Multiple sequence alignment - TraesCS7A01G170500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G170500 chr7A 100.000 2501 0 0 1 2501 126553175 126555675 0.000000e+00 4619
1 TraesCS7A01G170500 chr4A 98.273 1679 29 0 823 2501 631910461 631908783 0.000000e+00 2940
2 TraesCS7A01G170500 chr1B 96.838 1708 52 2 795 2501 141767593 141765887 0.000000e+00 2854
3 TraesCS7A01G170500 chr1B 85.211 1731 224 14 792 2501 590988875 590990594 0.000000e+00 1749
4 TraesCS7A01G170500 chr1A 87.529 1724 192 11 799 2501 361956704 361954983 0.000000e+00 1971
5 TraesCS7A01G170500 chr6B 83.767 1423 218 11 795 2207 42853744 42852325 0.000000e+00 1336
6 TraesCS7A01G170500 chr5A 80.610 1738 293 34 794 2501 673648089 673646366 0.000000e+00 1303
7 TraesCS7A01G170500 chr5A 80.472 1736 301 26 794 2501 673630773 673629048 0.000000e+00 1293
8 TraesCS7A01G170500 chr2A 89.839 994 95 4 792 1783 731205723 731206712 0.000000e+00 1271
9 TraesCS7A01G170500 chr2A 85.150 734 86 11 1781 2495 731228235 731228964 0.000000e+00 730
10 TraesCS7A01G170500 chr7D 92.356 798 41 7 6 794 123651388 123652174 0.000000e+00 1118
11 TraesCS7A01G170500 chr6D 84.257 1137 165 14 795 1924 472212779 472211650 0.000000e+00 1096
12 TraesCS7A01G170500 chr6D 78.731 583 95 16 1944 2501 472210062 472209484 1.830000e-96 363
13 TraesCS7A01G170500 chr7B 93.452 733 44 1 6 738 85125136 85125864 0.000000e+00 1085
14 TraesCS7A01G170500 chr1D 82.525 1093 178 13 795 1878 302906422 302905334 0.000000e+00 948
15 TraesCS7A01G170500 chr3A 81.586 1097 189 12 795 1884 360862070 360860980 0.000000e+00 894
16 TraesCS7A01G170500 chr3D 82.567 522 69 9 2000 2501 114224852 114224333 8.210000e-120 440


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G170500 chr7A 126553175 126555675 2500 False 4619.0 4619 100.000 1 2501 1 chr7A.!!$F1 2500
1 TraesCS7A01G170500 chr4A 631908783 631910461 1678 True 2940.0 2940 98.273 823 2501 1 chr4A.!!$R1 1678
2 TraesCS7A01G170500 chr1B 141765887 141767593 1706 True 2854.0 2854 96.838 795 2501 1 chr1B.!!$R1 1706
3 TraesCS7A01G170500 chr1B 590988875 590990594 1719 False 1749.0 1749 85.211 792 2501 1 chr1B.!!$F1 1709
4 TraesCS7A01G170500 chr1A 361954983 361956704 1721 True 1971.0 1971 87.529 799 2501 1 chr1A.!!$R1 1702
5 TraesCS7A01G170500 chr6B 42852325 42853744 1419 True 1336.0 1336 83.767 795 2207 1 chr6B.!!$R1 1412
6 TraesCS7A01G170500 chr5A 673646366 673648089 1723 True 1303.0 1303 80.610 794 2501 1 chr5A.!!$R2 1707
7 TraesCS7A01G170500 chr5A 673629048 673630773 1725 True 1293.0 1293 80.472 794 2501 1 chr5A.!!$R1 1707
8 TraesCS7A01G170500 chr2A 731205723 731206712 989 False 1271.0 1271 89.839 792 1783 1 chr2A.!!$F1 991
9 TraesCS7A01G170500 chr2A 731228235 731228964 729 False 730.0 730 85.150 1781 2495 1 chr2A.!!$F2 714
10 TraesCS7A01G170500 chr7D 123651388 123652174 786 False 1118.0 1118 92.356 6 794 1 chr7D.!!$F1 788
11 TraesCS7A01G170500 chr6D 472209484 472212779 3295 True 729.5 1096 81.494 795 2501 2 chr6D.!!$R1 1706
12 TraesCS7A01G170500 chr7B 85125136 85125864 728 False 1085.0 1085 93.452 6 738 1 chr7B.!!$F1 732
13 TraesCS7A01G170500 chr1D 302905334 302906422 1088 True 948.0 948 82.525 795 1878 1 chr1D.!!$R1 1083
14 TraesCS7A01G170500 chr3A 360860980 360862070 1090 True 894.0 894 81.586 795 1884 1 chr3A.!!$R1 1089
15 TraesCS7A01G170500 chr3D 114224333 114224852 519 True 440.0 440 82.567 2000 2501 1 chr3D.!!$R1 501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
417 419 0.033366 CCGACCGCACATCCATGATA 59.967 55.0 0.0 0.0 0.0 2.15 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1878 2413 1.457346 GATGGACTTCCTGCTGGTTG 58.543 55.0 9.73 6.34 36.82 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 87 2.029380 AGTTTTCAAACCTTATGCCCGC 60.029 45.455 0.00 0.00 39.71 6.13
98 100 2.438975 CCCGCACATGGCATGACT 60.439 61.111 32.74 9.75 45.17 3.41
99 101 2.048023 CCCGCACATGGCATGACTT 61.048 57.895 32.74 8.95 45.17 3.01
100 102 1.138036 CCGCACATGGCATGACTTG 59.862 57.895 32.74 21.14 45.17 3.16
101 103 1.307355 CCGCACATGGCATGACTTGA 61.307 55.000 32.74 0.00 45.17 3.02
102 104 0.522626 CGCACATGGCATGACTTGAA 59.477 50.000 32.74 0.00 45.17 2.69
103 105 1.133598 CGCACATGGCATGACTTGAAT 59.866 47.619 32.74 6.58 45.17 2.57
104 106 2.416296 CGCACATGGCATGACTTGAATT 60.416 45.455 32.74 5.79 45.17 2.17
105 107 3.592059 GCACATGGCATGACTTGAATTT 58.408 40.909 32.74 5.02 43.97 1.82
106 108 4.674885 CGCACATGGCATGACTTGAATTTA 60.675 41.667 32.74 0.00 45.17 1.40
107 109 5.353938 GCACATGGCATGACTTGAATTTAT 58.646 37.500 32.74 3.68 43.97 1.40
108 110 5.233476 GCACATGGCATGACTTGAATTTATG 59.767 40.000 32.74 16.52 43.97 1.90
109 111 6.334989 CACATGGCATGACTTGAATTTATGT 58.665 36.000 32.74 6.27 0.00 2.29
110 112 6.254804 CACATGGCATGACTTGAATTTATGTG 59.745 38.462 32.74 14.41 36.76 3.21
111 113 5.981088 TGGCATGACTTGAATTTATGTGT 57.019 34.783 0.00 0.00 0.00 3.72
112 114 7.122501 ACATGGCATGACTTGAATTTATGTGTA 59.877 33.333 32.74 0.00 0.00 2.90
113 115 6.851609 TGGCATGACTTGAATTTATGTGTAC 58.148 36.000 0.00 0.00 0.00 2.90
114 116 6.432472 TGGCATGACTTGAATTTATGTGTACA 59.568 34.615 0.00 0.00 0.00 2.90
115 117 6.747280 GGCATGACTTGAATTTATGTGTACAC 59.253 38.462 19.36 19.36 0.00 2.90
116 118 6.747280 GCATGACTTGAATTTATGTGTACACC 59.253 38.462 22.91 6.39 0.00 4.16
117 119 7.362056 GCATGACTTGAATTTATGTGTACACCT 60.362 37.037 22.91 15.80 0.00 4.00
118 120 7.667043 TGACTTGAATTTATGTGTACACCTC 57.333 36.000 22.91 10.11 0.00 3.85
119 121 7.220740 TGACTTGAATTTATGTGTACACCTCA 58.779 34.615 22.91 12.29 0.00 3.86
120 122 7.882791 TGACTTGAATTTATGTGTACACCTCAT 59.117 33.333 22.91 12.46 0.00 2.90
121 123 8.635765 ACTTGAATTTATGTGTACACCTCATT 57.364 30.769 22.91 14.73 0.00 2.57
122 124 9.077885 ACTTGAATTTATGTGTACACCTCATTT 57.922 29.630 22.91 11.21 0.00 2.32
123 125 9.912634 CTTGAATTTATGTGTACACCTCATTTT 57.087 29.630 22.91 9.72 0.00 1.82
129 131 9.508642 TTTATGTGTACACCTCATTTTATGTGA 57.491 29.630 22.91 0.00 33.08 3.58
130 132 6.795098 TGTGTACACCTCATTTTATGTGAC 57.205 37.500 22.91 0.00 33.08 3.67
131 133 6.292150 TGTGTACACCTCATTTTATGTGACA 58.708 36.000 22.91 0.00 33.08 3.58
132 134 6.768381 TGTGTACACCTCATTTTATGTGACAA 59.232 34.615 22.91 0.00 33.08 3.18
133 135 7.446931 TGTGTACACCTCATTTTATGTGACAAT 59.553 33.333 22.91 0.00 33.08 2.71
134 136 8.941977 GTGTACACCTCATTTTATGTGACAATA 58.058 33.333 15.42 0.00 33.08 1.90
135 137 9.508642 TGTACACCTCATTTTATGTGACAATAA 57.491 29.630 0.00 0.00 33.08 1.40
188 190 9.691362 TGAATATAGTTGGAAAAACAAAGAAGC 57.309 29.630 0.00 0.00 31.17 3.86
189 191 9.140286 GAATATAGTTGGAAAAACAAAGAAGCC 57.860 33.333 0.00 0.00 31.17 4.35
190 192 4.137116 AGTTGGAAAAACAAAGAAGCCC 57.863 40.909 0.00 0.00 31.17 5.19
191 193 3.517500 AGTTGGAAAAACAAAGAAGCCCA 59.482 39.130 0.00 0.00 31.17 5.36
192 194 3.535280 TGGAAAAACAAAGAAGCCCAC 57.465 42.857 0.00 0.00 0.00 4.61
193 195 3.103742 TGGAAAAACAAAGAAGCCCACT 58.896 40.909 0.00 0.00 0.00 4.00
194 196 4.282496 TGGAAAAACAAAGAAGCCCACTA 58.718 39.130 0.00 0.00 0.00 2.74
195 197 4.712337 TGGAAAAACAAAGAAGCCCACTAA 59.288 37.500 0.00 0.00 0.00 2.24
196 198 5.163457 TGGAAAAACAAAGAAGCCCACTAAG 60.163 40.000 0.00 0.00 0.00 2.18
197 199 5.163447 GGAAAAACAAAGAAGCCCACTAAGT 60.163 40.000 0.00 0.00 0.00 2.24
198 200 5.932619 AAAACAAAGAAGCCCACTAAGTT 57.067 34.783 0.00 0.00 0.00 2.66
199 201 5.515797 AAACAAAGAAGCCCACTAAGTTC 57.484 39.130 0.00 0.00 0.00 3.01
200 202 4.164843 ACAAAGAAGCCCACTAAGTTCA 57.835 40.909 0.00 0.00 0.00 3.18
201 203 4.532834 ACAAAGAAGCCCACTAAGTTCAA 58.467 39.130 0.00 0.00 0.00 2.69
202 204 4.338400 ACAAAGAAGCCCACTAAGTTCAAC 59.662 41.667 0.00 0.00 0.00 3.18
203 205 3.141767 AGAAGCCCACTAAGTTCAACC 57.858 47.619 0.00 0.00 0.00 3.77
204 206 2.441750 AGAAGCCCACTAAGTTCAACCA 59.558 45.455 0.00 0.00 0.00 3.67
205 207 3.074538 AGAAGCCCACTAAGTTCAACCAT 59.925 43.478 0.00 0.00 0.00 3.55
206 208 4.288626 AGAAGCCCACTAAGTTCAACCATA 59.711 41.667 0.00 0.00 0.00 2.74
207 209 4.862641 AGCCCACTAAGTTCAACCATAT 57.137 40.909 0.00 0.00 0.00 1.78
208 210 5.193099 AGCCCACTAAGTTCAACCATATT 57.807 39.130 0.00 0.00 0.00 1.28
209 211 4.949856 AGCCCACTAAGTTCAACCATATTG 59.050 41.667 0.00 0.00 0.00 1.90
210 212 4.097892 GCCCACTAAGTTCAACCATATTGG 59.902 45.833 2.05 2.05 45.02 3.16
211 213 5.505780 CCCACTAAGTTCAACCATATTGGA 58.494 41.667 8.25 0.00 40.96 3.53
212 214 5.949354 CCCACTAAGTTCAACCATATTGGAA 59.051 40.000 8.25 0.00 40.96 3.53
213 215 6.435904 CCCACTAAGTTCAACCATATTGGAAA 59.564 38.462 8.25 0.00 40.96 3.13
214 216 7.124147 CCCACTAAGTTCAACCATATTGGAAAT 59.876 37.037 8.25 0.00 40.96 2.17
215 217 8.531146 CCACTAAGTTCAACCATATTGGAAATT 58.469 33.333 0.00 0.00 40.96 1.82
218 220 9.736023 CTAAGTTCAACCATATTGGAAATTAGC 57.264 33.333 0.00 0.00 40.96 3.09
219 221 7.961326 AGTTCAACCATATTGGAAATTAGCT 57.039 32.000 0.00 0.00 40.96 3.32
220 222 8.000780 AGTTCAACCATATTGGAAATTAGCTC 57.999 34.615 0.00 0.00 40.96 4.09
221 223 7.836183 AGTTCAACCATATTGGAAATTAGCTCT 59.164 33.333 0.00 0.00 40.96 4.09
222 224 9.120538 GTTCAACCATATTGGAAATTAGCTCTA 57.879 33.333 0.00 0.00 40.96 2.43
223 225 8.908786 TCAACCATATTGGAAATTAGCTCTAG 57.091 34.615 0.00 0.00 40.96 2.43
224 226 7.445402 TCAACCATATTGGAAATTAGCTCTAGC 59.555 37.037 0.00 0.00 40.96 3.42
226 228 8.207350 ACCATATTGGAAATTAGCTCTAGCTA 57.793 34.615 7.61 7.61 45.33 3.32
227 229 8.317679 ACCATATTGGAAATTAGCTCTAGCTAG 58.682 37.037 15.01 15.01 46.58 3.42
228 230 8.317679 CCATATTGGAAATTAGCTCTAGCTAGT 58.682 37.037 20.10 6.50 46.58 2.57
275 277 8.918202 TTCTTTACAGACATTGTTACATTCCT 57.082 30.769 0.00 0.00 41.29 3.36
276 278 8.918202 TCTTTACAGACATTGTTACATTCCTT 57.082 30.769 0.00 0.00 41.29 3.36
277 279 9.349713 TCTTTACAGACATTGTTACATTCCTTT 57.650 29.630 0.00 0.00 41.29 3.11
278 280 9.965824 CTTTACAGACATTGTTACATTCCTTTT 57.034 29.630 0.00 0.00 41.29 2.27
301 303 7.712264 TTTTTATCGTCTTCAACCTTCGTAA 57.288 32.000 0.00 0.00 0.00 3.18
302 304 6.695292 TTTATCGTCTTCAACCTTCGTAAC 57.305 37.500 0.00 0.00 0.00 2.50
303 305 3.996150 TCGTCTTCAACCTTCGTAACT 57.004 42.857 0.00 0.00 0.00 2.24
304 306 5.633830 ATCGTCTTCAACCTTCGTAACTA 57.366 39.130 0.00 0.00 0.00 2.24
305 307 5.437289 TCGTCTTCAACCTTCGTAACTAA 57.563 39.130 0.00 0.00 0.00 2.24
306 308 6.017400 TCGTCTTCAACCTTCGTAACTAAT 57.983 37.500 0.00 0.00 0.00 1.73
307 309 6.449698 TCGTCTTCAACCTTCGTAACTAATT 58.550 36.000 0.00 0.00 0.00 1.40
308 310 6.364165 TCGTCTTCAACCTTCGTAACTAATTG 59.636 38.462 0.00 0.00 0.00 2.32
309 311 6.364165 CGTCTTCAACCTTCGTAACTAATTGA 59.636 38.462 0.00 0.00 0.00 2.57
310 312 7.095940 CGTCTTCAACCTTCGTAACTAATTGAA 60.096 37.037 0.00 0.00 34.42 2.69
311 313 8.008279 GTCTTCAACCTTCGTAACTAATTGAAC 58.992 37.037 0.00 0.00 32.69 3.18
312 314 7.711772 TCTTCAACCTTCGTAACTAATTGAACA 59.288 33.333 0.00 0.00 32.69 3.18
313 315 7.181143 TCAACCTTCGTAACTAATTGAACAC 57.819 36.000 0.00 0.00 0.00 3.32
314 316 6.203338 TCAACCTTCGTAACTAATTGAACACC 59.797 38.462 0.00 0.00 0.00 4.16
315 317 5.613329 ACCTTCGTAACTAATTGAACACCA 58.387 37.500 0.00 0.00 0.00 4.17
316 318 5.467735 ACCTTCGTAACTAATTGAACACCAC 59.532 40.000 0.00 0.00 0.00 4.16
317 319 5.106830 CCTTCGTAACTAATTGAACACCACC 60.107 44.000 0.00 0.00 0.00 4.61
318 320 4.958509 TCGTAACTAATTGAACACCACCA 58.041 39.130 0.00 0.00 0.00 4.17
319 321 4.751098 TCGTAACTAATTGAACACCACCAC 59.249 41.667 0.00 0.00 0.00 4.16
320 322 4.512198 CGTAACTAATTGAACACCACCACA 59.488 41.667 0.00 0.00 0.00 4.17
321 323 5.180492 CGTAACTAATTGAACACCACCACAT 59.820 40.000 0.00 0.00 0.00 3.21
322 324 5.705609 AACTAATTGAACACCACCACATC 57.294 39.130 0.00 0.00 0.00 3.06
323 325 4.724399 ACTAATTGAACACCACCACATCA 58.276 39.130 0.00 0.00 0.00 3.07
324 326 5.136828 ACTAATTGAACACCACCACATCAA 58.863 37.500 0.00 0.00 34.80 2.57
325 327 5.774690 ACTAATTGAACACCACCACATCAAT 59.225 36.000 0.00 0.00 41.20 2.57
326 328 6.945435 ACTAATTGAACACCACCACATCAATA 59.055 34.615 0.00 0.00 39.19 1.90
327 329 6.855763 AATTGAACACCACCACATCAATAT 57.144 33.333 0.00 0.00 39.19 1.28
328 330 7.953005 AATTGAACACCACCACATCAATATA 57.047 32.000 0.00 0.00 39.19 0.86
329 331 8.537728 AATTGAACACCACCACATCAATATAT 57.462 30.769 0.00 0.00 39.19 0.86
330 332 7.953005 TTGAACACCACCACATCAATATATT 57.047 32.000 0.00 0.00 0.00 1.28
331 333 7.953005 TGAACACCACCACATCAATATATTT 57.047 32.000 0.00 0.00 0.00 1.40
332 334 8.359875 TGAACACCACCACATCAATATATTTT 57.640 30.769 0.00 0.00 0.00 1.82
333 335 8.811017 TGAACACCACCACATCAATATATTTTT 58.189 29.630 0.00 0.00 0.00 1.94
334 336 9.086336 GAACACCACCACATCAATATATTTTTG 57.914 33.333 0.00 0.00 0.00 2.44
335 337 7.555087 ACACCACCACATCAATATATTTTTGG 58.445 34.615 0.00 3.05 0.00 3.28
336 338 7.398618 ACACCACCACATCAATATATTTTTGGA 59.601 33.333 14.26 3.09 0.00 3.53
337 339 8.256605 CACCACCACATCAATATATTTTTGGAA 58.743 33.333 14.26 0.00 0.00 3.53
338 340 8.820831 ACCACCACATCAATATATTTTTGGAAA 58.179 29.630 14.26 0.00 0.00 3.13
339 341 9.664332 CCACCACATCAATATATTTTTGGAAAA 57.336 29.630 14.26 0.00 0.00 2.29
353 355 7.571080 TTTTTGGAAAAACTATACCGTGACT 57.429 32.000 0.00 0.00 33.29 3.41
354 356 6.548441 TTTGGAAAAACTATACCGTGACTG 57.452 37.500 0.00 0.00 0.00 3.51
355 357 5.217978 TGGAAAAACTATACCGTGACTGT 57.782 39.130 0.00 0.00 0.00 3.55
356 358 5.613329 TGGAAAAACTATACCGTGACTGTT 58.387 37.500 0.00 0.00 0.00 3.16
357 359 5.697633 TGGAAAAACTATACCGTGACTGTTC 59.302 40.000 0.00 0.00 0.00 3.18
358 360 5.164022 GGAAAAACTATACCGTGACTGTTCG 60.164 44.000 0.00 0.64 0.00 3.95
359 361 4.771590 AAACTATACCGTGACTGTTCGA 57.228 40.909 7.65 0.00 0.00 3.71
360 362 4.771590 AACTATACCGTGACTGTTCGAA 57.228 40.909 0.00 0.00 0.00 3.71
361 363 4.352600 ACTATACCGTGACTGTTCGAAG 57.647 45.455 0.00 0.00 0.00 3.79
362 364 2.649331 ATACCGTGACTGTTCGAAGG 57.351 50.000 0.00 0.00 0.00 3.46
363 365 1.321474 TACCGTGACTGTTCGAAGGT 58.679 50.000 0.00 2.89 32.35 3.50
364 366 1.321474 ACCGTGACTGTTCGAAGGTA 58.679 50.000 0.00 0.00 0.00 3.08
365 367 1.891150 ACCGTGACTGTTCGAAGGTAT 59.109 47.619 0.00 0.00 0.00 2.73
366 368 2.298163 ACCGTGACTGTTCGAAGGTATT 59.702 45.455 0.00 0.00 0.00 1.89
367 369 2.921754 CCGTGACTGTTCGAAGGTATTC 59.078 50.000 0.00 0.00 0.00 1.75
368 370 3.367087 CCGTGACTGTTCGAAGGTATTCT 60.367 47.826 0.00 0.00 32.93 2.40
369 371 3.852536 CGTGACTGTTCGAAGGTATTCTC 59.147 47.826 0.00 0.00 32.93 2.87
370 372 4.174762 GTGACTGTTCGAAGGTATTCTCC 58.825 47.826 0.00 0.00 32.93 3.71
371 373 3.194968 TGACTGTTCGAAGGTATTCTCCC 59.805 47.826 0.00 0.00 32.93 4.30
372 374 3.170717 ACTGTTCGAAGGTATTCTCCCA 58.829 45.455 0.00 0.00 32.93 4.37
373 375 3.056035 ACTGTTCGAAGGTATTCTCCCAC 60.056 47.826 0.00 0.00 32.93 4.61
374 376 2.235402 TGTTCGAAGGTATTCTCCCACC 59.765 50.000 0.00 0.00 32.93 4.61
375 377 1.108776 TCGAAGGTATTCTCCCACCG 58.891 55.000 0.00 0.00 39.94 4.94
376 378 0.822164 CGAAGGTATTCTCCCACCGT 59.178 55.000 0.00 0.00 39.94 4.83
377 379 1.470979 CGAAGGTATTCTCCCACCGTG 60.471 57.143 0.00 0.00 39.94 4.94
378 380 1.829222 GAAGGTATTCTCCCACCGTGA 59.171 52.381 0.00 0.00 39.94 4.35
379 381 1.192428 AGGTATTCTCCCACCGTGAC 58.808 55.000 0.00 0.00 39.94 3.67
380 382 1.192428 GGTATTCTCCCACCGTGACT 58.808 55.000 0.00 0.00 0.00 3.41
381 383 1.136500 GGTATTCTCCCACCGTGACTC 59.864 57.143 0.00 0.00 0.00 3.36
382 384 1.100510 TATTCTCCCACCGTGACTCG 58.899 55.000 0.00 0.00 39.52 4.18
393 395 2.631418 CGTGACTCGGTTACTGTCAT 57.369 50.000 8.76 0.00 41.78 3.06
394 396 2.942710 CGTGACTCGGTTACTGTCATT 58.057 47.619 8.76 0.00 41.78 2.57
395 397 2.915463 CGTGACTCGGTTACTGTCATTC 59.085 50.000 8.76 0.05 41.78 2.67
396 398 3.251571 GTGACTCGGTTACTGTCATTCC 58.748 50.000 8.76 0.00 41.78 3.01
397 399 2.894765 TGACTCGGTTACTGTCATTCCA 59.105 45.455 0.00 0.00 36.03 3.53
398 400 3.251571 GACTCGGTTACTGTCATTCCAC 58.748 50.000 0.00 0.00 0.00 4.02
399 401 2.028385 ACTCGGTTACTGTCATTCCACC 60.028 50.000 0.00 0.00 0.00 4.61
400 402 1.067425 TCGGTTACTGTCATTCCACCG 60.067 52.381 2.09 2.09 46.89 4.94
401 403 2.754946 GGTTACTGTCATTCCACCGA 57.245 50.000 0.00 0.00 0.00 4.69
402 404 2.344025 GGTTACTGTCATTCCACCGAC 58.656 52.381 0.00 0.00 0.00 4.79
403 405 2.344025 GTTACTGTCATTCCACCGACC 58.656 52.381 0.00 0.00 0.00 4.79
404 406 0.528924 TACTGTCATTCCACCGACCG 59.471 55.000 0.00 0.00 0.00 4.79
405 407 2.047655 TGTCATTCCACCGACCGC 60.048 61.111 0.00 0.00 0.00 5.68
406 408 2.047655 GTCATTCCACCGACCGCA 60.048 61.111 0.00 0.00 0.00 5.69
407 409 2.047655 TCATTCCACCGACCGCAC 60.048 61.111 0.00 0.00 0.00 5.34
408 410 2.358125 CATTCCACCGACCGCACA 60.358 61.111 0.00 0.00 0.00 4.57
409 411 1.745115 CATTCCACCGACCGCACAT 60.745 57.895 0.00 0.00 0.00 3.21
410 412 1.449601 ATTCCACCGACCGCACATC 60.450 57.895 0.00 0.00 0.00 3.06
411 413 2.869503 ATTCCACCGACCGCACATCC 62.870 60.000 0.00 0.00 0.00 3.51
412 414 4.386951 CCACCGACCGCACATCCA 62.387 66.667 0.00 0.00 0.00 3.41
413 415 2.125147 CACCGACCGCACATCCAT 60.125 61.111 0.00 0.00 0.00 3.41
414 416 2.125147 ACCGACCGCACATCCATG 60.125 61.111 0.00 0.00 0.00 3.66
415 417 2.186644 CCGACCGCACATCCATGA 59.813 61.111 0.00 0.00 0.00 3.07
416 418 1.227645 CCGACCGCACATCCATGAT 60.228 57.895 0.00 0.00 0.00 2.45
417 419 0.033366 CCGACCGCACATCCATGATA 59.967 55.000 0.00 0.00 0.00 2.15
418 420 1.139989 CGACCGCACATCCATGATAC 58.860 55.000 0.00 0.00 0.00 2.24
419 421 1.537990 CGACCGCACATCCATGATACA 60.538 52.381 0.00 0.00 0.00 2.29
420 422 2.771089 GACCGCACATCCATGATACAT 58.229 47.619 0.00 0.00 0.00 2.29
421 423 3.141398 GACCGCACATCCATGATACATT 58.859 45.455 0.00 0.00 0.00 2.71
422 424 4.314961 GACCGCACATCCATGATACATTA 58.685 43.478 0.00 0.00 0.00 1.90
423 425 4.318332 ACCGCACATCCATGATACATTAG 58.682 43.478 0.00 0.00 0.00 1.73
424 426 3.125829 CCGCACATCCATGATACATTAGC 59.874 47.826 0.00 0.00 0.00 3.09
425 427 3.999001 CGCACATCCATGATACATTAGCT 59.001 43.478 0.00 0.00 0.00 3.32
426 428 4.092529 CGCACATCCATGATACATTAGCTC 59.907 45.833 0.00 0.00 0.00 4.09
427 429 4.999311 GCACATCCATGATACATTAGCTCA 59.001 41.667 0.00 0.00 0.00 4.26
428 430 5.646793 GCACATCCATGATACATTAGCTCAT 59.353 40.000 0.00 0.00 0.00 2.90
429 431 6.403309 GCACATCCATGATACATTAGCTCATG 60.403 42.308 6.34 6.34 43.71 3.07
430 432 6.653740 CACATCCATGATACATTAGCTCATGT 59.346 38.462 17.24 17.24 42.96 3.21
431 433 6.877855 ACATCCATGATACATTAGCTCATGTC 59.122 38.462 16.63 4.95 42.96 3.06
432 434 6.423776 TCCATGATACATTAGCTCATGTCA 57.576 37.500 16.63 10.32 42.96 3.58
433 435 6.226052 TCCATGATACATTAGCTCATGTCAC 58.774 40.000 16.63 12.18 42.96 3.67
434 436 5.119743 CCATGATACATTAGCTCATGTCACG 59.880 44.000 16.63 3.20 42.96 4.35
435 437 4.051237 TGATACATTAGCTCATGTCACGC 58.949 43.478 16.63 6.19 38.40 5.34
436 438 2.385013 ACATTAGCTCATGTCACGCA 57.615 45.000 7.74 0.00 31.26 5.24
437 439 2.698803 ACATTAGCTCATGTCACGCAA 58.301 42.857 7.74 0.00 31.26 4.85
438 440 3.073678 ACATTAGCTCATGTCACGCAAA 58.926 40.909 7.74 0.00 31.26 3.68
439 441 3.501828 ACATTAGCTCATGTCACGCAAAA 59.498 39.130 7.74 0.00 31.26 2.44
440 442 4.156556 ACATTAGCTCATGTCACGCAAAAT 59.843 37.500 7.74 0.00 31.26 1.82
441 443 4.764679 TTAGCTCATGTCACGCAAAATT 57.235 36.364 0.00 0.00 0.00 1.82
442 444 2.937591 AGCTCATGTCACGCAAAATTG 58.062 42.857 0.00 0.00 0.00 2.32
443 445 2.294233 AGCTCATGTCACGCAAAATTGT 59.706 40.909 0.00 0.00 0.00 2.71
444 446 3.052036 GCTCATGTCACGCAAAATTGTT 58.948 40.909 0.00 0.00 0.00 2.83
445 447 3.121261 GCTCATGTCACGCAAAATTGTTG 60.121 43.478 0.00 0.00 0.00 3.33
446 448 2.793790 TCATGTCACGCAAAATTGTTGC 59.206 40.909 1.15 1.15 41.71 4.17
447 449 2.575694 TGTCACGCAAAATTGTTGCT 57.424 40.000 9.78 0.00 42.87 3.91
448 450 2.191802 TGTCACGCAAAATTGTTGCTG 58.808 42.857 9.78 7.19 42.87 4.41
449 451 1.071305 GTCACGCAAAATTGTTGCTGC 60.071 47.619 9.78 0.00 42.87 5.25
450 452 0.928922 CACGCAAAATTGTTGCTGCA 59.071 45.000 9.78 0.00 42.87 4.41
451 453 1.527736 CACGCAAAATTGTTGCTGCAT 59.472 42.857 1.84 0.00 42.87 3.96
452 454 1.794116 ACGCAAAATTGTTGCTGCATC 59.206 42.857 1.84 2.97 42.87 3.91
453 455 1.201726 CGCAAAATTGTTGCTGCATCG 60.202 47.619 1.84 0.00 42.87 3.84
454 456 1.794116 GCAAAATTGTTGCTGCATCGT 59.206 42.857 1.84 0.00 41.87 3.73
455 457 2.985809 GCAAAATTGTTGCTGCATCGTA 59.014 40.909 1.84 0.00 41.87 3.43
456 458 3.613737 GCAAAATTGTTGCTGCATCGTAT 59.386 39.130 1.84 0.00 41.87 3.06
457 459 4.091800 GCAAAATTGTTGCTGCATCGTATT 59.908 37.500 1.84 4.31 41.87 1.89
458 460 5.543716 CAAAATTGTTGCTGCATCGTATTG 58.456 37.500 1.84 3.94 0.00 1.90
459 461 4.700268 AATTGTTGCTGCATCGTATTGA 57.300 36.364 1.84 0.00 0.00 2.57
460 462 4.906065 ATTGTTGCTGCATCGTATTGAT 57.094 36.364 1.84 0.00 38.01 2.57
461 463 4.700268 TTGTTGCTGCATCGTATTGATT 57.300 36.364 1.84 0.00 34.13 2.57
462 464 4.700268 TGTTGCTGCATCGTATTGATTT 57.300 36.364 1.84 0.00 34.13 2.17
463 465 4.661125 TGTTGCTGCATCGTATTGATTTC 58.339 39.130 1.84 0.00 34.13 2.17
464 466 4.155644 TGTTGCTGCATCGTATTGATTTCA 59.844 37.500 1.84 0.00 34.13 2.69
465 467 4.277257 TGCTGCATCGTATTGATTTCAC 57.723 40.909 0.00 0.00 34.13 3.18
466 468 3.688673 TGCTGCATCGTATTGATTTCACA 59.311 39.130 0.00 0.00 34.13 3.58
467 469 4.336153 TGCTGCATCGTATTGATTTCACAT 59.664 37.500 0.00 0.00 34.13 3.21
468 470 5.526846 TGCTGCATCGTATTGATTTCACATA 59.473 36.000 0.00 0.00 34.13 2.29
469 471 5.848036 GCTGCATCGTATTGATTTCACATAC 59.152 40.000 0.00 0.00 34.13 2.39
470 472 6.293081 GCTGCATCGTATTGATTTCACATACT 60.293 38.462 0.00 0.00 34.13 2.12
471 473 7.552458 TGCATCGTATTGATTTCACATACTT 57.448 32.000 0.00 0.00 34.13 2.24
472 474 7.984391 TGCATCGTATTGATTTCACATACTTT 58.016 30.769 0.00 0.00 34.13 2.66
473 475 8.458052 TGCATCGTATTGATTTCACATACTTTT 58.542 29.630 0.00 0.00 34.13 2.27
474 476 9.929722 GCATCGTATTGATTTCACATACTTTTA 57.070 29.630 9.28 0.00 34.13 1.52
516 518 8.635765 TGACCTAAATATGCTTTGGAATATCC 57.364 34.615 0.00 0.00 36.96 2.59
517 519 8.224025 TGACCTAAATATGCTTTGGAATATCCA 58.776 33.333 0.00 0.00 46.61 3.41
532 534 8.821686 TGGAATATCCAAATATGTTTCACACT 57.178 30.769 0.00 0.00 45.00 3.55
533 535 9.253832 TGGAATATCCAAATATGTTTCACACTT 57.746 29.630 0.00 0.00 45.00 3.16
537 539 9.693739 ATATCCAAATATGTTTCACACTTACCA 57.306 29.630 0.00 0.00 0.00 3.25
538 540 7.209471 TCCAAATATGTTTCACACTTACCAC 57.791 36.000 0.00 0.00 0.00 4.16
539 541 6.207810 TCCAAATATGTTTCACACTTACCACC 59.792 38.462 0.00 0.00 0.00 4.61
540 542 6.015856 CCAAATATGTTTCACACTTACCACCA 60.016 38.462 0.00 0.00 0.00 4.17
541 543 7.309744 CCAAATATGTTTCACACTTACCACCAT 60.310 37.037 0.00 0.00 0.00 3.55
542 544 7.775053 AATATGTTTCACACTTACCACCATT 57.225 32.000 0.00 0.00 0.00 3.16
543 545 5.705609 ATGTTTCACACTTACCACCATTC 57.294 39.130 0.00 0.00 0.00 2.67
544 546 3.562141 TGTTTCACACTTACCACCATTCG 59.438 43.478 0.00 0.00 0.00 3.34
545 547 3.478857 TTCACACTTACCACCATTCGT 57.521 42.857 0.00 0.00 0.00 3.85
546 548 4.603989 TTCACACTTACCACCATTCGTA 57.396 40.909 0.00 0.00 0.00 3.43
547 549 3.916761 TCACACTTACCACCATTCGTAC 58.083 45.455 0.00 0.00 0.00 3.67
548 550 3.575256 TCACACTTACCACCATTCGTACT 59.425 43.478 0.00 0.00 0.00 2.73
549 551 3.924686 CACACTTACCACCATTCGTACTC 59.075 47.826 0.00 0.00 0.00 2.59
550 552 3.056322 ACACTTACCACCATTCGTACTCC 60.056 47.826 0.00 0.00 0.00 3.85
551 553 3.194968 CACTTACCACCATTCGTACTCCT 59.805 47.826 0.00 0.00 0.00 3.69
552 554 3.194968 ACTTACCACCATTCGTACTCCTG 59.805 47.826 0.00 0.00 0.00 3.86
553 555 1.640917 ACCACCATTCGTACTCCTGT 58.359 50.000 0.00 0.00 0.00 4.00
554 556 1.549170 ACCACCATTCGTACTCCTGTC 59.451 52.381 0.00 0.00 0.00 3.51
555 557 1.469251 CCACCATTCGTACTCCTGTCG 60.469 57.143 0.00 0.00 0.00 4.35
556 558 1.471287 CACCATTCGTACTCCTGTCGA 59.529 52.381 0.00 0.00 0.00 4.20
557 559 2.099263 CACCATTCGTACTCCTGTCGAT 59.901 50.000 0.00 0.00 33.72 3.59
558 560 2.099263 ACCATTCGTACTCCTGTCGATG 59.901 50.000 0.00 0.00 33.72 3.84
559 561 2.357952 CCATTCGTACTCCTGTCGATGA 59.642 50.000 0.00 0.00 33.72 2.92
560 562 3.004839 CCATTCGTACTCCTGTCGATGAT 59.995 47.826 0.00 0.00 33.72 2.45
561 563 3.965292 TTCGTACTCCTGTCGATGATC 57.035 47.619 0.00 0.00 33.72 2.92
562 564 3.195471 TCGTACTCCTGTCGATGATCT 57.805 47.619 0.00 0.00 0.00 2.75
563 565 4.332428 TCGTACTCCTGTCGATGATCTA 57.668 45.455 0.00 0.00 0.00 1.98
564 566 4.056740 TCGTACTCCTGTCGATGATCTAC 58.943 47.826 0.00 0.00 0.00 2.59
565 567 3.808174 CGTACTCCTGTCGATGATCTACA 59.192 47.826 0.00 0.00 0.00 2.74
566 568 4.452795 CGTACTCCTGTCGATGATCTACAT 59.547 45.833 0.00 0.00 42.47 2.29
585 587 2.416680 TCAAATGATGATGACGCCCA 57.583 45.000 0.00 0.00 31.50 5.36
586 588 2.291365 TCAAATGATGATGACGCCCAG 58.709 47.619 0.00 0.00 31.50 4.45
587 589 2.019249 CAAATGATGATGACGCCCAGT 58.981 47.619 0.00 0.00 0.00 4.00
588 590 1.671979 AATGATGATGACGCCCAGTG 58.328 50.000 0.00 0.00 0.00 3.66
589 591 0.179037 ATGATGATGACGCCCAGTGG 60.179 55.000 0.63 0.63 0.00 4.00
608 610 3.540211 CGGAGCTTGAGACCATGTT 57.460 52.632 0.00 0.00 0.00 2.71
609 611 1.081892 CGGAGCTTGAGACCATGTTG 58.918 55.000 0.00 0.00 0.00 3.33
610 612 1.457346 GGAGCTTGAGACCATGTTGG 58.543 55.000 0.00 0.00 45.02 3.77
611 613 1.457346 GAGCTTGAGACCATGTTGGG 58.543 55.000 0.00 0.00 43.37 4.12
617 619 2.351276 GACCATGTTGGGCGGTCT 59.649 61.111 0.00 0.00 44.82 3.85
618 620 2.034066 ACCATGTTGGGCGGTCTG 59.966 61.111 0.00 0.00 43.37 3.51
619 621 2.751436 CCATGTTGGGCGGTCTGG 60.751 66.667 0.00 0.00 32.67 3.86
620 622 2.350895 CATGTTGGGCGGTCTGGA 59.649 61.111 0.00 0.00 0.00 3.86
621 623 2.040544 CATGTTGGGCGGTCTGGAC 61.041 63.158 0.00 0.00 0.00 4.02
622 624 3.605749 ATGTTGGGCGGTCTGGACG 62.606 63.158 0.00 0.00 0.00 4.79
623 625 3.998672 GTTGGGCGGTCTGGACGA 61.999 66.667 0.00 0.00 0.00 4.20
624 626 3.691342 TTGGGCGGTCTGGACGAG 61.691 66.667 0.00 0.00 0.00 4.18
628 630 4.357947 GCGGTCTGGACGAGCACA 62.358 66.667 12.39 0.00 40.13 4.57
629 631 2.338620 CGGTCTGGACGAGCACAA 59.661 61.111 0.00 0.00 40.13 3.33
630 632 2.022129 CGGTCTGGACGAGCACAAC 61.022 63.158 0.00 0.00 40.13 3.32
631 633 1.069090 GGTCTGGACGAGCACAACA 59.931 57.895 0.00 0.00 39.89 3.33
632 634 0.320771 GGTCTGGACGAGCACAACAT 60.321 55.000 0.00 0.00 39.89 2.71
633 635 1.067142 GGTCTGGACGAGCACAACATA 60.067 52.381 0.00 0.00 39.89 2.29
634 636 2.611971 GGTCTGGACGAGCACAACATAA 60.612 50.000 0.00 0.00 39.89 1.90
635 637 2.668457 GTCTGGACGAGCACAACATAAG 59.332 50.000 0.00 0.00 0.00 1.73
636 638 2.002586 CTGGACGAGCACAACATAAGG 58.997 52.381 0.00 0.00 0.00 2.69
637 639 1.338674 TGGACGAGCACAACATAAGGG 60.339 52.381 0.00 0.00 0.00 3.95
638 640 1.066430 GGACGAGCACAACATAAGGGA 60.066 52.381 0.00 0.00 0.00 4.20
639 641 2.614481 GGACGAGCACAACATAAGGGAA 60.614 50.000 0.00 0.00 0.00 3.97
640 642 3.270877 GACGAGCACAACATAAGGGAAT 58.729 45.455 0.00 0.00 0.00 3.01
641 643 4.439057 GACGAGCACAACATAAGGGAATA 58.561 43.478 0.00 0.00 0.00 1.75
642 644 4.442706 ACGAGCACAACATAAGGGAATAG 58.557 43.478 0.00 0.00 0.00 1.73
643 645 3.248602 CGAGCACAACATAAGGGAATAGC 59.751 47.826 0.00 0.00 0.00 2.97
644 646 4.455606 GAGCACAACATAAGGGAATAGCT 58.544 43.478 0.00 0.00 0.00 3.32
645 647 4.860022 AGCACAACATAAGGGAATAGCTT 58.140 39.130 0.00 0.00 0.00 3.74
646 648 4.641989 AGCACAACATAAGGGAATAGCTTG 59.358 41.667 0.00 0.00 0.00 4.01
647 649 4.399303 GCACAACATAAGGGAATAGCTTGT 59.601 41.667 0.00 0.00 0.00 3.16
648 650 5.677091 GCACAACATAAGGGAATAGCTTGTG 60.677 44.000 0.00 0.00 40.02 3.33
649 651 4.949856 ACAACATAAGGGAATAGCTTGTGG 59.050 41.667 0.00 0.00 0.00 4.17
650 652 4.170468 ACATAAGGGAATAGCTTGTGGG 57.830 45.455 0.00 0.00 0.00 4.61
651 653 2.729028 TAAGGGAATAGCTTGTGGGC 57.271 50.000 0.00 0.00 0.00 5.36
652 654 1.002857 AAGGGAATAGCTTGTGGGCT 58.997 50.000 0.00 0.00 45.29 5.19
653 655 0.548510 AGGGAATAGCTTGTGGGCTC 59.451 55.000 0.00 0.00 42.97 4.70
654 656 0.815615 GGGAATAGCTTGTGGGCTCG 60.816 60.000 0.00 0.00 42.97 5.03
655 657 0.107654 GGAATAGCTTGTGGGCTCGT 60.108 55.000 0.00 0.00 42.97 4.18
656 658 1.291132 GAATAGCTTGTGGGCTCGTC 58.709 55.000 0.00 0.00 42.97 4.20
657 659 0.905357 AATAGCTTGTGGGCTCGTCT 59.095 50.000 0.00 0.00 42.97 4.18
658 660 0.905357 ATAGCTTGTGGGCTCGTCTT 59.095 50.000 0.00 0.00 42.97 3.01
659 661 0.685097 TAGCTTGTGGGCTCGTCTTT 59.315 50.000 0.00 0.00 42.97 2.52
660 662 0.603975 AGCTTGTGGGCTCGTCTTTC 60.604 55.000 0.00 0.00 38.24 2.62
661 663 0.884704 GCTTGTGGGCTCGTCTTTCA 60.885 55.000 0.00 0.00 0.00 2.69
662 664 1.593196 CTTGTGGGCTCGTCTTTCAA 58.407 50.000 0.00 0.00 0.00 2.69
663 665 1.532868 CTTGTGGGCTCGTCTTTCAAG 59.467 52.381 0.00 0.00 0.00 3.02
664 666 0.250295 TGTGGGCTCGTCTTTCAAGG 60.250 55.000 0.00 0.00 0.00 3.61
665 667 1.302511 TGGGCTCGTCTTTCAAGGC 60.303 57.895 0.00 0.00 35.02 4.35
666 668 2.041115 GGGCTCGTCTTTCAAGGCC 61.041 63.158 0.00 0.00 46.79 5.19
667 669 2.041115 GGCTCGTCTTTCAAGGCCC 61.041 63.158 0.00 0.00 34.19 5.80
668 670 1.302511 GCTCGTCTTTCAAGGCCCA 60.303 57.895 0.00 0.00 0.00 5.36
669 671 0.889186 GCTCGTCTTTCAAGGCCCAA 60.889 55.000 0.00 0.00 0.00 4.12
670 672 1.160137 CTCGTCTTTCAAGGCCCAAG 58.840 55.000 0.00 0.00 0.00 3.61
671 673 0.762418 TCGTCTTTCAAGGCCCAAGA 59.238 50.000 0.00 0.00 0.00 3.02
672 674 1.160137 CGTCTTTCAAGGCCCAAGAG 58.840 55.000 0.00 0.00 0.00 2.85
673 675 1.543429 CGTCTTTCAAGGCCCAAGAGT 60.543 52.381 0.00 0.00 0.00 3.24
674 676 2.289444 CGTCTTTCAAGGCCCAAGAGTA 60.289 50.000 0.00 0.00 0.00 2.59
675 677 3.339141 GTCTTTCAAGGCCCAAGAGTAG 58.661 50.000 0.00 0.00 0.00 2.57
676 678 3.008049 GTCTTTCAAGGCCCAAGAGTAGA 59.992 47.826 0.00 0.00 0.00 2.59
677 679 3.846588 TCTTTCAAGGCCCAAGAGTAGAT 59.153 43.478 0.00 0.00 0.00 1.98
678 680 5.030147 TCTTTCAAGGCCCAAGAGTAGATA 58.970 41.667 0.00 0.00 0.00 1.98
679 681 5.667626 TCTTTCAAGGCCCAAGAGTAGATAT 59.332 40.000 0.00 0.00 0.00 1.63
680 682 6.844388 TCTTTCAAGGCCCAAGAGTAGATATA 59.156 38.462 0.00 0.00 0.00 0.86
681 683 6.420913 TTCAAGGCCCAAGAGTAGATATAC 57.579 41.667 0.00 0.00 0.00 1.47
682 684 5.716979 TCAAGGCCCAAGAGTAGATATACT 58.283 41.667 0.00 0.00 0.00 2.12
683 685 6.860034 TCAAGGCCCAAGAGTAGATATACTA 58.140 40.000 0.00 0.00 0.00 1.82
684 686 7.479579 TCAAGGCCCAAGAGTAGATATACTAT 58.520 38.462 0.00 0.00 33.39 2.12
685 687 8.621073 TCAAGGCCCAAGAGTAGATATACTATA 58.379 37.037 0.00 0.00 33.39 1.31
686 688 9.427821 CAAGGCCCAAGAGTAGATATACTATAT 57.572 37.037 0.00 0.00 33.39 0.86
709 711 4.706035 AGAAATTCTCATGAGCTAGCTGG 58.294 43.478 24.99 11.63 0.00 4.85
710 712 3.488778 AATTCTCATGAGCTAGCTGGG 57.511 47.619 24.99 9.23 0.00 4.45
711 713 0.467384 TTCTCATGAGCTAGCTGGGC 59.533 55.000 24.99 8.63 0.00 5.36
712 714 1.300775 CTCATGAGCTAGCTGGGCG 60.301 63.158 24.99 7.84 34.52 6.13
713 715 2.280660 CATGAGCTAGCTGGGCGG 60.281 66.667 24.99 2.92 34.52 6.13
714 716 3.554342 ATGAGCTAGCTGGGCGGG 61.554 66.667 24.99 0.00 34.52 6.13
719 721 3.241530 CTAGCTGGGCGGGCCATA 61.242 66.667 24.64 13.36 37.98 2.74
720 722 3.241530 TAGCTGGGCGGGCCATAG 61.242 66.667 24.64 14.41 37.98 2.23
723 725 4.275508 CTGGGCGGGCCATAGCAT 62.276 66.667 24.64 0.00 42.56 3.79
724 726 4.584518 TGGGCGGGCCATAGCATG 62.585 66.667 20.63 0.00 42.56 4.06
732 734 3.860681 CCATAGCATGGGTTGGCC 58.139 61.111 0.00 0.00 46.86 5.36
742 744 4.213666 GGTTGGCCCTAACGTAGC 57.786 61.111 0.00 0.00 0.00 3.58
743 745 1.600638 GGTTGGCCCTAACGTAGCT 59.399 57.895 0.00 0.00 0.00 3.32
744 746 0.461516 GGTTGGCCCTAACGTAGCTC 60.462 60.000 0.00 0.00 0.00 4.09
745 747 0.461516 GTTGGCCCTAACGTAGCTCC 60.462 60.000 0.00 0.00 0.00 4.70
746 748 1.952102 TTGGCCCTAACGTAGCTCCG 61.952 60.000 0.00 0.00 0.00 4.63
747 749 2.279318 GCCCTAACGTAGCTCCGC 60.279 66.667 0.00 0.00 0.00 5.54
748 750 2.416260 CCCTAACGTAGCTCCGCC 59.584 66.667 0.00 0.00 0.00 6.13
749 751 2.416260 CCTAACGTAGCTCCGCCC 59.584 66.667 0.00 0.00 0.00 6.13
750 752 2.416260 CTAACGTAGCTCCGCCCC 59.584 66.667 0.00 0.00 0.00 5.80
751 753 2.043652 TAACGTAGCTCCGCCCCT 60.044 61.111 0.00 0.00 0.00 4.79
752 754 2.351336 CTAACGTAGCTCCGCCCCTG 62.351 65.000 0.00 0.00 0.00 4.45
755 757 3.851128 GTAGCTCCGCCCCTGGAC 61.851 72.222 0.00 0.00 33.48 4.02
756 758 4.392166 TAGCTCCGCCCCTGGACA 62.392 66.667 0.00 0.00 33.48 4.02
757 759 3.696518 TAGCTCCGCCCCTGGACAT 62.697 63.158 0.00 0.00 33.48 3.06
758 760 4.554036 GCTCCGCCCCTGGACATC 62.554 72.222 0.00 0.00 33.48 3.06
759 761 4.227134 CTCCGCCCCTGGACATCG 62.227 72.222 0.00 0.00 33.48 3.84
766 768 4.457496 CCTGGACATCGCGCCACT 62.457 66.667 0.00 0.00 0.00 4.00
767 769 3.190849 CTGGACATCGCGCCACTG 61.191 66.667 0.00 0.00 0.00 3.66
768 770 3.939837 CTGGACATCGCGCCACTGT 62.940 63.158 0.00 2.29 0.00 3.55
769 771 2.742372 GGACATCGCGCCACTGTT 60.742 61.111 0.00 0.00 0.00 3.16
770 772 2.476051 GACATCGCGCCACTGTTG 59.524 61.111 0.00 0.00 0.00 3.33
771 773 2.280797 ACATCGCGCCACTGTTGT 60.281 55.556 0.00 0.00 0.00 3.32
772 774 1.841663 GACATCGCGCCACTGTTGTT 61.842 55.000 0.00 0.00 0.00 2.83
773 775 1.282570 CATCGCGCCACTGTTGTTT 59.717 52.632 0.00 0.00 0.00 2.83
774 776 0.317770 CATCGCGCCACTGTTGTTTT 60.318 50.000 0.00 0.00 0.00 2.43
775 777 0.317770 ATCGCGCCACTGTTGTTTTG 60.318 50.000 0.00 0.00 0.00 2.44
776 778 1.943693 CGCGCCACTGTTGTTTTGG 60.944 57.895 0.00 0.00 0.00 3.28
777 779 1.435515 GCGCCACTGTTGTTTTGGA 59.564 52.632 0.00 0.00 31.39 3.53
778 780 0.179124 GCGCCACTGTTGTTTTGGAA 60.179 50.000 0.00 0.00 31.39 3.53
779 781 1.838913 CGCCACTGTTGTTTTGGAAG 58.161 50.000 0.00 0.00 31.39 3.46
780 782 1.403679 CGCCACTGTTGTTTTGGAAGA 59.596 47.619 0.00 0.00 31.39 2.87
781 783 2.034558 CGCCACTGTTGTTTTGGAAGAT 59.965 45.455 0.00 0.00 31.39 2.40
782 784 3.490761 CGCCACTGTTGTTTTGGAAGATT 60.491 43.478 0.00 0.00 31.39 2.40
783 785 4.261405 CGCCACTGTTGTTTTGGAAGATTA 60.261 41.667 0.00 0.00 31.39 1.75
784 786 4.982295 GCCACTGTTGTTTTGGAAGATTAC 59.018 41.667 0.00 0.00 31.39 1.89
785 787 5.451242 GCCACTGTTGTTTTGGAAGATTACA 60.451 40.000 0.00 0.00 31.39 2.41
786 788 6.738453 GCCACTGTTGTTTTGGAAGATTACAT 60.738 38.462 0.00 0.00 31.39 2.29
787 789 6.863126 CCACTGTTGTTTTGGAAGATTACATC 59.137 38.462 0.00 0.00 31.39 3.06
788 790 7.255590 CCACTGTTGTTTTGGAAGATTACATCT 60.256 37.037 0.00 0.00 42.61 2.90
789 791 7.592533 CACTGTTGTTTTGGAAGATTACATCTG 59.407 37.037 0.00 0.00 40.13 2.90
790 792 7.502226 ACTGTTGTTTTGGAAGATTACATCTGA 59.498 33.333 0.00 0.00 40.13 3.27
806 808 3.066814 GACTGTCCCCTACGGCGT 61.067 66.667 19.64 19.64 38.09 5.68
1073 1089 1.664321 CTGCTTGCCAGGCTGAATCC 61.664 60.000 17.94 1.76 37.93 3.01
1094 1110 1.378778 AGGAGGAGGAAGACGACGG 60.379 63.158 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.997172 TCATCAAGATATAGGATAGGTACACAT 57.003 33.333 0.00 0.00 0.00 3.21
1 2 9.244292 GTCATCAAGATATAGGATAGGTACACA 57.756 37.037 0.00 0.00 0.00 3.72
2 3 9.244292 TGTCATCAAGATATAGGATAGGTACAC 57.756 37.037 0.00 0.00 0.00 2.90
3 4 9.244292 GTGTCATCAAGATATAGGATAGGTACA 57.756 37.037 0.00 0.00 0.00 2.90
4 5 9.244292 TGTGTCATCAAGATATAGGATAGGTAC 57.756 37.037 0.00 0.00 0.00 3.34
46 48 6.429385 TGAAAACTTTTTGTTGTGCCATCTTT 59.571 30.769 0.00 0.00 39.13 2.52
53 55 5.996219 AGGTTTGAAAACTTTTTGTTGTGC 58.004 33.333 5.93 0.00 39.13 4.57
59 61 6.510960 CGGGCATAAGGTTTGAAAACTTTTTG 60.511 38.462 14.01 12.57 38.80 2.44
63 65 3.554129 GCGGGCATAAGGTTTGAAAACTT 60.554 43.478 13.29 13.29 38.89 2.66
85 87 6.254804 CACATAAATTCAAGTCATGCCATGTG 59.745 38.462 4.31 0.00 35.22 3.21
97 99 9.912634 AAAATGAGGTGTACACATAAATTCAAG 57.087 29.630 26.51 0.00 0.00 3.02
103 105 9.508642 TCACATAAAATGAGGTGTACACATAAA 57.491 29.630 26.51 12.59 32.97 1.40
104 106 8.941977 GTCACATAAAATGAGGTGTACACATAA 58.058 33.333 26.51 14.50 32.97 1.90
105 107 8.097662 TGTCACATAAAATGAGGTGTACACATA 58.902 33.333 26.51 12.68 32.97 2.29
106 108 6.939730 TGTCACATAAAATGAGGTGTACACAT 59.060 34.615 26.51 20.96 32.97 3.21
107 109 6.292150 TGTCACATAAAATGAGGTGTACACA 58.708 36.000 26.51 7.73 32.97 3.72
108 110 6.795098 TGTCACATAAAATGAGGTGTACAC 57.205 37.500 18.01 18.01 32.97 2.90
109 111 7.994425 ATTGTCACATAAAATGAGGTGTACA 57.006 32.000 0.00 0.00 32.97 2.90
162 164 9.691362 GCTTCTTTGTTTTTCCAACTATATTCA 57.309 29.630 0.00 0.00 0.00 2.57
163 165 9.140286 GGCTTCTTTGTTTTTCCAACTATATTC 57.860 33.333 0.00 0.00 0.00 1.75
164 166 8.094548 GGGCTTCTTTGTTTTTCCAACTATATT 58.905 33.333 0.00 0.00 0.00 1.28
165 167 7.234577 TGGGCTTCTTTGTTTTTCCAACTATAT 59.765 33.333 0.00 0.00 0.00 0.86
166 168 6.551601 TGGGCTTCTTTGTTTTTCCAACTATA 59.448 34.615 0.00 0.00 0.00 1.31
167 169 5.365314 TGGGCTTCTTTGTTTTTCCAACTAT 59.635 36.000 0.00 0.00 0.00 2.12
168 170 4.712337 TGGGCTTCTTTGTTTTTCCAACTA 59.288 37.500 0.00 0.00 0.00 2.24
169 171 3.517500 TGGGCTTCTTTGTTTTTCCAACT 59.482 39.130 0.00 0.00 0.00 3.16
170 172 3.621268 GTGGGCTTCTTTGTTTTTCCAAC 59.379 43.478 0.00 0.00 0.00 3.77
171 173 3.517500 AGTGGGCTTCTTTGTTTTTCCAA 59.482 39.130 0.00 0.00 0.00 3.53
172 174 3.103742 AGTGGGCTTCTTTGTTTTTCCA 58.896 40.909 0.00 0.00 0.00 3.53
173 175 3.819564 AGTGGGCTTCTTTGTTTTTCC 57.180 42.857 0.00 0.00 0.00 3.13
174 176 5.902681 ACTTAGTGGGCTTCTTTGTTTTTC 58.097 37.500 0.00 0.00 0.00 2.29
175 177 5.932619 ACTTAGTGGGCTTCTTTGTTTTT 57.067 34.783 0.00 0.00 0.00 1.94
176 178 5.420739 TGAACTTAGTGGGCTTCTTTGTTTT 59.579 36.000 0.00 0.00 0.00 2.43
177 179 4.953579 TGAACTTAGTGGGCTTCTTTGTTT 59.046 37.500 0.00 0.00 0.00 2.83
178 180 4.532834 TGAACTTAGTGGGCTTCTTTGTT 58.467 39.130 0.00 0.00 0.00 2.83
179 181 4.164843 TGAACTTAGTGGGCTTCTTTGT 57.835 40.909 0.00 0.00 0.00 2.83
180 182 4.261614 GGTTGAACTTAGTGGGCTTCTTTG 60.262 45.833 0.00 0.00 0.00 2.77
181 183 3.889538 GGTTGAACTTAGTGGGCTTCTTT 59.110 43.478 0.00 0.00 0.00 2.52
182 184 3.117663 TGGTTGAACTTAGTGGGCTTCTT 60.118 43.478 0.00 0.00 0.00 2.52
183 185 2.441750 TGGTTGAACTTAGTGGGCTTCT 59.558 45.455 0.00 0.00 0.00 2.85
184 186 2.858745 TGGTTGAACTTAGTGGGCTTC 58.141 47.619 0.00 0.00 0.00 3.86
185 187 3.525800 ATGGTTGAACTTAGTGGGCTT 57.474 42.857 0.00 0.00 0.00 4.35
186 188 4.862641 ATATGGTTGAACTTAGTGGGCT 57.137 40.909 0.00 0.00 0.00 5.19
187 189 4.097892 CCAATATGGTTGAACTTAGTGGGC 59.902 45.833 13.58 0.00 34.50 5.36
188 190 5.505780 TCCAATATGGTTGAACTTAGTGGG 58.494 41.667 18.09 6.43 39.03 4.61
189 191 7.461182 TTTCCAATATGGTTGAACTTAGTGG 57.539 36.000 14.59 14.59 39.03 4.00
192 194 9.736023 GCTAATTTCCAATATGGTTGAACTTAG 57.264 33.333 0.00 0.00 39.03 2.18
193 195 9.474313 AGCTAATTTCCAATATGGTTGAACTTA 57.526 29.630 0.00 0.00 39.03 2.24
194 196 8.366359 AGCTAATTTCCAATATGGTTGAACTT 57.634 30.769 0.00 0.00 39.03 2.66
195 197 7.836183 AGAGCTAATTTCCAATATGGTTGAACT 59.164 33.333 0.00 0.00 39.03 3.01
196 198 8.000780 AGAGCTAATTTCCAATATGGTTGAAC 57.999 34.615 0.00 0.00 39.03 3.18
197 199 9.342308 CTAGAGCTAATTTCCAATATGGTTGAA 57.658 33.333 0.00 0.00 39.03 2.69
198 200 7.445402 GCTAGAGCTAATTTCCAATATGGTTGA 59.555 37.037 0.00 0.00 37.12 3.18
199 201 7.588512 GCTAGAGCTAATTTCCAATATGGTTG 58.411 38.462 0.00 0.00 37.12 3.77
200 202 7.751768 GCTAGAGCTAATTTCCAATATGGTT 57.248 36.000 0.00 0.00 37.12 3.67
249 251 9.520515 AGGAATGTAACAATGTCTGTAAAGAAT 57.479 29.630 0.00 0.00 37.23 2.40
250 252 8.918202 AGGAATGTAACAATGTCTGTAAAGAA 57.082 30.769 0.00 0.00 37.23 2.52
251 253 8.918202 AAGGAATGTAACAATGTCTGTAAAGA 57.082 30.769 0.00 0.00 37.23 2.52
252 254 9.965824 AAAAGGAATGTAACAATGTCTGTAAAG 57.034 29.630 0.00 0.00 37.23 1.85
277 279 7.439056 AGTTACGAAGGTTGAAGACGATAAAAA 59.561 33.333 0.00 0.00 0.00 1.94
278 280 6.925165 AGTTACGAAGGTTGAAGACGATAAAA 59.075 34.615 0.00 0.00 0.00 1.52
279 281 6.449698 AGTTACGAAGGTTGAAGACGATAAA 58.550 36.000 0.00 0.00 0.00 1.40
280 282 6.017400 AGTTACGAAGGTTGAAGACGATAA 57.983 37.500 0.00 0.00 0.00 1.75
281 283 5.633830 AGTTACGAAGGTTGAAGACGATA 57.366 39.130 0.00 0.00 0.00 2.92
282 284 4.516365 AGTTACGAAGGTTGAAGACGAT 57.484 40.909 0.00 0.00 0.00 3.73
283 285 3.996150 AGTTACGAAGGTTGAAGACGA 57.004 42.857 0.00 0.00 0.00 4.20
284 286 6.364165 TCAATTAGTTACGAAGGTTGAAGACG 59.636 38.462 0.00 0.00 0.00 4.18
285 287 7.647907 TCAATTAGTTACGAAGGTTGAAGAC 57.352 36.000 0.00 0.00 0.00 3.01
286 288 7.711772 TGTTCAATTAGTTACGAAGGTTGAAGA 59.288 33.333 7.05 4.51 35.53 2.87
287 289 7.797123 GTGTTCAATTAGTTACGAAGGTTGAAG 59.203 37.037 7.05 0.00 35.53 3.02
288 290 7.254863 GGTGTTCAATTAGTTACGAAGGTTGAA 60.255 37.037 0.00 3.91 33.30 2.69
289 291 6.203338 GGTGTTCAATTAGTTACGAAGGTTGA 59.797 38.462 0.00 0.00 0.00 3.18
290 292 6.017770 TGGTGTTCAATTAGTTACGAAGGTTG 60.018 38.462 0.00 0.00 0.00 3.77
291 293 6.017687 GTGGTGTTCAATTAGTTACGAAGGTT 60.018 38.462 0.00 0.00 0.00 3.50
292 294 5.467735 GTGGTGTTCAATTAGTTACGAAGGT 59.532 40.000 0.00 0.00 0.00 3.50
293 295 5.106830 GGTGGTGTTCAATTAGTTACGAAGG 60.107 44.000 0.00 0.00 0.00 3.46
294 296 5.467399 TGGTGGTGTTCAATTAGTTACGAAG 59.533 40.000 0.00 0.00 0.00 3.79
295 297 5.236911 GTGGTGGTGTTCAATTAGTTACGAA 59.763 40.000 0.00 0.00 0.00 3.85
296 298 4.751098 GTGGTGGTGTTCAATTAGTTACGA 59.249 41.667 0.00 0.00 0.00 3.43
297 299 4.512198 TGTGGTGGTGTTCAATTAGTTACG 59.488 41.667 0.00 0.00 0.00 3.18
298 300 6.205853 TGATGTGGTGGTGTTCAATTAGTTAC 59.794 38.462 0.00 0.00 0.00 2.50
299 301 6.299922 TGATGTGGTGGTGTTCAATTAGTTA 58.700 36.000 0.00 0.00 0.00 2.24
300 302 5.136828 TGATGTGGTGGTGTTCAATTAGTT 58.863 37.500 0.00 0.00 0.00 2.24
301 303 4.724399 TGATGTGGTGGTGTTCAATTAGT 58.276 39.130 0.00 0.00 0.00 2.24
302 304 5.703978 TTGATGTGGTGGTGTTCAATTAG 57.296 39.130 0.00 0.00 0.00 1.73
303 305 7.953005 ATATTGATGTGGTGGTGTTCAATTA 57.047 32.000 2.23 0.00 37.92 1.40
304 306 6.855763 ATATTGATGTGGTGGTGTTCAATT 57.144 33.333 2.23 0.00 37.92 2.32
305 307 8.537728 AATATATTGATGTGGTGGTGTTCAAT 57.462 30.769 0.00 0.00 39.58 2.57
306 308 7.953005 AATATATTGATGTGGTGGTGTTCAA 57.047 32.000 0.00 0.00 0.00 2.69
307 309 7.953005 AAATATATTGATGTGGTGGTGTTCA 57.047 32.000 0.00 0.00 0.00 3.18
308 310 9.086336 CAAAAATATATTGATGTGGTGGTGTTC 57.914 33.333 0.00 0.00 0.00 3.18
309 311 8.040132 CCAAAAATATATTGATGTGGTGGTGTT 58.960 33.333 0.00 0.00 0.00 3.32
310 312 7.398618 TCCAAAAATATATTGATGTGGTGGTGT 59.601 33.333 0.00 0.00 0.00 4.16
311 313 7.780064 TCCAAAAATATATTGATGTGGTGGTG 58.220 34.615 0.00 0.00 0.00 4.17
312 314 7.969690 TCCAAAAATATATTGATGTGGTGGT 57.030 32.000 0.00 0.00 0.00 4.16
313 315 9.664332 TTTTCCAAAAATATATTGATGTGGTGG 57.336 29.630 0.00 0.48 0.00 4.61
327 329 9.287373 AGTCACGGTATAGTTTTTCCAAAAATA 57.713 29.630 0.71 0.00 39.75 1.40
328 330 8.079809 CAGTCACGGTATAGTTTTTCCAAAAAT 58.920 33.333 0.71 0.00 39.75 1.82
329 331 7.067251 ACAGTCACGGTATAGTTTTTCCAAAAA 59.933 33.333 0.00 0.00 35.67 1.94
330 332 6.543100 ACAGTCACGGTATAGTTTTTCCAAAA 59.457 34.615 0.00 0.00 0.00 2.44
331 333 6.056884 ACAGTCACGGTATAGTTTTTCCAAA 58.943 36.000 0.00 0.00 0.00 3.28
332 334 5.613329 ACAGTCACGGTATAGTTTTTCCAA 58.387 37.500 0.00 0.00 0.00 3.53
333 335 5.217978 ACAGTCACGGTATAGTTTTTCCA 57.782 39.130 0.00 0.00 0.00 3.53
334 336 5.164022 CGAACAGTCACGGTATAGTTTTTCC 60.164 44.000 0.00 0.00 0.00 3.13
335 337 5.630680 TCGAACAGTCACGGTATAGTTTTTC 59.369 40.000 0.00 0.00 0.00 2.29
336 338 5.531634 TCGAACAGTCACGGTATAGTTTTT 58.468 37.500 0.00 0.00 0.00 1.94
337 339 5.125100 TCGAACAGTCACGGTATAGTTTT 57.875 39.130 0.00 0.00 0.00 2.43
338 340 4.771590 TCGAACAGTCACGGTATAGTTT 57.228 40.909 0.00 0.00 0.00 2.66
339 341 4.380233 CCTTCGAACAGTCACGGTATAGTT 60.380 45.833 0.00 0.00 0.00 2.24
340 342 3.128242 CCTTCGAACAGTCACGGTATAGT 59.872 47.826 0.00 0.00 0.00 2.12
341 343 3.128242 ACCTTCGAACAGTCACGGTATAG 59.872 47.826 0.00 0.00 0.00 1.31
342 344 3.084039 ACCTTCGAACAGTCACGGTATA 58.916 45.455 0.00 0.00 0.00 1.47
343 345 1.891150 ACCTTCGAACAGTCACGGTAT 59.109 47.619 0.00 0.00 0.00 2.73
344 346 1.321474 ACCTTCGAACAGTCACGGTA 58.679 50.000 0.00 0.00 0.00 4.02
345 347 1.321474 TACCTTCGAACAGTCACGGT 58.679 50.000 7.94 7.94 0.00 4.83
346 348 2.649331 ATACCTTCGAACAGTCACGG 57.351 50.000 0.00 0.00 0.00 4.94
347 349 3.834610 AGAATACCTTCGAACAGTCACG 58.165 45.455 0.00 0.00 36.45 4.35
348 350 4.174762 GGAGAATACCTTCGAACAGTCAC 58.825 47.826 0.00 0.00 36.45 3.67
349 351 3.194968 GGGAGAATACCTTCGAACAGTCA 59.805 47.826 0.00 0.00 36.45 3.41
350 352 3.194968 TGGGAGAATACCTTCGAACAGTC 59.805 47.826 0.00 0.00 36.45 3.51
351 353 3.056035 GTGGGAGAATACCTTCGAACAGT 60.056 47.826 0.00 0.00 36.45 3.55
352 354 3.522553 GTGGGAGAATACCTTCGAACAG 58.477 50.000 0.00 0.00 36.45 3.16
353 355 2.235402 GGTGGGAGAATACCTTCGAACA 59.765 50.000 0.00 0.00 36.45 3.18
354 356 2.737679 CGGTGGGAGAATACCTTCGAAC 60.738 54.545 0.00 0.00 36.45 3.95
355 357 1.479323 CGGTGGGAGAATACCTTCGAA 59.521 52.381 0.00 0.00 36.45 3.71
356 358 1.108776 CGGTGGGAGAATACCTTCGA 58.891 55.000 0.00 0.00 36.45 3.71
357 359 0.822164 ACGGTGGGAGAATACCTTCG 59.178 55.000 0.00 0.00 36.45 3.79
358 360 1.829222 TCACGGTGGGAGAATACCTTC 59.171 52.381 8.50 0.00 34.77 3.46
359 361 1.553704 GTCACGGTGGGAGAATACCTT 59.446 52.381 8.50 0.00 34.77 3.50
360 362 1.192428 GTCACGGTGGGAGAATACCT 58.808 55.000 8.50 0.00 34.77 3.08
361 363 1.136500 GAGTCACGGTGGGAGAATACC 59.864 57.143 8.50 0.00 0.00 2.73
362 364 1.202268 CGAGTCACGGTGGGAGAATAC 60.202 57.143 8.50 0.00 38.46 1.89
363 365 1.100510 CGAGTCACGGTGGGAGAATA 58.899 55.000 8.50 0.00 38.46 1.75
364 366 1.890894 CGAGTCACGGTGGGAGAAT 59.109 57.895 8.50 0.00 38.46 2.40
365 367 3.362262 CGAGTCACGGTGGGAGAA 58.638 61.111 8.50 0.00 38.46 2.87
374 376 2.631418 ATGACAGTAACCGAGTCACG 57.369 50.000 0.00 0.00 44.15 4.35
375 377 3.251571 GGAATGACAGTAACCGAGTCAC 58.748 50.000 0.00 0.00 44.15 3.67
376 378 2.894765 TGGAATGACAGTAACCGAGTCA 59.105 45.455 0.00 0.00 45.26 3.41
377 379 3.251571 GTGGAATGACAGTAACCGAGTC 58.748 50.000 0.00 0.00 0.00 3.36
378 380 2.028385 GGTGGAATGACAGTAACCGAGT 60.028 50.000 0.00 0.00 0.00 4.18
379 381 2.618053 GGTGGAATGACAGTAACCGAG 58.382 52.381 0.00 0.00 0.00 4.63
380 382 2.754946 GGTGGAATGACAGTAACCGA 57.245 50.000 0.00 0.00 0.00 4.69
381 383 1.355971 CGGTGGAATGACAGTAACCG 58.644 55.000 13.24 13.24 43.83 4.44
382 384 2.344025 GTCGGTGGAATGACAGTAACC 58.656 52.381 0.00 0.00 35.20 2.85
383 385 2.344025 GGTCGGTGGAATGACAGTAAC 58.656 52.381 0.00 0.00 36.83 2.50
384 386 1.067425 CGGTCGGTGGAATGACAGTAA 60.067 52.381 0.00 0.00 36.83 2.24
385 387 0.528924 CGGTCGGTGGAATGACAGTA 59.471 55.000 0.00 0.00 36.83 2.74
386 388 1.292223 CGGTCGGTGGAATGACAGT 59.708 57.895 0.00 0.00 36.83 3.55
387 389 2.100631 GCGGTCGGTGGAATGACAG 61.101 63.158 0.00 0.00 36.83 3.51
388 390 2.047655 GCGGTCGGTGGAATGACA 60.048 61.111 0.00 0.00 36.83 3.58
389 391 2.047655 TGCGGTCGGTGGAATGAC 60.048 61.111 0.00 0.00 0.00 3.06
390 392 2.047655 GTGCGGTCGGTGGAATGA 60.048 61.111 0.00 0.00 0.00 2.57
391 393 1.705337 GATGTGCGGTCGGTGGAATG 61.705 60.000 0.00 0.00 0.00 2.67
392 394 1.449601 GATGTGCGGTCGGTGGAAT 60.450 57.895 0.00 0.00 0.00 3.01
393 395 2.047655 GATGTGCGGTCGGTGGAA 60.048 61.111 0.00 0.00 0.00 3.53
394 396 4.077184 GGATGTGCGGTCGGTGGA 62.077 66.667 0.00 0.00 0.00 4.02
395 397 3.680620 ATGGATGTGCGGTCGGTGG 62.681 63.158 0.00 0.00 0.00 4.61
396 398 2.125147 ATGGATGTGCGGTCGGTG 60.125 61.111 0.00 0.00 0.00 4.94
397 399 1.971505 ATCATGGATGTGCGGTCGGT 61.972 55.000 0.00 0.00 0.00 4.69
398 400 0.033366 TATCATGGATGTGCGGTCGG 59.967 55.000 0.00 0.00 0.00 4.79
399 401 1.139989 GTATCATGGATGTGCGGTCG 58.860 55.000 0.00 0.00 0.00 4.79
400 402 2.238942 TGTATCATGGATGTGCGGTC 57.761 50.000 0.00 0.00 0.00 4.79
401 403 2.936919 ATGTATCATGGATGTGCGGT 57.063 45.000 0.00 0.00 0.00 5.68
402 404 3.125829 GCTAATGTATCATGGATGTGCGG 59.874 47.826 0.00 0.00 0.00 5.69
403 405 3.999001 AGCTAATGTATCATGGATGTGCG 59.001 43.478 0.00 0.00 0.00 5.34
404 406 4.999311 TGAGCTAATGTATCATGGATGTGC 59.001 41.667 0.00 0.00 0.00 4.57
405 407 7.073342 CATGAGCTAATGTATCATGGATGTG 57.927 40.000 2.45 0.00 44.20 3.21
412 414 4.687948 GCGTGACATGAGCTAATGTATCAT 59.312 41.667 17.14 0.00 40.87 2.45
413 415 4.051237 GCGTGACATGAGCTAATGTATCA 58.949 43.478 17.14 8.97 40.87 2.15
414 416 4.051237 TGCGTGACATGAGCTAATGTATC 58.949 43.478 17.14 11.49 40.87 2.24
415 417 4.058721 TGCGTGACATGAGCTAATGTAT 57.941 40.909 17.14 0.00 40.87 2.29
416 418 3.518634 TGCGTGACATGAGCTAATGTA 57.481 42.857 17.14 3.26 40.87 2.29
417 419 2.385013 TGCGTGACATGAGCTAATGT 57.615 45.000 17.13 17.13 43.47 2.71
418 420 3.745332 TTTGCGTGACATGAGCTAATG 57.255 42.857 9.75 9.75 0.00 1.90
419 421 4.970662 ATTTTGCGTGACATGAGCTAAT 57.029 36.364 0.00 0.00 0.00 1.73
420 422 4.023279 ACAATTTTGCGTGACATGAGCTAA 60.023 37.500 0.00 0.08 0.00 3.09
421 423 3.501828 ACAATTTTGCGTGACATGAGCTA 59.498 39.130 0.00 0.00 0.00 3.32
422 424 2.294233 ACAATTTTGCGTGACATGAGCT 59.706 40.909 0.00 0.00 0.00 4.09
423 425 2.664916 ACAATTTTGCGTGACATGAGC 58.335 42.857 0.00 0.00 0.00 4.26
424 426 3.121261 GCAACAATTTTGCGTGACATGAG 60.121 43.478 0.00 0.00 35.58 2.90
425 427 2.793790 GCAACAATTTTGCGTGACATGA 59.206 40.909 0.00 0.00 35.58 3.07
426 428 3.158103 GCAACAATTTTGCGTGACATG 57.842 42.857 8.79 0.00 35.58 3.21
434 436 1.794116 ACGATGCAGCAACAATTTTGC 59.206 42.857 1.53 13.93 45.22 3.68
435 437 5.345472 TCAATACGATGCAGCAACAATTTTG 59.655 36.000 1.53 0.34 0.00 2.44
436 438 5.468592 TCAATACGATGCAGCAACAATTTT 58.531 33.333 1.53 0.00 0.00 1.82
437 439 5.058149 TCAATACGATGCAGCAACAATTT 57.942 34.783 1.53 0.00 0.00 1.82
438 440 4.700268 TCAATACGATGCAGCAACAATT 57.300 36.364 1.53 0.00 0.00 2.32
439 441 4.906065 ATCAATACGATGCAGCAACAAT 57.094 36.364 1.53 0.00 31.20 2.71
440 442 4.700268 AATCAATACGATGCAGCAACAA 57.300 36.364 1.53 0.00 33.40 2.83
441 443 4.155644 TGAAATCAATACGATGCAGCAACA 59.844 37.500 1.53 0.00 33.40 3.33
442 444 4.496895 GTGAAATCAATACGATGCAGCAAC 59.503 41.667 1.53 0.00 33.40 4.17
443 445 4.155644 TGTGAAATCAATACGATGCAGCAA 59.844 37.500 1.53 0.00 33.40 3.91
444 446 3.688673 TGTGAAATCAATACGATGCAGCA 59.311 39.130 1.53 0.00 33.40 4.41
445 447 4.277257 TGTGAAATCAATACGATGCAGC 57.723 40.909 0.00 0.00 33.40 5.25
446 448 7.182361 AGTATGTGAAATCAATACGATGCAG 57.818 36.000 0.00 0.00 33.40 4.41
447 449 7.552458 AAGTATGTGAAATCAATACGATGCA 57.448 32.000 0.00 0.00 33.40 3.96
448 450 8.841444 AAAAGTATGTGAAATCAATACGATGC 57.159 30.769 0.00 0.00 33.40 3.91
490 492 9.247861 GGATATTCCAAAGCATATTTAGGTCAT 57.752 33.333 0.00 0.00 36.28 3.06
491 493 8.224025 TGGATATTCCAAAGCATATTTAGGTCA 58.776 33.333 0.00 0.00 45.00 4.02
492 494 8.635765 TGGATATTCCAAAGCATATTTAGGTC 57.364 34.615 0.00 0.00 45.00 3.85
523 525 3.562557 ACGAATGGTGGTAAGTGTGAAAC 59.437 43.478 0.00 0.00 37.35 2.78
524 526 3.811083 ACGAATGGTGGTAAGTGTGAAA 58.189 40.909 0.00 0.00 0.00 2.69
525 527 3.478857 ACGAATGGTGGTAAGTGTGAA 57.521 42.857 0.00 0.00 0.00 3.18
526 528 3.575256 AGTACGAATGGTGGTAAGTGTGA 59.425 43.478 0.00 0.00 0.00 3.58
527 529 3.921677 AGTACGAATGGTGGTAAGTGTG 58.078 45.455 0.00 0.00 0.00 3.82
528 530 3.056322 GGAGTACGAATGGTGGTAAGTGT 60.056 47.826 0.00 0.00 0.00 3.55
529 531 3.194968 AGGAGTACGAATGGTGGTAAGTG 59.805 47.826 0.00 0.00 0.00 3.16
530 532 3.194968 CAGGAGTACGAATGGTGGTAAGT 59.805 47.826 0.00 0.00 0.00 2.24
531 533 3.194968 ACAGGAGTACGAATGGTGGTAAG 59.805 47.826 0.00 0.00 0.00 2.34
532 534 3.167485 ACAGGAGTACGAATGGTGGTAA 58.833 45.455 0.00 0.00 0.00 2.85
533 535 2.756760 GACAGGAGTACGAATGGTGGTA 59.243 50.000 0.00 0.00 0.00 3.25
534 536 1.549170 GACAGGAGTACGAATGGTGGT 59.451 52.381 0.00 0.00 0.00 4.16
535 537 1.469251 CGACAGGAGTACGAATGGTGG 60.469 57.143 0.00 0.00 0.00 4.61
536 538 1.471287 TCGACAGGAGTACGAATGGTG 59.529 52.381 0.00 0.00 33.20 4.17
537 539 1.830279 TCGACAGGAGTACGAATGGT 58.170 50.000 0.00 0.00 33.20 3.55
538 540 2.357952 TCATCGACAGGAGTACGAATGG 59.642 50.000 0.00 0.00 39.38 3.16
539 541 3.692791 TCATCGACAGGAGTACGAATG 57.307 47.619 0.00 0.00 39.38 2.67
540 542 4.138290 AGATCATCGACAGGAGTACGAAT 58.862 43.478 0.00 0.00 39.38 3.34
541 543 3.542648 AGATCATCGACAGGAGTACGAA 58.457 45.455 0.00 0.00 39.38 3.85
542 544 3.195471 AGATCATCGACAGGAGTACGA 57.805 47.619 0.00 0.00 40.18 3.43
543 545 3.808174 TGTAGATCATCGACAGGAGTACG 59.192 47.826 0.00 0.00 28.86 3.67
544 546 5.933790 GATGTAGATCATCGACAGGAGTAC 58.066 45.833 6.74 0.00 42.57 2.73
565 567 2.882761 CTGGGCGTCATCATCATTTGAT 59.117 45.455 0.00 0.00 46.27 2.57
566 568 2.291365 CTGGGCGTCATCATCATTTGA 58.709 47.619 0.00 0.00 39.12 2.69
567 569 2.019249 ACTGGGCGTCATCATCATTTG 58.981 47.619 0.00 0.00 0.00 2.32
568 570 2.019249 CACTGGGCGTCATCATCATTT 58.981 47.619 0.00 0.00 0.00 2.32
569 571 1.671979 CACTGGGCGTCATCATCATT 58.328 50.000 0.00 0.00 0.00 2.57
570 572 0.179037 CCACTGGGCGTCATCATCAT 60.179 55.000 0.00 0.00 0.00 2.45
571 573 1.221566 CCACTGGGCGTCATCATCA 59.778 57.895 0.00 0.00 0.00 3.07
572 574 4.131376 CCACTGGGCGTCATCATC 57.869 61.111 0.00 0.00 0.00 2.92
582 584 3.965539 CTCAAGCTCCGCCACTGGG 62.966 68.421 0.00 0.00 37.18 4.45
583 585 2.435586 CTCAAGCTCCGCCACTGG 60.436 66.667 0.00 0.00 0.00 4.00
584 586 1.739562 GTCTCAAGCTCCGCCACTG 60.740 63.158 0.00 0.00 0.00 3.66
585 587 2.659610 GTCTCAAGCTCCGCCACT 59.340 61.111 0.00 0.00 0.00 4.00
586 588 2.435059 GGTCTCAAGCTCCGCCAC 60.435 66.667 0.00 0.00 0.00 5.01
587 589 2.293318 ATGGTCTCAAGCTCCGCCA 61.293 57.895 0.00 0.00 0.00 5.69
588 590 1.817099 CATGGTCTCAAGCTCCGCC 60.817 63.158 0.00 0.00 0.00 6.13
589 591 0.674895 AACATGGTCTCAAGCTCCGC 60.675 55.000 0.00 0.00 0.00 5.54
590 592 1.081892 CAACATGGTCTCAAGCTCCG 58.918 55.000 0.00 0.00 0.00 4.63
591 593 1.457346 CCAACATGGTCTCAAGCTCC 58.543 55.000 0.00 0.00 31.35 4.70
592 594 1.457346 CCCAACATGGTCTCAAGCTC 58.543 55.000 0.00 0.00 35.17 4.09
593 595 0.610232 GCCCAACATGGTCTCAAGCT 60.610 55.000 0.00 0.00 35.17 3.74
594 596 1.885871 GCCCAACATGGTCTCAAGC 59.114 57.895 0.00 0.00 35.17 4.01
595 597 1.308069 CCGCCCAACATGGTCTCAAG 61.308 60.000 0.00 0.00 35.17 3.02
596 598 1.303236 CCGCCCAACATGGTCTCAA 60.303 57.895 0.00 0.00 35.17 3.02
597 599 2.350895 CCGCCCAACATGGTCTCA 59.649 61.111 0.00 0.00 35.17 3.27
598 600 1.745489 GACCGCCCAACATGGTCTC 60.745 63.158 0.00 0.00 46.86 3.36
599 601 2.351276 GACCGCCCAACATGGTCT 59.649 61.111 0.00 0.00 46.86 3.85
601 603 2.034066 CAGACCGCCCAACATGGT 59.966 61.111 0.00 0.00 35.17 3.55
602 604 2.751436 CCAGACCGCCCAACATGG 60.751 66.667 0.00 0.00 37.25 3.66
603 605 2.040544 GTCCAGACCGCCCAACATG 61.041 63.158 0.00 0.00 0.00 3.21
604 606 2.351276 GTCCAGACCGCCCAACAT 59.649 61.111 0.00 0.00 0.00 2.71
605 607 4.308458 CGTCCAGACCGCCCAACA 62.308 66.667 0.00 0.00 0.00 3.33
606 608 3.934391 CTCGTCCAGACCGCCCAAC 62.934 68.421 0.00 0.00 0.00 3.77
607 609 3.691342 CTCGTCCAGACCGCCCAA 61.691 66.667 0.00 0.00 0.00 4.12
611 613 3.858868 TTGTGCTCGTCCAGACCGC 62.859 63.158 0.00 0.00 0.00 5.68
612 614 2.022129 GTTGTGCTCGTCCAGACCG 61.022 63.158 0.00 0.00 0.00 4.79
613 615 0.320771 ATGTTGTGCTCGTCCAGACC 60.321 55.000 0.00 0.00 0.00 3.85
614 616 2.363788 TATGTTGTGCTCGTCCAGAC 57.636 50.000 0.00 0.00 0.00 3.51
615 617 2.353704 CCTTATGTTGTGCTCGTCCAGA 60.354 50.000 0.00 0.00 0.00 3.86
616 618 2.002586 CCTTATGTTGTGCTCGTCCAG 58.997 52.381 0.00 0.00 0.00 3.86
617 619 1.338674 CCCTTATGTTGTGCTCGTCCA 60.339 52.381 0.00 0.00 0.00 4.02
618 620 1.066430 TCCCTTATGTTGTGCTCGTCC 60.066 52.381 0.00 0.00 0.00 4.79
619 621 2.380084 TCCCTTATGTTGTGCTCGTC 57.620 50.000 0.00 0.00 0.00 4.20
620 622 2.851263 TTCCCTTATGTTGTGCTCGT 57.149 45.000 0.00 0.00 0.00 4.18
621 623 3.248602 GCTATTCCCTTATGTTGTGCTCG 59.751 47.826 0.00 0.00 0.00 5.03
622 624 4.455606 AGCTATTCCCTTATGTTGTGCTC 58.544 43.478 0.00 0.00 0.00 4.26
623 625 4.510167 AGCTATTCCCTTATGTTGTGCT 57.490 40.909 0.00 0.00 0.00 4.40
624 626 4.399303 ACAAGCTATTCCCTTATGTTGTGC 59.601 41.667 0.00 0.00 0.00 4.57
625 627 5.163622 CCACAAGCTATTCCCTTATGTTGTG 60.164 44.000 0.00 0.00 41.95 3.33
626 628 4.949856 CCACAAGCTATTCCCTTATGTTGT 59.050 41.667 0.00 0.00 0.00 3.32
627 629 4.339247 CCCACAAGCTATTCCCTTATGTTG 59.661 45.833 0.00 0.00 0.00 3.33
628 630 4.536765 CCCACAAGCTATTCCCTTATGTT 58.463 43.478 0.00 0.00 0.00 2.71
629 631 3.688414 GCCCACAAGCTATTCCCTTATGT 60.688 47.826 0.00 0.00 0.00 2.29
630 632 2.887152 GCCCACAAGCTATTCCCTTATG 59.113 50.000 0.00 0.00 0.00 1.90
631 633 2.785857 AGCCCACAAGCTATTCCCTTAT 59.214 45.455 0.00 0.00 42.70 1.73
632 634 2.172717 GAGCCCACAAGCTATTCCCTTA 59.827 50.000 0.00 0.00 45.15 2.69
633 635 1.002857 AGCCCACAAGCTATTCCCTT 58.997 50.000 0.00 0.00 42.70 3.95
634 636 0.548510 GAGCCCACAAGCTATTCCCT 59.451 55.000 0.00 0.00 45.15 4.20
635 637 0.815615 CGAGCCCACAAGCTATTCCC 60.816 60.000 0.00 0.00 45.15 3.97
636 638 0.107654 ACGAGCCCACAAGCTATTCC 60.108 55.000 0.00 0.00 45.15 3.01
637 639 1.134670 AGACGAGCCCACAAGCTATTC 60.135 52.381 0.00 0.00 45.15 1.75
638 640 0.905357 AGACGAGCCCACAAGCTATT 59.095 50.000 0.00 0.00 45.15 1.73
639 641 0.905357 AAGACGAGCCCACAAGCTAT 59.095 50.000 0.00 0.00 45.15 2.97
640 642 0.685097 AAAGACGAGCCCACAAGCTA 59.315 50.000 0.00 0.00 45.15 3.32
642 644 0.884704 TGAAAGACGAGCCCACAAGC 60.885 55.000 0.00 0.00 0.00 4.01
643 645 1.532868 CTTGAAAGACGAGCCCACAAG 59.467 52.381 0.00 0.00 0.00 3.16
644 646 1.593196 CTTGAAAGACGAGCCCACAA 58.407 50.000 0.00 0.00 0.00 3.33
645 647 0.250295 CCTTGAAAGACGAGCCCACA 60.250 55.000 0.00 0.00 0.00 4.17
646 648 1.578206 GCCTTGAAAGACGAGCCCAC 61.578 60.000 0.00 0.00 0.00 4.61
647 649 1.302511 GCCTTGAAAGACGAGCCCA 60.303 57.895 0.00 0.00 0.00 5.36
648 650 2.041115 GGCCTTGAAAGACGAGCCC 61.041 63.158 0.00 0.00 0.00 5.19
649 651 2.041115 GGGCCTTGAAAGACGAGCC 61.041 63.158 0.84 0.00 0.00 4.70
650 652 0.889186 TTGGGCCTTGAAAGACGAGC 60.889 55.000 4.53 0.00 0.00 5.03
651 653 1.160137 CTTGGGCCTTGAAAGACGAG 58.840 55.000 4.53 0.00 0.00 4.18
652 654 0.762418 TCTTGGGCCTTGAAAGACGA 59.238 50.000 4.53 0.00 0.00 4.20
653 655 1.160137 CTCTTGGGCCTTGAAAGACG 58.840 55.000 4.53 0.00 0.00 4.18
654 656 2.278332 ACTCTTGGGCCTTGAAAGAC 57.722 50.000 4.53 0.00 0.00 3.01
655 657 3.248024 TCTACTCTTGGGCCTTGAAAGA 58.752 45.455 4.53 4.34 0.00 2.52
656 658 3.703001 TCTACTCTTGGGCCTTGAAAG 57.297 47.619 4.53 0.00 0.00 2.62
657 659 5.975988 ATATCTACTCTTGGGCCTTGAAA 57.024 39.130 4.53 0.00 0.00 2.69
658 660 6.143915 AGTATATCTACTCTTGGGCCTTGAA 58.856 40.000 4.53 0.00 32.56 2.69
659 661 5.716979 AGTATATCTACTCTTGGGCCTTGA 58.283 41.667 4.53 1.62 32.56 3.02
660 662 7.726033 ATAGTATATCTACTCTTGGGCCTTG 57.274 40.000 4.53 0.00 39.04 3.61
683 685 8.259411 CCAGCTAGCTCATGAGAATTTCTATAT 58.741 37.037 27.04 6.31 0.00 0.86
684 686 7.310299 CCCAGCTAGCTCATGAGAATTTCTATA 60.310 40.741 27.04 4.48 0.00 1.31
685 687 6.465948 CCAGCTAGCTCATGAGAATTTCTAT 58.534 40.000 27.04 1.31 0.00 1.98
686 688 5.221601 CCCAGCTAGCTCATGAGAATTTCTA 60.222 44.000 27.04 15.33 0.00 2.10
687 689 4.444591 CCCAGCTAGCTCATGAGAATTTCT 60.445 45.833 27.04 15.02 0.00 2.52
688 690 3.814283 CCCAGCTAGCTCATGAGAATTTC 59.186 47.826 27.04 8.03 0.00 2.17
689 691 3.818180 CCCAGCTAGCTCATGAGAATTT 58.182 45.455 27.04 10.33 0.00 1.82
690 692 2.486907 GCCCAGCTAGCTCATGAGAATT 60.487 50.000 27.04 12.76 0.00 2.17
691 693 1.072015 GCCCAGCTAGCTCATGAGAAT 59.928 52.381 27.04 15.64 0.00 2.40
692 694 0.467384 GCCCAGCTAGCTCATGAGAA 59.533 55.000 27.04 12.09 0.00 2.87
693 695 1.742324 CGCCCAGCTAGCTCATGAGA 61.742 60.000 27.04 5.37 0.00 3.27
694 696 1.300775 CGCCCAGCTAGCTCATGAG 60.301 63.158 16.15 18.84 0.00 2.90
695 697 2.800541 CCGCCCAGCTAGCTCATGA 61.801 63.158 16.15 0.00 0.00 3.07
696 698 2.280660 CCGCCCAGCTAGCTCATG 60.281 66.667 16.15 4.68 0.00 3.07
697 699 3.554342 CCCGCCCAGCTAGCTCAT 61.554 66.667 16.15 0.00 0.00 2.90
725 727 0.461516 GAGCTACGTTAGGGCCAACC 60.462 60.000 6.18 0.00 40.67 3.77
726 728 0.461516 GGAGCTACGTTAGGGCCAAC 60.462 60.000 6.18 7.54 0.00 3.77
727 729 1.902556 GGAGCTACGTTAGGGCCAA 59.097 57.895 6.18 0.00 0.00 4.52
728 730 2.420568 CGGAGCTACGTTAGGGCCA 61.421 63.158 11.15 0.00 0.00 5.36
729 731 2.416260 CGGAGCTACGTTAGGGCC 59.584 66.667 11.15 0.00 0.00 5.80
742 744 4.227134 CGATGTCCAGGGGCGGAG 62.227 72.222 0.00 0.00 35.10 4.63
749 751 4.457496 AGTGGCGCGATGTCCAGG 62.457 66.667 12.10 0.00 32.15 4.45
750 752 3.190849 CAGTGGCGCGATGTCCAG 61.191 66.667 12.10 0.00 32.15 3.86
751 753 3.529341 AACAGTGGCGCGATGTCCA 62.529 57.895 12.10 4.21 0.00 4.02
752 754 2.742372 AACAGTGGCGCGATGTCC 60.742 61.111 12.10 0.65 0.00 4.02
753 755 1.841663 AACAACAGTGGCGCGATGTC 61.842 55.000 12.10 0.00 0.00 3.06
754 756 1.444119 AAACAACAGTGGCGCGATGT 61.444 50.000 12.10 5.48 0.00 3.06
755 757 0.317770 AAAACAACAGTGGCGCGATG 60.318 50.000 12.10 4.73 0.00 3.84
756 758 0.317770 CAAAACAACAGTGGCGCGAT 60.318 50.000 12.10 0.00 0.00 4.58
757 759 1.063327 CAAAACAACAGTGGCGCGA 59.937 52.632 12.10 0.00 0.00 5.87
758 760 1.943693 CCAAAACAACAGTGGCGCG 60.944 57.895 0.00 0.00 0.00 6.86
759 761 0.179124 TTCCAAAACAACAGTGGCGC 60.179 50.000 0.00 0.00 32.10 6.53
760 762 1.403679 TCTTCCAAAACAACAGTGGCG 59.596 47.619 0.00 0.00 32.10 5.69
761 763 3.733443 ATCTTCCAAAACAACAGTGGC 57.267 42.857 0.00 0.00 32.10 5.01
762 764 6.142818 TGTAATCTTCCAAAACAACAGTGG 57.857 37.500 0.00 0.00 0.00 4.00
763 765 7.858052 GATGTAATCTTCCAAAACAACAGTG 57.142 36.000 0.00 0.00 41.17 3.66
779 781 4.261656 CGTAGGGGACAGTCAGATGTAATC 60.262 50.000 2.17 0.00 46.04 1.75
780 782 3.637229 CGTAGGGGACAGTCAGATGTAAT 59.363 47.826 2.17 0.00 32.25 1.89
781 783 3.021695 CGTAGGGGACAGTCAGATGTAA 58.978 50.000 2.17 0.00 32.25 2.41
782 784 2.651455 CGTAGGGGACAGTCAGATGTA 58.349 52.381 2.17 0.00 32.25 2.29
783 785 1.475403 CGTAGGGGACAGTCAGATGT 58.525 55.000 2.17 0.00 35.68 3.06
806 808 0.896940 ACGTCGAAACCCTAGGCAGA 60.897 55.000 2.05 0.00 0.00 4.26
985 1000 3.630312 GCCGCCATAAGAAACCAATCTAA 59.370 43.478 0.00 0.00 0.00 2.10
1073 1089 2.046864 TCGTCTTCCTCCTCCTGCG 61.047 63.158 0.00 0.00 0.00 5.18
1094 1110 2.358322 TTCCTCCTCCCACACAAAAC 57.642 50.000 0.00 0.00 0.00 2.43
1635 2169 5.724328 CAGTTATAGCAGAACACTGGAAGA 58.276 41.667 0.00 0.00 37.43 2.87
1769 2304 2.376518 TGAGTGCCAAATCCTCCTCTTT 59.623 45.455 0.00 0.00 0.00 2.52
1878 2413 1.457346 GATGGACTTCCTGCTGGTTG 58.543 55.000 9.73 6.34 36.82 3.77
2329 4457 2.519013 GACAGTTCCAGCAAAGGGAAT 58.481 47.619 0.00 0.00 45.55 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.