.90
439 440 0.806102 GGATGAGTGTATGCGCGTGT 60.806 55.000 13.61 0.00 0.00 4.49
440 441 1.490693 GGGATGAGTGTATGCGCGTG 61.491 60.000 13.61 0.00 0.00 5.34
441 442 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
442 443 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
443 444 2.029020 TCATAGGGATGAGTGTATGCGC 60.029 50.000 0.00 0.00 37.15 6.09
444 445 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
445 446 3.990469 CGTTCATAGGGATGAGTGTATGC 59.010 47.826 0.00 0.00 43.03 3.14
446 447 3.990469 GCGTTCATAGGGATGAGTGTATG 59.010 47.826 0.00 0.00 43.03 2.39
447 448 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
448 449 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
449 450 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
450 451 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
451 452 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
452 453 2.602257 TGTGCGTTCATAGGGATGAG 57.398 50.000 0.00 0.00 43.03 2.90
453 454 3.552068 CGTATGTGCGTTCATAGGGATGA 60.552 47.826 11.13 0.00 40.45 2.92
454 455 2.731451 CGTATGTGCGTTCATAGGGATG 59.269 50.000 11.13 0.00 34.54 3.51
455 456 2.866460 GCGTATGTGCGTTCATAGGGAT 60.866 50.000 16.69 0.00 36.95 3.85
456 457 1.537348 GCGTATGTGCGTTCATAGGGA 60.537 52.381 16.69 0.00 36.95 4.20
457 458 0.859232 GCGTATGTGCGTTCATAGGG 59.141 55.000 16.69 8.49 36.95 3.53
458 459 1.257936 GTGCGTATGTGCGTTCATAGG 59.742 52.381 13.25 13.25 38.44 2.57
459 460 1.923864 TGTGCGTATGTGCGTTCATAG 59.076 47.619 2.83 0.73 37.81 2.23
460 461 1.656594 GTGTGCGTATGTGCGTTCATA 59.343 47.619 0.00 0.00 37.81 2.15
461 462 0.442310 GTGTGCGTATGTGCGTTCAT 59.558 50.000 0.00 0.87 37.81 2.57
462 463 1.561717 GGTGTGCGTATGTGCGTTCA 61.562 55.000 0.00 0.00 37.81 3.18
463 464 1.131826 GGTGTGCGTATGTGCGTTC 59.868 57.895 0.00 0.00 37.81 3.95
464 465 2.322081 GGGTGTGCGTATGTGCGTT 61.322 57.895 0.00 0.00 37.81 4.84
465 466 1.879737 TAGGGTGTGCGTATGTGCGT 61.880 55.000 0.00 0.00 37.81 5.24
466 467 1.153726 TAGGGTGTGCGTATGTGCG 60.154 57.895 0.00 0.00 37.81 5.34
467 468 1.087771 GGTAGGGTGTGCGTATGTGC 61.088 60.000 0.00 0.00 0.00 4.57
468 469 0.461339 GGGTAGGGTGTGCGTATGTG 60.461 60.000 0.00 0.00 0.00 3.21
469 470 1.619807 GGGGTAGGGTGTGCGTATGT 61.620 60.000 0.00 0.00 0.00 2.29
470 471 1.145377 GGGGTAGGGTGTGCGTATG 59.855 63.158 0.00 0.00 0.00 2.39
471 472 0.262580 TAGGGGTAGGGTGTGCGTAT 59.737 55.000 0.00 0.00 0.00 3.06
472 473 0.262580 ATAGGGGTAGGGTGTGCGTA 59.737 55.000 0.00 0.00 0.00 4.42
473 474 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
474 475 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
475 476 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
476 477 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
477 478 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
478 479 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
479 480 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
480 481 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
481 482 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
482 483 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
483 484 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
484 485 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
485 486 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
486 487 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
487 488 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
488 489 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
489 490 1.681538 GTCTCTCGGAGGTGCTCATA 58.318 55.000 4.96 0.00 31.08 2.15
490 491 1.040339 GGTCTCTCGGAGGTGCTCAT 61.040 60.000 4.96 0.00 31.08 2.90
491 492 1.679305 GGTCTCTCGGAGGTGCTCA 60.679 63.158 4.96 0.00 31.08 4.26
492 493 2.766400 CGGTCTCTCGGAGGTGCTC 61.766 68.421 4.96 0.00 0.00 4.26
493 494 2.752238 CGGTCTCTCGGAGGTGCT 60.752 66.667 4.96 0.00 0.00 4.40
494 495 2.750637 TCGGTCTCTCGGAGGTGC 60.751 66.667 4.96 0.00 0.00 5.01
495 496 2.766400 GCTCGGTCTCTCGGAGGTG 61.766 68.421 4.96 0.00 41.72 4.00
496 497 2.438795 GCTCGGTCTCTCGGAGGT 60.439 66.667 4.96 0.00 41.72 3.85
497 498 3.213402 GGCTCGGTCTCTCGGAGG 61.213 72.222 4.96 0.00 41.72 4.30
498 499 3.578272 CGGCTCGGTCTCTCGGAG 61.578 72.222 0.00 0.00 43.45 4.63
509 510 1.073964 CAAGATGATATGCCGGCTCG 58.926 55.000 29.70 0.00 0.00 5.03
510 511 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
511 512 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
512 513 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
513 514 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
514 515 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
515 516 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
516 517 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
517 518 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
518 519 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
519 520 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
520 521 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
521 522 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
522 523 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
523 524 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
524 525 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
525 526 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
526 527 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
527 528 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
528 529 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
529 530 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
530 531 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
531 532 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
532 533 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
533 534 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
534 535 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
535 536 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
536 537 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
537 538 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
540 541 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
542 543 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
545 546 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
555 556 2.162921 GACGTTCCTGTCGACGACGA 62.163 60.000 27.94 11.96 46.56 4.20
556 557 1.791283 GACGTTCCTGTCGACGACG 60.791 63.158 22.06 22.91 41.53 5.12
557 558 0.452452 GAGACGTTCCTGTCGACGAC 60.452 60.000 20.97 20.97 43.70 4.34
558 559 1.572085 GGAGACGTTCCTGTCGACGA 61.572 60.000 11.62 0.00 43.70 4.20
559 560 1.154263 GGAGACGTTCCTGTCGACG 60.154 63.158 11.62 5.76 43.70 5.12
560 561 4.863984 GGAGACGTTCCTGTCGAC 57.136 61.111 9.11 9.11 43.70 4.20
568 569 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
569 570 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
570 571 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
571 572 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
572 573 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
573 574 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
574 575 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
575 576 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
576 577 0.962356 AATGCGCTTTCAGTGGGAGG 60.962 55.000 9.73 0.00 0.00 4.30
577 578 0.169672 CAATGCGCTTTCAGTGGGAG 59.830 55.000 9.73 0.00 0.00 4.30
578 579 1.865788 GCAATGCGCTTTCAGTGGGA 61.866 55.000 9.73 0.00 37.77 4.37
579 580 1.444895 GCAATGCGCTTTCAGTGGG 60.445 57.895 9.73 0.00 37.77 4.61
580 581 1.444895 GGCAATGCGCTTTCAGTGG 60.445 57.895 9.73 0.00 41.91 4.00
581 582 1.798725 CGGCAATGCGCTTTCAGTG 60.799 57.895 9.73 0.00 41.91 3.66
582 583 2.562912 CGGCAATGCGCTTTCAGT 59.437 55.556 9.73 0.00 41.91 3.41
583 584 2.198906 TTCCGGCAATGCGCTTTCAG 62.199 55.000 9.73 0.00 41.91 3.02
584 585 1.800283 TTTCCGGCAATGCGCTTTCA 61.800 50.000 9.73 0.00 41.91 2.69
585 586 0.458370 ATTTCCGGCAATGCGCTTTC 60.458 50.000 9.73 3.08 41.91 2.62
586 587 0.458370 GATTTCCGGCAATGCGCTTT 60.458 50.000 9.73 5.65 41.91 3.51
587 588 1.139520 GATTTCCGGCAATGCGCTT 59.860 52.632 9.73 0.00 41.91 4.68
588 589 2.774799 GGATTTCCGGCAATGCGCT 61.775 57.895 9.73 0.00 41.91 5.92
589 590 2.278792 GGATTTCCGGCAATGCGC 60.279 61.111 3.34 0.00 41.28 6.09
590 591 1.064621 CAGGATTTCCGGCAATGCG 59.935 57.895 12.24 4.57 42.08 4.73
591 592 0.817013 TTCAGGATTTCCGGCAATGC 59.183 50.000 10.26 10.26 42.08 3.56
592 593 3.806625 ATTTCAGGATTTCCGGCAATG 57.193 42.857 3.34 0.00 42.08 2.82
593 594 5.930837 TTTATTTCAGGATTTCCGGCAAT 57.069 34.783 0.00 0.00 42.08 3.56
594 595 5.163457 GGATTTATTTCAGGATTTCCGGCAA 60.163 40.000 0.00 0.00 42.08 4.52
595 596 4.340950 GGATTTATTTCAGGATTTCCGGCA 59.659 41.667 0.00 0.00 42.08 5.69
596 597 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
597 598 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
605 606 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
606 607 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
607 608 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
608 609 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
609 610 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
610 611 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
611 612 5.316167 TGCTCGCATTATTCCTGGATTTAT 58.684 37.500 0.00 0.00 0.00 1.40
612 613 4.713553 TGCTCGCATTATTCCTGGATTTA 58.286 39.130 0.00 0.00 0.00 1.40
613 614 3.554934 TGCTCGCATTATTCCTGGATTT 58.445 40.909 0.00 0.00 0.00 2.17
614 615 3.213206 TGCTCGCATTATTCCTGGATT 57.787 42.857 0.00 0.00 0.00 3.01
615 616 2.936919 TGCTCGCATTATTCCTGGAT 57.063 45.000 0.00 0.00 0.00 3.41
616 617 2.104622 TGATGCTCGCATTATTCCTGGA 59.895 45.455 5.79 0.00 36.70 3.86
617 618 2.483106 CTGATGCTCGCATTATTCCTGG 59.517 50.000 5.79 0.00 36.70 4.45
618 619 2.483106 CCTGATGCTCGCATTATTCCTG 59.517 50.000 5.79 0.00 36.70 3.86
619 620 2.369860 TCCTGATGCTCGCATTATTCCT 59.630 45.455 5.79 0.00 36.70 3.36
620 621 2.771089 TCCTGATGCTCGCATTATTCC 58.229 47.619 5.79 0.00 36.70 3.01
621 622 5.049198 TCAAATCCTGATGCTCGCATTATTC 60.049 40.000 5.79 0.00 36.70 1.75
622 623 4.823442 TCAAATCCTGATGCTCGCATTATT 59.177 37.500 5.79 2.29 36.70 1.40
623 624 4.392047 TCAAATCCTGATGCTCGCATTAT 58.608 39.130 5.79 0.00 36.70 1.28
624 625 3.807553 TCAAATCCTGATGCTCGCATTA 58.192 40.909 5.79 0.89 36.70 1.90
625 626 2.646930 TCAAATCCTGATGCTCGCATT 58.353 42.857 5.79 0.00 36.70 3.56
626 627 2.336945 TCAAATCCTGATGCTCGCAT 57.663 45.000 3.70 3.70 39.69 4.73
627 628 1.739466 GTTCAAATCCTGATGCTCGCA 59.261 47.619 0.00 0.00 32.78 5.10
628 629 1.064654 GGTTCAAATCCTGATGCTCGC 59.935 52.381 0.00 0.00 32.78 5.03
629 630 1.672881 GGGTTCAAATCCTGATGCTCG 59.327 52.381 0.00 0.00 32.78 5.03
630 631 3.010200 AGGGTTCAAATCCTGATGCTC 57.990 47.619 0.00 0.00 38.36 4.26
637 638 2.065799 ACTCACCAGGGTTCAAATCCT 58.934 47.619 0.00 0.00 41.23 3.24
638 639 2.558359 CAACTCACCAGGGTTCAAATCC 59.442 50.000 0.00 0.00 0.00 3.01
639 640 2.558359 CCAACTCACCAGGGTTCAAATC 59.442 50.000 0.00 0.00 0.00 2.17
640 641 2.597455 CCAACTCACCAGGGTTCAAAT 58.403 47.619 0.00 0.00 0.00 2.32
641 642 1.410932 CCCAACTCACCAGGGTTCAAA 60.411 52.381 0.00 0.00 37.81 2.69
642 643 0.184933 CCCAACTCACCAGGGTTCAA 59.815 55.000 0.00 0.00 37.81 2.69
643 644 1.715019 CCCCAACTCACCAGGGTTCA 61.715 60.000 0.00 0.00 41.16 3.18
644 645 1.074951 CCCCAACTCACCAGGGTTC 59.925 63.158 0.00 0.00 41.16 3.62
645 646 0.776080 ATCCCCAACTCACCAGGGTT 60.776 55.000 0.00 0.00 41.16 4.11
646 647 0.120377 TATCCCCAACTCACCAGGGT 59.880 55.000 0.00 0.00 41.16 4.34
647 648 0.546598 GTATCCCCAACTCACCAGGG 59.453 60.000 0.00 0.00 42.44 4.45
648 649 0.546598 GGTATCCCCAACTCACCAGG 59.453 60.000 0.00 0.00 0.00 4.45
649 650 1.285280 TGGTATCCCCAACTCACCAG 58.715 55.000 0.00 0.00 41.50 4.00
650 651 3.503974 TGGTATCCCCAACTCACCA 57.496 52.632 0.00 0.00 41.50 4.17
658 659 0.912487 GGTGGACAGTGGTATCCCCA 60.912 60.000 0.00 0.00 42.51 4.96
659 660 0.620700 AGGTGGACAGTGGTATCCCC 60.621 60.000 0.00 0.00 33.69 4.81
660 661 2.169978 GTTAGGTGGACAGTGGTATCCC 59.830 54.545 0.00 0.00 33.69 3.85
661 662 2.169978 GGTTAGGTGGACAGTGGTATCC 59.830 54.545 0.00 0.00 35.37 2.59
662 663 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
663 664 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
664 665 2.402182 TGGTTAGGTGGACAGTGGTA 57.598 50.000 0.00 0.00 0.00 3.25
665 666 1.513858 TTGGTTAGGTGGACAGTGGT 58.486 50.000 0.00 0.00 0.00 4.16
666 667 2.879103 ATTGGTTAGGTGGACAGTGG 57.121 50.000 0.00 0.00 0.00 4.00
667 668 3.750371 TGAATTGGTTAGGTGGACAGTG 58.250 45.455 0.00 0.00 0.00 3.66
668 669 4.447138 TTGAATTGGTTAGGTGGACAGT 57.553 40.909 0.00 0.00 0.00 3.55
669 670 5.009631 TGATTGAATTGGTTAGGTGGACAG 58.990 41.667 0.00 0.00 0.00 3.51
670 671 4.764823 GTGATTGAATTGGTTAGGTGGACA 59.235 41.667 0.00 0.00 0.00 4.02
671 672 4.764823 TGTGATTGAATTGGTTAGGTGGAC 59.235 41.667 0.00 0.00 0.00 4.02
672 673 4.991776 TGTGATTGAATTGGTTAGGTGGA 58.008 39.130 0.00 0.00 0.00 4.02
673 674 4.158394 CCTGTGATTGAATTGGTTAGGTGG 59.842 45.833 0.00 0.00 0.00 4.61
674 675 4.766891 ACCTGTGATTGAATTGGTTAGGTG 59.233 41.667 0.00 0.00 34.91 4.00
675 676 4.998051 ACCTGTGATTGAATTGGTTAGGT 58.002 39.130 0.00 0.00 0.00 3.08
676 677 5.476599 TCAACCTGTGATTGAATTGGTTAGG 59.523 40.000 0.00 0.00 36.22 2.69
677 678 6.207417 ACTCAACCTGTGATTGAATTGGTTAG 59.793 38.462 0.00 0.00 35.70 2.34
678 679 6.068010 ACTCAACCTGTGATTGAATTGGTTA 58.932 36.000 0.00 0.00 35.70 2.85
679 680 4.895297 ACTCAACCTGTGATTGAATTGGTT 59.105 37.500 0.00 0.00 35.70 3.67
680 681 4.473444 ACTCAACCTGTGATTGAATTGGT 58.527 39.130 0.00 0.00 35.70 3.67
681 682 6.573664 TTACTCAACCTGTGATTGAATTGG 57.426 37.500 0.00 0.00 35.70 3.16
682 683 7.482743 CGAATTACTCAACCTGTGATTGAATTG 59.517 37.037 0.00 0.00 35.70 2.32
683 684 7.362056 CCGAATTACTCAACCTGTGATTGAATT 60.362 37.037 0.00 0.00 35.70 2.17
684 685 6.094048 CCGAATTACTCAACCTGTGATTGAAT 59.906 38.462 0.00 0.00 35.70 2.57
685 686 5.411361 CCGAATTACTCAACCTGTGATTGAA 59.589 40.000 0.00 0.00 35.70 2.69
686 687 4.935205 CCGAATTACTCAACCTGTGATTGA 59.065 41.667 0.00 0.00 35.07 2.57
687 688 4.935205 TCCGAATTACTCAACCTGTGATTG 59.065 41.667 0.00 0.00 35.07 2.67
688 689 5.160607 TCCGAATTACTCAACCTGTGATT 57.839 39.130 0.00 0.00 35.07 2.57
689 690 4.819105 TCCGAATTACTCAACCTGTGAT 57.181 40.909 0.00 0.00 35.07 3.06
690 691 4.312443 GTTCCGAATTACTCAACCTGTGA 58.688 43.478 0.00 0.00 34.17 3.58
691 692 3.122948 CGTTCCGAATTACTCAACCTGTG 59.877 47.826 0.00 0.00 0.00 3.66
692 693 3.323243 CGTTCCGAATTACTCAACCTGT 58.677 45.455 0.00 0.00 0.00 4.00
693 694 2.671396 CCGTTCCGAATTACTCAACCTG 59.329 50.000 0.00 0.00 0.00 4.00
694 695 2.564062 TCCGTTCCGAATTACTCAACCT 59.436 45.455 0.00 0.00 0.00 3.50
695 696 2.928116 CTCCGTTCCGAATTACTCAACC 59.072 50.000 0.00 0.00 0.00 3.77
696 697 2.928116 CCTCCGTTCCGAATTACTCAAC 59.072 50.000 0.00 0.00 0.00 3.18
697 698 2.093869 CCCTCCGTTCCGAATTACTCAA 60.094 50.000 0.00 0.00 0.00 3.02
698 699 1.479323 CCCTCCGTTCCGAATTACTCA 59.521 52.381 0.00 0.00 0.00 3.41
699 700 1.753073 TCCCTCCGTTCCGAATTACTC 59.247 52.381 0.00 0.00 0.00 2.59
700 701 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
701 702 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
702 703 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
703 704 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
704 705 1.064166 TCTACTCCCTCCGTTCCGAAT 60.064 52.381 0.00 0.00 0.00 3.34
705 706 0.329261 TCTACTCCCTCCGTTCCGAA 59.671 55.000 0.00 0.00 0.00 4.30
706 707 0.549950 ATCTACTCCCTCCGTTCCGA 59.450 55.000 0.00 0.00 0.00 4.55
707 708 1.878734 GTATCTACTCCCTCCGTTCCG 59.121 57.143 0.00 0.00 0.00 4.30
708 709 2.941480 TGTATCTACTCCCTCCGTTCC 58.059 52.381 0.00 0.00 0.00 3.62
709 710 5.068636 TGTATGTATCTACTCCCTCCGTTC 58.931 45.833 0.00 0.00 0.00 3.95
710 711 5.057843 TGTATGTATCTACTCCCTCCGTT 57.942 43.478 0.00 0.00 0.00 4.44
711 712 4.719026 TGTATGTATCTACTCCCTCCGT 57.281 45.455 0.00 0.00 0.00 4.69
712 713 4.142359 GCATGTATGTATCTACTCCCTCCG 60.142 50.000 0.00 0.00 0.00 4.63
713 714 4.142359 CGCATGTATGTATCTACTCCCTCC 60.142 50.000 0.00 0.00 0.00 4.30
714 715 4.142359 CCGCATGTATGTATCTACTCCCTC 60.142 50.000 0.00 0.00 0.00 4.30
715 716 3.764434 CCGCATGTATGTATCTACTCCCT 59.236 47.826 0.00 0.00 0.00 4.20
716 717 3.762288 TCCGCATGTATGTATCTACTCCC 59.238 47.826 0.00 0.00 0.00 4.30
717 718 5.047943 ACTTCCGCATGTATGTATCTACTCC 60.048 44.000 0.00 0.00 0.00 3.85
718 719 6.015027 ACTTCCGCATGTATGTATCTACTC 57.985 41.667 0.00 0.00 0.00 2.59
719 720 7.520451 TTACTTCCGCATGTATGTATCTACT 57.480 36.000 0.00 0.00 0.00 2.57
739 740 5.864418 TCCGAGCCACAAGTAATATTACT 57.136 39.130 20.27 20.27 45.43 2.24
754 760 2.550830 AACATACATCCATCCGAGCC 57.449 50.000 0.00 0.00 0.00 4.70
759 765 4.641396 TCCGATGAAACATACATCCATCC 58.359 43.478 0.00 0.00 40.40 3.51
762 768 6.183361 ACCTATTCCGATGAAACATACATCCA 60.183 38.462 0.00 0.00 40.40 3.41
767 773 6.513180 TCTGACCTATTCCGATGAAACATAC 58.487 40.000 0.00 0.00 33.32 2.39
777 783 3.756963 CGGATGTATCTGACCTATTCCGA 59.243 47.826 10.55 0.00 39.09 4.55
785 791 2.557490 GTCCCTACGGATGTATCTGACC 59.443 54.545 7.66 0.00 41.40 4.02
797 804 5.848833 AATACTCTAACTTGTCCCTACGG 57.151 43.478 0.00 0.00 0.00 4.02
868 876 2.877866 TGGGCCCGTTTCTTTTCATTA 58.122 42.857 19.37 0.00 0.00 1.90
945 963 2.126189 GTTTACGGGCGCTCTCGT 60.126 61.111 22.06 22.06 42.55 4.18
946 964 3.245315 CGTTTACGGGCGCTCTCG 61.245 66.667 5.36 11.20 35.66 4.04
1413 1431 0.535102 ACCAGGAGTCAAAACCAGCG 60.535 55.000 0.00 0.00 0.00 5.18
1428 1446 7.872483 ACCATCAGTAAAAAGCATAAAAACCAG 59.128 33.333 0.00 0.00 0.00 4.00
1436 1454 6.480763 TCCAGAACCATCAGTAAAAAGCATA 58.519 36.000 0.00 0.00 0.00 3.14
1437 1455 5.324409 TCCAGAACCATCAGTAAAAAGCAT 58.676 37.500 0.00 0.00 0.00 3.79
1438 1456 4.724399 TCCAGAACCATCAGTAAAAAGCA 58.276 39.130 0.00 0.00 0.00 3.91
1439 1457 4.156739 CCTCCAGAACCATCAGTAAAAAGC 59.843 45.833 0.00 0.00 0.00 3.51
1440 1458 5.316987 ACCTCCAGAACCATCAGTAAAAAG 58.683 41.667 0.00 0.00 0.00 2.27
1441 1459 5.319043 ACCTCCAGAACCATCAGTAAAAA 57.681 39.130 0.00 0.00 0.00 1.94
1451 1469 1.227823 CACGCAACCTCCAGAACCA 60.228 57.895 0.00 0.00 0.00 3.67
1523 1541 3.639094 AGCTCACCTGATCTAGCGTAATT 59.361 43.478 0.00 0.00 39.94 1.40
1628 1646 6.845975 AGCATAAACCTCAATTCCCCATAAAT 59.154 34.615 0.00 0.00 0.00 1.40
1678 1696 5.483811 TGTATCACTTTCGTATTTCTGCCA 58.516 37.500 0.00 0.00 0.00 4.92
1776 1794 4.319177 AGAAACGATTCCTTTCCTCACAG 58.681 43.478 1.30 0.00 36.12 3.66
1803 1821 0.951558 AAATTGGCGACAGTGTGACC 59.048 50.000 0.00 1.81 44.54 4.02
1872 1890 2.959030 TCCGTGGATGGAGTAGAATGAG 59.041 50.000 0.00 0.00 33.05 2.90
1948 1966 0.465460 TGTGCTTCGCCCTTCAAACT 60.465 50.000 0.00 0.00 0.00 2.66
1952 1970 1.597854 CACTGTGCTTCGCCCTTCA 60.598 57.895 0.00 0.00 0.00 3.02
1953 1971 1.598130 ACACTGTGCTTCGCCCTTC 60.598 57.895 7.90 0.00 0.00 3.46
1968 1986 2.561569 ACTAGTGGTTCACTTGCACAC 58.438 47.619 5.86 0.00 42.59 3.82
2150 2168 3.243068 GGCCTTCAACATATAAACCTGCG 60.243 47.826 0.00 0.00 0.00 5.18
2202 2220 5.865552 CAGTGCATTCTTTATTTGAAGTGGG 59.134 40.000 0.00 0.00 0.00 4.61
2290 2308 0.178944 AAGGGTGGGGGTGCTTAAAC 60.179 55.000 0.00 0.00 0.00 2.01
2394 2413 1.425066 TGGCAGTCCAGTGGAATCTTT 59.575 47.619 15.09 0.00 37.47 2.52
2496 2515 5.106869 TGAGTGGTGACAAATAACGCAATAC 60.107 40.000 0.00 0.00 46.06 1.89
2528 2547 9.635520 CTGATGCAGAAAAAGAAGTCAATATTT 57.364 29.630 0.00 0.00 32.44 1.40
2575 2594 4.893524 TGATAATACACTGGACTGATCGGT 59.106 41.667 6.97 6.97 0.00 4.69
2647 2666 8.387190 TGAAGATGGAAAATATATGCTGTCTG 57.613 34.615 0.00 0.00 0.00 3.51
2651 2670 9.674824 GTCTTTGAAGATGGAAAATATATGCTG 57.325 33.333 0.00 0.00 37.39 4.41
2764 2783 3.412386 CAACCATATAGGGCTAAGTGGC 58.588 50.000 2.61 0.00 43.89 5.01
2771 2790 3.721575 TGATGTTCCAACCATATAGGGCT 59.278 43.478 2.61 0.00 43.89 5.19
2780 2799 1.774254 AGTCAGGTGATGTTCCAACCA 59.226 47.619 0.00 0.00 0.00 3.67
2791 2810 1.955778 CAACCATGCAAAGTCAGGTGA 59.044 47.619 0.00 0.00 31.86 4.02
2804 2823 8.087750 ACTACATTGAAAATAACACCAACCATG 58.912 33.333 0.00 0.00 0.00 3.66
2870 2890 7.981225 GGCCTTTAGATGCTCATTTTATTTGAA 59.019 33.333 0.00 0.00 0.00 2.69
2879 2899 4.864726 AGAAAGGCCTTTAGATGCTCATT 58.135 39.130 30.47 3.91 32.11 2.57
2880 2900 4.516652 AGAAAGGCCTTTAGATGCTCAT 57.483 40.909 30.47 4.51 32.11 2.90
2884 2904 4.021981 ACACAAAGAAAGGCCTTTAGATGC 60.022 41.667 30.47 17.37 34.85 3.91
2885 2905 5.712152 ACACAAAGAAAGGCCTTTAGATG 57.288 39.130 30.47 26.72 34.85 2.90
2886 2906 6.543735 AGTACACAAAGAAAGGCCTTTAGAT 58.456 36.000 30.47 16.54 34.85 1.98
2889 2909 5.937111 AGAGTACACAAAGAAAGGCCTTTA 58.063 37.500 30.47 9.88 34.85 1.85
2891 2911 4.439253 AGAGTACACAAAGAAAGGCCTT 57.561 40.909 13.78 13.78 0.00 4.35
2892 2912 4.137543 CAAGAGTACACAAAGAAAGGCCT 58.862 43.478 0.00 0.00 0.00 5.19
2893 2913 3.304726 GCAAGAGTACACAAAGAAAGGCC 60.305 47.826 0.00 0.00 0.00 5.19
2980 3007 3.236047 TGCAGAAGACTACAGTAACCCA 58.764 45.455 0.00 0.00 0.00 4.51
3039 3066 9.553064 AAGCCAAAGAGTAATAGTCATCATTAG 57.447 33.333 0.00 0.00 0.00 1.73
3049 3076 8.099364 TCAACTGAAAAGCCAAAGAGTAATAG 57.901 34.615 0.00 0.00 0.00 1.73
3094 3121 0.519961 GAAAAACGGGGACACCATCG 59.480 55.000 0.00 0.00 40.22 3.84
3157 3187 8.619546 AGCATCTAAAATCTATCTGCTTTTGAC 58.380 33.333 0.00 0.00 35.06 3.18
3168 3198 9.624373 AACTGTCAATGAGCATCTAAAATCTAT 57.376 29.630 0.00 0.00 34.92 1.98
3245 3275 1.107945 CGTTTGTGGAACCCTGGTTT 58.892 50.000 2.55 0.00 38.60 3.27
3309 3339 2.757868 TGGCATGCTGGTGGTAATTAAC 59.242 45.455 18.92 0.00 0.00 2.01
3321 3351 3.864243 ACATTTTACCATTGGCATGCTG 58.136 40.909 18.92 8.11 0.00 4.41
3395 3429 7.207383 ACCTAAACATGTTGCTTAACTTTTCC 58.793 34.615 12.82 0.00 0.00 3.13
3401 3435 7.040961 TCACCTTACCTAAACATGTTGCTTAAC 60.041 37.037 12.82 0.00 0.00 2.01
3440 3475 1.553690 CCGTTGGTCTGTGGAGGGAT 61.554 60.000 0.00 0.00 0.00 3.85
3505 3540 6.040504 AGGGTTCCAAACAGAGTGTTAATTTC 59.959 38.462 0.00 0.00 40.14 2.17
3634 3671 6.835488 ACAAATCAACCAGTCCATATGCTAAT 59.165 34.615 0.00 0.00 0.00 1.73
3642 3679 7.015098 TGTTAATCAACAAATCAACCAGTCCAT 59.985 33.333 0.00 0.00 41.69 3.41
3694 3738 4.101898 TCAATTAATTCGGATCGGAGGGAA 59.898 41.667 0.00 0.24 0.00 3.97
3721 3765 7.564793 TGTCCATTGTACATTGTATAGAAGCT 58.435 34.615 14.80 0.00 0.00 3.74
3739 3783 3.807209 GCGGCCTCTATACAATGTCCATT 60.807 47.826 0.00 0.00 0.00 3.16
3740 3784 2.289694 GCGGCCTCTATACAATGTCCAT 60.290 50.000 0.00 0.00 0.00 3.41
3741 3785 1.070134 GCGGCCTCTATACAATGTCCA 59.930 52.381 0.00 0.00 0.00 4.02
3742 3786 1.797025 GCGGCCTCTATACAATGTCC 58.203 55.000 0.00 0.00 0.00 4.02
3743 3787 1.269621 ACGCGGCCTCTATACAATGTC 60.270 52.381 12.47 0.00 0.00 3.06
3744 3788 0.750850 ACGCGGCCTCTATACAATGT 59.249 50.000 12.47 0.00 0.00 2.71
3745 3789 1.269569 TGACGCGGCCTCTATACAATG 60.270 52.381 10.82 0.00 0.00 2.82
3746 3790 1.037493 TGACGCGGCCTCTATACAAT 58.963 50.000 10.82 0.00 0.00 2.71
3747 3791 1.037493 ATGACGCGGCCTCTATACAA 58.963 50.000 10.82 0.00 0.00 2.41
3748 3792 1.037493 AATGACGCGGCCTCTATACA 58.963 50.000 10.82 0.00 0.00 2.29
3749 3793 2.150397 AAATGACGCGGCCTCTATAC 57.850 50.000 10.82 0.00 0.00 1.47
3750 3794 3.859627 GCTTAAATGACGCGGCCTCTATA 60.860 47.826 10.82 0.00 0.00 1.31
3751 3795 2.755650 CTTAAATGACGCGGCCTCTAT 58.244 47.619 10.82 0.00 0.00 1.98
3766 3810 3.476552 CAGGACAGGTGAACAGCTTAAA 58.523 45.455 3.71 0.00 36.98 1.52
3948 4071 2.212761 ATGGGGGTGGGAAGGTGA 59.787 61.111 0.00 0.00 0.00 4.02
3950 4073 2.121042 ACATGGGGGTGGGAAGGT 60.121 61.111 0.00 0.00 0.00 3.50
3951 4074 2.237965 TCACATGGGGGTGGGAAGG 61.238 63.158 0.00 0.00 39.27 3.46
3952 4075 1.000896 GTCACATGGGGGTGGGAAG 60.001 63.158 0.00 0.00 39.27 3.46
3953 4076 2.543797 GGTCACATGGGGGTGGGAA 61.544 63.158 0.00 0.00 39.27 3.97
3954 4077 2.938798 GGTCACATGGGGGTGGGA 60.939 66.667 0.00 0.00 39.27 4.37
4064 4187 6.547141 TCAGGTATTTTCATCATAGCAAAGGG 59.453 38.462 0.00 0.00 0.00 3.95
4118 4241 7.119846 ACAATAGCGCTTCTTCTGTTTCTTAAT 59.880 33.333 18.68 0.00 0.00 1.40
4216 4339 3.555966 CTGAACCAGGAAGGAAGTTGTT 58.444 45.455 0.00 0.00 41.22 2.83
4322 4445 7.829211 AGCTTAGGACAGCAATAAGAAACATAA 59.171 33.333 0.00 0.00 42.84 1.90
4366 4489 3.662759 ACCAACCTGAAGAAACCAGAA 57.337 42.857 0.00 0.00 33.65 3.02
4457 4580 8.189460 GGATGTTAGTAGTCAAGTAAGGTACAG 58.811 40.741 0.00 0.00 0.00 2.74
4509 4632 3.874383 TCCCAACCAGAATTTCTGTCA 57.126 42.857 21.75 0.39 42.80 3.58
4620 4743 1.761449 TGTGTGCTCAAAGCCTCAAA 58.239 45.000 0.00 0.00 41.51 2.69
4621 4744 1.985473 ATGTGTGCTCAAAGCCTCAA 58.015 45.000 0.00 0.00 41.51 3.02
4622 4745 2.857186 TATGTGTGCTCAAAGCCTCA 57.143 45.000 0.00 0.00 41.51 3.86
4623 4746 4.708726 AAATATGTGTGCTCAAAGCCTC 57.291 40.909 0.00 0.00 41.51 4.70
4624 4747 4.768968 AGAAAATATGTGTGCTCAAAGCCT 59.231 37.500 0.00 0.00 41.51 4.58
4625 4748 5.064441 AGAAAATATGTGTGCTCAAAGCC 57.936 39.130 0.00 0.00 41.51 4.35
4626 4749 5.570589 GTGAGAAAATATGTGTGCTCAAAGC 59.429 40.000 0.00 0.00 42.82 3.51
4627 4750 6.906659 AGTGAGAAAATATGTGTGCTCAAAG 58.093 36.000 0.00 0.00 34.57 2.77
4989 5120 6.578020 TTTTACGAAGGCAGTATGATAACG 57.422 37.500 0.00 0.00 39.69 3.18
5037 5168 2.603110 TGCGCGAGTGTAAATTCTGATC 59.397 45.455 12.10 0.00 0.00 2.92
5126 5257 2.751436 CACCGCCCCTCCACAATG 60.751 66.667 0.00 0.00 0.00 2.82
5497 5628 9.745880 CCATCATATTCTTTTCTTTCCATGAAG 57.254 33.333 0.00 0.00 0.00 3.02
5528 5659 4.009675 GTGTCATTTATGCTGGTTCCAGA 58.990 43.478 21.32 7.98 36.24 3.86
5529 5660 3.758023 TGTGTCATTTATGCTGGTTCCAG 59.242 43.478 13.88 13.88 37.15 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.