Multiple sequence alignment - TraesCS7A01G162400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G162400 chr7A 100.000 8709 0 0 1 8709 118453930 118462638 0.000000e+00 16083.0
1 TraesCS7A01G162400 chr7A 96.203 79 1 2 1836 1913 350426283 350426360 2.550000e-25 128.0
2 TraesCS7A01G162400 chr7A 95.181 83 1 3 1841 1921 401606929 401606848 2.550000e-25 128.0
3 TraesCS7A01G162400 chr7A 100.000 39 0 0 4193 4231 118457827 118457789 1.210000e-08 73.1
4 TraesCS7A01G162400 chr7A 100.000 39 0 0 3860 3898 118458160 118458122 1.210000e-08 73.1
5 TraesCS7A01G162400 chr7B 92.308 2691 136 33 6067 8709 73132366 73135033 0.000000e+00 3757.0
6 TraesCS7A01G162400 chr7B 94.477 1213 43 10 2334 3545 73131186 73132375 0.000000e+00 1847.0
7 TraesCS7A01G162400 chr7B 87.079 1099 101 21 749 1842 73127899 73128961 0.000000e+00 1205.0
8 TraesCS7A01G162400 chr7B 88.456 667 56 9 4486 5143 131087694 131088348 0.000000e+00 785.0
9 TraesCS7A01G162400 chr7B 94.103 390 14 3 1932 2313 73128954 73129342 1.260000e-162 584.0
10 TraesCS7A01G162400 chr7B 80.000 345 41 15 5438 5754 131088794 131089138 6.800000e-56 230.0
11 TraesCS7A01G162400 chr7B 79.151 259 20 6 1 255 73008892 73009120 1.960000e-31 148.0
12 TraesCS7A01G162400 chr7B 81.250 208 18 10 475 680 73127635 73127823 1.960000e-31 148.0
13 TraesCS7A01G162400 chr7B 92.647 68 5 0 4283 4350 56447270 56447337 2.000000e-16 99.0
14 TraesCS7A01G162400 chr7D 93.702 1953 80 16 6067 8007 113443780 113445701 0.000000e+00 2885.0
15 TraesCS7A01G162400 chr7D 96.335 1610 53 3 1932 3535 113442171 113443780 0.000000e+00 2641.0
16 TraesCS7A01G162400 chr7D 88.472 1865 122 50 1 1842 113440384 113442178 0.000000e+00 2167.0
17 TraesCS7A01G162400 chr7D 93.739 591 37 0 5479 6069 40359965 40359375 0.000000e+00 887.0
18 TraesCS7A01G162400 chr7D 87.744 718 52 21 8012 8709 113445748 113446449 0.000000e+00 806.0
19 TraesCS7A01G162400 chr7D 97.111 450 9 3 4697 5143 40388863 40388415 0.000000e+00 756.0
20 TraesCS7A01G162400 chr7D 98.182 330 5 1 3535 3863 40390766 40390437 7.580000e-160 575.0
21 TraesCS7A01G162400 chr7D 93.548 124 2 2 5293 5410 40360085 40359962 6.950000e-41 180.0
22 TraesCS7A01G162400 chr7D 94.231 52 3 0 3530 3581 638520194 638520143 7.250000e-11 80.5
23 TraesCS7A01G162400 chr3A 95.182 1266 36 6 3900 5143 705986943 705988205 0.000000e+00 1977.0
24 TraesCS7A01G162400 chr3A 96.230 504 18 1 5229 5732 705988699 705989201 0.000000e+00 824.0
25 TraesCS7A01G162400 chr3A 96.942 327 8 2 3535 3860 705984476 705984801 1.650000e-151 547.0
26 TraesCS7A01G162400 chr3A 94.545 165 9 0 5829 5993 705989199 705989363 1.120000e-63 255.0
27 TraesCS7A01G162400 chr3A 89.855 69 4 3 6005 6070 705989346 705989414 1.560000e-12 86.1
28 TraesCS7A01G162400 chr3A 100.000 38 0 0 3860 3897 705987283 705987246 4.360000e-08 71.3
29 TraesCS7A01G162400 chr2B 89.486 1284 84 17 3903 5143 770585722 770584447 0.000000e+00 1576.0
30 TraesCS7A01G162400 chr2B 80.705 539 54 26 5275 5769 770583952 770583420 2.970000e-99 374.0
31 TraesCS7A01G162400 chr2B 93.976 83 1 4 1832 1913 275314726 275314805 1.190000e-23 122.0
32 TraesCS7A01G162400 chr3B 88.908 1181 82 16 3986 5143 96859155 96858001 0.000000e+00 1410.0
33 TraesCS7A01G162400 chr3B 94.030 67 4 0 3903 3969 96859557 96859491 1.550000e-17 102.0
34 TraesCS7A01G162400 chr5B 90.250 841 69 5 992 1832 122996341 122995514 0.000000e+00 1086.0
35 TraesCS7A01G162400 chr5B 89.505 667 50 7 4486 5143 123429019 123428364 0.000000e+00 826.0
36 TraesCS7A01G162400 chr5B 88.922 668 51 10 4486 5143 123211701 123211047 0.000000e+00 802.0
37 TraesCS7A01G162400 chr5B 88.060 670 56 10 4486 5143 544538967 544538310 0.000000e+00 773.0
38 TraesCS7A01G162400 chr5B 81.678 584 56 21 5229 5769 123427746 123427171 1.040000e-118 438.0
39 TraesCS7A01G162400 chr5B 81.507 584 57 23 5229 5769 123210429 123209854 4.830000e-117 433.0
40 TraesCS7A01G162400 chr5B 81.963 377 46 9 4219 4577 267304331 267303959 5.110000e-77 300.0
41 TraesCS7A01G162400 chr5B 82.319 345 33 12 5438 5754 544537865 544537521 3.100000e-69 274.0
42 TraesCS7A01G162400 chr5B 95.918 49 2 0 3535 3583 38449852 38449900 7.250000e-11 80.5
43 TraesCS7A01G162400 chr5B 91.071 56 3 2 3526 3580 369900979 369901033 3.370000e-09 75.0
44 TraesCS7A01G162400 chr5B 100.000 31 0 0 5113 5143 704600400 704600430 3.400000e-04 58.4
45 TraesCS7A01G162400 chr6A 90.131 841 71 8 992 1832 567136247 567137075 0.000000e+00 1083.0
46 TraesCS7A01G162400 chr4A 90.024 842 68 10 992 1832 347708106 347707280 0.000000e+00 1075.0
47 TraesCS7A01G162400 chr4A 97.368 76 0 2 1839 1913 733434354 733434428 2.550000e-25 128.0
48 TraesCS7A01G162400 chr1B 89.857 838 72 6 995 1832 32606925 32606101 0.000000e+00 1064.0
49 TraesCS7A01G162400 chr1B 90.137 365 24 3 4480 4843 345535875 345536228 1.710000e-126 464.0
50 TraesCS7A01G162400 chr1B 90.323 310 30 0 4834 5143 345544881 345545190 2.930000e-109 407.0
51 TraesCS7A01G162400 chr1B 79.259 540 60 23 5275 5769 345545646 345546178 6.520000e-86 329.0
52 TraesCS7A01G162400 chr1B 81.919 271 28 9 8452 8706 192274138 192274403 8.860000e-50 209.0
53 TraesCS7A01G162400 chr1B 97.368 76 1 1 1838 1913 132275972 132276046 2.550000e-25 128.0
54 TraesCS7A01G162400 chr1B 95.890 73 2 1 3903 3975 345535802 345535873 5.520000e-22 117.0
55 TraesCS7A01G162400 chr1B 97.917 48 1 0 3535 3582 18383411 18383364 5.600000e-12 84.2
56 TraesCS7A01G162400 chr6B 89.505 667 49 8 4486 5143 516545572 516546226 0.000000e+00 824.0
57 TraesCS7A01G162400 chr6B 98.630 73 0 1 1841 1913 83202826 83202897 2.550000e-25 128.0
58 TraesCS7A01G162400 chr6B 98.630 73 0 1 1841 1913 434635084 434635155 2.550000e-25 128.0
59 TraesCS7A01G162400 chr6B 90.667 75 6 1 2092 2165 650785380 650785454 2.000000e-16 99.0
60 TraesCS7A01G162400 chr6B 89.655 58 5 1 3526 3582 320517365 320517308 1.210000e-08 73.1
61 TraesCS7A01G162400 chr1A 88.540 637 61 7 992 1628 5796859 5797483 0.000000e+00 761.0
62 TraesCS7A01G162400 chr1A 87.598 637 67 7 992 1628 467571524 467570900 0.000000e+00 728.0
63 TraesCS7A01G162400 chr1A 78.492 451 46 27 5258 5665 137075714 137076156 1.880000e-61 248.0
64 TraesCS7A01G162400 chr1A 81.159 276 27 16 8452 8709 146946798 146946530 1.920000e-46 198.0
65 TraesCS7A01G162400 chr2A 88.365 636 60 8 995 1628 668842576 668841953 0.000000e+00 752.0
66 TraesCS7A01G162400 chr2A 94.186 86 3 2 1829 1913 400977924 400978008 7.100000e-26 130.0
67 TraesCS7A01G162400 chr5D 82.447 376 43 10 4219 4577 238174484 238174853 3.050000e-79 307.0
68 TraesCS7A01G162400 chr1D 91.667 108 9 0 8599 8706 143256889 143256996 5.450000e-32 150.0
69 TraesCS7A01G162400 chrUn 97.368 76 1 1 1838 1913 388821707 388821781 2.550000e-25 128.0
70 TraesCS7A01G162400 chr2D 97.826 46 1 0 3537 3582 25863878 25863833 7.250000e-11 80.5
71 TraesCS7A01G162400 chr2D 89.062 64 5 2 3520 3582 71689610 71689672 2.610000e-10 78.7
72 TraesCS7A01G162400 chr4D 100.000 31 0 0 5113 5143 154926736 154926706 3.400000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G162400 chr7A 118453930 118462638 8708 False 16083.00 16083 100.00000 1 8709 1 chr7A.!!$F1 8708
1 TraesCS7A01G162400 chr7B 73127635 73135033 7398 False 1508.20 3757 89.84340 475 8709 5 chr7B.!!$F3 8234
2 TraesCS7A01G162400 chr7B 131087694 131089138 1444 False 507.50 785 84.22800 4486 5754 2 chr7B.!!$F4 1268
3 TraesCS7A01G162400 chr7D 113440384 113446449 6065 False 2124.75 2885 91.56325 1 8709 4 chr7D.!!$F1 8708
4 TraesCS7A01G162400 chr7D 40388415 40390766 2351 True 665.50 756 97.64650 3535 5143 2 chr7D.!!$R3 1608
5 TraesCS7A01G162400 chr7D 40359375 40360085 710 True 533.50 887 93.64350 5293 6069 2 chr7D.!!$R2 776
6 TraesCS7A01G162400 chr3A 705984476 705989414 4938 False 737.82 1977 94.55080 3535 6070 5 chr3A.!!$F1 2535
7 TraesCS7A01G162400 chr2B 770583420 770585722 2302 True 975.00 1576 85.09550 3903 5769 2 chr2B.!!$R1 1866
8 TraesCS7A01G162400 chr3B 96858001 96859557 1556 True 756.00 1410 91.46900 3903 5143 2 chr3B.!!$R1 1240
9 TraesCS7A01G162400 chr5B 122995514 122996341 827 True 1086.00 1086 90.25000 992 1832 1 chr5B.!!$R1 840
10 TraesCS7A01G162400 chr5B 123427171 123429019 1848 True 632.00 826 85.59150 4486 5769 2 chr5B.!!$R4 1283
11 TraesCS7A01G162400 chr5B 123209854 123211701 1847 True 617.50 802 85.21450 4486 5769 2 chr5B.!!$R3 1283
12 TraesCS7A01G162400 chr5B 544537521 544538967 1446 True 523.50 773 85.18950 4486 5754 2 chr5B.!!$R5 1268
13 TraesCS7A01G162400 chr6A 567136247 567137075 828 False 1083.00 1083 90.13100 992 1832 1 chr6A.!!$F1 840
14 TraesCS7A01G162400 chr4A 347707280 347708106 826 True 1075.00 1075 90.02400 992 1832 1 chr4A.!!$R1 840
15 TraesCS7A01G162400 chr1B 32606101 32606925 824 True 1064.00 1064 89.85700 995 1832 1 chr1B.!!$R2 837
16 TraesCS7A01G162400 chr1B 345544881 345546178 1297 False 368.00 407 84.79100 4834 5769 2 chr1B.!!$F4 935
17 TraesCS7A01G162400 chr6B 516545572 516546226 654 False 824.00 824 89.50500 4486 5143 1 chr6B.!!$F3 657
18 TraesCS7A01G162400 chr1A 5796859 5797483 624 False 761.00 761 88.54000 992 1628 1 chr1A.!!$F1 636
19 TraesCS7A01G162400 chr1A 467570900 467571524 624 True 728.00 728 87.59800 992 1628 1 chr1A.!!$R2 636
20 TraesCS7A01G162400 chr2A 668841953 668842576 623 True 752.00 752 88.36500 995 1628 1 chr2A.!!$R1 633

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
340 343 0.028902 AGTCAAAACGCCGACAAAGC 59.971 50.000 0.00 0.0 34.48 3.51 F
824 872 0.603707 TGAAGCCAGAACCTTCGCTG 60.604 55.000 0.00 0.0 41.16 5.18 F
1921 1993 0.174162 GACGCCTTAGGGACGCTTTA 59.826 55.000 0.00 0.0 36.24 1.85 F
1922 1994 0.609662 ACGCCTTAGGGACGCTTTAA 59.390 50.000 0.00 0.0 36.24 1.52 F
3133 5041 0.179100 CATCTGAGTGTACCGCCCTG 60.179 60.000 0.00 0.0 0.00 4.45 F
3646 5556 3.251004 GCATAAGGAAATCGATGACCCAC 59.749 47.826 14.79 0.0 0.00 4.61 F
4668 9519 0.392863 ATGCGGCACATGACAGCTAA 60.393 50.000 4.03 0.0 37.70 3.09 F
5859 11415 0.321210 TTTCACCCGTCACATGCGAT 60.321 50.000 0.00 0.0 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1902 1974 0.174162 TAAAGCGTCCCTAAGGCGTC 59.826 55.000 0.00 0.00 43.57 5.19 R
2193 2270 0.318762 AGACAGGAAGCAACTCCGTC 59.681 55.000 12.31 12.31 40.75 4.79 R
2840 4748 2.658373 GCATGATGCATCCAACACAA 57.342 45.000 23.67 3.58 44.26 3.33 R
3504 5414 2.665165 TGGTGAATGGCAGTTTGAACT 58.335 42.857 0.00 0.00 40.60 3.01 R
4537 9387 0.618458 TTATTTCCGGTCCAGCTGCT 59.382 50.000 8.66 0.00 0.00 4.24 R
5537 11047 0.539438 TGTGGGCATCAACCAGAACC 60.539 55.000 0.00 0.00 39.00 3.62 R
6310 11869 1.227999 ACCCGTGTCGCATTGTTCAG 61.228 55.000 0.00 0.00 0.00 3.02 R
7814 13387 0.108233 TTATGTACCGCGGACAACCC 60.108 55.000 35.90 12.51 0.00 4.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.221891 TGTGATCGCTTCAAATTAAGAGC 57.778 39.130 7.94 0.00 35.70 4.09
25 26 6.256539 TGTGATCGCTTCAAATTAAGAGCTAG 59.743 38.462 7.94 0.00 35.70 3.42
43 44 6.373774 AGAGCTAGATGGAGTTGACAAAATTG 59.626 38.462 0.00 0.00 0.00 2.32
76 77 0.413832 TAGGTCTGGGAAGGACAGCT 59.586 55.000 0.00 0.00 35.94 4.24
104 105 6.821669 TGGAATCGGCCATGCAAATAATGC 62.822 45.833 2.24 0.00 43.73 3.56
121 122 3.728385 ATGCTAGCAGAAAAACTCCCT 57.272 42.857 23.89 0.00 0.00 4.20
122 123 3.059352 TGCTAGCAGAAAAACTCCCTC 57.941 47.619 14.93 0.00 0.00 4.30
123 124 2.003301 GCTAGCAGAAAAACTCCCTCG 58.997 52.381 10.63 0.00 0.00 4.63
124 125 2.613223 GCTAGCAGAAAAACTCCCTCGT 60.613 50.000 10.63 0.00 0.00 4.18
125 126 3.368116 GCTAGCAGAAAAACTCCCTCGTA 60.368 47.826 10.63 0.00 0.00 3.43
126 127 3.320673 AGCAGAAAAACTCCCTCGTAG 57.679 47.619 0.00 0.00 0.00 3.51
127 128 2.897969 AGCAGAAAAACTCCCTCGTAGA 59.102 45.455 0.00 0.00 0.00 2.59
129 130 4.020128 AGCAGAAAAACTCCCTCGTAGAAT 60.020 41.667 0.00 0.00 34.09 2.40
130 131 5.187186 AGCAGAAAAACTCCCTCGTAGAATA 59.813 40.000 0.00 0.00 34.09 1.75
131 132 6.049790 GCAGAAAAACTCCCTCGTAGAATAT 58.950 40.000 0.00 0.00 34.09 1.28
132 133 6.201234 GCAGAAAAACTCCCTCGTAGAATATC 59.799 42.308 0.00 0.00 34.09 1.63
133 134 7.265673 CAGAAAAACTCCCTCGTAGAATATCA 58.734 38.462 0.00 0.00 34.09 2.15
134 135 7.222999 CAGAAAAACTCCCTCGTAGAATATCAC 59.777 40.741 0.00 0.00 34.09 3.06
135 136 6.793505 AAAACTCCCTCGTAGAATATCACT 57.206 37.500 0.00 0.00 34.09 3.41
137 138 7.893124 AAACTCCCTCGTAGAATATCACTAA 57.107 36.000 0.00 0.00 34.09 2.24
138 139 7.513371 AACTCCCTCGTAGAATATCACTAAG 57.487 40.000 0.00 0.00 34.09 2.18
144 145 8.077386 CCCTCGTAGAATATCACTAAGACTTTC 58.923 40.741 0.00 0.00 34.09 2.62
147 148 8.622157 TCGTAGAATATCACTAAGACTTTCCTG 58.378 37.037 0.00 0.00 0.00 3.86
253 256 1.875963 CGGTTTGCTCAAATCGCCT 59.124 52.632 13.94 0.00 45.99 5.52
257 260 2.415491 GGTTTGCTCAAATCGCCTTACC 60.415 50.000 0.00 0.00 32.36 2.85
269 272 5.871396 ATCGCCTTACCTTTCTTCATCTA 57.129 39.130 0.00 0.00 0.00 1.98
271 274 3.797256 CGCCTTACCTTTCTTCATCTACG 59.203 47.826 0.00 0.00 0.00 3.51
281 284 7.011482 ACCTTTCTTCATCTACGATTGTAATGC 59.989 37.037 0.00 0.00 0.00 3.56
284 287 6.524734 TCTTCATCTACGATTGTAATGCCAT 58.475 36.000 0.00 0.00 0.00 4.40
285 288 6.424812 TCTTCATCTACGATTGTAATGCCATG 59.575 38.462 0.00 0.00 0.00 3.66
286 289 5.610398 TCATCTACGATTGTAATGCCATGT 58.390 37.500 0.00 0.00 0.00 3.21
287 290 5.466393 TCATCTACGATTGTAATGCCATGTG 59.534 40.000 0.00 0.00 0.00 3.21
290 293 2.023673 CGATTGTAATGCCATGTGGGT 58.976 47.619 0.54 0.00 39.65 4.51
293 296 4.320421 CGATTGTAATGCCATGTGGGTATG 60.320 45.833 0.54 0.00 41.68 2.39
297 300 0.468585 ATGCCATGTGGGTATGCAGG 60.469 55.000 0.54 0.00 40.90 4.85
299 302 0.182537 GCCATGTGGGTATGCAGGTA 59.817 55.000 0.54 0.00 39.65 3.08
300 303 1.202927 GCCATGTGGGTATGCAGGTAT 60.203 52.381 0.54 0.00 39.65 2.73
301 304 2.752829 GCCATGTGGGTATGCAGGTATT 60.753 50.000 0.54 0.00 39.65 1.89
302 305 2.886523 CCATGTGGGTATGCAGGTATTG 59.113 50.000 0.00 0.00 0.00 1.90
303 306 3.554934 CATGTGGGTATGCAGGTATTGT 58.445 45.455 0.00 0.00 0.00 2.71
304 307 3.730215 TGTGGGTATGCAGGTATTGTT 57.270 42.857 0.00 0.00 0.00 2.83
305 308 4.846168 TGTGGGTATGCAGGTATTGTTA 57.154 40.909 0.00 0.00 0.00 2.41
314 317 3.566322 TGCAGGTATTGTTAACACACCAC 59.434 43.478 28.08 22.23 30.32 4.16
329 332 3.728718 CACACCACGCAATTAGTCAAAAC 59.271 43.478 0.00 0.00 0.00 2.43
330 333 2.970609 CACCACGCAATTAGTCAAAACG 59.029 45.455 0.00 0.00 0.00 3.60
331 334 1.976045 CCACGCAATTAGTCAAAACGC 59.024 47.619 0.00 0.00 0.00 4.84
332 335 1.976045 CACGCAATTAGTCAAAACGCC 59.024 47.619 0.00 0.00 0.00 5.68
333 336 1.246970 CGCAATTAGTCAAAACGCCG 58.753 50.000 0.00 0.00 0.00 6.46
334 337 1.136197 CGCAATTAGTCAAAACGCCGA 60.136 47.619 0.00 0.00 0.00 5.54
335 338 2.239201 GCAATTAGTCAAAACGCCGAC 58.761 47.619 0.00 0.00 0.00 4.79
336 339 2.350007 GCAATTAGTCAAAACGCCGACA 60.350 45.455 0.00 0.00 34.48 4.35
337 340 3.850374 GCAATTAGTCAAAACGCCGACAA 60.850 43.478 0.00 0.00 34.48 3.18
339 342 3.595709 TTAGTCAAAACGCCGACAAAG 57.404 42.857 0.00 0.00 34.48 2.77
340 343 0.028902 AGTCAAAACGCCGACAAAGC 59.971 50.000 0.00 0.00 34.48 3.51
342 345 0.665835 TCAAAACGCCGACAAAGCAT 59.334 45.000 0.00 0.00 0.00 3.79
343 346 1.066303 TCAAAACGCCGACAAAGCATT 59.934 42.857 0.00 0.00 0.00 3.56
346 349 2.217429 AACGCCGACAAAGCATTTTT 57.783 40.000 0.00 0.00 35.03 1.94
347 350 3.357166 AACGCCGACAAAGCATTTTTA 57.643 38.095 0.00 0.00 35.03 1.52
349 352 2.292292 ACGCCGACAAAGCATTTTTACT 59.708 40.909 0.00 0.00 35.03 2.24
350 353 3.243267 ACGCCGACAAAGCATTTTTACTT 60.243 39.130 0.00 0.00 35.03 2.24
351 354 3.733727 CGCCGACAAAGCATTTTTACTTT 59.266 39.130 0.00 0.00 35.03 2.66
357 360 5.633996 CAAAGCATTTTTACTTTGCGACA 57.366 34.783 2.87 0.00 44.32 4.35
358 361 6.030379 CAAAGCATTTTTACTTTGCGACAA 57.970 33.333 2.87 0.00 44.32 3.18
359 362 6.473521 CAAAGCATTTTTACTTTGCGACAAA 58.526 32.000 2.87 5.20 44.32 2.83
360 363 5.635549 AGCATTTTTACTTTGCGACAAAC 57.364 34.783 1.63 0.00 41.22 2.93
361 364 5.105752 AGCATTTTTACTTTGCGACAAACA 58.894 33.333 1.63 0.00 41.22 2.83
362 365 5.578727 AGCATTTTTACTTTGCGACAAACAA 59.421 32.000 1.63 0.00 41.22 2.83
363 366 6.091441 AGCATTTTTACTTTGCGACAAACAAA 59.909 30.769 1.63 0.00 41.22 2.83
367 370 2.977054 CTTTGCGACAAACAAAGCAC 57.023 45.000 3.56 0.00 45.23 4.40
368 371 2.529151 CTTTGCGACAAACAAAGCACT 58.471 42.857 3.56 0.00 45.23 4.40
369 372 3.690422 CTTTGCGACAAACAAAGCACTA 58.310 40.909 3.56 0.00 45.23 2.74
373 376 4.486090 TGCGACAAACAAAGCACTAAAAA 58.514 34.783 0.00 0.00 34.39 1.94
376 379 6.091441 TGCGACAAACAAAGCACTAAAAATTT 59.909 30.769 0.00 0.00 34.39 1.82
402 405 7.093902 TGTGAACCTAAATGAACTAGATCGACT 60.094 37.037 0.00 0.00 0.00 4.18
403 406 7.221067 GTGAACCTAAATGAACTAGATCGACTG 59.779 40.741 0.00 0.00 0.00 3.51
404 407 7.122204 TGAACCTAAATGAACTAGATCGACTGA 59.878 37.037 0.00 0.00 0.00 3.41
405 408 6.797454 ACCTAAATGAACTAGATCGACTGAC 58.203 40.000 0.00 0.00 0.00 3.51
450 453 4.338379 AGTGTGTTTTCTCCTCAGGTAC 57.662 45.455 0.00 0.00 0.00 3.34
456 459 5.875359 GTGTTTTCTCCTCAGGTACATAAGG 59.125 44.000 0.00 0.00 0.00 2.69
458 461 2.307768 TCTCCTCAGGTACATAAGGCG 58.692 52.381 0.00 0.00 0.00 5.52
470 473 5.241064 GGTACATAAGGCGTATCTTCTCTGA 59.759 44.000 0.00 0.00 0.00 3.27
498 501 9.736023 AGAAGAAAACTCAAAATGTACATGTTC 57.264 29.630 9.63 0.00 0.00 3.18
555 560 8.647143 AAAGAACAAATGTTTCATTTCGACAT 57.353 26.923 0.00 0.00 38.56 3.06
556 561 9.743057 AAAGAACAAATGTTTCATTTCGACATA 57.257 25.926 0.00 0.00 38.56 2.29
558 563 9.912634 AGAACAAATGTTTCATTTCGACATAAT 57.087 25.926 0.00 0.00 38.56 1.28
629 634 7.563556 TCCTAAATTTTGGTCTTCACTCCTTTT 59.436 33.333 16.70 0.00 0.00 2.27
634 639 3.593942 TGGTCTTCACTCCTTTTCCCTA 58.406 45.455 0.00 0.00 0.00 3.53
716 755 3.010420 CCAAGACAAACTAGGGCTTAGC 58.990 50.000 3.21 0.00 32.25 3.09
769 816 6.148150 CACGAATTTAGGCCTAAAAGTACACA 59.852 38.462 35.41 15.73 38.38 3.72
824 872 0.603707 TGAAGCCAGAACCTTCGCTG 60.604 55.000 0.00 0.00 41.16 5.18
863 911 1.457455 CCAACCCAACCCAACAGCT 60.457 57.895 0.00 0.00 0.00 4.24
923 988 1.010795 CCTCCCCCTTCCCTCAAAAT 58.989 55.000 0.00 0.00 0.00 1.82
924 989 2.214201 CCTCCCCCTTCCCTCAAAATA 58.786 52.381 0.00 0.00 0.00 1.40
925 990 2.585432 CCTCCCCCTTCCCTCAAAATAA 59.415 50.000 0.00 0.00 0.00 1.40
926 991 3.012388 CCTCCCCCTTCCCTCAAAATAAA 59.988 47.826 0.00 0.00 0.00 1.40
933 998 8.556589 CCCCCTTCCCTCAAAATAAAATAAAAT 58.443 33.333 0.00 0.00 0.00 1.82
1316 1385 0.957395 ATCTGCGAGCAGTGGTTTGG 60.957 55.000 22.47 0.00 43.96 3.28
1317 1386 1.597854 CTGCGAGCAGTGGTTTGGA 60.598 57.895 16.29 0.00 39.10 3.53
1322 1391 1.264288 CGAGCAGTGGTTTGGAAGTTC 59.736 52.381 0.00 0.00 0.00 3.01
1336 1405 4.963373 TGGAAGTTCGGTCTGTAATTGAA 58.037 39.130 0.00 0.00 0.00 2.69
1343 1412 7.138736 AGTTCGGTCTGTAATTGAACAATTTG 58.861 34.615 16.12 8.79 40.95 2.32
1344 1413 6.627395 TCGGTCTGTAATTGAACAATTTGT 57.373 33.333 16.12 0.00 40.99 2.83
1348 1417 7.484641 CGGTCTGTAATTGAACAATTTGTATGG 59.515 37.037 16.12 4.49 40.99 2.74
1350 1419 7.275560 GTCTGTAATTGAACAATTTGTATGGCC 59.724 37.037 16.12 0.00 40.99 5.36
1354 1423 6.805016 ATTGAACAATTTGTATGGCCCATA 57.195 33.333 0.00 0.00 0.00 2.74
1355 1424 6.611613 TTGAACAATTTGTATGGCCCATAA 57.388 33.333 4.67 0.00 0.00 1.90
1365 1434 5.622180 TGTATGGCCCATAACGCTAATTTA 58.378 37.500 4.67 0.00 0.00 1.40
1366 1435 5.703592 TGTATGGCCCATAACGCTAATTTAG 59.296 40.000 4.67 0.00 0.00 1.85
1401 1470 6.526674 GCTCATAATGGTTTACTTTTTGGACG 59.473 38.462 0.00 0.00 0.00 4.79
1439 1508 1.815003 GTGGAGAATTTGGTGCAGGAG 59.185 52.381 0.00 0.00 0.00 3.69
1474 1543 3.002791 GGATCTTCAGAAATGTGCGTCA 58.997 45.455 0.00 0.00 0.00 4.35
1529 1598 3.181440 TGGGGCCATCATAGAGTCATTTC 60.181 47.826 4.39 0.00 0.00 2.17
1640 1709 6.594159 ACACTTGTTTCATAAGATAACCGGAG 59.406 38.462 9.46 0.00 0.00 4.63
1641 1710 6.816640 CACTTGTTTCATAAGATAACCGGAGA 59.183 38.462 9.46 0.00 0.00 3.71
1771 1841 4.828939 TGGCATCCAATAGGCATTTCTTAG 59.171 41.667 0.00 0.00 36.32 2.18
1842 1914 2.562298 TGAATTTGCAACCAGTGGGATC 59.438 45.455 15.21 1.89 38.05 3.36
1843 1915 2.610438 ATTTGCAACCAGTGGGATCT 57.390 45.000 15.21 0.00 38.05 2.75
1844 1916 3.737559 ATTTGCAACCAGTGGGATCTA 57.262 42.857 15.21 0.00 38.05 1.98
1845 1917 3.737559 TTTGCAACCAGTGGGATCTAT 57.262 42.857 15.21 0.00 38.05 1.98
1846 1918 2.715749 TGCAACCAGTGGGATCTATG 57.284 50.000 15.21 3.77 38.05 2.23
1847 1919 1.915489 TGCAACCAGTGGGATCTATGT 59.085 47.619 15.21 0.00 38.05 2.29
1848 1920 2.308570 TGCAACCAGTGGGATCTATGTT 59.691 45.455 15.21 0.00 38.05 2.71
1849 1921 3.245229 TGCAACCAGTGGGATCTATGTTT 60.245 43.478 15.21 0.00 38.05 2.83
1850 1922 3.763897 GCAACCAGTGGGATCTATGTTTT 59.236 43.478 15.21 0.00 38.05 2.43
1851 1923 4.220602 GCAACCAGTGGGATCTATGTTTTT 59.779 41.667 15.21 0.00 38.05 1.94
1852 1924 5.417580 GCAACCAGTGGGATCTATGTTTTTA 59.582 40.000 15.21 0.00 38.05 1.52
1853 1925 6.071616 GCAACCAGTGGGATCTATGTTTTTAA 60.072 38.462 15.21 0.00 38.05 1.52
1854 1926 7.538575 CAACCAGTGGGATCTATGTTTTTAAG 58.461 38.462 15.21 0.00 38.05 1.85
1855 1927 6.187682 ACCAGTGGGATCTATGTTTTTAAGG 58.812 40.000 15.21 0.00 38.05 2.69
1856 1928 5.067805 CCAGTGGGATCTATGTTTTTAAGGC 59.932 44.000 0.00 0.00 35.59 4.35
1857 1929 4.881850 AGTGGGATCTATGTTTTTAAGGCG 59.118 41.667 0.00 0.00 0.00 5.52
1858 1930 4.879545 GTGGGATCTATGTTTTTAAGGCGA 59.120 41.667 0.00 0.00 0.00 5.54
1859 1931 4.879545 TGGGATCTATGTTTTTAAGGCGAC 59.120 41.667 0.00 0.00 0.00 5.19
1860 1932 4.025145 GGGATCTATGTTTTTAAGGCGACG 60.025 45.833 0.00 0.00 0.00 5.12
1861 1933 4.515432 GATCTATGTTTTTAAGGCGACGC 58.485 43.478 12.43 12.43 0.00 5.19
1873 1945 2.491152 CGACGCCTTACCGCCTTA 59.509 61.111 0.00 0.00 0.00 2.69
1874 1946 1.588139 CGACGCCTTACCGCCTTAG 60.588 63.158 0.00 0.00 0.00 2.18
1875 1947 1.227176 GACGCCTTACCGCCTTAGG 60.227 63.158 0.00 0.00 37.30 2.69
1876 1948 2.108362 CGCCTTACCGCCTTAGGG 59.892 66.667 0.00 0.00 35.02 3.53
1877 1949 2.428925 CGCCTTACCGCCTTAGGGA 61.429 63.158 0.00 0.00 35.02 4.20
1878 1950 1.446366 GCCTTACCGCCTTAGGGAG 59.554 63.158 0.00 0.00 35.02 4.30
1916 1988 4.867599 GGCGACGCCTTAGGGACG 62.868 72.222 31.30 3.99 46.69 4.79
1918 1990 3.823330 CGACGCCTTAGGGACGCT 61.823 66.667 0.00 0.00 37.30 5.07
1919 1991 2.577593 GACGCCTTAGGGACGCTT 59.422 61.111 0.00 0.00 36.24 4.68
1920 1992 1.079336 GACGCCTTAGGGACGCTTT 60.079 57.895 0.00 0.00 36.24 3.51
1921 1993 0.174162 GACGCCTTAGGGACGCTTTA 59.826 55.000 0.00 0.00 36.24 1.85
1922 1994 0.609662 ACGCCTTAGGGACGCTTTAA 59.390 50.000 0.00 0.00 36.24 1.52
1923 1995 1.002315 ACGCCTTAGGGACGCTTTAAA 59.998 47.619 0.00 0.00 36.24 1.52
1924 1996 2.078392 CGCCTTAGGGACGCTTTAAAA 58.922 47.619 0.00 0.00 33.58 1.52
1925 1997 2.485038 CGCCTTAGGGACGCTTTAAAAA 59.515 45.455 0.00 0.00 33.58 1.94
1926 1998 3.668757 CGCCTTAGGGACGCTTTAAAAAC 60.669 47.826 0.00 0.00 33.58 2.43
1927 1999 3.253921 GCCTTAGGGACGCTTTAAAAACA 59.746 43.478 0.00 0.00 33.58 2.83
1928 2000 4.082408 GCCTTAGGGACGCTTTAAAAACAT 60.082 41.667 0.00 0.00 33.58 2.71
1929 2001 5.124297 GCCTTAGGGACGCTTTAAAAACATA 59.876 40.000 0.00 0.00 33.58 2.29
1930 2002 6.677187 GCCTTAGGGACGCTTTAAAAACATAG 60.677 42.308 0.00 0.00 33.58 2.23
1940 2012 6.093495 CGCTTTAAAAACATAGAGTGGGATGA 59.907 38.462 0.00 0.00 0.00 2.92
1948 2020 5.089434 ACATAGAGTGGGATGATGAGCATA 58.911 41.667 0.00 0.00 37.34 3.14
2002 2077 8.854312 GCGGAATTCTTTCTTAGAAAAATGAAG 58.146 33.333 8.82 0.00 45.62 3.02
2028 2103 1.273606 GTCTAGTCAAGGTGCTCTGCA 59.726 52.381 0.00 0.00 35.60 4.41
2197 2274 5.707242 TTAATATACTCTCTGCTGGACGG 57.293 43.478 0.00 0.00 0.00 4.79
2264 2349 3.077229 TGACAAAAAGCCACATCAACG 57.923 42.857 0.00 0.00 0.00 4.10
2318 2403 6.952605 TCCCTACAATTATCAATAGGAGGG 57.047 41.667 1.44 1.44 42.19 4.30
2368 4276 3.809832 TCTGCTAGAACAAAACAGACTGC 59.190 43.478 1.25 0.00 32.65 4.40
2455 4363 7.750903 GTGGCAGATTAATTTAGTGAGTTTGTC 59.249 37.037 0.00 0.00 0.00 3.18
2458 4366 9.282247 GCAGATTAATTTAGTGAGTTTGTCATG 57.718 33.333 0.00 0.00 37.56 3.07
2473 4381 2.017049 GTCATGTGATGTTGTAGGGGC 58.983 52.381 0.00 0.00 0.00 5.80
2500 4408 5.788055 CAAATGCATTCTATTGCTTTGCA 57.212 34.783 13.38 0.00 46.22 4.08
2581 4489 2.070262 TCACTCTTCATCGCACAGTG 57.930 50.000 0.00 0.00 36.58 3.66
2825 4733 6.638468 GCCGATGAATATGGAATTTTTCAGAC 59.362 38.462 0.00 0.00 32.92 3.51
2840 4748 4.607293 TTCAGACAACATAGCTGTCAGT 57.393 40.909 0.00 0.00 44.68 3.41
2861 4769 3.002038 TGTGTTGGATGCATCATGCTA 57.998 42.857 27.25 7.34 45.31 3.49
3026 4934 4.991056 TGCCTATGTATCTCGAAAATGAGC 59.009 41.667 0.00 0.00 35.90 4.26
3053 4961 2.494471 TGATTTCATTTGCTGGCCTCAG 59.506 45.455 3.32 0.00 43.64 3.35
3061 4969 1.279496 TGCTGGCCTCAGATAGTTGT 58.721 50.000 3.32 0.00 43.49 3.32
3071 4979 6.408206 GGCCTCAGATAGTTGTAACTGGTAAT 60.408 42.308 7.50 0.00 40.07 1.89
3123 5031 9.761504 AGATTTTGTCTATGTATCATCTGAGTG 57.238 33.333 0.00 0.00 34.69 3.51
3133 5041 0.179100 CATCTGAGTGTACCGCCCTG 60.179 60.000 0.00 0.00 0.00 4.45
3153 5061 5.843969 CCCTGGGTGCCCTTTATTATATTTT 59.156 40.000 3.97 0.00 36.94 1.82
3456 5366 8.563732 GCTCAAATAGTTATCTTCCTGAATTCC 58.436 37.037 2.27 0.00 0.00 3.01
3504 5414 7.056006 ACATCATCCATAGCTGTTATCAAACA 58.944 34.615 0.00 0.00 43.32 2.83
3646 5556 3.251004 GCATAAGGAAATCGATGACCCAC 59.749 47.826 14.79 0.00 0.00 4.61
3869 5779 8.532977 TTTATTTAGGTTCTTTGATTTGCAGC 57.467 30.769 0.00 0.00 0.00 5.25
3871 5781 3.930634 AGGTTCTTTGATTTGCAGCTC 57.069 42.857 0.00 0.00 0.00 4.09
3889 7322 5.035443 CAGCTCTGCAATAGAAGAAAATGC 58.965 41.667 0.00 0.00 34.32 3.56
3890 7323 4.703575 AGCTCTGCAATAGAAGAAAATGCA 59.296 37.500 0.00 0.00 44.07 3.96
3896 7329 7.218228 TGCAATAGAAGAAAATGCAGAAAGA 57.782 32.000 0.00 0.00 41.67 2.52
3897 7330 7.660112 TGCAATAGAAGAAAATGCAGAAAGAA 58.340 30.769 0.00 0.00 41.67 2.52
3898 7331 7.811236 TGCAATAGAAGAAAATGCAGAAAGAAG 59.189 33.333 0.00 0.00 41.67 2.85
3900 7333 9.557338 CAATAGAAGAAAATGCAGAAAGAAGAG 57.443 33.333 0.00 0.00 0.00 2.85
3901 7334 6.011476 AGAAGAAAATGCAGAAAGAAGAGC 57.989 37.500 0.00 0.00 0.00 4.09
4243 9070 4.864247 GCTGCAAATCACACGGAAAATTAT 59.136 37.500 0.00 0.00 0.00 1.28
4432 9281 7.893236 CACGTACTTCATTTATCTTGTTCTTCG 59.107 37.037 0.00 0.00 0.00 3.79
4478 9327 5.292101 CAGAGAGAAAACTAAAGCATACCCG 59.708 44.000 0.00 0.00 0.00 5.28
4512 9362 7.556275 TCTTAACAACAGAAGGATGAAAACAGT 59.444 33.333 0.00 0.00 0.00 3.55
4537 9387 7.012327 GTGTGTCATTCATAATGCTTAGCCTAA 59.988 37.037 0.29 0.00 38.77 2.69
4538 9388 7.227314 TGTGTCATTCATAATGCTTAGCCTAAG 59.773 37.037 7.13 7.13 38.77 2.18
4668 9519 0.392863 ATGCGGCACATGACAGCTAA 60.393 50.000 4.03 0.00 37.70 3.09
5153 10047 8.925161 TTTGAATTTATGCCTTGTATTGTAGC 57.075 30.769 0.00 0.00 0.00 3.58
5155 10049 7.479980 TGAATTTATGCCTTGTATTGTAGCAC 58.520 34.615 0.00 0.00 36.06 4.40
5156 10050 7.339212 TGAATTTATGCCTTGTATTGTAGCACT 59.661 33.333 0.00 0.00 36.06 4.40
5157 10051 7.645058 ATTTATGCCTTGTATTGTAGCACTT 57.355 32.000 0.00 0.00 36.06 3.16
5158 10052 4.970662 ATGCCTTGTATTGTAGCACTTG 57.029 40.909 0.00 0.00 36.06 3.16
5163 10171 6.828273 TGCCTTGTATTGTAGCACTTGATATT 59.172 34.615 0.00 0.00 0.00 1.28
5171 10179 6.609237 TGTAGCACTTGATATTGAAGATGC 57.391 37.500 3.16 7.96 32.37 3.91
5172 10180 5.528690 TGTAGCACTTGATATTGAAGATGCC 59.471 40.000 13.34 6.21 32.49 4.40
5173 10181 3.562973 AGCACTTGATATTGAAGATGCCG 59.437 43.478 13.34 0.00 32.49 5.69
5175 10183 4.319333 GCACTTGATATTGAAGATGCCGAG 60.319 45.833 3.16 0.00 0.00 4.63
5179 10187 5.034852 TGATATTGAAGATGCCGAGGAAA 57.965 39.130 0.00 0.00 0.00 3.13
5182 10190 2.559698 TGAAGATGCCGAGGAAACAA 57.440 45.000 0.00 0.00 0.00 2.83
5183 10191 2.857483 TGAAGATGCCGAGGAAACAAA 58.143 42.857 0.00 0.00 0.00 2.83
5184 10192 3.420893 TGAAGATGCCGAGGAAACAAAT 58.579 40.909 0.00 0.00 0.00 2.32
5187 10195 5.123820 TGAAGATGCCGAGGAAACAAATTAG 59.876 40.000 0.00 0.00 0.00 1.73
5188 10196 4.843728 AGATGCCGAGGAAACAAATTAGA 58.156 39.130 0.00 0.00 0.00 2.10
5189 10197 5.253330 AGATGCCGAGGAAACAAATTAGAA 58.747 37.500 0.00 0.00 0.00 2.10
5191 10199 5.975693 TGCCGAGGAAACAAATTAGAATT 57.024 34.783 0.00 0.00 0.00 2.17
5192 10200 5.708948 TGCCGAGGAAACAAATTAGAATTG 58.291 37.500 0.00 0.00 0.00 2.32
5193 10201 5.242838 TGCCGAGGAAACAAATTAGAATTGT 59.757 36.000 0.00 0.00 42.56 2.71
5196 10204 6.801862 CCGAGGAAACAAATTAGAATTGTGAC 59.198 38.462 0.00 0.00 39.98 3.67
5199 10207 8.871686 AGGAAACAAATTAGAATTGTGACAAC 57.128 30.769 0.00 0.00 39.98 3.32
5201 10209 8.755018 GGAAACAAATTAGAATTGTGACAACTG 58.245 33.333 0.00 0.00 39.98 3.16
5204 10212 9.950680 AACAAATTAGAATTGTGACAACTGTAG 57.049 29.630 0.00 0.00 39.98 2.74
5207 10215 6.539649 TTAGAATTGTGACAACTGTAGCAC 57.460 37.500 0.00 0.00 0.00 4.40
5208 10216 4.708177 AGAATTGTGACAACTGTAGCACT 58.292 39.130 0.00 0.00 32.69 4.40
5210 10218 4.818534 ATTGTGACAACTGTAGCACTTG 57.181 40.909 0.00 0.00 32.69 3.16
5211 10219 3.535280 TGTGACAACTGTAGCACTTGA 57.465 42.857 0.00 0.00 32.69 3.02
5212 10220 4.071961 TGTGACAACTGTAGCACTTGAT 57.928 40.909 0.00 0.00 32.69 2.57
5213 10221 5.208463 TGTGACAACTGTAGCACTTGATA 57.792 39.130 0.00 0.00 32.69 2.15
5214 10222 5.606505 TGTGACAACTGTAGCACTTGATAA 58.393 37.500 0.00 0.00 32.69 1.75
5215 10223 6.230472 TGTGACAACTGTAGCACTTGATAAT 58.770 36.000 0.00 0.00 32.69 1.28
5216 10224 6.368791 TGTGACAACTGTAGCACTTGATAATC 59.631 38.462 0.00 0.00 32.69 1.75
5217 10225 6.591834 GTGACAACTGTAGCACTTGATAATCT 59.408 38.462 0.00 0.00 0.00 2.40
5218 10226 7.759886 GTGACAACTGTAGCACTTGATAATCTA 59.240 37.037 0.00 0.00 0.00 1.98
5220 10228 9.319143 GACAACTGTAGCACTTGATAATCTAAT 57.681 33.333 0.00 0.00 0.00 1.73
5221 10229 9.672673 ACAACTGTAGCACTTGATAATCTAATT 57.327 29.630 0.00 0.00 0.00 1.40
5537 11047 0.812811 CATCCATGGAGGTCGCTGTG 60.813 60.000 21.33 6.96 39.02 3.66
5742 11298 0.338814 ATGGGAAGTAGAGGGGACGT 59.661 55.000 0.00 0.00 0.00 4.34
5757 11313 2.202676 CGTGAGGCTCGAGGAAGC 60.203 66.667 15.58 0.00 41.73 3.86
5769 11325 0.545646 GAGGAAGCAGAGGATTGGCT 59.454 55.000 0.00 0.00 40.14 4.75
5812 11368 1.379527 GAATCGACCAACCCCACATC 58.620 55.000 0.00 0.00 0.00 3.06
5859 11415 0.321210 TTTCACCCGTCACATGCGAT 60.321 50.000 0.00 0.00 0.00 4.58
5900 11456 2.332654 CGCAAGGAAAGGAACCCCG 61.333 63.158 0.00 0.00 37.58 5.73
5931 11487 2.134789 ATGGAGCCTGAAAGCGAAAT 57.865 45.000 0.00 0.00 38.01 2.17
5984 11540 3.323243 AGCAGCGTAAAAACGTATGACT 58.677 40.909 0.00 4.18 35.26 3.41
5986 11542 3.120786 GCAGCGTAAAAACGTATGACTGT 60.121 43.478 0.00 0.00 35.26 3.55
6106 11663 5.473504 GCTTGGACTACCTTCAGATTTTCAA 59.526 40.000 0.00 0.00 37.04 2.69
6107 11664 6.016276 GCTTGGACTACCTTCAGATTTTCAAA 60.016 38.462 0.00 0.00 37.04 2.69
6310 11869 4.317839 CGTACTATCAAGTAAACCGCATGC 60.318 45.833 7.91 7.91 39.90 4.06
6353 11912 3.375610 TGCATACAACACACGTTCTGTTT 59.624 39.130 5.76 2.32 31.13 2.83
6445 12004 2.159184 TCTGCTCTTTCTGGCTGTATCG 60.159 50.000 0.00 0.00 0.00 2.92
6519 12078 1.078759 GTCAATCTGACGTGAGGGCG 61.079 60.000 1.12 0.00 37.67 6.13
6539 12098 3.187227 GCGGACAAGAAGGTATATGCATG 59.813 47.826 10.16 0.00 0.00 4.06
6544 12103 4.883585 ACAAGAAGGTATATGCATGGTGTG 59.116 41.667 10.16 0.00 0.00 3.82
6681 12241 7.912250 GCTTTTATTGTGAGGAATATGTCACTG 59.088 37.037 12.11 0.00 43.03 3.66
6706 12268 7.203218 GTGTAGTACACTCATCATCATGCTAA 58.797 38.462 23.44 0.00 45.27 3.09
6749 12311 5.360999 AGCTTCTTACCATTATTTGCTTCCC 59.639 40.000 0.00 0.00 0.00 3.97
6829 12391 4.983090 CGACAATCAATCGCCTGC 57.017 55.556 0.00 0.00 31.96 4.85
6867 12429 4.142315 CCTGGTCACAAGATATTTTGGCTG 60.142 45.833 10.46 1.43 32.32 4.85
6885 12447 3.181440 GGCTGTCCATCCTTGATATTGGA 60.181 47.826 0.00 0.00 35.93 3.53
6916 12478 4.265073 ACTTATGGTGAGTCTTTGGATGC 58.735 43.478 0.00 0.00 0.00 3.91
7005 12568 5.446860 TCGTACTTCCTGGAGATACTGAAT 58.553 41.667 14.11 0.00 0.00 2.57
7006 12569 5.299531 TCGTACTTCCTGGAGATACTGAATG 59.700 44.000 14.11 3.09 0.00 2.67
7018 12581 8.493607 TGGAGATACTGAATGAATCCATGTTAA 58.506 33.333 0.00 0.00 32.36 2.01
7129 12695 3.623960 CCATGCAATTGGCTTGTATTTGG 59.376 43.478 7.72 0.00 44.00 3.28
7151 12717 9.832445 TTTGGTAGCCTTCATTATAGAACTAAG 57.168 33.333 0.00 0.00 0.00 2.18
7263 12829 6.883756 TGTATTTGCTGGAATCATACTGTTCA 59.116 34.615 5.67 0.00 0.00 3.18
7280 12846 3.379057 TGTTCATCTGTGCCTGCATTATG 59.621 43.478 0.00 0.53 0.00 1.90
7525 13091 5.811100 GCTATTCTGGTTGTAGTTGGTAGTC 59.189 44.000 0.00 0.00 0.00 2.59
7533 13099 6.270463 TGGTTGTAGTTGGTAGTCATAAAGGA 59.730 38.462 0.00 0.00 0.00 3.36
7647 13213 5.247110 AGCTGACCTCTCTTATTGTTGAGAA 59.753 40.000 0.00 0.00 38.64 2.87
7734 13300 4.843728 TGTTCATATCTTTCGGGCTCTTT 58.156 39.130 0.00 0.00 0.00 2.52
7737 13303 4.843728 TCATATCTTTCGGGCTCTTTGTT 58.156 39.130 0.00 0.00 0.00 2.83
7738 13304 4.876107 TCATATCTTTCGGGCTCTTTGTTC 59.124 41.667 0.00 0.00 0.00 3.18
7745 13311 1.674221 CGGGCTCTTTGTTCAGAGGAG 60.674 57.143 0.08 0.00 40.79 3.69
7814 13387 1.545582 ACTGACCATTTGGCAAATCGG 59.454 47.619 26.13 26.13 39.32 4.18
7839 13412 0.742505 TCCGCGGTACATAAGAGGTG 59.257 55.000 27.15 0.00 0.00 4.00
7858 13433 4.423625 GTGGTTAGGAGATAGCCAACAT 57.576 45.455 0.00 0.00 45.32 2.71
7884 13459 6.266330 TGGGTAGATACTCTGATGTTCATCTG 59.734 42.308 12.94 12.25 0.00 2.90
7927 13502 0.179174 GTTGCCGTTATTCTTGCCCG 60.179 55.000 0.00 0.00 0.00 6.13
7933 13509 1.153249 TTATTCTTGCCCGCCCTCG 60.153 57.895 0.00 0.00 0.00 4.63
7947 13523 2.352030 CGCCCTCGTGTTGTACTTCTTA 60.352 50.000 0.00 0.00 0.00 2.10
7955 13531 6.798482 TCGTGTTGTACTTCTTAAGAACTCA 58.202 36.000 13.99 10.16 0.00 3.41
7967 13543 6.565234 TCTTAAGAACTCATCTCATCGGTTC 58.435 40.000 1.68 0.00 37.42 3.62
8045 13663 4.034510 CAGAATGTACCCTTCGATCTTTGC 59.965 45.833 0.00 0.00 0.00 3.68
8046 13664 3.914426 ATGTACCCTTCGATCTTTGCT 57.086 42.857 0.00 0.00 0.00 3.91
8047 13665 3.695830 TGTACCCTTCGATCTTTGCTT 57.304 42.857 0.00 0.00 0.00 3.91
8060 13678 9.607285 TTCGATCTTTGCTTATAACAAGAAAAC 57.393 29.630 0.00 0.00 0.00 2.43
8063 13681 9.899226 GATCTTTGCTTATAACAAGAAAACTGT 57.101 29.630 2.58 0.00 0.00 3.55
8086 13704 6.432783 TGTCCCTTGTTTGTACTTTGGATATG 59.567 38.462 0.00 0.00 0.00 1.78
8087 13705 6.657541 GTCCCTTGTTTGTACTTTGGATATGA 59.342 38.462 0.00 0.00 0.00 2.15
8110 13729 8.600449 TGAATAATTTACTTTTTGGCCACTTG 57.400 30.769 3.88 0.00 0.00 3.16
8122 13741 1.340889 GGCCACTTGACTGCATTTTCA 59.659 47.619 0.00 0.00 0.00 2.69
8153 13772 9.630098 AACAATTGTGAAGTCATGACAAATATC 57.370 29.630 27.02 16.02 33.50 1.63
8166 13785 8.843262 TCATGACAAATATCTTTGATAGCCAAG 58.157 33.333 10.27 0.00 43.71 3.61
8181 13800 9.733556 TTGATAGCCAAGATTTTAACTTGTAGA 57.266 29.630 0.00 0.00 41.88 2.59
8200 13819 7.120923 TGTAGATTTGGGTTCTCATAGTACC 57.879 40.000 0.00 0.00 35.22 3.34
8204 13823 2.463752 TGGGTTCTCATAGTACCGCTT 58.536 47.619 0.00 0.00 36.62 4.68
8212 13831 6.282199 TCTCATAGTACCGCTTCTTCTTTT 57.718 37.500 0.00 0.00 0.00 2.27
8244 13863 6.264067 AGCATATAATTTCCCAGTTTCAGCTC 59.736 38.462 0.00 0.00 0.00 4.09
8253 13872 3.306088 CCCAGTTTCAGCTCGAGTAGAAA 60.306 47.826 22.15 22.15 0.00 2.52
8257 13876 3.876274 TTCAGCTCGAGTAGAAATGCT 57.124 42.857 15.13 0.00 0.00 3.79
8264 13884 2.083774 CGAGTAGAAATGCTGCCCAAA 58.916 47.619 0.00 0.00 0.00 3.28
8279 13899 2.604462 GCCCAAATTTGCTAAATGCTCG 59.396 45.455 12.92 0.00 43.37 5.03
8293 13913 2.489938 TGCTCGAAAGGGTTTATGCT 57.510 45.000 0.00 0.00 0.00 3.79
8294 13914 2.356135 TGCTCGAAAGGGTTTATGCTC 58.644 47.619 0.00 0.00 0.00 4.26
8296 13916 2.609916 GCTCGAAAGGGTTTATGCTCTC 59.390 50.000 0.00 0.00 0.00 3.20
8297 13917 3.198872 CTCGAAAGGGTTTATGCTCTCC 58.801 50.000 0.00 0.00 0.00 3.71
8298 13918 2.569853 TCGAAAGGGTTTATGCTCTCCA 59.430 45.455 0.00 0.00 0.00 3.86
8299 13919 2.678336 CGAAAGGGTTTATGCTCTCCAC 59.322 50.000 0.00 0.00 0.00 4.02
8300 13920 3.686016 GAAAGGGTTTATGCTCTCCACA 58.314 45.455 0.00 0.00 0.00 4.17
8301 13921 3.806949 AAGGGTTTATGCTCTCCACAA 57.193 42.857 0.00 0.00 0.00 3.33
8303 13923 4.112634 AGGGTTTATGCTCTCCACAAAA 57.887 40.909 0.00 0.00 0.00 2.44
8304 13924 4.479158 AGGGTTTATGCTCTCCACAAAAA 58.521 39.130 0.00 0.00 0.00 1.94
8353 13990 4.762956 ACTATCTTCCGCTCCGTTATAC 57.237 45.455 0.00 0.00 0.00 1.47
8354 13991 2.701073 ATCTTCCGCTCCGTTATACG 57.299 50.000 0.00 0.00 42.11 3.06
8357 13994 2.287915 TCTTCCGCTCCGTTATACGTAC 59.712 50.000 0.00 0.00 40.58 3.67
8360 13997 1.331756 CCGCTCCGTTATACGTACAGT 59.668 52.381 0.00 0.00 40.58 3.55
8361 13998 2.543848 CCGCTCCGTTATACGTACAGTA 59.456 50.000 0.00 0.00 40.58 2.74
8362 13999 3.535860 CGCTCCGTTATACGTACAGTAC 58.464 50.000 0.00 0.00 40.58 2.73
8363 14000 3.246226 CGCTCCGTTATACGTACAGTACT 59.754 47.826 9.10 0.00 40.58 2.73
8364 14001 4.444388 CGCTCCGTTATACGTACAGTACTA 59.556 45.833 9.10 1.51 40.58 1.82
8549 14187 2.603560 CGGAAAATCAGAGGAAGCGTAC 59.396 50.000 0.00 0.00 0.00 3.67
8550 14188 3.676324 CGGAAAATCAGAGGAAGCGTACT 60.676 47.826 0.00 0.00 0.00 2.73
8552 14190 5.602628 GGAAAATCAGAGGAAGCGTACTAT 58.397 41.667 0.00 0.00 0.00 2.12
8553 14191 5.692654 GGAAAATCAGAGGAAGCGTACTATC 59.307 44.000 0.00 0.00 0.00 2.08
8562 14200 4.332819 AGGAAGCGTACTATCAAAACATGC 59.667 41.667 0.00 0.00 0.00 4.06
8570 14208 5.391312 ACTATCAAAACATGCAACCCTTC 57.609 39.130 0.00 0.00 0.00 3.46
8649 14287 2.103094 GAGACTACATGGCTGTGGCATA 59.897 50.000 6.30 0.00 47.00 3.14
8652 14290 2.239654 ACTACATGGCTGTGGCATAACT 59.760 45.455 6.30 0.00 47.00 2.24
8655 14293 1.402968 CATGGCTGTGGCATAACTGTC 59.597 52.381 6.30 0.00 47.00 3.51
8660 14298 0.774276 TGTGGCATAACTGTCCCCAA 59.226 50.000 0.00 0.00 0.00 4.12
8686 14324 3.508762 CTCCATTTTGCATTCTCACAGC 58.491 45.455 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 6.426328 CCATCTAGCTCTTAATTTGAAGCGAT 59.574 38.462 0.00 0.00 0.00 4.58
18 19 5.489792 TTTTGTCAACTCCATCTAGCTCT 57.510 39.130 0.00 0.00 0.00 4.09
25 26 9.912634 TTTCTAATCAATTTTGTCAACTCCATC 57.087 29.630 0.00 0.00 0.00 3.51
43 44 7.125792 TCCCAGACCTACATCTTTTCTAATC 57.874 40.000 0.00 0.00 0.00 1.75
48 49 4.225267 TCCTTCCCAGACCTACATCTTTTC 59.775 45.833 0.00 0.00 0.00 2.29
58 59 0.413832 TAGCTGTCCTTCCCAGACCT 59.586 55.000 0.00 0.00 33.09 3.85
60 61 0.827368 CCTAGCTGTCCTTCCCAGAC 59.173 60.000 0.00 0.00 34.72 3.51
64 65 1.627297 CCACCCTAGCTGTCCTTCCC 61.627 65.000 0.00 0.00 0.00 3.97
76 77 1.836391 CATGGCCGATTCCACCCTA 59.164 57.895 0.00 0.00 39.25 3.53
104 105 3.320673 ACGAGGGAGTTTTTCTGCTAG 57.679 47.619 0.00 0.00 34.83 3.42
121 122 8.622157 CAGGAAAGTCTTAGTGATATTCTACGA 58.378 37.037 0.00 0.00 0.00 3.43
122 123 7.863375 CCAGGAAAGTCTTAGTGATATTCTACG 59.137 40.741 0.00 0.00 0.00 3.51
123 124 8.915036 TCCAGGAAAGTCTTAGTGATATTCTAC 58.085 37.037 0.00 0.00 0.00 2.59
124 125 9.488762 TTCCAGGAAAGTCTTAGTGATATTCTA 57.511 33.333 0.00 0.00 0.00 2.10
125 126 7.979786 TCCAGGAAAGTCTTAGTGATATTCT 57.020 36.000 0.00 0.00 0.00 2.40
126 127 9.449719 TTTTCCAGGAAAGTCTTAGTGATATTC 57.550 33.333 14.50 0.00 32.93 1.75
127 128 9.807921 TTTTTCCAGGAAAGTCTTAGTGATATT 57.192 29.630 14.50 0.00 32.93 1.28
215 218 8.707839 CAAACCGCAAAATACTTTTCAACATAT 58.292 29.630 0.00 0.00 0.00 1.78
224 227 4.314740 TGAGCAAACCGCAAAATACTTT 57.685 36.364 0.00 0.00 46.13 2.66
235 238 0.240945 AAGGCGATTTGAGCAAACCG 59.759 50.000 5.38 5.38 40.16 4.44
236 239 2.415491 GGTAAGGCGATTTGAGCAAACC 60.415 50.000 0.00 0.00 36.08 3.27
238 241 2.790433 AGGTAAGGCGATTTGAGCAAA 58.210 42.857 0.00 0.00 36.08 3.68
239 242 2.489938 AGGTAAGGCGATTTGAGCAA 57.510 45.000 0.00 0.00 36.08 3.91
257 260 7.011389 TGGCATTACAATCGTAGATGAAGAAAG 59.989 37.037 0.00 0.00 45.12 2.62
269 272 2.023673 CCCACATGGCATTACAATCGT 58.976 47.619 0.00 0.00 0.00 3.73
271 274 4.559300 GCATACCCACATGGCATTACAATC 60.559 45.833 0.00 0.00 37.83 2.67
281 284 2.886523 CAATACCTGCATACCCACATGG 59.113 50.000 0.00 0.00 41.37 3.66
284 287 3.730215 AACAATACCTGCATACCCACA 57.270 42.857 0.00 0.00 0.00 4.17
285 288 4.944930 TGTTAACAATACCTGCATACCCAC 59.055 41.667 5.64 0.00 0.00 4.61
286 289 4.944930 GTGTTAACAATACCTGCATACCCA 59.055 41.667 10.51 0.00 0.00 4.51
287 290 4.944930 TGTGTTAACAATACCTGCATACCC 59.055 41.667 10.51 0.00 31.82 3.69
290 293 5.413213 GTGGTGTGTTAACAATACCTGCATA 59.587 40.000 29.12 15.48 38.27 3.14
293 296 3.364565 CGTGGTGTGTTAACAATACCTGC 60.365 47.826 29.12 23.11 38.27 4.85
297 300 3.881780 TGCGTGGTGTGTTAACAATAC 57.118 42.857 10.51 12.20 38.27 1.89
299 302 4.314740 AATTGCGTGGTGTGTTAACAAT 57.685 36.364 10.51 0.00 38.27 2.71
300 303 3.784701 AATTGCGTGGTGTGTTAACAA 57.215 38.095 10.51 0.00 38.27 2.83
301 304 3.878103 ACTAATTGCGTGGTGTGTTAACA 59.122 39.130 3.59 3.59 0.00 2.41
302 305 4.024725 TGACTAATTGCGTGGTGTGTTAAC 60.025 41.667 0.00 0.00 0.00 2.01
303 306 4.127907 TGACTAATTGCGTGGTGTGTTAA 58.872 39.130 0.00 0.00 0.00 2.01
304 307 3.729966 TGACTAATTGCGTGGTGTGTTA 58.270 40.909 0.00 0.00 0.00 2.41
305 308 2.566913 TGACTAATTGCGTGGTGTGTT 58.433 42.857 0.00 0.00 0.00 3.32
314 317 1.136197 TCGGCGTTTTGACTAATTGCG 60.136 47.619 6.85 0.00 0.00 4.85
329 332 2.928694 AGTAAAAATGCTTTGTCGGCG 58.071 42.857 0.00 0.00 0.00 6.46
330 333 5.005452 CAAAGTAAAAATGCTTTGTCGGC 57.995 39.130 10.12 0.00 43.69 5.54
336 339 6.091441 TGTTTGTCGCAAAGTAAAAATGCTTT 59.909 30.769 5.45 0.00 37.92 3.51
337 340 5.578727 TGTTTGTCGCAAAGTAAAAATGCTT 59.421 32.000 5.45 0.00 37.92 3.91
339 342 5.382573 TGTTTGTCGCAAAGTAAAAATGC 57.617 34.783 5.45 0.00 36.74 3.56
340 343 7.859891 CTTTGTTTGTCGCAAAGTAAAAATG 57.140 32.000 8.98 0.00 44.45 2.32
349 352 2.645730 AGTGCTTTGTTTGTCGCAAA 57.354 40.000 1.63 1.63 33.74 3.68
350 353 3.766676 TTAGTGCTTTGTTTGTCGCAA 57.233 38.095 0.00 0.00 33.74 4.85
351 354 3.766676 TTTAGTGCTTTGTTTGTCGCA 57.233 38.095 0.00 0.00 0.00 5.10
352 355 5.635549 ATTTTTAGTGCTTTGTTTGTCGC 57.364 34.783 0.00 0.00 0.00 5.19
353 356 7.422179 CACAAATTTTTAGTGCTTTGTTTGTCG 59.578 33.333 0.00 0.00 39.19 4.35
354 357 8.439286 TCACAAATTTTTAGTGCTTTGTTTGTC 58.561 29.630 2.97 0.00 39.19 3.18
355 358 8.316640 TCACAAATTTTTAGTGCTTTGTTTGT 57.683 26.923 2.97 0.00 39.19 2.83
356 359 9.049974 GTTCACAAATTTTTAGTGCTTTGTTTG 57.950 29.630 2.97 0.00 39.19 2.93
357 360 8.233868 GGTTCACAAATTTTTAGTGCTTTGTTT 58.766 29.630 2.97 0.00 39.19 2.83
358 361 7.606073 AGGTTCACAAATTTTTAGTGCTTTGTT 59.394 29.630 2.97 0.00 39.19 2.83
359 362 7.102993 AGGTTCACAAATTTTTAGTGCTTTGT 58.897 30.769 2.97 0.00 41.22 2.83
360 363 7.538303 AGGTTCACAAATTTTTAGTGCTTTG 57.462 32.000 2.97 0.00 35.30 2.77
361 364 9.660180 TTTAGGTTCACAAATTTTTAGTGCTTT 57.340 25.926 2.97 0.00 33.44 3.51
362 365 9.830975 ATTTAGGTTCACAAATTTTTAGTGCTT 57.169 25.926 2.97 0.00 33.44 3.91
363 366 9.260002 CATTTAGGTTCACAAATTTTTAGTGCT 57.740 29.630 2.97 0.00 33.44 4.40
364 367 9.255304 TCATTTAGGTTCACAAATTTTTAGTGC 57.745 29.630 2.97 0.00 33.44 4.40
373 376 8.883731 CGATCTAGTTCATTTAGGTTCACAAAT 58.116 33.333 1.89 0.00 0.00 2.32
376 379 7.033791 GTCGATCTAGTTCATTTAGGTTCACA 58.966 38.462 1.89 0.00 0.00 3.58
397 400 5.297547 AGAATTGCTTTACTTGTCAGTCGA 58.702 37.500 0.00 0.00 34.06 4.20
398 401 5.597813 AGAATTGCTTTACTTGTCAGTCG 57.402 39.130 0.00 0.00 34.06 4.18
427 430 5.542635 TGTACCTGAGGAGAAAACACACTAT 59.457 40.000 4.99 0.00 0.00 2.12
435 438 4.382685 CGCCTTATGTACCTGAGGAGAAAA 60.383 45.833 4.99 0.00 31.66 2.29
450 453 5.471797 TCTCTCAGAGAAGATACGCCTTATG 59.528 44.000 0.32 0.00 35.59 1.90
470 473 9.125026 ACATGTACATTTTGAGTTTTCTTCTCT 57.875 29.630 5.37 0.00 33.59 3.10
476 479 7.908193 ACGAACATGTACATTTTGAGTTTTC 57.092 32.000 11.87 0.18 0.00 2.29
589 594 9.423061 CCAAAATTTAGGAAGAAATTGTACTGG 57.577 33.333 0.00 0.00 38.67 4.00
602 607 6.610830 AGGAGTGAAGACCAAAATTTAGGAA 58.389 36.000 0.00 0.00 0.00 3.36
609 614 4.588951 GGGAAAAGGAGTGAAGACCAAAAT 59.411 41.667 0.00 0.00 0.00 1.82
692 731 2.054799 AGCCCTAGTTTGTCTTGGACA 58.945 47.619 0.00 0.00 40.60 4.02
733 772 0.249398 AAATTCGTGGGGAGACGGAG 59.751 55.000 0.00 0.00 39.88 4.63
735 774 1.472728 CCTAAATTCGTGGGGAGACGG 60.473 57.143 0.00 0.00 39.88 4.79
736 775 1.935933 CCTAAATTCGTGGGGAGACG 58.064 55.000 0.00 0.00 40.83 4.18
737 776 1.664873 GCCTAAATTCGTGGGGAGAC 58.335 55.000 0.00 0.00 0.00 3.36
738 777 0.544697 GGCCTAAATTCGTGGGGAGA 59.455 55.000 0.00 0.00 0.00 3.71
739 778 0.546598 AGGCCTAAATTCGTGGGGAG 59.453 55.000 1.29 0.00 0.00 4.30
740 779 1.882308 TAGGCCTAAATTCGTGGGGA 58.118 50.000 10.98 0.00 0.00 4.81
741 780 2.721425 TTAGGCCTAAATTCGTGGGG 57.279 50.000 23.21 0.00 0.00 4.96
769 816 0.251341 GTGTTCTGGGCTGGGATTGT 60.251 55.000 0.00 0.00 0.00 2.71
863 911 2.335316 ACGGCTGGTGAAAGTTGTTA 57.665 45.000 0.00 0.00 0.00 2.41
933 998 9.016243 TGGGGGAGGACAATTATTTATTTAGTA 57.984 33.333 0.00 0.00 0.00 1.82
935 1000 7.232737 GGTGGGGGAGGACAATTATTTATTTAG 59.767 40.741 0.00 0.00 0.00 1.85
966 1033 2.887568 GCGATCTCTGCGGTGGTG 60.888 66.667 0.00 0.00 0.00 4.17
1316 1385 5.917541 TGTTCAATTACAGACCGAACTTC 57.082 39.130 0.00 0.00 37.46 3.01
1317 1386 6.877611 ATTGTTCAATTACAGACCGAACTT 57.122 33.333 0.00 0.00 37.46 2.66
1322 1391 7.484641 CCATACAAATTGTTCAATTACAGACCG 59.515 37.037 3.17 0.00 0.00 4.79
1336 1405 3.181480 GCGTTATGGGCCATACAAATTGT 60.181 43.478 25.60 3.43 0.00 2.71
1343 1412 5.391629 GCTAAATTAGCGTTATGGGCCATAC 60.392 44.000 25.60 18.21 42.62 2.39
1344 1413 4.698304 GCTAAATTAGCGTTATGGGCCATA 59.302 41.667 22.26 22.26 42.62 2.74
1373 1442 9.474313 TCCAAAAAGTAAACCATTATGAGCTAT 57.526 29.630 0.00 0.00 0.00 2.97
1374 1443 8.736244 GTCCAAAAAGTAAACCATTATGAGCTA 58.264 33.333 0.00 0.00 0.00 3.32
1375 1444 7.574967 CGTCCAAAAAGTAAACCATTATGAGCT 60.575 37.037 0.00 0.00 0.00 4.09
1378 1447 7.513371 ACGTCCAAAAAGTAAACCATTATGA 57.487 32.000 0.00 0.00 0.00 2.15
1392 1461 2.512485 TCAGCTCGTACGTCCAAAAA 57.488 45.000 16.05 0.00 0.00 1.94
1396 1465 1.736126 CTACTTCAGCTCGTACGTCCA 59.264 52.381 16.05 0.00 0.00 4.02
1398 1467 3.063725 ACATCTACTTCAGCTCGTACGTC 59.936 47.826 16.05 8.58 0.00 4.34
1401 1470 3.377485 TCCACATCTACTTCAGCTCGTAC 59.623 47.826 0.00 0.00 0.00 3.67
1439 1508 2.378378 AGATCCCGGTCCTTACTACC 57.622 55.000 0.00 0.00 0.00 3.18
1474 1543 5.659440 ATAAGCATCACGGGTCAAAATTT 57.341 34.783 0.00 0.00 0.00 1.82
1516 1585 5.730296 ACTATCGGGGAAATGACTCTATG 57.270 43.478 0.00 0.00 0.00 2.23
1635 1704 2.988010 TGATCTCAACCATTCTCCGG 57.012 50.000 0.00 0.00 0.00 5.14
1640 1709 4.334759 CAGGTCACATGATCTCAACCATTC 59.665 45.833 0.00 0.00 32.11 2.67
1641 1710 4.263639 ACAGGTCACATGATCTCAACCATT 60.264 41.667 0.00 0.00 32.11 3.16
1691 1760 5.888982 TCCTACCCCTTAGCTTCATTAAG 57.111 43.478 0.00 0.00 35.68 1.85
1771 1841 6.384224 TGTGATCTCTTGCAAATGAACAATC 58.616 36.000 0.00 0.53 0.00 2.67
1842 1914 3.047613 GGCGTCGCCTTAAAAACATAG 57.952 47.619 28.98 0.00 46.69 2.23
1861 1933 1.408453 CCCTCCCTAAGGCGGTAAGG 61.408 65.000 0.00 0.00 44.71 2.69
1862 1934 1.408453 CCCCTCCCTAAGGCGGTAAG 61.408 65.000 0.00 0.00 44.71 2.34
1863 1935 1.383525 CCCCTCCCTAAGGCGGTAA 60.384 63.158 0.00 0.00 44.71 2.85
1864 1936 2.284493 CCCCTCCCTAAGGCGGTA 59.716 66.667 0.00 0.00 44.71 4.02
1865 1937 4.817909 CCCCCTCCCTAAGGCGGT 62.818 72.222 0.00 0.00 44.71 5.68
1901 1973 2.830704 AAAGCGTCCCTAAGGCGTCG 62.831 60.000 0.00 0.00 43.57 5.12
1902 1974 0.174162 TAAAGCGTCCCTAAGGCGTC 59.826 55.000 0.00 0.00 43.57 5.19
1903 1975 0.609662 TTAAAGCGTCCCTAAGGCGT 59.390 50.000 0.00 0.00 43.57 5.68
1904 1976 1.729284 TTTAAAGCGTCCCTAAGGCG 58.271 50.000 0.00 0.00 43.57 5.52
1905 1977 3.253921 TGTTTTTAAAGCGTCCCTAAGGC 59.746 43.478 0.00 0.00 39.09 4.35
1906 1978 5.638596 ATGTTTTTAAAGCGTCCCTAAGG 57.361 39.130 0.00 0.00 0.00 2.69
1907 1979 7.333672 ACTCTATGTTTTTAAAGCGTCCCTAAG 59.666 37.037 0.00 0.00 0.00 2.18
1908 1980 7.118680 CACTCTATGTTTTTAAAGCGTCCCTAA 59.881 37.037 0.00 0.00 0.00 2.69
1909 1981 6.592607 CACTCTATGTTTTTAAAGCGTCCCTA 59.407 38.462 0.00 0.00 0.00 3.53
1910 1982 5.411669 CACTCTATGTTTTTAAAGCGTCCCT 59.588 40.000 0.00 0.00 0.00 4.20
1911 1983 5.391629 CCACTCTATGTTTTTAAAGCGTCCC 60.392 44.000 0.00 0.00 0.00 4.46
1912 1984 5.391629 CCCACTCTATGTTTTTAAAGCGTCC 60.392 44.000 0.00 0.00 0.00 4.79
1913 1985 5.410439 TCCCACTCTATGTTTTTAAAGCGTC 59.590 40.000 0.00 0.00 0.00 5.19
1914 1986 5.310451 TCCCACTCTATGTTTTTAAAGCGT 58.690 37.500 0.00 0.00 0.00 5.07
1915 1987 5.873179 TCCCACTCTATGTTTTTAAAGCG 57.127 39.130 0.00 0.00 0.00 4.68
1916 1988 7.391148 TCATCCCACTCTATGTTTTTAAAGC 57.609 36.000 0.00 0.00 0.00 3.51
1917 1989 9.177608 TCATCATCCCACTCTATGTTTTTAAAG 57.822 33.333 0.00 0.00 0.00 1.85
1918 1990 9.177608 CTCATCATCCCACTCTATGTTTTTAAA 57.822 33.333 0.00 0.00 0.00 1.52
1919 1991 7.283127 GCTCATCATCCCACTCTATGTTTTTAA 59.717 37.037 0.00 0.00 0.00 1.52
1920 1992 6.767902 GCTCATCATCCCACTCTATGTTTTTA 59.232 38.462 0.00 0.00 0.00 1.52
1921 1993 5.591877 GCTCATCATCCCACTCTATGTTTTT 59.408 40.000 0.00 0.00 0.00 1.94
1922 1994 5.128919 GCTCATCATCCCACTCTATGTTTT 58.871 41.667 0.00 0.00 0.00 2.43
1923 1995 4.164796 TGCTCATCATCCCACTCTATGTTT 59.835 41.667 0.00 0.00 0.00 2.83
1924 1996 3.713248 TGCTCATCATCCCACTCTATGTT 59.287 43.478 0.00 0.00 0.00 2.71
1925 1997 3.311990 TGCTCATCATCCCACTCTATGT 58.688 45.455 0.00 0.00 0.00 2.29
1926 1998 4.554960 ATGCTCATCATCCCACTCTATG 57.445 45.455 0.00 0.00 0.00 2.23
1927 1999 5.046735 GTGTATGCTCATCATCCCACTCTAT 60.047 44.000 0.00 0.00 35.73 1.98
1928 2000 4.281941 GTGTATGCTCATCATCCCACTCTA 59.718 45.833 0.00 0.00 35.73 2.43
1929 2001 3.070734 GTGTATGCTCATCATCCCACTCT 59.929 47.826 0.00 0.00 35.73 3.24
1930 2002 3.397482 GTGTATGCTCATCATCCCACTC 58.603 50.000 0.00 0.00 35.73 3.51
1940 2012 7.370383 CAAAACAAAAGTAGGTGTATGCTCAT 58.630 34.615 0.00 0.00 0.00 2.90
1948 2020 3.018149 TCGCCAAAACAAAAGTAGGTGT 58.982 40.909 0.00 0.00 0.00 4.16
2002 2077 4.158764 AGAGCACCTTGACTAGACATGTAC 59.841 45.833 0.00 0.00 0.00 2.90
2028 2103 9.177608 TGCTTCAAATAATGCTTTCACTAGTAT 57.822 29.630 0.00 0.00 0.00 2.12
2193 2270 0.318762 AGACAGGAAGCAACTCCGTC 59.681 55.000 12.31 12.31 40.75 4.79
2197 2274 3.733337 TCAGAAAGACAGGAAGCAACTC 58.267 45.455 0.00 0.00 0.00 3.01
2243 2328 3.068024 ACGTTGATGTGGCTTTTTGTCAT 59.932 39.130 0.00 0.00 30.58 3.06
2368 4276 8.306680 TGTAAAATACGGAAGAGAACAAAGAG 57.693 34.615 0.00 0.00 0.00 2.85
2455 4363 1.392589 GGCCCCTACAACATCACATG 58.607 55.000 0.00 0.00 0.00 3.21
2458 4366 0.394352 CTGGGCCCCTACAACATCAC 60.394 60.000 22.27 0.00 0.00 3.06
2473 4381 3.128349 GCAATAGAATGCATTTGCTGGG 58.872 45.455 21.21 9.22 45.70 4.45
2500 4408 4.645535 AGAAATGTGCACTGTAGTCATGT 58.354 39.130 19.41 0.00 0.00 3.21
2581 4489 3.715628 ACATCAGTTTTGTGCTTGACC 57.284 42.857 0.00 0.00 0.00 4.02
2825 4733 4.530388 CAACACAACTGACAGCTATGTTG 58.470 43.478 21.96 21.96 40.68 3.33
2840 4748 2.658373 GCATGATGCATCCAACACAA 57.342 45.000 23.67 3.58 44.26 3.33
2861 4769 7.341805 AGCAACCTGAATATTAAGACAGACAT 58.658 34.615 0.83 0.00 32.90 3.06
2908 4816 3.243367 TGGGTTACATACGTACGCCATAC 60.243 47.826 16.72 6.26 0.00 2.39
2941 4849 2.907458 AGGCAGGGTTGAAAATAGCT 57.093 45.000 0.00 0.00 0.00 3.32
3026 4934 3.495193 CCAGCAAATGAAATCACTCGTG 58.505 45.455 0.00 0.00 0.00 4.35
3053 4961 8.774586 CATGGCTAATTACCAGTTACAACTATC 58.225 37.037 11.00 0.00 41.46 2.08
3061 4969 9.603921 GTTACTAACATGGCTAATTACCAGTTA 57.396 33.333 0.00 14.39 41.46 2.24
3071 4979 5.411361 CAGCACAAGTTACTAACATGGCTAA 59.589 40.000 14.44 0.00 35.78 3.09
3181 5089 4.884164 GGAGGCTCTATGTTTAATGCAACT 59.116 41.667 15.23 0.00 0.00 3.16
3504 5414 2.665165 TGGTGAATGGCAGTTTGAACT 58.335 42.857 0.00 0.00 40.60 3.01
3523 5433 6.936279 ACGGGTCATCTAGTCCATATAAATG 58.064 40.000 0.00 0.00 0.00 2.32
3574 5484 9.733556 TTAAACTATTCTTACTTGATTGGCTCA 57.266 29.630 0.00 0.00 0.00 4.26
3866 5776 5.035443 GCATTTTCTTCTATTGCAGAGCTG 58.965 41.667 0.00 0.00 33.83 4.24
3867 5777 4.703575 TGCATTTTCTTCTATTGCAGAGCT 59.296 37.500 0.00 0.00 38.32 4.09
3868 5778 4.990257 TGCATTTTCTTCTATTGCAGAGC 58.010 39.130 0.00 0.00 38.32 4.09
3877 7310 6.712095 TGCTCTTCTTTCTGCATTTTCTTCTA 59.288 34.615 0.00 0.00 0.00 2.10
3881 7314 5.979288 ATGCTCTTCTTTCTGCATTTTCT 57.021 34.783 0.00 0.00 42.60 2.52
3887 7320 8.424133 TGATTAGTATATGCTCTTCTTTCTGCA 58.576 33.333 0.00 0.00 39.83 4.41
3888 7321 8.824159 TGATTAGTATATGCTCTTCTTTCTGC 57.176 34.615 0.00 0.00 0.00 4.26
3889 7322 9.979578 ACTGATTAGTATATGCTCTTCTTTCTG 57.020 33.333 0.00 0.00 34.74 3.02
3897 7330 8.519526 GCTAGACAACTGATTAGTATATGCTCT 58.480 37.037 0.00 0.00 35.69 4.09
3898 7331 8.519526 AGCTAGACAACTGATTAGTATATGCTC 58.480 37.037 0.00 0.00 35.69 4.26
4243 9070 8.888716 TCGCTAAAATGAGCTAATTAATTCACA 58.111 29.630 3.39 2.04 40.51 3.58
4267 9094 1.003262 CGGGCATTGTTTGTGCTTCG 61.003 55.000 0.00 0.13 42.16 3.79
4432 9281 3.920412 GCAACCAACTTAATGCAGTTAGC 59.080 43.478 0.00 0.00 45.96 3.09
4478 9327 5.351465 TCCTTCTGTTGTTAAGAATCGATGC 59.649 40.000 0.00 0.00 33.34 3.91
4512 9362 5.439721 AGGCTAAGCATTATGAATGACACA 58.560 37.500 3.38 0.00 41.46 3.72
4537 9387 0.618458 TTATTTCCGGTCCAGCTGCT 59.382 50.000 8.66 0.00 0.00 4.24
4538 9388 1.680338 ATTATTTCCGGTCCAGCTGC 58.320 50.000 8.66 0.00 0.00 5.25
4539 9389 4.638421 TGTTTATTATTTCCGGTCCAGCTG 59.362 41.667 6.78 6.78 0.00 4.24
4668 9519 3.493176 GCCATGTTTCTTCTTTGCTGGTT 60.493 43.478 0.00 0.00 0.00 3.67
4997 9884 5.734720 CTCTTGCCCTTGATCAGTACTTTA 58.265 41.667 0.00 0.00 0.00 1.85
5143 10037 9.836864 ATCTTCAATATCAAGTGCTACAATACA 57.163 29.630 0.00 0.00 0.00 2.29
5145 10039 8.777413 GCATCTTCAATATCAAGTGCTACAATA 58.223 33.333 11.00 0.00 31.09 1.90
5147 10041 6.038603 GGCATCTTCAATATCAAGTGCTACAA 59.961 38.462 14.52 0.00 32.77 2.41
5148 10042 5.528690 GGCATCTTCAATATCAAGTGCTACA 59.471 40.000 14.52 0.00 32.77 2.74
5149 10043 5.333645 CGGCATCTTCAATATCAAGTGCTAC 60.334 44.000 14.52 0.00 32.77 3.58
5150 10044 4.751600 CGGCATCTTCAATATCAAGTGCTA 59.248 41.667 14.52 0.00 32.77 3.49
5152 10046 3.561310 TCGGCATCTTCAATATCAAGTGC 59.439 43.478 10.36 10.36 32.06 4.40
5153 10047 4.212847 CCTCGGCATCTTCAATATCAAGTG 59.787 45.833 0.00 0.00 0.00 3.16
5155 10049 4.635223 TCCTCGGCATCTTCAATATCAAG 58.365 43.478 0.00 0.00 0.00 3.02
5156 10050 4.687901 TCCTCGGCATCTTCAATATCAA 57.312 40.909 0.00 0.00 0.00 2.57
5157 10051 4.687901 TTCCTCGGCATCTTCAATATCA 57.312 40.909 0.00 0.00 0.00 2.15
5158 10052 4.816385 TGTTTCCTCGGCATCTTCAATATC 59.184 41.667 0.00 0.00 0.00 1.63
5163 10171 2.559698 TTGTTTCCTCGGCATCTTCA 57.440 45.000 0.00 0.00 0.00 3.02
5171 10179 6.801862 GTCACAATTCTAATTTGTTTCCTCGG 59.198 38.462 0.00 0.00 0.00 4.63
5172 10180 7.359595 TGTCACAATTCTAATTTGTTTCCTCG 58.640 34.615 0.00 0.00 0.00 4.63
5173 10181 8.968242 GTTGTCACAATTCTAATTTGTTTCCTC 58.032 33.333 0.00 0.00 0.00 3.71
5175 10183 8.755018 CAGTTGTCACAATTCTAATTTGTTTCC 58.245 33.333 0.00 0.00 0.00 3.13
5179 10187 8.076178 GCTACAGTTGTCACAATTCTAATTTGT 58.924 33.333 0.00 0.00 0.00 2.83
5182 10190 7.445402 AGTGCTACAGTTGTCACAATTCTAATT 59.555 33.333 0.00 0.00 32.25 1.40
5183 10191 6.936900 AGTGCTACAGTTGTCACAATTCTAAT 59.063 34.615 0.00 0.00 32.25 1.73
5184 10192 6.288294 AGTGCTACAGTTGTCACAATTCTAA 58.712 36.000 0.00 0.00 32.25 2.10
5187 10195 5.007626 TCAAGTGCTACAGTTGTCACAATTC 59.992 40.000 13.30 0.00 43.09 2.17
5188 10196 4.881273 TCAAGTGCTACAGTTGTCACAATT 59.119 37.500 13.30 0.00 43.09 2.32
5189 10197 4.450976 TCAAGTGCTACAGTTGTCACAAT 58.549 39.130 13.30 0.00 43.09 2.71
5191 10199 3.535280 TCAAGTGCTACAGTTGTCACA 57.465 42.857 13.30 0.00 43.09 3.58
5192 10200 6.591834 AGATTATCAAGTGCTACAGTTGTCAC 59.408 38.462 13.30 0.00 43.09 3.67
5193 10201 6.701340 AGATTATCAAGTGCTACAGTTGTCA 58.299 36.000 13.30 2.43 43.09 3.58
5391 10877 3.760035 GCGAGCGACCCTCTGGAA 61.760 66.667 0.00 0.00 38.49 3.53
5537 11047 0.539438 TGTGGGCATCAACCAGAACC 60.539 55.000 0.00 0.00 39.00 3.62
5742 11298 1.304464 TCTGCTTCCTCGAGCCTCA 60.304 57.895 6.99 0.95 42.01 3.86
5757 11313 3.372440 AAAACCCTAGCCAATCCTCTG 57.628 47.619 0.00 0.00 0.00 3.35
5769 11325 1.525941 GGCGTGCAGTAAAAACCCTA 58.474 50.000 0.00 0.00 0.00 3.53
5812 11368 2.655364 CTACAGCGATCGTGGGCG 60.655 66.667 17.81 3.57 39.92 6.13
5824 11380 3.756963 GGTGAAAAAGGGCCTAACTACAG 59.243 47.826 6.41 0.00 0.00 2.74
5900 11456 2.189499 GCTCCATTGGATGACGGGC 61.189 63.158 5.70 1.02 0.00 6.13
5931 11487 1.539496 GGTCGTTGGTTGCTCTGTACA 60.539 52.381 0.00 0.00 0.00 2.90
5962 11518 3.744426 AGTCATACGTTTTTACGCTGCTT 59.256 39.130 0.00 0.00 36.44 3.91
6106 11663 8.916062 TGGATTGTCAATATATTGCAATGTCTT 58.084 29.630 30.94 19.21 40.77 3.01
6107 11664 8.467963 TGGATTGTCAATATATTGCAATGTCT 57.532 30.769 30.94 19.44 40.77 3.41
6136 11693 4.000928 AGGGACTGAGTGAAGACCATAT 57.999 45.455 0.00 0.00 37.18 1.78
6310 11869 1.227999 ACCCGTGTCGCATTGTTCAG 61.228 55.000 0.00 0.00 0.00 3.02
6519 12078 4.516698 CACCATGCATATACCTTCTTGTCC 59.483 45.833 0.00 0.00 0.00 4.02
6539 12098 4.923281 GGTTAAAAACTGATGATGCACACC 59.077 41.667 0.00 0.00 0.00 4.16
6544 12103 6.419413 TGTTTTCGGTTAAAAACTGATGATGC 59.581 34.615 12.01 0.00 45.61 3.91
6706 12268 2.821969 GCTGATCAAGGACACACCAAAT 59.178 45.455 0.00 0.00 42.04 2.32
6749 12311 3.119637 CCACCGGTTAAATGCCTACAAAG 60.120 47.826 2.97 0.00 0.00 2.77
6829 12391 4.095483 GTGACCAGGATTAGCAAAGTCATG 59.905 45.833 0.00 0.00 35.45 3.07
6867 12429 5.537674 AGCAAATCCAATATCAAGGATGGAC 59.462 40.000 5.38 0.26 43.67 4.02
6885 12447 4.018960 AGACTCACCATAAGTCCAGCAAAT 60.019 41.667 0.00 0.00 43.41 2.32
6916 12478 9.883142 ATCTAGTCTAAGAATGGAAGACAAAAG 57.117 33.333 4.69 0.17 41.69 2.27
7005 12568 6.378710 TGACAAAACGTTAACATGGATTCA 57.621 33.333 0.00 0.00 0.00 2.57
7006 12569 7.807907 AGAATGACAAAACGTTAACATGGATTC 59.192 33.333 0.00 10.40 0.00 2.52
7018 12581 9.436957 AGAACTATCAATAGAATGACAAAACGT 57.563 29.630 4.07 0.00 34.50 3.99
7189 12755 4.668138 ATACCCTAAGGCCTGTTTTGAA 57.332 40.909 5.69 0.00 36.11 2.69
7190 12756 4.668138 AATACCCTAAGGCCTGTTTTGA 57.332 40.909 5.69 0.00 36.11 2.69
7191 12757 6.605594 TCATAAATACCCTAAGGCCTGTTTTG 59.394 38.462 5.69 0.00 36.11 2.44
7192 12758 6.737608 TCATAAATACCCTAAGGCCTGTTTT 58.262 36.000 5.69 6.24 36.11 2.43
7193 12759 6.069029 ACTCATAAATACCCTAAGGCCTGTTT 60.069 38.462 5.69 0.00 36.11 2.83
7194 12760 5.432060 ACTCATAAATACCCTAAGGCCTGTT 59.568 40.000 5.69 0.00 36.11 3.16
7195 12761 4.975794 ACTCATAAATACCCTAAGGCCTGT 59.024 41.667 5.69 1.34 36.11 4.00
7263 12829 4.155063 TGTACATAATGCAGGCACAGAT 57.845 40.909 0.00 0.00 0.00 2.90
7315 12881 8.960591 TGGAGAATTGATGAAAAATAGGAGAAC 58.039 33.333 0.00 0.00 0.00 3.01
7501 13067 5.731591 ACTACCAACTACAACCAGAATAGC 58.268 41.667 0.00 0.00 0.00 2.97
7533 13099 6.499106 ACCTGGAAATTTTTGGAAACAGAT 57.501 33.333 0.00 0.00 44.54 2.90
7734 13300 4.466370 CACTAATACACCCTCCTCTGAACA 59.534 45.833 0.00 0.00 0.00 3.18
7737 13303 4.023980 CACACTAATACACCCTCCTCTGA 58.976 47.826 0.00 0.00 0.00 3.27
7738 13304 3.769844 ACACACTAATACACCCTCCTCTG 59.230 47.826 0.00 0.00 0.00 3.35
7814 13387 0.108233 TTATGTACCGCGGACAACCC 60.108 55.000 35.90 12.51 0.00 4.11
7839 13412 4.137543 CCAATGTTGGCTATCTCCTAACC 58.862 47.826 0.00 0.00 42.21 2.85
7884 13459 3.512724 TCACCAACTTACCTACAGGCTAC 59.487 47.826 0.00 0.00 39.32 3.58
7927 13502 2.165319 AAGAAGTACAACACGAGGGC 57.835 50.000 0.00 0.00 0.00 5.19
7933 13509 8.819643 AGATGAGTTCTTAAGAAGTACAACAC 57.180 34.615 22.61 11.54 37.79 3.32
7947 13523 3.429547 CCGAACCGATGAGATGAGTTCTT 60.430 47.826 0.00 0.00 33.74 2.52
7955 13531 0.174845 TTTCGCCGAACCGATGAGAT 59.825 50.000 0.00 0.00 37.06 2.75
7967 13543 1.135859 AGTACGTAGTCAGTTTCGCCG 60.136 52.381 0.00 0.00 43.93 6.46
8045 13663 8.166422 ACAAGGGACAGTTTTCTTGTTATAAG 57.834 34.615 9.81 0.00 44.88 1.73
8060 13678 4.204012 TCCAAAGTACAAACAAGGGACAG 58.796 43.478 0.00 0.00 0.00 3.51
8063 13681 6.785076 TCATATCCAAAGTACAAACAAGGGA 58.215 36.000 0.00 0.00 0.00 4.20
8086 13704 8.708742 GTCAAGTGGCCAAAAAGTAAATTATTC 58.291 33.333 7.24 0.00 0.00 1.75
8087 13705 8.428852 AGTCAAGTGGCCAAAAAGTAAATTATT 58.571 29.630 7.24 0.00 0.00 1.40
8091 13710 5.600696 CAGTCAAGTGGCCAAAAAGTAAAT 58.399 37.500 7.24 0.00 0.00 1.40
8094 13713 2.360801 GCAGTCAAGTGGCCAAAAAGTA 59.639 45.455 7.24 0.00 0.00 2.24
8122 13741 5.009010 GTCATGACTTCACAATTGTTGGACT 59.991 40.000 18.83 0.00 34.12 3.85
8166 13785 9.841880 GAGAACCCAAATCTACAAGTTAAAATC 57.158 33.333 0.00 0.00 0.00 2.17
8171 13790 8.822805 ACTATGAGAACCCAAATCTACAAGTTA 58.177 33.333 0.00 0.00 0.00 2.24
8179 13798 4.443034 GCGGTACTATGAGAACCCAAATCT 60.443 45.833 0.00 0.00 0.00 2.40
8180 13799 3.808174 GCGGTACTATGAGAACCCAAATC 59.192 47.826 0.00 0.00 0.00 2.17
8181 13800 3.454812 AGCGGTACTATGAGAACCCAAAT 59.545 43.478 0.00 0.00 0.00 2.32
8219 13838 6.131961 AGCTGAAACTGGGAAATTATATGCT 58.868 36.000 0.00 0.00 0.00 3.79
8231 13850 1.819288 TCTACTCGAGCTGAAACTGGG 59.181 52.381 13.61 0.00 0.00 4.45
8244 13863 1.737838 TTGGGCAGCATTTCTACTCG 58.262 50.000 0.00 0.00 0.00 4.18
8253 13872 3.699411 TTTAGCAAATTTGGGCAGCAT 57.301 38.095 19.47 0.00 0.00 3.79
8279 13899 3.686016 TGTGGAGAGCATAAACCCTTTC 58.314 45.455 0.00 0.00 0.00 2.62
8329 13966 2.345124 ACGGAGCGGAAGATAGTAGT 57.655 50.000 0.00 0.00 0.00 2.73
8370 14007 0.813610 TCCGCTGTGTGGTCTGTTTG 60.814 55.000 0.00 0.00 34.40 2.93
8549 14187 4.463891 AGGAAGGGTTGCATGTTTTGATAG 59.536 41.667 0.00 0.00 0.00 2.08
8550 14188 4.220382 CAGGAAGGGTTGCATGTTTTGATA 59.780 41.667 0.00 0.00 0.00 2.15
8552 14190 2.364970 CAGGAAGGGTTGCATGTTTTGA 59.635 45.455 0.00 0.00 0.00 2.69
8553 14191 2.758009 CAGGAAGGGTTGCATGTTTTG 58.242 47.619 0.00 0.00 0.00 2.44
8562 14200 2.431954 ATGATGAGCAGGAAGGGTTG 57.568 50.000 0.00 0.00 0.00 3.77
8649 14287 1.786441 TGGAGGAAATTGGGGACAGTT 59.214 47.619 0.00 0.00 42.74 3.16
8652 14290 3.558608 AAATGGAGGAAATTGGGGACA 57.441 42.857 0.00 0.00 39.83 4.02
8655 14293 2.305343 TGCAAAATGGAGGAAATTGGGG 59.695 45.455 0.00 0.00 0.00 4.96
8660 14298 5.246656 TGTGAGAATGCAAAATGGAGGAAAT 59.753 36.000 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.