Multiple sequence alignment - TraesCS7A01G158600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G158600 chr7A 100.000 3266 0 0 1 3266 114019033 114022298 0.000000e+00 6032.0
1 TraesCS7A01G158600 chr7A 90.329 941 38 22 1716 2617 113626600 113627526 0.000000e+00 1184.0
2 TraesCS7A01G158600 chr7A 80.410 781 85 37 953 1715 113626178 113626908 1.730000e-147 532.0
3 TraesCS7A01G158600 chr7A 90.370 405 27 5 2617 3010 113628471 113628874 3.730000e-144 521.0
4 TraesCS7A01G158600 chr7A 98.008 251 4 1 443 693 191718935 191718686 5.000000e-118 435.0
5 TraesCS7A01G158600 chr7A 96.787 249 6 2 443 690 563260086 563259839 6.520000e-112 414.0
6 TraesCS7A01G158600 chr7A 89.170 277 18 8 129 393 113625542 113625818 5.220000e-88 335.0
7 TraesCS7A01G158600 chr7D 86.999 1023 67 24 1737 2706 109007331 109008340 0.000000e+00 1092.0
8 TraesCS7A01G158600 chr7D 87.188 640 69 6 1085 1715 109007001 109007636 0.000000e+00 715.0
9 TraesCS7A01G158600 chr7D 89.846 325 19 7 94 405 109006318 109006641 3.920000e-109 405.0
10 TraesCS7A01G158600 chr7D 84.274 248 37 2 443 690 107489334 107489579 1.170000e-59 241.0
11 TraesCS7A01G158600 chr7D 93.443 61 3 1 953 1012 109006856 109006916 4.490000e-14 89.8
12 TraesCS7A01G158600 chr7D 89.655 58 6 0 2704 2761 109008560 109008617 1.260000e-09 75.0
13 TraesCS7A01G158600 chr7D 100.000 29 0 0 14 42 61758781 61758809 2.000000e-03 54.7
14 TraesCS7A01G158600 chr7B 88.924 641 61 3 1085 1715 67948541 67949181 0.000000e+00 782.0
15 TraesCS7A01G158600 chr7B 81.785 829 61 19 1735 2486 67948869 67949684 2.150000e-171 612.0
16 TraesCS7A01G158600 chr7B 87.917 240 11 11 724 957 67948152 67948379 1.930000e-67 267.0
17 TraesCS7A01G158600 chr7B 86.036 222 19 7 2487 2706 67949731 67949942 9.120000e-56 228.0
18 TraesCS7A01G158600 chr7B 91.667 156 10 1 181 333 67947925 67948080 2.550000e-51 213.0
19 TraesCS7A01G158600 chr7B 89.209 139 12 1 2704 2839 67950165 67950303 1.560000e-38 171.0
20 TraesCS7A01G158600 chrUn 88.612 641 63 3 1085 1715 85100164 85100804 0.000000e+00 771.0
21 TraesCS7A01G158600 chrUn 82.030 729 54 14 1735 2386 85100492 85101220 1.710000e-152 549.0
22 TraesCS7A01G158600 chrUn 92.042 377 30 0 1085 1461 249236254 249235878 6.200000e-147 531.0
23 TraesCS7A01G158600 chrUn 83.784 407 34 6 2012 2386 375804634 375805040 1.110000e-94 357.0
24 TraesCS7A01G158600 chrUn 85.761 309 12 14 724 1012 249236635 249236339 6.850000e-77 298.0
25 TraesCS7A01G158600 chrUn 85.305 279 15 14 693 957 85099726 85099992 6.950000e-67 265.0
26 TraesCS7A01G158600 chrUn 86.937 222 21 6 2487 2706 85101381 85101596 3.260000e-60 243.0
27 TraesCS7A01G158600 chrUn 86.486 222 20 7 2487 2706 375805201 375805414 5.450000e-58 235.0
28 TraesCS7A01G158600 chrUn 91.667 156 10 1 181 333 249236862 249236707 2.550000e-51 213.0
29 TraesCS7A01G158600 chrUn 91.026 156 11 1 181 333 85099540 85099695 1.190000e-49 207.0
30 TraesCS7A01G158600 chrUn 88.462 130 12 1 2704 2830 375805637 375805766 1.570000e-33 154.0
31 TraesCS7A01G158600 chrUn 87.692 130 13 1 2704 2830 85101819 85101948 7.300000e-32 148.0
32 TraesCS7A01G158600 chrUn 95.181 83 4 0 1928 2010 375804520 375804602 7.350000e-27 132.0
33 TraesCS7A01G158600 chrUn 100.000 29 0 0 14 42 22220067 22220039 2.000000e-03 54.7
34 TraesCS7A01G158600 chr4B 98.387 248 4 0 443 690 637590699 637590452 1.390000e-118 436.0
35 TraesCS7A01G158600 chr4B 90.769 260 21 3 3010 3266 646151429 646151170 8.680000e-91 344.0
36 TraesCS7A01G158600 chr6B 96.774 248 8 0 443 690 346140854 346140607 6.520000e-112 414.0
37 TraesCS7A01G158600 chr6B 100.000 30 0 0 14 43 417228112 417228141 4.550000e-04 56.5
38 TraesCS7A01G158600 chr6A 96.774 248 8 0 443 690 26950054 26949807 6.520000e-112 414.0
39 TraesCS7A01G158600 chr5B 95.968 248 10 0 443 690 129288552 129288799 1.410000e-108 403.0
40 TraesCS7A01G158600 chr5B 100.000 29 0 0 14 42 611950973 611950945 2.000000e-03 54.7
41 TraesCS7A01G158600 chr1B 95.219 251 2 1 443 693 411560712 411560472 3.950000e-104 388.0
42 TraesCS7A01G158600 chr1B 86.957 69 6 3 623 690 90878525 90878459 1.260000e-09 75.0
43 TraesCS7A01G158600 chr5D 91.860 258 20 1 3010 3266 422487023 422487280 3.100000e-95 359.0
44 TraesCS7A01G158600 chr5D 91.473 258 21 1 3010 3266 362004188 362004445 1.440000e-93 353.0
45 TraesCS7A01G158600 chr3D 91.829 257 21 0 3010 3266 288703106 288702850 3.100000e-95 359.0
46 TraesCS7A01G158600 chr3D 91.045 67 5 1 624 690 70240849 70240914 4.490000e-14 89.8
47 TraesCS7A01G158600 chr2A 91.829 257 20 1 3010 3266 323600201 323600456 1.110000e-94 357.0
48 TraesCS7A01G158600 chr4A 91.085 258 21 2 3010 3266 537461220 537461476 6.710000e-92 348.0
49 TraesCS7A01G158600 chr2D 91.085 258 22 1 3010 3266 288327109 288327366 6.710000e-92 348.0
50 TraesCS7A01G158600 chr2D 100.000 29 0 0 14 42 632558822 632558794 2.000000e-03 54.7
51 TraesCS7A01G158600 chr5A 91.339 254 19 3 3004 3254 475330534 475330787 8.680000e-91 344.0
52 TraesCS7A01G158600 chr5A 100.000 31 0 0 14 44 673184463 673184433 1.270000e-04 58.4
53 TraesCS7A01G158600 chr4D 89.630 270 23 4 3002 3266 440873664 440873933 4.040000e-89 339.0
54 TraesCS7A01G158600 chr1D 100.000 30 0 0 16 45 435360862 435360833 4.550000e-04 56.5
55 TraesCS7A01G158600 chr2B 100.000 29 0 0 14 42 691995965 691995937 2.000000e-03 54.7
56 TraesCS7A01G158600 chr2B 100.000 29 0 0 14 42 692037327 692037299 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G158600 chr7A 114019033 114022298 3265 False 6032.000000 6032 100.000000 1 3266 1 chr7A.!!$F1 3265
1 TraesCS7A01G158600 chr7A 113625542 113628874 3332 False 643.000000 1184 87.569750 129 3010 4 chr7A.!!$F2 2881
2 TraesCS7A01G158600 chr7D 109006318 109008617 2299 False 475.360000 1092 89.426200 94 2761 5 chr7D.!!$F3 2667
3 TraesCS7A01G158600 chr7B 67947925 67950303 2378 False 378.833333 782 87.589667 181 2839 6 chr7B.!!$F1 2658
4 TraesCS7A01G158600 chrUn 85099540 85101948 2408 False 363.833333 771 86.933667 181 2830 6 chrUn.!!$F1 2649
5 TraesCS7A01G158600 chrUn 249235878 249236862 984 True 347.333333 531 89.823333 181 1461 3 chrUn.!!$R2 1280
6 TraesCS7A01G158600 chrUn 375804520 375805766 1246 False 219.500000 357 88.478250 1928 2830 4 chrUn.!!$F2 902

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
885 939 0.108377 ATGTAGTTGTGCGCGGATCA 60.108 50.0 8.83 3.19 0.00 2.92 F
1434 1746 0.035056 GAGTTGGTGCTGGTGGCTAT 60.035 55.0 0.00 0.00 42.39 2.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1691 2003 0.043485 TGGTGCTGGTACCCTCCATA 59.957 55.0 10.07 0.0 40.09 2.74 R
2898 4581 0.439985 CAAGATCCGTCACACAAGCG 59.560 55.0 0.00 0.0 0.00 4.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.763651 GCTATCACCGGCGAAAACT 58.236 52.632 9.30 0.00 0.00 2.66
19 20 1.084289 GCTATCACCGGCGAAAACTT 58.916 50.000 9.30 0.00 0.00 2.66
20 21 2.273557 GCTATCACCGGCGAAAACTTA 58.726 47.619 9.30 0.00 0.00 2.24
21 22 2.870411 GCTATCACCGGCGAAAACTTAT 59.130 45.455 9.30 0.00 0.00 1.73
22 23 4.053295 GCTATCACCGGCGAAAACTTATA 58.947 43.478 9.30 0.00 0.00 0.98
23 24 4.689345 GCTATCACCGGCGAAAACTTATAT 59.311 41.667 9.30 0.00 0.00 0.86
24 25 5.178809 GCTATCACCGGCGAAAACTTATATT 59.821 40.000 9.30 0.00 0.00 1.28
25 26 6.293244 GCTATCACCGGCGAAAACTTATATTT 60.293 38.462 9.30 0.00 0.00 1.40
26 27 7.095523 GCTATCACCGGCGAAAACTTATATTTA 60.096 37.037 9.30 0.00 0.00 1.40
27 28 6.592798 TCACCGGCGAAAACTTATATTTAG 57.407 37.500 9.30 0.00 0.00 1.85
28 29 6.339730 TCACCGGCGAAAACTTATATTTAGA 58.660 36.000 9.30 0.00 0.00 2.10
29 30 6.817641 TCACCGGCGAAAACTTATATTTAGAA 59.182 34.615 9.30 0.00 0.00 2.10
30 31 7.333921 TCACCGGCGAAAACTTATATTTAGAAA 59.666 33.333 9.30 0.00 0.00 2.52
31 32 7.427318 CACCGGCGAAAACTTATATTTAGAAAC 59.573 37.037 9.30 0.00 0.00 2.78
32 33 7.119553 ACCGGCGAAAACTTATATTTAGAAACA 59.880 33.333 9.30 0.00 0.00 2.83
33 34 7.638683 CCGGCGAAAACTTATATTTAGAAACAG 59.361 37.037 9.30 0.00 0.00 3.16
34 35 8.385111 CGGCGAAAACTTATATTTAGAAACAGA 58.615 33.333 0.00 0.00 0.00 3.41
35 36 9.704098 GGCGAAAACTTATATTTAGAAACAGAG 57.296 33.333 0.00 0.00 0.00 3.35
36 37 9.704098 GCGAAAACTTATATTTAGAAACAGAGG 57.296 33.333 0.00 0.00 0.00 3.69
47 48 8.608844 ATTTAGAAACAGAGGAAGTAGTTGTG 57.391 34.615 0.00 0.00 0.00 3.33
48 49 4.381411 AGAAACAGAGGAAGTAGTTGTGC 58.619 43.478 0.00 0.00 0.00 4.57
49 50 3.838244 AACAGAGGAAGTAGTTGTGCA 57.162 42.857 0.00 0.00 0.00 4.57
50 51 3.113260 ACAGAGGAAGTAGTTGTGCAC 57.887 47.619 10.75 10.75 0.00 4.57
51 52 2.061773 CAGAGGAAGTAGTTGTGCACG 58.938 52.381 13.13 0.00 0.00 5.34
52 53 0.790814 GAGGAAGTAGTTGTGCACGC 59.209 55.000 13.13 7.76 0.00 5.34
53 54 0.393077 AGGAAGTAGTTGTGCACGCT 59.607 50.000 13.13 14.97 0.00 5.07
54 55 1.202651 AGGAAGTAGTTGTGCACGCTT 60.203 47.619 17.00 12.80 0.00 4.68
55 56 1.602377 GGAAGTAGTTGTGCACGCTTT 59.398 47.619 17.00 8.10 0.00 3.51
56 57 2.803956 GGAAGTAGTTGTGCACGCTTTA 59.196 45.455 17.00 3.08 0.00 1.85
57 58 3.120649 GGAAGTAGTTGTGCACGCTTTAG 60.121 47.826 17.00 0.00 0.00 1.85
58 59 3.107642 AGTAGTTGTGCACGCTTTAGT 57.892 42.857 17.00 5.73 0.00 2.24
59 60 4.247267 AGTAGTTGTGCACGCTTTAGTA 57.753 40.909 17.00 3.39 0.00 1.82
60 61 4.817517 AGTAGTTGTGCACGCTTTAGTAT 58.182 39.130 17.00 0.00 0.00 2.12
61 62 5.235516 AGTAGTTGTGCACGCTTTAGTATT 58.764 37.500 17.00 0.96 0.00 1.89
62 63 5.699458 AGTAGTTGTGCACGCTTTAGTATTT 59.301 36.000 17.00 0.00 0.00 1.40
63 64 6.869913 AGTAGTTGTGCACGCTTTAGTATTTA 59.130 34.615 17.00 0.00 0.00 1.40
64 65 5.923665 AGTTGTGCACGCTTTAGTATTTAC 58.076 37.500 13.13 0.00 0.00 2.01
65 66 5.467399 AGTTGTGCACGCTTTAGTATTTACA 59.533 36.000 13.13 0.00 0.00 2.41
66 67 5.926214 TGTGCACGCTTTAGTATTTACAA 57.074 34.783 13.13 0.00 0.00 2.41
67 68 5.922546 TGTGCACGCTTTAGTATTTACAAG 58.077 37.500 13.13 0.00 0.00 3.16
68 69 5.697178 TGTGCACGCTTTAGTATTTACAAGA 59.303 36.000 13.13 0.00 0.00 3.02
69 70 6.370442 TGTGCACGCTTTAGTATTTACAAGAT 59.630 34.615 13.13 0.00 0.00 2.40
70 71 7.094975 TGTGCACGCTTTAGTATTTACAAGATT 60.095 33.333 13.13 0.00 0.00 2.40
71 72 7.216317 GTGCACGCTTTAGTATTTACAAGATTG 59.784 37.037 0.00 0.00 0.00 2.67
72 73 7.118535 TGCACGCTTTAGTATTTACAAGATTGA 59.881 33.333 0.00 0.00 0.00 2.57
73 74 7.636359 GCACGCTTTAGTATTTACAAGATTGAG 59.364 37.037 0.00 0.00 0.00 3.02
74 75 8.656849 CACGCTTTAGTATTTACAAGATTGAGT 58.343 33.333 0.00 0.00 0.00 3.41
75 76 9.865321 ACGCTTTAGTATTTACAAGATTGAGTA 57.135 29.630 0.00 0.00 0.00 2.59
84 85 8.662781 ATTTACAAGATTGAGTATATGTGCGT 57.337 30.769 0.00 0.00 0.00 5.24
85 86 9.758651 ATTTACAAGATTGAGTATATGTGCGTA 57.241 29.630 0.00 0.00 0.00 4.42
86 87 9.758651 TTTACAAGATTGAGTATATGTGCGTAT 57.241 29.630 0.00 0.00 0.00 3.06
168 169 1.949525 CCCAACAAGTCAGTCAGGTTG 59.050 52.381 0.00 0.00 38.76 3.77
169 170 1.334869 CCAACAAGTCAGTCAGGTTGC 59.665 52.381 0.00 0.00 37.96 4.17
170 171 2.016318 CAACAAGTCAGTCAGGTTGCA 58.984 47.619 0.00 0.00 33.36 4.08
171 172 1.668419 ACAAGTCAGTCAGGTTGCAC 58.332 50.000 0.00 0.00 0.00 4.57
172 173 0.583438 CAAGTCAGTCAGGTTGCACG 59.417 55.000 0.00 0.00 0.00 5.34
174 175 1.069090 GTCAGTCAGGTTGCACGGA 59.931 57.895 0.00 0.00 0.00 4.69
215 218 3.327757 CCTATAAATAGCTGGGCAGTCCA 59.672 47.826 0.00 0.00 44.79 4.02
218 221 1.216064 AATAGCTGGGCAGTCCATCA 58.784 50.000 0.00 0.00 46.01 3.07
246 256 1.675641 CAACAGCTTCTTCCCCGGG 60.676 63.158 15.80 15.80 0.00 5.73
294 304 3.829886 TCGGTACAACAAGGTACTACG 57.170 47.619 0.00 0.00 42.53 3.51
298 308 0.322648 ACAACAAGGTACTACGGGCC 59.677 55.000 0.00 0.00 38.49 5.80
300 310 0.611714 AACAAGGTACTACGGGCCTG 59.388 55.000 11.02 11.02 38.49 4.85
351 364 8.527567 TGGCTTTATTTATTTTTCTGTTTCCG 57.472 30.769 0.00 0.00 0.00 4.30
467 485 9.931210 ATATTAGTTGTTAGCACGAAAATTAGC 57.069 29.630 0.00 0.00 0.00 3.09
468 486 4.708601 AGTTGTTAGCACGAAAATTAGCG 58.291 39.130 0.00 0.00 0.00 4.26
469 487 3.111958 TGTTAGCACGAAAATTAGCGC 57.888 42.857 0.00 0.00 0.00 5.92
470 488 2.480802 TGTTAGCACGAAAATTAGCGCA 59.519 40.909 11.47 0.00 0.00 6.09
471 489 3.091417 GTTAGCACGAAAATTAGCGCAG 58.909 45.455 11.47 0.00 0.00 5.18
472 490 1.438651 AGCACGAAAATTAGCGCAGA 58.561 45.000 11.47 0.00 0.00 4.26
473 491 1.394917 AGCACGAAAATTAGCGCAGAG 59.605 47.619 11.47 0.00 0.00 3.35
474 492 1.128692 GCACGAAAATTAGCGCAGAGT 59.871 47.619 11.47 0.00 0.00 3.24
475 493 2.784665 GCACGAAAATTAGCGCAGAGTC 60.785 50.000 11.47 0.00 0.00 3.36
476 494 2.411748 CACGAAAATTAGCGCAGAGTCA 59.588 45.455 11.47 0.00 0.00 3.41
477 495 2.668457 ACGAAAATTAGCGCAGAGTCAG 59.332 45.455 11.47 0.00 0.00 3.51
478 496 2.668457 CGAAAATTAGCGCAGAGTCAGT 59.332 45.455 11.47 0.00 0.00 3.41
479 497 3.123621 CGAAAATTAGCGCAGAGTCAGTT 59.876 43.478 11.47 0.00 0.00 3.16
480 498 4.326278 CGAAAATTAGCGCAGAGTCAGTTA 59.674 41.667 11.47 0.00 0.00 2.24
481 499 5.532025 AAAATTAGCGCAGAGTCAGTTAC 57.468 39.130 11.47 0.00 0.00 2.50
482 500 2.257974 TTAGCGCAGAGTCAGTTACG 57.742 50.000 11.47 0.00 0.00 3.18
483 501 1.162698 TAGCGCAGAGTCAGTTACGT 58.837 50.000 11.47 0.00 0.00 3.57
484 502 0.387367 AGCGCAGAGTCAGTTACGTG 60.387 55.000 11.47 0.00 0.00 4.49
485 503 0.386858 GCGCAGAGTCAGTTACGTGA 60.387 55.000 0.30 0.00 0.00 4.35
486 504 1.607713 CGCAGAGTCAGTTACGTGAG 58.392 55.000 0.00 0.00 0.00 3.51
487 505 1.341606 GCAGAGTCAGTTACGTGAGC 58.658 55.000 0.00 0.00 0.00 4.26
488 506 1.335964 GCAGAGTCAGTTACGTGAGCA 60.336 52.381 0.00 0.00 0.00 4.26
489 507 2.862530 GCAGAGTCAGTTACGTGAGCAA 60.863 50.000 0.00 0.00 0.00 3.91
490 508 3.381045 CAGAGTCAGTTACGTGAGCAAA 58.619 45.455 0.00 0.00 0.00 3.68
491 509 3.990469 CAGAGTCAGTTACGTGAGCAAAT 59.010 43.478 0.00 0.00 0.00 2.32
492 510 4.090642 CAGAGTCAGTTACGTGAGCAAATC 59.909 45.833 0.00 0.00 0.00 2.17
493 511 2.987149 AGTCAGTTACGTGAGCAAATCG 59.013 45.455 0.00 0.00 0.00 3.34
494 512 1.724623 TCAGTTACGTGAGCAAATCGC 59.275 47.619 0.00 0.00 42.91 4.58
495 513 1.459209 CAGTTACGTGAGCAAATCGCA 59.541 47.619 0.00 0.00 46.13 5.10
496 514 1.459592 AGTTACGTGAGCAAATCGCAC 59.540 47.619 0.00 0.00 46.13 5.34
500 518 1.421485 GTGAGCAAATCGCACGAGG 59.579 57.895 0.00 0.00 46.13 4.63
501 519 1.741401 TGAGCAAATCGCACGAGGG 60.741 57.895 0.00 0.00 46.13 4.30
502 520 1.447838 GAGCAAATCGCACGAGGGA 60.448 57.895 1.50 1.50 46.13 4.20
503 521 1.424493 GAGCAAATCGCACGAGGGAG 61.424 60.000 5.76 0.00 46.13 4.30
504 522 3.093278 CAAATCGCACGAGGGAGC 58.907 61.111 5.76 0.00 40.30 4.70
505 523 2.125106 AAATCGCACGAGGGAGCC 60.125 61.111 5.76 0.00 40.30 4.70
506 524 2.954684 AAATCGCACGAGGGAGCCA 61.955 57.895 5.76 0.00 40.30 4.75
507 525 2.257409 AAATCGCACGAGGGAGCCAT 62.257 55.000 5.76 0.00 40.30 4.40
508 526 2.650813 AATCGCACGAGGGAGCCATC 62.651 60.000 5.76 0.00 40.30 3.51
509 527 4.899239 CGCACGAGGGAGCCATCC 62.899 72.222 0.00 0.00 45.85 3.51
517 535 4.147701 GGAGCCATCCACGATTGG 57.852 61.111 0.00 0.00 45.87 3.16
532 550 6.595772 CACGATTGGAGATAGAAAAGGAAG 57.404 41.667 0.00 0.00 0.00 3.46
533 551 5.525378 CACGATTGGAGATAGAAAAGGAAGG 59.475 44.000 0.00 0.00 0.00 3.46
534 552 4.513318 CGATTGGAGATAGAAAAGGAAGGC 59.487 45.833 0.00 0.00 0.00 4.35
535 553 4.927267 TTGGAGATAGAAAAGGAAGGCA 57.073 40.909 0.00 0.00 0.00 4.75
536 554 5.456921 TTGGAGATAGAAAAGGAAGGCAT 57.543 39.130 0.00 0.00 0.00 4.40
537 555 4.785301 TGGAGATAGAAAAGGAAGGCATG 58.215 43.478 0.00 0.00 0.00 4.06
538 556 3.567585 GGAGATAGAAAAGGAAGGCATGC 59.432 47.826 9.90 9.90 0.00 4.06
539 557 4.202441 GAGATAGAAAAGGAAGGCATGCA 58.798 43.478 21.36 0.00 0.00 3.96
540 558 4.801164 AGATAGAAAAGGAAGGCATGCAT 58.199 39.130 21.36 10.32 0.00 3.96
541 559 4.583489 AGATAGAAAAGGAAGGCATGCATG 59.417 41.667 22.70 22.70 0.00 4.06
542 560 2.811410 AGAAAAGGAAGGCATGCATGA 58.189 42.857 30.64 0.00 0.00 3.07
543 561 3.371965 AGAAAAGGAAGGCATGCATGAT 58.628 40.909 30.64 14.73 0.00 2.45
544 562 3.773119 AGAAAAGGAAGGCATGCATGATT 59.227 39.130 30.64 22.06 0.00 2.57
545 563 4.224370 AGAAAAGGAAGGCATGCATGATTT 59.776 37.500 30.64 21.24 0.00 2.17
546 564 3.536956 AAGGAAGGCATGCATGATTTG 57.463 42.857 30.64 5.23 0.00 2.32
547 565 1.760613 AGGAAGGCATGCATGATTTGG 59.239 47.619 30.64 2.65 0.00 3.28
548 566 1.202604 GGAAGGCATGCATGATTTGGG 60.203 52.381 30.64 1.83 0.00 4.12
549 567 1.483415 GAAGGCATGCATGATTTGGGT 59.517 47.619 30.64 6.99 0.00 4.51
550 568 0.828022 AGGCATGCATGATTTGGGTG 59.172 50.000 30.64 1.88 0.00 4.61
551 569 0.812412 GGCATGCATGATTTGGGTGC 60.812 55.000 30.64 12.75 39.26 5.01
552 570 0.177141 GCATGCATGATTTGGGTGCT 59.823 50.000 30.64 0.00 39.52 4.40
553 571 1.409790 GCATGCATGATTTGGGTGCTA 59.590 47.619 30.64 0.00 39.52 3.49
554 572 2.159071 GCATGCATGATTTGGGTGCTAA 60.159 45.455 30.64 0.00 39.52 3.09
555 573 3.450578 CATGCATGATTTGGGTGCTAAC 58.549 45.455 22.59 0.00 39.52 2.34
556 574 1.824230 TGCATGATTTGGGTGCTAACC 59.176 47.619 0.00 0.00 46.81 2.85
565 583 3.249687 GGTGCTAACCCCACAAGAG 57.750 57.895 0.00 0.00 41.04 2.85
566 584 0.322546 GGTGCTAACCCCACAAGAGG 60.323 60.000 0.00 0.00 41.04 3.69
567 585 0.690762 GTGCTAACCCCACAAGAGGA 59.309 55.000 0.00 0.00 33.50 3.71
568 586 1.282157 GTGCTAACCCCACAAGAGGAT 59.718 52.381 0.00 0.00 33.50 3.24
569 587 1.992557 TGCTAACCCCACAAGAGGATT 59.007 47.619 0.00 0.00 0.00 3.01
570 588 2.290896 TGCTAACCCCACAAGAGGATTG 60.291 50.000 0.00 0.00 0.00 2.67
571 589 2.945890 GCTAACCCCACAAGAGGATTGG 60.946 54.545 0.00 0.00 0.00 3.16
572 590 0.251787 AACCCCACAAGAGGATTGGC 60.252 55.000 0.00 0.00 0.00 4.52
573 591 1.380380 CCCCACAAGAGGATTGGCC 60.380 63.158 0.00 0.00 0.00 5.36
574 592 1.750399 CCCACAAGAGGATTGGCCG 60.750 63.158 0.00 0.00 43.43 6.13
575 593 2.409870 CCACAAGAGGATTGGCCGC 61.410 63.158 0.00 0.00 43.43 6.53
576 594 1.675310 CACAAGAGGATTGGCCGCA 60.675 57.895 0.00 0.00 43.43 5.69
577 595 1.033746 CACAAGAGGATTGGCCGCAT 61.034 55.000 0.00 0.00 43.43 4.73
578 596 0.749454 ACAAGAGGATTGGCCGCATC 60.749 55.000 0.00 1.66 43.43 3.91
579 597 0.465097 CAAGAGGATTGGCCGCATCT 60.465 55.000 13.14 7.84 43.43 2.90
580 598 0.257039 AAGAGGATTGGCCGCATCTT 59.743 50.000 12.39 12.39 43.43 2.40
581 599 0.257039 AGAGGATTGGCCGCATCTTT 59.743 50.000 13.14 4.04 43.43 2.52
582 600 1.106285 GAGGATTGGCCGCATCTTTT 58.894 50.000 13.14 1.98 43.43 2.27
583 601 1.478105 GAGGATTGGCCGCATCTTTTT 59.522 47.619 13.14 0.00 43.43 1.94
584 602 2.687935 GAGGATTGGCCGCATCTTTTTA 59.312 45.455 13.14 0.00 43.43 1.52
585 603 3.299503 AGGATTGGCCGCATCTTTTTAT 58.700 40.909 13.14 0.00 43.43 1.40
586 604 3.706086 AGGATTGGCCGCATCTTTTTATT 59.294 39.130 13.14 0.00 43.43 1.40
587 605 4.162131 AGGATTGGCCGCATCTTTTTATTT 59.838 37.500 13.14 0.00 43.43 1.40
588 606 4.507756 GGATTGGCCGCATCTTTTTATTTC 59.492 41.667 13.14 0.00 0.00 2.17
589 607 3.518634 TGGCCGCATCTTTTTATTTCC 57.481 42.857 0.00 0.00 0.00 3.13
590 608 2.828520 TGGCCGCATCTTTTTATTTCCA 59.171 40.909 0.00 0.00 0.00 3.53
591 609 3.259374 TGGCCGCATCTTTTTATTTCCAA 59.741 39.130 0.00 0.00 0.00 3.53
592 610 4.249661 GGCCGCATCTTTTTATTTCCAAA 58.750 39.130 0.00 0.00 0.00 3.28
593 611 4.693095 GGCCGCATCTTTTTATTTCCAAAA 59.307 37.500 0.00 0.00 0.00 2.44
594 612 5.180304 GGCCGCATCTTTTTATTTCCAAAAA 59.820 36.000 0.00 0.00 36.31 1.94
614 632 3.821421 AAGTAACGATCCTTGGCTAGG 57.179 47.619 8.84 8.84 46.27 3.02
615 633 1.413077 AGTAACGATCCTTGGCTAGGC 59.587 52.381 9.85 9.85 44.37 3.93
616 634 1.413077 GTAACGATCCTTGGCTAGGCT 59.587 52.381 18.18 0.00 44.37 4.58
617 635 0.912486 AACGATCCTTGGCTAGGCTT 59.088 50.000 18.18 0.01 44.37 4.35
618 636 0.912486 ACGATCCTTGGCTAGGCTTT 59.088 50.000 18.18 0.00 44.37 3.51
619 637 2.116238 ACGATCCTTGGCTAGGCTTTA 58.884 47.619 18.18 2.21 44.37 1.85
620 638 2.504175 ACGATCCTTGGCTAGGCTTTAA 59.496 45.455 18.18 2.57 44.37 1.52
621 639 2.872858 CGATCCTTGGCTAGGCTTTAAC 59.127 50.000 18.18 4.21 44.37 2.01
622 640 3.432326 CGATCCTTGGCTAGGCTTTAACT 60.432 47.826 18.18 0.00 44.37 2.24
623 641 3.350219 TCCTTGGCTAGGCTTTAACTG 57.650 47.619 18.18 0.00 44.37 3.16
624 642 2.642807 TCCTTGGCTAGGCTTTAACTGT 59.357 45.455 18.18 0.00 44.37 3.55
625 643 2.749621 CCTTGGCTAGGCTTTAACTGTG 59.250 50.000 18.18 0.00 37.17 3.66
626 644 1.821216 TGGCTAGGCTTTAACTGTGC 58.179 50.000 18.18 0.00 0.00 4.57
627 645 0.727398 GGCTAGGCTTTAACTGTGCG 59.273 55.000 9.46 0.00 0.00 5.34
628 646 1.439679 GCTAGGCTTTAACTGTGCGT 58.560 50.000 0.00 0.00 0.00 5.24
629 647 1.393883 GCTAGGCTTTAACTGTGCGTC 59.606 52.381 0.00 0.00 0.00 5.19
630 648 2.000447 CTAGGCTTTAACTGTGCGTCC 59.000 52.381 0.00 0.00 0.00 4.79
631 649 0.396811 AGGCTTTAACTGTGCGTCCT 59.603 50.000 0.00 0.00 0.00 3.85
632 650 1.621814 AGGCTTTAACTGTGCGTCCTA 59.378 47.619 0.00 0.00 0.00 2.94
633 651 1.730612 GGCTTTAACTGTGCGTCCTAC 59.269 52.381 0.00 0.00 0.00 3.18
634 652 2.409975 GCTTTAACTGTGCGTCCTACA 58.590 47.619 0.00 0.00 0.00 2.74
635 653 3.000727 GCTTTAACTGTGCGTCCTACAT 58.999 45.455 0.00 0.00 0.00 2.29
636 654 3.435671 GCTTTAACTGTGCGTCCTACATT 59.564 43.478 0.00 0.00 0.00 2.71
637 655 4.628333 GCTTTAACTGTGCGTCCTACATTA 59.372 41.667 0.00 0.00 0.00 1.90
638 656 5.293569 GCTTTAACTGTGCGTCCTACATTAT 59.706 40.000 0.00 0.00 0.00 1.28
639 657 6.656314 TTTAACTGTGCGTCCTACATTATG 57.344 37.500 0.00 0.00 0.00 1.90
640 658 3.179443 ACTGTGCGTCCTACATTATGG 57.821 47.619 0.00 0.00 0.00 2.74
641 659 2.158957 ACTGTGCGTCCTACATTATGGG 60.159 50.000 0.00 0.00 0.00 4.00
642 660 2.102420 CTGTGCGTCCTACATTATGGGA 59.898 50.000 0.00 0.00 35.07 4.37
643 661 2.703536 TGTGCGTCCTACATTATGGGAT 59.296 45.455 0.00 0.00 40.69 3.85
644 662 3.135712 TGTGCGTCCTACATTATGGGATT 59.864 43.478 0.00 0.00 40.69 3.01
645 663 3.498397 GTGCGTCCTACATTATGGGATTG 59.502 47.826 0.00 0.00 40.69 2.67
646 664 2.484264 GCGTCCTACATTATGGGATTGC 59.516 50.000 0.00 0.47 40.69 3.56
647 665 3.738982 CGTCCTACATTATGGGATTGCA 58.261 45.455 0.00 0.00 40.69 4.08
648 666 4.326826 CGTCCTACATTATGGGATTGCAT 58.673 43.478 0.00 0.00 40.69 3.96
649 667 4.154737 CGTCCTACATTATGGGATTGCATG 59.845 45.833 0.00 0.00 40.69 4.06
650 668 5.072741 GTCCTACATTATGGGATTGCATGT 58.927 41.667 0.00 0.00 40.69 3.21
651 669 6.237901 GTCCTACATTATGGGATTGCATGTA 58.762 40.000 0.00 0.00 40.69 2.29
652 670 6.714810 GTCCTACATTATGGGATTGCATGTAA 59.285 38.462 0.00 0.00 40.69 2.41
653 671 7.230510 GTCCTACATTATGGGATTGCATGTAAA 59.769 37.037 0.00 0.00 40.69 2.01
654 672 7.949565 TCCTACATTATGGGATTGCATGTAAAT 59.050 33.333 0.00 0.00 31.72 1.40
655 673 8.246180 CCTACATTATGGGATTGCATGTAAATC 58.754 37.037 0.00 7.43 31.55 2.17
664 682 6.314784 GGATTGCATGTAAATCCTAATACGC 58.685 40.000 24.18 5.94 46.48 4.42
665 683 5.682943 TTGCATGTAAATCCTAATACGCC 57.317 39.130 0.00 0.00 0.00 5.68
666 684 4.968259 TGCATGTAAATCCTAATACGCCT 58.032 39.130 0.00 0.00 0.00 5.52
667 685 6.104146 TGCATGTAAATCCTAATACGCCTA 57.896 37.500 0.00 0.00 0.00 3.93
668 686 6.526526 TGCATGTAAATCCTAATACGCCTAA 58.473 36.000 0.00 0.00 0.00 2.69
669 687 6.649141 TGCATGTAAATCCTAATACGCCTAAG 59.351 38.462 0.00 0.00 0.00 2.18
670 688 6.872020 GCATGTAAATCCTAATACGCCTAAGA 59.128 38.462 0.00 0.00 0.00 2.10
671 689 7.549488 GCATGTAAATCCTAATACGCCTAAGAT 59.451 37.037 0.00 0.00 0.00 2.40
672 690 9.436957 CATGTAAATCCTAATACGCCTAAGATT 57.563 33.333 0.00 0.00 0.00 2.40
674 692 9.841295 TGTAAATCCTAATACGCCTAAGATTTT 57.159 29.630 0.00 0.00 35.00 1.82
676 694 7.745620 AATCCTAATACGCCTAAGATTTTGG 57.254 36.000 0.00 0.00 0.00 3.28
677 695 5.617252 TCCTAATACGCCTAAGATTTTGGG 58.383 41.667 0.00 0.00 37.95 4.12
678 696 5.367352 TCCTAATACGCCTAAGATTTTGGGA 59.633 40.000 2.20 0.00 37.11 4.37
679 697 6.059484 CCTAATACGCCTAAGATTTTGGGAA 58.941 40.000 2.20 0.00 37.11 3.97
680 698 6.204882 CCTAATACGCCTAAGATTTTGGGAAG 59.795 42.308 2.20 0.00 37.11 3.46
681 699 2.723273 ACGCCTAAGATTTTGGGAAGG 58.277 47.619 2.20 0.00 37.11 3.46
682 700 2.307686 ACGCCTAAGATTTTGGGAAGGA 59.692 45.455 2.20 0.00 37.11 3.36
683 701 2.945668 CGCCTAAGATTTTGGGAAGGAG 59.054 50.000 2.20 0.00 37.11 3.69
684 702 3.291584 GCCTAAGATTTTGGGAAGGAGG 58.708 50.000 2.20 0.00 37.11 4.30
685 703 3.903467 CCTAAGATTTTGGGAAGGAGGG 58.097 50.000 0.00 0.00 37.11 4.30
686 704 3.527665 CCTAAGATTTTGGGAAGGAGGGA 59.472 47.826 0.00 0.00 37.11 4.20
687 705 3.746792 AAGATTTTGGGAAGGAGGGAG 57.253 47.619 0.00 0.00 0.00 4.30
688 706 2.648838 AGATTTTGGGAAGGAGGGAGT 58.351 47.619 0.00 0.00 0.00 3.85
689 707 3.815507 AGATTTTGGGAAGGAGGGAGTA 58.184 45.455 0.00 0.00 0.00 2.59
690 708 3.783082 AGATTTTGGGAAGGAGGGAGTAG 59.217 47.826 0.00 0.00 0.00 2.57
691 709 1.286248 TTTGGGAAGGAGGGAGTAGC 58.714 55.000 0.00 0.00 0.00 3.58
692 710 0.417841 TTGGGAAGGAGGGAGTAGCT 59.582 55.000 0.00 0.00 0.00 3.32
773 805 9.955208 ATCAGTTTGTATATTTGCATACACATG 57.045 29.630 0.00 0.00 40.28 3.21
823 872 2.746269 GTATAAGCGGCGTCAACCATA 58.254 47.619 9.37 0.00 0.00 2.74
885 939 0.108377 ATGTAGTTGTGCGCGGATCA 60.108 50.000 8.83 3.19 0.00 2.92
887 941 0.370273 GTAGTTGTGCGCGGATCAAG 59.630 55.000 8.83 0.00 0.00 3.02
888 942 0.245266 TAGTTGTGCGCGGATCAAGA 59.755 50.000 8.83 1.23 0.00 3.02
889 943 0.602638 AGTTGTGCGCGGATCAAGAA 60.603 50.000 8.83 0.00 0.00 2.52
890 944 0.452784 GTTGTGCGCGGATCAAGAAC 60.453 55.000 8.83 0.99 0.00 3.01
891 945 0.882484 TTGTGCGCGGATCAAGAACA 60.882 50.000 8.83 0.00 0.00 3.18
895 949 0.924090 GCGCGGATCAAGAACAGTAG 59.076 55.000 8.83 0.00 0.00 2.57
931 1150 3.743911 CGGTATACACACACACACACAAT 59.256 43.478 5.01 0.00 0.00 2.71
932 1151 4.924462 CGGTATACACACACACACACAATA 59.076 41.667 5.01 0.00 0.00 1.90
933 1152 5.579119 CGGTATACACACACACACACAATAT 59.421 40.000 5.01 0.00 0.00 1.28
934 1153 6.752815 CGGTATACACACACACACACAATATA 59.247 38.462 5.01 0.00 0.00 0.86
936 1155 9.104965 GGTATACACACACACACACAATATAAT 57.895 33.333 5.01 0.00 0.00 1.28
1003 1257 0.178767 TTGGCCACAGATCGAGATGG 59.821 55.000 3.88 4.06 35.17 3.51
1012 1266 0.879400 GATCGAGATGGTGCCTGCAG 60.879 60.000 6.78 6.78 0.00 4.41
1037 1330 2.395360 GCGCTGGTGGCACGAATAA 61.395 57.895 12.17 0.00 41.91 1.40
1040 1333 1.094785 GCTGGTGGCACGAATAATGT 58.905 50.000 12.17 0.00 41.35 2.71
1049 1342 4.041723 GGCACGAATAATGTTAATGGTGC 58.958 43.478 15.33 15.33 46.34 5.01
1061 1354 1.666209 AATGGTGCTAATGGTGGCGC 61.666 55.000 0.00 0.00 40.76 6.53
1063 1356 2.764314 GGTGCTAATGGTGGCGCTG 61.764 63.158 7.64 0.00 41.21 5.18
1064 1357 2.438254 TGCTAATGGTGGCGCTGG 60.438 61.111 7.64 0.00 32.95 4.85
1066 1359 2.764314 GCTAATGGTGGCGCTGGTG 61.764 63.158 7.64 0.00 0.00 4.17
1067 1360 2.045438 TAATGGTGGCGCTGGTGG 60.045 61.111 7.64 0.00 0.00 4.61
1076 1369 3.276091 CGCTGGTGGCACGAACAA 61.276 61.111 12.17 0.00 41.91 2.83
1077 1370 2.616330 CGCTGGTGGCACGAACAAT 61.616 57.895 12.17 0.00 41.91 2.71
1078 1371 1.081242 GCTGGTGGCACGAACAATG 60.081 57.895 12.17 0.00 41.35 2.82
1079 1372 1.795170 GCTGGTGGCACGAACAATGT 61.795 55.000 12.17 0.00 41.35 2.71
1080 1373 0.667993 CTGGTGGCACGAACAATGTT 59.332 50.000 12.17 0.00 0.00 2.71
1081 1374 1.066908 CTGGTGGCACGAACAATGTTT 59.933 47.619 12.17 0.00 0.00 2.83
1082 1375 1.066303 TGGTGGCACGAACAATGTTTC 59.934 47.619 12.17 0.00 0.00 2.78
1083 1376 1.601914 GGTGGCACGAACAATGTTTCC 60.602 52.381 12.17 0.85 0.00 3.13
1090 1383 1.662876 CGAACAATGTTTCCGGTGCTG 60.663 52.381 0.00 0.00 0.00 4.41
1145 1438 3.286751 GCAGCTGCCAACGGTGAA 61.287 61.111 28.76 0.00 34.31 3.18
1169 1462 3.786516 TCAGTATGCGGAACAATACGA 57.213 42.857 0.00 0.00 34.76 3.43
1192 1485 3.204827 CATACCCAGCAGCACCGC 61.205 66.667 0.00 0.00 0.00 5.68
1198 1491 2.436469 CAGCAGCACCGCCATACA 60.436 61.111 0.00 0.00 0.00 2.29
1252 1545 3.508845 ATTGCTATGGGTATGGTGGAC 57.491 47.619 0.00 0.00 0.00 4.02
1276 1581 0.542467 TTCTGGTGGGTACGGCTACA 60.542 55.000 0.00 0.00 0.00 2.74
1282 1587 1.358046 GGGTACGGCTACAGCTACG 59.642 63.158 0.54 0.00 41.70 3.51
1283 1588 1.097547 GGGTACGGCTACAGCTACGA 61.098 60.000 6.84 0.00 41.70 3.43
1286 1591 2.205074 GTACGGCTACAGCTACGACTA 58.795 52.381 6.84 0.00 41.70 2.59
1319 1631 4.685848 CGATGGTATTTGGGATGAACCTGA 60.686 45.833 0.00 0.00 38.98 3.86
1418 1730 1.481056 CCTCAGTTTGGTCGGGGAGT 61.481 60.000 0.00 0.00 0.00 3.85
1434 1746 0.035056 GAGTTGGTGCTGGTGGCTAT 60.035 55.000 0.00 0.00 42.39 2.97
1435 1747 1.209504 GAGTTGGTGCTGGTGGCTATA 59.790 52.381 0.00 0.00 42.39 1.31
1436 1748 1.210478 AGTTGGTGCTGGTGGCTATAG 59.790 52.381 0.00 0.00 42.39 1.31
1437 1749 0.107214 TTGGTGCTGGTGGCTATAGC 60.107 55.000 16.78 16.78 42.39 2.97
1438 1750 0.982852 TGGTGCTGGTGGCTATAGCT 60.983 55.000 23.53 0.00 42.39 3.32
1439 1751 0.533755 GGTGCTGGTGGCTATAGCTG 60.534 60.000 23.53 10.35 42.39 4.24
1440 1752 1.146930 TGCTGGTGGCTATAGCTGC 59.853 57.895 23.53 18.33 42.39 5.25
1441 1753 1.340399 TGCTGGTGGCTATAGCTGCT 61.340 55.000 23.53 7.57 41.61 4.24
1442 1754 0.681733 GCTGGTGGCTATAGCTGCTA 59.318 55.000 23.53 12.40 41.70 3.49
1443 1755 1.606737 GCTGGTGGCTATAGCTGCTAC 60.607 57.143 23.53 16.21 40.45 3.58
1444 1756 0.673985 TGGTGGCTATAGCTGCTACG 59.326 55.000 23.53 7.44 41.77 3.51
1445 1757 0.038159 GGTGGCTATAGCTGCTACGG 60.038 60.000 23.53 8.75 41.77 4.02
1446 1758 0.667792 GTGGCTATAGCTGCTACGGC 60.668 60.000 23.53 20.35 41.70 5.68
1447 1759 1.444553 GGCTATAGCTGCTACGGCG 60.445 63.158 23.53 4.80 41.21 6.46
1448 1760 1.444553 GCTATAGCTGCTACGGCGG 60.445 63.158 17.75 0.00 46.87 6.13
1449 1761 1.957562 CTATAGCTGCTACGGCGGT 59.042 57.895 12.26 1.39 45.94 5.68
1450 1762 0.387367 CTATAGCTGCTACGGCGGTG 60.387 60.000 12.26 4.20 45.94 4.94
1451 1763 1.802337 TATAGCTGCTACGGCGGTGG 61.802 60.000 12.26 5.17 45.94 4.61
1468 1780 4.971125 GCGGTGGCGGCTATCCTC 62.971 72.222 11.43 1.62 0.00 3.71
1469 1781 4.301027 CGGTGGCGGCTATCCTCC 62.301 72.222 11.43 0.00 37.75 4.30
1470 1782 3.942439 GGTGGCGGCTATCCTCCC 61.942 72.222 11.43 0.00 36.37 4.30
1471 1783 3.161450 GTGGCGGCTATCCTCCCA 61.161 66.667 11.43 0.00 36.37 4.37
1472 1784 2.844362 TGGCGGCTATCCTCCCAG 60.844 66.667 11.43 0.00 36.37 4.45
1473 1785 2.844839 GGCGGCTATCCTCCCAGT 60.845 66.667 0.00 0.00 30.83 4.00
1474 1786 2.444256 GGCGGCTATCCTCCCAGTT 61.444 63.158 0.00 0.00 30.83 3.16
1475 1787 1.069935 GCGGCTATCCTCCCAGTTC 59.930 63.158 0.00 0.00 0.00 3.01
1476 1788 1.686325 GCGGCTATCCTCCCAGTTCA 61.686 60.000 0.00 0.00 0.00 3.18
1477 1789 1.051812 CGGCTATCCTCCCAGTTCAT 58.948 55.000 0.00 0.00 0.00 2.57
1478 1790 1.417890 CGGCTATCCTCCCAGTTCATT 59.582 52.381 0.00 0.00 0.00 2.57
1479 1791 2.158755 CGGCTATCCTCCCAGTTCATTT 60.159 50.000 0.00 0.00 0.00 2.32
1480 1792 3.481453 GGCTATCCTCCCAGTTCATTTC 58.519 50.000 0.00 0.00 0.00 2.17
1481 1793 3.481453 GCTATCCTCCCAGTTCATTTCC 58.519 50.000 0.00 0.00 0.00 3.13
1482 1794 2.717639 ATCCTCCCAGTTCATTTCCG 57.282 50.000 0.00 0.00 0.00 4.30
1483 1795 1.358152 TCCTCCCAGTTCATTTCCGT 58.642 50.000 0.00 0.00 0.00 4.69
1484 1796 1.278127 TCCTCCCAGTTCATTTCCGTC 59.722 52.381 0.00 0.00 0.00 4.79
1485 1797 1.279271 CCTCCCAGTTCATTTCCGTCT 59.721 52.381 0.00 0.00 0.00 4.18
1486 1798 2.350522 CTCCCAGTTCATTTCCGTCTG 58.649 52.381 0.00 0.00 0.00 3.51
1487 1799 1.697432 TCCCAGTTCATTTCCGTCTGT 59.303 47.619 0.00 0.00 0.00 3.41
1488 1800 2.901192 TCCCAGTTCATTTCCGTCTGTA 59.099 45.455 0.00 0.00 0.00 2.74
1489 1801 3.056107 TCCCAGTTCATTTCCGTCTGTAG 60.056 47.826 0.00 0.00 0.00 2.74
1490 1802 3.262420 CCAGTTCATTTCCGTCTGTAGG 58.738 50.000 0.00 0.00 0.00 3.18
1491 1803 3.306780 CCAGTTCATTTCCGTCTGTAGGT 60.307 47.826 0.00 0.00 0.00 3.08
1492 1804 4.081862 CCAGTTCATTTCCGTCTGTAGGTA 60.082 45.833 0.00 0.00 0.00 3.08
1493 1805 4.863131 CAGTTCATTTCCGTCTGTAGGTAC 59.137 45.833 0.00 0.00 0.00 3.34
1494 1806 4.081807 AGTTCATTTCCGTCTGTAGGTACC 60.082 45.833 2.73 2.73 0.00 3.34
1495 1807 3.433343 TCATTTCCGTCTGTAGGTACCA 58.567 45.455 15.94 0.00 0.00 3.25
1496 1808 4.028131 TCATTTCCGTCTGTAGGTACCAT 58.972 43.478 15.94 1.66 0.00 3.55
1497 1809 4.098960 TCATTTCCGTCTGTAGGTACCATC 59.901 45.833 15.94 7.04 0.00 3.51
1498 1810 1.671979 TCCGTCTGTAGGTACCATCG 58.328 55.000 15.94 8.74 0.00 3.84
1499 1811 1.210234 TCCGTCTGTAGGTACCATCGA 59.790 52.381 15.94 1.79 0.00 3.59
1500 1812 2.158711 TCCGTCTGTAGGTACCATCGAT 60.159 50.000 15.94 0.00 0.00 3.59
1501 1813 3.071457 TCCGTCTGTAGGTACCATCGATA 59.929 47.826 15.94 0.00 0.00 2.92
1502 1814 3.188048 CCGTCTGTAGGTACCATCGATAC 59.812 52.174 15.94 7.96 0.00 2.24
1503 1815 4.063689 CGTCTGTAGGTACCATCGATACT 58.936 47.826 15.94 0.00 0.00 2.12
1504 1816 5.233225 CGTCTGTAGGTACCATCGATACTA 58.767 45.833 15.94 0.00 0.00 1.82
1505 1817 5.873712 CGTCTGTAGGTACCATCGATACTAT 59.126 44.000 15.94 0.00 0.00 2.12
1506 1818 6.183360 CGTCTGTAGGTACCATCGATACTATG 60.183 46.154 15.94 2.63 0.00 2.23
1507 1819 6.877855 GTCTGTAGGTACCATCGATACTATGA 59.122 42.308 15.94 5.21 0.00 2.15
1508 1820 7.553402 GTCTGTAGGTACCATCGATACTATGAT 59.447 40.741 15.94 0.00 0.00 2.45
1509 1821 7.553044 TCTGTAGGTACCATCGATACTATGATG 59.447 40.741 15.94 0.00 41.27 3.07
1510 1822 5.584253 AGGTACCATCGATACTATGATGC 57.416 43.478 15.94 0.00 40.48 3.91
1511 1823 5.016831 AGGTACCATCGATACTATGATGCA 58.983 41.667 15.94 0.00 40.48 3.96
1512 1824 5.658634 AGGTACCATCGATACTATGATGCAT 59.341 40.000 15.94 0.00 40.48 3.96
1513 1825 5.750547 GGTACCATCGATACTATGATGCATG 59.249 44.000 2.46 0.00 40.48 4.06
1514 1826 5.411831 ACCATCGATACTATGATGCATGT 57.588 39.130 2.46 0.00 40.48 3.21
1515 1827 6.530019 ACCATCGATACTATGATGCATGTA 57.470 37.500 2.46 0.00 40.48 2.29
1516 1828 6.567959 ACCATCGATACTATGATGCATGTAG 58.432 40.000 2.46 9.02 40.48 2.74
1517 1829 5.461407 CCATCGATACTATGATGCATGTAGC 59.539 44.000 2.46 1.66 40.48 3.58
1527 1839 3.984292 GCATGTAGCAGCTCAACAC 57.016 52.632 0.00 0.00 44.79 3.32
1528 1840 1.159285 GCATGTAGCAGCTCAACACA 58.841 50.000 0.00 0.00 44.79 3.72
1529 1841 1.135859 GCATGTAGCAGCTCAACACAC 60.136 52.381 0.00 0.00 44.79 3.82
1530 1842 2.145536 CATGTAGCAGCTCAACACACA 58.854 47.619 0.00 0.00 0.00 3.72
1531 1843 1.581934 TGTAGCAGCTCAACACACAC 58.418 50.000 0.00 0.00 0.00 3.82
1532 1844 1.138859 TGTAGCAGCTCAACACACACT 59.861 47.619 0.00 0.00 0.00 3.55
1533 1845 2.364002 TGTAGCAGCTCAACACACACTA 59.636 45.455 0.00 0.00 0.00 2.74
1534 1846 1.871080 AGCAGCTCAACACACACTAC 58.129 50.000 0.00 0.00 0.00 2.73
1535 1847 1.414181 AGCAGCTCAACACACACTACT 59.586 47.619 0.00 0.00 0.00 2.57
1536 1848 1.795286 GCAGCTCAACACACACTACTC 59.205 52.381 0.00 0.00 0.00 2.59
1537 1849 2.803133 GCAGCTCAACACACACTACTCA 60.803 50.000 0.00 0.00 0.00 3.41
1538 1850 3.657634 CAGCTCAACACACACTACTCAT 58.342 45.455 0.00 0.00 0.00 2.90
1539 1851 4.809673 CAGCTCAACACACACTACTCATA 58.190 43.478 0.00 0.00 0.00 2.15
1540 1852 5.414360 CAGCTCAACACACACTACTCATAT 58.586 41.667 0.00 0.00 0.00 1.78
1541 1853 5.518128 CAGCTCAACACACACTACTCATATC 59.482 44.000 0.00 0.00 0.00 1.63
1542 1854 5.185828 AGCTCAACACACACTACTCATATCA 59.814 40.000 0.00 0.00 0.00 2.15
1543 1855 5.289675 GCTCAACACACACTACTCATATCAC 59.710 44.000 0.00 0.00 0.00 3.06
1544 1856 6.590234 TCAACACACACTACTCATATCACT 57.410 37.500 0.00 0.00 0.00 3.41
1545 1857 6.621613 TCAACACACACTACTCATATCACTC 58.378 40.000 0.00 0.00 0.00 3.51
1546 1858 6.208599 TCAACACACACTACTCATATCACTCA 59.791 38.462 0.00 0.00 0.00 3.41
1547 1859 6.201226 ACACACACTACTCATATCACTCAG 57.799 41.667 0.00 0.00 0.00 3.35
1548 1860 5.712446 ACACACACTACTCATATCACTCAGT 59.288 40.000 0.00 0.00 0.00 3.41
1549 1861 6.209589 ACACACACTACTCATATCACTCAGTT 59.790 38.462 0.00 0.00 0.00 3.16
1550 1862 7.393515 ACACACACTACTCATATCACTCAGTTA 59.606 37.037 0.00 0.00 0.00 2.24
1551 1863 7.912773 CACACACTACTCATATCACTCAGTTAG 59.087 40.741 0.00 0.00 0.00 2.34
1552 1864 7.612244 ACACACTACTCATATCACTCAGTTAGT 59.388 37.037 0.00 0.00 39.81 2.24
1553 1865 8.462811 CACACTACTCATATCACTCAGTTAGTT 58.537 37.037 0.00 0.00 35.76 2.24
1554 1866 8.462811 ACACTACTCATATCACTCAGTTAGTTG 58.537 37.037 0.00 0.00 35.76 3.16
1555 1867 8.462811 CACTACTCATATCACTCAGTTAGTTGT 58.537 37.037 0.00 0.00 35.76 3.32
1556 1868 9.026121 ACTACTCATATCACTCAGTTAGTTGTT 57.974 33.333 0.00 0.00 35.76 2.83
1557 1869 9.295214 CTACTCATATCACTCAGTTAGTTGTTG 57.705 37.037 0.00 0.00 35.76 3.33
1558 1870 7.671302 ACTCATATCACTCAGTTAGTTGTTGT 58.329 34.615 0.00 0.00 35.76 3.32
1559 1871 7.600375 ACTCATATCACTCAGTTAGTTGTTGTG 59.400 37.037 0.00 0.00 35.76 3.33
1560 1872 6.368791 TCATATCACTCAGTTAGTTGTTGTGC 59.631 38.462 0.00 0.00 35.76 4.57
1561 1873 4.137116 TCACTCAGTTAGTTGTTGTGCT 57.863 40.909 0.00 0.00 35.76 4.40
1562 1874 3.871006 TCACTCAGTTAGTTGTTGTGCTG 59.129 43.478 0.00 0.00 35.76 4.41
1563 1875 3.871006 CACTCAGTTAGTTGTTGTGCTGA 59.129 43.478 0.00 0.00 35.76 4.26
1564 1876 4.512944 CACTCAGTTAGTTGTTGTGCTGAT 59.487 41.667 0.00 0.00 35.76 2.90
1565 1877 5.008019 CACTCAGTTAGTTGTTGTGCTGATT 59.992 40.000 0.00 0.00 35.76 2.57
1566 1878 5.008019 ACTCAGTTAGTTGTTGTGCTGATTG 59.992 40.000 0.00 0.00 33.35 2.67
1567 1879 5.122519 TCAGTTAGTTGTTGTGCTGATTGA 58.877 37.500 0.00 0.00 0.00 2.57
1568 1880 5.764686 TCAGTTAGTTGTTGTGCTGATTGAT 59.235 36.000 0.00 0.00 0.00 2.57
1569 1881 5.854866 CAGTTAGTTGTTGTGCTGATTGATG 59.145 40.000 0.00 0.00 0.00 3.07
1570 1882 3.928727 AGTTGTTGTGCTGATTGATGG 57.071 42.857 0.00 0.00 0.00 3.51
1571 1883 2.029649 AGTTGTTGTGCTGATTGATGGC 60.030 45.455 0.00 0.00 0.00 4.40
1572 1884 1.913778 TGTTGTGCTGATTGATGGCT 58.086 45.000 0.00 0.00 0.00 4.75
1573 1885 1.814394 TGTTGTGCTGATTGATGGCTC 59.186 47.619 0.00 0.00 0.00 4.70
1574 1886 1.089112 TTGTGCTGATTGATGGCTCG 58.911 50.000 0.00 0.00 0.00 5.03
1575 1887 0.249955 TGTGCTGATTGATGGCTCGA 59.750 50.000 0.00 0.00 0.00 4.04
1576 1888 1.134310 TGTGCTGATTGATGGCTCGAT 60.134 47.619 0.00 0.00 0.00 3.59
1577 1889 1.945394 GTGCTGATTGATGGCTCGATT 59.055 47.619 0.00 0.00 0.00 3.34
1578 1890 2.032204 GTGCTGATTGATGGCTCGATTC 60.032 50.000 0.00 0.00 0.00 2.52
1579 1891 2.216046 GCTGATTGATGGCTCGATTCA 58.784 47.619 0.00 0.00 0.00 2.57
1580 1892 2.223611 GCTGATTGATGGCTCGATTCAG 59.776 50.000 0.00 0.00 0.00 3.02
1581 1893 2.806818 CTGATTGATGGCTCGATTCAGG 59.193 50.000 0.00 0.00 0.00 3.86
1582 1894 2.435437 TGATTGATGGCTCGATTCAGGA 59.565 45.455 0.00 0.00 0.00 3.86
1583 1895 2.609427 TTGATGGCTCGATTCAGGAG 57.391 50.000 0.00 0.00 34.62 3.69
1584 1896 0.755079 TGATGGCTCGATTCAGGAGG 59.245 55.000 0.00 0.00 32.10 4.30
1585 1897 1.043816 GATGGCTCGATTCAGGAGGA 58.956 55.000 0.00 0.00 32.10 3.71
1586 1898 1.000731 GATGGCTCGATTCAGGAGGAG 59.999 57.143 0.00 0.00 32.10 3.69
1587 1899 1.045350 TGGCTCGATTCAGGAGGAGG 61.045 60.000 0.00 0.00 32.10 4.30
1588 1900 0.757188 GGCTCGATTCAGGAGGAGGA 60.757 60.000 0.00 0.00 32.10 3.71
1589 1901 0.673437 GCTCGATTCAGGAGGAGGAG 59.327 60.000 0.00 0.00 32.10 3.69
1590 1902 1.327303 CTCGATTCAGGAGGAGGAGG 58.673 60.000 0.00 0.00 0.00 4.30
1591 1903 0.757188 TCGATTCAGGAGGAGGAGGC 60.757 60.000 0.00 0.00 0.00 4.70
1592 1904 1.745264 GATTCAGGAGGAGGAGGCG 59.255 63.158 0.00 0.00 0.00 5.52
1593 1905 1.753368 GATTCAGGAGGAGGAGGCGG 61.753 65.000 0.00 0.00 0.00 6.13
1611 1923 4.033776 CGGCTGTGATGGTGGGGT 62.034 66.667 0.00 0.00 0.00 4.95
1612 1924 2.044946 GGCTGTGATGGTGGGGTC 60.045 66.667 0.00 0.00 0.00 4.46
1613 1925 2.756400 GCTGTGATGGTGGGGTCA 59.244 61.111 0.00 0.00 0.00 4.02
1614 1926 1.377725 GCTGTGATGGTGGGGTCAG 60.378 63.158 0.00 0.00 0.00 3.51
1615 1927 1.377725 CTGTGATGGTGGGGTCAGC 60.378 63.158 0.00 0.00 41.42 4.26
1620 1932 4.947147 TGGTGGGGTCAGCAACGC 62.947 66.667 0.00 0.00 46.80 4.84
1621 1933 4.643387 GGTGGGGTCAGCAACGCT 62.643 66.667 6.33 0.00 40.79 5.07
1622 1934 2.594592 GTGGGGTCAGCAACGCTT 60.595 61.111 6.33 0.00 36.40 4.68
1623 1935 1.302192 GTGGGGTCAGCAACGCTTA 60.302 57.895 6.33 0.00 36.40 3.09
1624 1936 1.302192 TGGGGTCAGCAACGCTTAC 60.302 57.895 6.33 0.00 36.40 2.34
1626 1938 2.388232 GGGTCAGCAACGCTTACGG 61.388 63.158 0.00 0.00 46.04 4.02
1627 1939 1.373748 GGTCAGCAACGCTTACGGA 60.374 57.895 0.00 0.00 46.04 4.69
1628 1940 1.352156 GGTCAGCAACGCTTACGGAG 61.352 60.000 0.00 0.00 46.04 4.63
1629 1941 1.080093 TCAGCAACGCTTACGGAGG 60.080 57.895 0.00 0.00 46.04 4.30
1630 1942 2.100631 CAGCAACGCTTACGGAGGG 61.101 63.158 4.03 4.03 46.04 4.30
1631 1943 3.497031 GCAACGCTTACGGAGGGC 61.497 66.667 5.27 0.00 46.04 5.19
1632 1944 2.818274 CAACGCTTACGGAGGGCC 60.818 66.667 0.00 0.00 46.04 5.80
1653 1965 4.537433 GCAGGAGAAGCCGCGGAT 62.537 66.667 33.48 23.90 43.43 4.18
1654 1966 2.587194 CAGGAGAAGCCGCGGATG 60.587 66.667 33.48 5.30 43.43 3.51
1655 1967 2.759973 AGGAGAAGCCGCGGATGA 60.760 61.111 33.48 0.00 43.43 2.92
1656 1968 2.279784 GGAGAAGCCGCGGATGAG 60.280 66.667 33.48 0.95 0.00 2.90
1657 1969 2.964389 GAGAAGCCGCGGATGAGC 60.964 66.667 33.48 16.59 0.00 4.26
1666 1978 4.873129 CGGATGAGCGTCGGGTGG 62.873 72.222 0.00 0.00 0.00 4.61
1667 1979 4.530857 GGATGAGCGTCGGGTGGG 62.531 72.222 0.00 0.00 0.00 4.61
1668 1980 3.771160 GATGAGCGTCGGGTGGGT 61.771 66.667 0.00 0.00 0.00 4.51
1669 1981 2.363276 ATGAGCGTCGGGTGGGTA 60.363 61.111 0.00 0.00 0.00 3.69
1670 1982 2.351336 GATGAGCGTCGGGTGGGTAG 62.351 65.000 0.00 0.00 0.00 3.18
1671 1983 4.509737 GAGCGTCGGGTGGGTAGC 62.510 72.222 0.00 0.00 0.00 3.58
1694 2006 2.426023 GGGGTGCTACCGCCTATG 59.574 66.667 10.10 0.00 44.59 2.23
1695 2007 2.426023 GGGTGCTACCGCCTATGG 59.574 66.667 0.00 0.00 39.83 2.74
1696 2008 2.138179 GGGTGCTACCGCCTATGGA 61.138 63.158 0.00 0.00 39.83 3.41
1697 2009 1.367840 GGTGCTACCGCCTATGGAG 59.632 63.158 0.00 0.00 38.62 3.86
1715 2027 4.319133 GGTACCAGCACCACATGG 57.681 61.111 7.15 0.00 42.60 3.66
1716 2028 1.378514 GGTACCAGCACCACATGGG 60.379 63.158 7.15 0.00 41.13 4.00
1717 2029 2.046285 GTACCAGCACCACATGGGC 61.046 63.158 2.32 3.22 41.13 5.36
1718 2030 3.620419 TACCAGCACCACATGGGCG 62.620 63.158 2.32 0.00 41.13 6.13
1721 2033 4.722700 AGCACCACATGGGCGGTC 62.723 66.667 2.32 0.00 42.05 4.79
1723 2035 4.697756 CACCACATGGGCGGTCGT 62.698 66.667 2.32 0.00 42.05 4.34
1724 2036 4.697756 ACCACATGGGCGGTCGTG 62.698 66.667 2.32 0.00 42.05 4.35
1726 2038 4.697756 CACATGGGCGGTCGTGGT 62.698 66.667 0.00 0.00 0.00 4.16
1727 2039 4.697756 ACATGGGCGGTCGTGGTG 62.698 66.667 0.00 0.00 0.00 4.17
1732 2044 3.777910 GGCGGTCGTGGTGGGTAT 61.778 66.667 0.00 0.00 0.00 2.73
1733 2045 2.510691 GCGGTCGTGGTGGGTATG 60.511 66.667 0.00 0.00 0.00 2.39
1734 2046 2.185867 CGGTCGTGGTGGGTATGG 59.814 66.667 0.00 0.00 0.00 2.74
1735 2047 2.652095 CGGTCGTGGTGGGTATGGT 61.652 63.158 0.00 0.00 0.00 3.55
1736 2048 1.078708 GGTCGTGGTGGGTATGGTG 60.079 63.158 0.00 0.00 0.00 4.17
1737 2049 1.078708 GTCGTGGTGGGTATGGTGG 60.079 63.158 0.00 0.00 0.00 4.61
1738 2050 1.229241 TCGTGGTGGGTATGGTGGA 60.229 57.895 0.00 0.00 0.00 4.02
1739 2051 1.220749 CGTGGTGGGTATGGTGGAG 59.779 63.158 0.00 0.00 0.00 3.86
1740 2052 1.077716 GTGGTGGGTATGGTGGAGC 60.078 63.158 0.00 0.00 0.00 4.70
1741 2053 1.229820 TGGTGGGTATGGTGGAGCT 60.230 57.895 0.00 0.00 0.00 4.09
1742 2054 1.224592 GGTGGGTATGGTGGAGCTG 59.775 63.158 0.00 0.00 0.00 4.24
1743 2055 1.224592 GTGGGTATGGTGGAGCTGG 59.775 63.158 0.00 0.00 0.00 4.85
1744 2056 1.229820 TGGGTATGGTGGAGCTGGT 60.230 57.895 0.00 0.00 0.00 4.00
1745 2057 1.224592 GGGTATGGTGGAGCTGGTG 59.775 63.158 0.00 0.00 0.00 4.17
1746 2058 1.452108 GGTATGGTGGAGCTGGTGC 60.452 63.158 0.00 0.00 40.05 5.01
1812 2136 2.628657 GTTATCCTCCGACTGCAGGTAT 59.371 50.000 19.93 0.00 0.00 2.73
1884 2213 4.151335 CACTCACTCAGTTGTTATGCTGAC 59.849 45.833 0.00 0.00 36.89 3.51
2074 2439 0.662374 CGACGACGGCTGTACTTGTT 60.662 55.000 0.00 0.00 35.72 2.83
2170 2535 6.095300 CCAAGAGCACACCAATATCAAATACA 59.905 38.462 0.00 0.00 0.00 2.29
2202 2591 0.320421 ACGGTAAGTGCAATGACGCT 60.320 50.000 0.00 0.00 0.00 5.07
2238 2627 3.314080 CCGTTACAGTGTTGGACAAATGT 59.686 43.478 0.00 5.76 35.37 2.71
2247 2636 0.758310 TGGACAAATGTGCCAGCCAA 60.758 50.000 2.51 0.00 35.36 4.52
2381 2778 6.474427 CGTCATGTACGTCCTAAACATTACAT 59.526 38.462 11.31 1.67 46.72 2.29
2460 2908 2.047560 GAGGCTACCAAACGGCGT 60.048 61.111 6.77 6.77 0.00 5.68
2464 2912 1.495951 GCTACCAAACGGCGTTCTG 59.504 57.895 26.96 22.89 0.00 3.02
2495 2988 4.436998 GAGCGCTACTGTGGCCGT 62.437 66.667 11.50 0.00 0.00 5.68
2525 3018 4.764679 TCACATGGTTTGTCATGCTAAC 57.235 40.909 0.00 0.00 46.08 2.34
2569 3062 7.768582 TGACGACCTTATATTGATTGATGTGTT 59.231 33.333 0.00 0.00 0.00 3.32
2643 4087 6.597672 TGTATGTGTCCACAGAATAATTGTCC 59.402 38.462 6.27 0.00 45.48 4.02
2644 4088 4.979335 TGTGTCCACAGAATAATTGTCCA 58.021 39.130 0.00 0.00 36.21 4.02
2715 4386 3.055385 CGGGAAGGAATCTTTAGTGACCA 60.055 47.826 0.00 0.00 32.52 4.02
2754 4425 1.001597 GATGGCGACTAGACCCGTTAG 60.002 57.143 0.00 0.00 0.00 2.34
2791 4465 7.233389 ACTAATGCTCGGATATTACTGATGT 57.767 36.000 0.00 0.00 0.00 3.06
2849 4532 1.825474 TCAAAAACCCGTCAAAAGCCA 59.175 42.857 0.00 0.00 0.00 4.75
2865 4548 8.726988 GTCAAAAGCCAGTCACTAATATGTTTA 58.273 33.333 0.00 0.00 0.00 2.01
2872 4555 6.423905 CCAGTCACTAATATGTTTATGACGGG 59.576 42.308 16.66 16.66 42.94 5.28
2915 4598 0.317160 TTCGCTTGTGTGACGGATCT 59.683 50.000 0.00 0.00 31.77 2.75
2926 4609 1.414550 TGACGGATCTTGGTTGTGACA 59.585 47.619 0.00 0.00 0.00 3.58
2930 4613 2.878406 CGGATCTTGGTTGTGACAGTTT 59.122 45.455 0.00 0.00 0.00 2.66
2984 4667 5.446031 CGTATTTCGTAAAACACCTCTCC 57.554 43.478 0.00 0.00 34.52 3.71
2988 4671 5.389859 TTTCGTAAAACACCTCTCCGATA 57.610 39.130 0.00 0.00 0.00 2.92
2989 4672 4.361451 TCGTAAAACACCTCTCCGATAC 57.639 45.455 0.00 0.00 0.00 2.24
2991 4674 3.855950 CGTAAAACACCTCTCCGATACAC 59.144 47.826 0.00 0.00 0.00 2.90
2996 4679 2.094854 ACACCTCTCCGATACACGTTTC 60.095 50.000 0.00 0.00 40.78 2.78
3036 4719 9.552114 CTAGTAAGGTACATATACATTGTACGC 57.448 37.037 0.00 3.66 46.68 4.42
3037 4720 7.944061 AGTAAGGTACATATACATTGTACGCA 58.056 34.615 0.00 0.00 46.68 5.24
3038 4721 8.582437 AGTAAGGTACATATACATTGTACGCAT 58.418 33.333 0.00 0.00 46.68 4.73
3039 4722 7.652300 AAGGTACATATACATTGTACGCATG 57.348 36.000 0.00 6.11 46.68 4.06
3040 4723 6.988522 AGGTACATATACATTGTACGCATGA 58.011 36.000 16.11 0.00 46.68 3.07
3041 4724 7.090808 AGGTACATATACATTGTACGCATGAG 58.909 38.462 16.11 0.00 46.68 2.90
3042 4725 7.039993 AGGTACATATACATTGTACGCATGAGA 60.040 37.037 2.50 0.91 46.68 3.27
3043 4726 7.759886 GGTACATATACATTGTACGCATGAGAT 59.240 37.037 2.50 6.92 46.68 2.75
3044 4727 9.140286 GTACATATACATTGTACGCATGAGATT 57.860 33.333 2.50 0.00 39.85 2.40
3045 4728 8.607441 ACATATACATTGTACGCATGAGATTT 57.393 30.769 2.50 0.00 0.00 2.17
3046 4729 9.705290 ACATATACATTGTACGCATGAGATTTA 57.295 29.630 2.50 0.00 0.00 1.40
3048 4731 5.409643 ACATTGTACGCATGAGATTTAGC 57.590 39.130 2.50 0.00 0.00 3.09
3049 4732 4.875536 ACATTGTACGCATGAGATTTAGCA 59.124 37.500 2.50 0.00 0.00 3.49
3050 4733 5.353956 ACATTGTACGCATGAGATTTAGCAA 59.646 36.000 2.50 0.00 0.00 3.91
3051 4734 4.857871 TGTACGCATGAGATTTAGCAAC 57.142 40.909 2.50 0.00 0.00 4.17
3052 4735 3.621268 TGTACGCATGAGATTTAGCAACC 59.379 43.478 2.50 0.00 0.00 3.77
3053 4736 2.710377 ACGCATGAGATTTAGCAACCA 58.290 42.857 2.50 0.00 0.00 3.67
3054 4737 3.081061 ACGCATGAGATTTAGCAACCAA 58.919 40.909 2.50 0.00 0.00 3.67
3055 4738 3.505680 ACGCATGAGATTTAGCAACCAAA 59.494 39.130 2.50 0.00 0.00 3.28
3056 4739 4.158394 ACGCATGAGATTTAGCAACCAAAT 59.842 37.500 2.50 0.00 0.00 2.32
3057 4740 5.104374 CGCATGAGATTTAGCAACCAAATT 58.896 37.500 0.00 0.00 0.00 1.82
3058 4741 6.127758 ACGCATGAGATTTAGCAACCAAATTA 60.128 34.615 2.50 0.00 0.00 1.40
3059 4742 6.919662 CGCATGAGATTTAGCAACCAAATTAT 59.080 34.615 0.00 0.00 0.00 1.28
3060 4743 7.096353 CGCATGAGATTTAGCAACCAAATTATG 60.096 37.037 0.00 0.00 0.00 1.90
3061 4744 7.922278 GCATGAGATTTAGCAACCAAATTATGA 59.078 33.333 0.00 0.00 0.00 2.15
3062 4745 9.806203 CATGAGATTTAGCAACCAAATTATGAA 57.194 29.630 0.00 0.00 0.00 2.57
3072 4755 9.816354 AGCAACCAAATTATGAATAAATACCAC 57.184 29.630 0.00 0.00 0.00 4.16
3073 4756 9.593134 GCAACCAAATTATGAATAAATACCACA 57.407 29.630 0.00 0.00 0.00 4.17
3214 4897 9.979578 ATTCATGAAATTGTACTTTGTAAAGCA 57.020 25.926 13.09 0.00 39.63 3.91
3215 4898 9.979578 TTCATGAAATTGTACTTTGTAAAGCAT 57.020 25.926 5.45 0.00 39.63 3.79
3237 4920 9.717942 AGCATAAAGTAAAAACAAATAATGGCA 57.282 25.926 0.00 0.00 0.00 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.084289 AAGTTTTCGCCGGTGATAGC 58.916 50.000 20.33 16.18 0.00 2.97
1 2 6.780706 AATATAAGTTTTCGCCGGTGATAG 57.219 37.500 20.33 0.00 0.00 2.08
2 3 8.143193 TCTAAATATAAGTTTTCGCCGGTGATA 58.857 33.333 20.33 11.84 0.00 2.15
3 4 6.987992 TCTAAATATAAGTTTTCGCCGGTGAT 59.012 34.615 20.33 5.85 0.00 3.06
4 5 6.339730 TCTAAATATAAGTTTTCGCCGGTGA 58.660 36.000 15.21 15.21 0.00 4.02
5 6 6.592798 TCTAAATATAAGTTTTCGCCGGTG 57.407 37.500 9.28 9.28 0.00 4.94
6 7 7.119553 TGTTTCTAAATATAAGTTTTCGCCGGT 59.880 33.333 1.90 0.00 0.00 5.28
7 8 7.465989 TGTTTCTAAATATAAGTTTTCGCCGG 58.534 34.615 0.00 0.00 0.00 6.13
8 9 8.385111 TCTGTTTCTAAATATAAGTTTTCGCCG 58.615 33.333 0.00 0.00 0.00 6.46
9 10 9.704098 CTCTGTTTCTAAATATAAGTTTTCGCC 57.296 33.333 0.00 0.00 0.00 5.54
10 11 9.704098 CCTCTGTTTCTAAATATAAGTTTTCGC 57.296 33.333 0.00 0.00 0.00 4.70
21 22 9.706691 CACAACTACTTCCTCTGTTTCTAAATA 57.293 33.333 0.00 0.00 0.00 1.40
22 23 7.173390 GCACAACTACTTCCTCTGTTTCTAAAT 59.827 37.037 0.00 0.00 0.00 1.40
23 24 6.482308 GCACAACTACTTCCTCTGTTTCTAAA 59.518 38.462 0.00 0.00 0.00 1.85
24 25 5.989777 GCACAACTACTTCCTCTGTTTCTAA 59.010 40.000 0.00 0.00 0.00 2.10
25 26 5.069914 TGCACAACTACTTCCTCTGTTTCTA 59.930 40.000 0.00 0.00 0.00 2.10
26 27 4.141711 TGCACAACTACTTCCTCTGTTTCT 60.142 41.667 0.00 0.00 0.00 2.52
27 28 4.024809 GTGCACAACTACTTCCTCTGTTTC 60.025 45.833 13.17 0.00 0.00 2.78
28 29 3.877508 GTGCACAACTACTTCCTCTGTTT 59.122 43.478 13.17 0.00 0.00 2.83
29 30 3.467803 GTGCACAACTACTTCCTCTGTT 58.532 45.455 13.17 0.00 0.00 3.16
30 31 2.545952 CGTGCACAACTACTTCCTCTGT 60.546 50.000 18.64 0.00 0.00 3.41
31 32 2.061773 CGTGCACAACTACTTCCTCTG 58.938 52.381 18.64 0.00 0.00 3.35
32 33 1.605712 GCGTGCACAACTACTTCCTCT 60.606 52.381 18.64 0.00 0.00 3.69
33 34 0.790814 GCGTGCACAACTACTTCCTC 59.209 55.000 18.64 0.00 0.00 3.71
34 35 0.393077 AGCGTGCACAACTACTTCCT 59.607 50.000 18.64 0.00 0.00 3.36
35 36 1.226746 AAGCGTGCACAACTACTTCC 58.773 50.000 18.64 0.00 0.00 3.46
36 37 3.493503 ACTAAAGCGTGCACAACTACTTC 59.506 43.478 18.64 0.00 0.00 3.01
37 38 3.463944 ACTAAAGCGTGCACAACTACTT 58.536 40.909 18.64 8.75 0.00 2.24
38 39 3.107642 ACTAAAGCGTGCACAACTACT 57.892 42.857 18.64 7.07 0.00 2.57
39 40 5.526010 AATACTAAAGCGTGCACAACTAC 57.474 39.130 18.64 0.01 0.00 2.73
40 41 6.645827 TGTAAATACTAAAGCGTGCACAACTA 59.354 34.615 18.64 1.35 0.00 2.24
41 42 5.467399 TGTAAATACTAAAGCGTGCACAACT 59.533 36.000 18.64 10.75 0.00 3.16
42 43 5.681880 TGTAAATACTAAAGCGTGCACAAC 58.318 37.500 18.64 8.30 0.00 3.32
43 44 5.926214 TGTAAATACTAAAGCGTGCACAA 57.074 34.783 18.64 0.00 0.00 3.33
44 45 5.697178 TCTTGTAAATACTAAAGCGTGCACA 59.303 36.000 18.64 0.00 0.00 4.57
45 46 6.160664 TCTTGTAAATACTAAAGCGTGCAC 57.839 37.500 6.82 6.82 0.00 4.57
46 47 6.978343 ATCTTGTAAATACTAAAGCGTGCA 57.022 33.333 0.00 0.00 0.00 4.57
47 48 7.461107 TCAATCTTGTAAATACTAAAGCGTGC 58.539 34.615 0.00 0.00 0.00 5.34
48 49 8.656849 ACTCAATCTTGTAAATACTAAAGCGTG 58.343 33.333 0.00 0.00 0.00 5.34
49 50 8.773404 ACTCAATCTTGTAAATACTAAAGCGT 57.227 30.769 0.00 0.00 0.00 5.07
58 59 9.758651 ACGCACATATACTCAATCTTGTAAATA 57.241 29.630 0.00 0.00 0.00 1.40
59 60 8.662781 ACGCACATATACTCAATCTTGTAAAT 57.337 30.769 0.00 0.00 0.00 1.40
60 61 9.758651 ATACGCACATATACTCAATCTTGTAAA 57.241 29.630 0.00 0.00 0.00 2.01
78 79 9.589111 TCTCTTAACAAAACATATATACGCACA 57.411 29.630 0.00 0.00 0.00 4.57
99 100 4.324641 GGGCCAGATAACCTTTTCTCTCTT 60.325 45.833 4.39 0.00 0.00 2.85
109 110 0.695803 CTCCCTGGGCCAGATAACCT 60.696 60.000 34.84 0.00 32.44 3.50
111 112 0.470341 GACTCCCTGGGCCAGATAAC 59.530 60.000 34.84 16.82 32.44 1.89
112 113 0.044092 TGACTCCCTGGGCCAGATAA 59.956 55.000 34.84 17.45 32.44 1.75
113 114 0.691078 GTGACTCCCTGGGCCAGATA 60.691 60.000 34.84 19.99 32.44 1.98
172 173 3.553095 AAGAGGCCAGCAACGGTCC 62.553 63.158 5.01 0.00 0.00 4.46
174 175 2.281761 CAAGAGGCCAGCAACGGT 60.282 61.111 5.01 0.00 0.00 4.83
215 218 1.108776 GCTGTTGTGCCATGGATGAT 58.891 50.000 18.40 0.00 0.00 2.45
218 221 1.180029 GAAGCTGTTGTGCCATGGAT 58.820 50.000 18.40 0.00 0.00 3.41
246 256 5.185828 AGAGAGGAGAGCTTCTTTCTTTCTC 59.814 44.000 0.00 0.00 36.72 2.87
294 304 2.044123 ATGAAGATCGAAACAGGCCC 57.956 50.000 0.00 0.00 0.00 5.80
298 308 4.175473 GAGCGAATGAAGATCGAAACAG 57.825 45.455 0.00 0.00 42.76 3.16
351 364 8.226448 GCATGCATGAAGTATATCTAACAAGAC 58.774 37.037 30.64 1.38 0.00 3.01
441 459 9.931210 GCTAATTTTCGTGCTAACAACTAATAT 57.069 29.630 0.00 0.00 0.00 1.28
442 460 8.111836 CGCTAATTTTCGTGCTAACAACTAATA 58.888 33.333 0.00 0.00 0.00 0.98
443 461 6.959311 CGCTAATTTTCGTGCTAACAACTAAT 59.041 34.615 0.00 0.00 0.00 1.73
444 462 6.301108 CGCTAATTTTCGTGCTAACAACTAA 58.699 36.000 0.00 0.00 0.00 2.24
445 463 5.669357 GCGCTAATTTTCGTGCTAACAACTA 60.669 40.000 0.00 0.00 34.05 2.24
446 464 4.708601 CGCTAATTTTCGTGCTAACAACT 58.291 39.130 0.00 0.00 0.00 3.16
447 465 3.297202 GCGCTAATTTTCGTGCTAACAAC 59.703 43.478 0.00 0.00 34.05 3.32
448 466 3.058846 TGCGCTAATTTTCGTGCTAACAA 60.059 39.130 9.73 0.00 37.53 2.83
449 467 2.480802 TGCGCTAATTTTCGTGCTAACA 59.519 40.909 9.73 0.00 37.53 2.41
450 468 3.091417 CTGCGCTAATTTTCGTGCTAAC 58.909 45.455 9.73 0.00 37.53 2.34
451 469 2.997303 TCTGCGCTAATTTTCGTGCTAA 59.003 40.909 9.73 0.00 37.53 3.09
452 470 2.603110 CTCTGCGCTAATTTTCGTGCTA 59.397 45.455 9.73 0.00 37.53 3.49
453 471 1.394917 CTCTGCGCTAATTTTCGTGCT 59.605 47.619 9.73 0.00 37.53 4.40
454 472 1.128692 ACTCTGCGCTAATTTTCGTGC 59.871 47.619 9.73 0.00 37.18 5.34
455 473 2.411748 TGACTCTGCGCTAATTTTCGTG 59.588 45.455 9.73 0.00 0.00 4.35
456 474 2.668457 CTGACTCTGCGCTAATTTTCGT 59.332 45.455 9.73 0.00 0.00 3.85
457 475 2.668457 ACTGACTCTGCGCTAATTTTCG 59.332 45.455 9.73 0.00 0.00 3.46
458 476 4.670227 AACTGACTCTGCGCTAATTTTC 57.330 40.909 9.73 0.00 0.00 2.29
459 477 4.091509 CGTAACTGACTCTGCGCTAATTTT 59.908 41.667 9.73 0.00 0.00 1.82
460 478 3.612860 CGTAACTGACTCTGCGCTAATTT 59.387 43.478 9.73 0.00 0.00 1.82
461 479 3.179830 CGTAACTGACTCTGCGCTAATT 58.820 45.455 9.73 0.00 0.00 1.40
462 480 2.163815 ACGTAACTGACTCTGCGCTAAT 59.836 45.455 9.73 0.00 0.00 1.73
463 481 1.538512 ACGTAACTGACTCTGCGCTAA 59.461 47.619 9.73 0.00 0.00 3.09
464 482 1.135774 CACGTAACTGACTCTGCGCTA 60.136 52.381 9.73 0.00 0.00 4.26
465 483 0.387367 CACGTAACTGACTCTGCGCT 60.387 55.000 9.73 0.00 0.00 5.92
466 484 0.386858 TCACGTAACTGACTCTGCGC 60.387 55.000 0.00 0.00 0.00 6.09
467 485 1.607713 CTCACGTAACTGACTCTGCG 58.392 55.000 0.00 0.00 0.00 5.18
468 486 1.335964 TGCTCACGTAACTGACTCTGC 60.336 52.381 0.00 0.00 0.00 4.26
469 487 2.706555 TGCTCACGTAACTGACTCTG 57.293 50.000 0.00 0.00 0.00 3.35
470 488 3.728076 TTTGCTCACGTAACTGACTCT 57.272 42.857 0.00 0.00 0.00 3.24
471 489 3.059570 CGATTTGCTCACGTAACTGACTC 59.940 47.826 0.00 0.00 0.00 3.36
472 490 2.987149 CGATTTGCTCACGTAACTGACT 59.013 45.455 0.00 0.00 0.00 3.41
473 491 2.472397 GCGATTTGCTCACGTAACTGAC 60.472 50.000 0.00 0.00 41.73 3.51
474 492 1.724623 GCGATTTGCTCACGTAACTGA 59.275 47.619 0.00 0.00 41.73 3.41
475 493 1.459209 TGCGATTTGCTCACGTAACTG 59.541 47.619 0.00 0.00 46.63 3.16
476 494 1.459592 GTGCGATTTGCTCACGTAACT 59.540 47.619 0.00 0.00 46.63 2.24
477 495 1.865725 GTGCGATTTGCTCACGTAAC 58.134 50.000 0.00 0.00 46.63 2.50
482 500 1.421485 CCTCGTGCGATTTGCTCAC 59.579 57.895 0.00 0.00 46.63 3.51
483 501 1.741401 CCCTCGTGCGATTTGCTCA 60.741 57.895 0.00 0.00 46.63 4.26
484 502 1.424493 CTCCCTCGTGCGATTTGCTC 61.424 60.000 0.00 0.00 46.63 4.26
485 503 1.448540 CTCCCTCGTGCGATTTGCT 60.449 57.895 0.00 0.00 46.63 3.91
486 504 3.093278 CTCCCTCGTGCGATTTGC 58.907 61.111 0.00 0.00 46.70 3.68
487 505 2.464459 GGCTCCCTCGTGCGATTTG 61.464 63.158 0.00 0.00 0.00 2.32
488 506 2.125106 GGCTCCCTCGTGCGATTT 60.125 61.111 0.00 0.00 0.00 2.17
489 507 2.650813 GATGGCTCCCTCGTGCGATT 62.651 60.000 0.00 0.00 28.62 3.34
490 508 3.157217 GATGGCTCCCTCGTGCGAT 62.157 63.158 0.00 0.00 30.76 4.58
491 509 3.838271 GATGGCTCCCTCGTGCGA 61.838 66.667 0.00 0.00 0.00 5.10
492 510 4.899239 GGATGGCTCCCTCGTGCG 62.899 72.222 0.00 0.00 35.28 5.34
493 511 3.785859 TGGATGGCTCCCTCGTGC 61.786 66.667 1.34 0.00 41.29 5.34
494 512 2.187946 GTGGATGGCTCCCTCGTG 59.812 66.667 1.34 0.00 41.29 4.35
495 513 3.461773 CGTGGATGGCTCCCTCGT 61.462 66.667 10.46 0.00 41.29 4.18
496 514 2.032860 AATCGTGGATGGCTCCCTCG 62.033 60.000 11.82 11.82 41.29 4.63
497 515 0.533755 CAATCGTGGATGGCTCCCTC 60.534 60.000 1.34 0.00 41.29 4.30
498 516 1.528824 CAATCGTGGATGGCTCCCT 59.471 57.895 1.34 0.00 41.29 4.20
499 517 4.147701 CAATCGTGGATGGCTCCC 57.852 61.111 1.34 0.00 41.29 4.30
509 527 5.525378 CCTTCCTTTTCTATCTCCAATCGTG 59.475 44.000 0.00 0.00 0.00 4.35
510 528 5.675538 CCTTCCTTTTCTATCTCCAATCGT 58.324 41.667 0.00 0.00 0.00 3.73
511 529 4.513318 GCCTTCCTTTTCTATCTCCAATCG 59.487 45.833 0.00 0.00 0.00 3.34
512 530 5.440610 TGCCTTCCTTTTCTATCTCCAATC 58.559 41.667 0.00 0.00 0.00 2.67
513 531 5.456921 TGCCTTCCTTTTCTATCTCCAAT 57.543 39.130 0.00 0.00 0.00 3.16
514 532 4.927267 TGCCTTCCTTTTCTATCTCCAA 57.073 40.909 0.00 0.00 0.00 3.53
515 533 4.785301 CATGCCTTCCTTTTCTATCTCCA 58.215 43.478 0.00 0.00 0.00 3.86
516 534 3.567585 GCATGCCTTCCTTTTCTATCTCC 59.432 47.826 6.36 0.00 0.00 3.71
517 535 4.202441 TGCATGCCTTCCTTTTCTATCTC 58.798 43.478 16.68 0.00 0.00 2.75
518 536 4.240881 TGCATGCCTTCCTTTTCTATCT 57.759 40.909 16.68 0.00 0.00 1.98
519 537 4.581824 TCATGCATGCCTTCCTTTTCTATC 59.418 41.667 22.25 0.00 0.00 2.08
520 538 4.539726 TCATGCATGCCTTCCTTTTCTAT 58.460 39.130 22.25 0.00 0.00 1.98
521 539 3.966979 TCATGCATGCCTTCCTTTTCTA 58.033 40.909 22.25 0.00 0.00 2.10
522 540 2.811410 TCATGCATGCCTTCCTTTTCT 58.189 42.857 22.25 0.00 0.00 2.52
523 541 3.814005 ATCATGCATGCCTTCCTTTTC 57.186 42.857 22.25 0.00 0.00 2.29
524 542 4.258543 CAAATCATGCATGCCTTCCTTTT 58.741 39.130 22.25 9.20 0.00 2.27
525 543 3.370103 CCAAATCATGCATGCCTTCCTTT 60.370 43.478 22.25 10.59 0.00 3.11
526 544 2.169769 CCAAATCATGCATGCCTTCCTT 59.830 45.455 22.25 5.52 0.00 3.36
527 545 1.760613 CCAAATCATGCATGCCTTCCT 59.239 47.619 22.25 1.52 0.00 3.36
528 546 1.202604 CCCAAATCATGCATGCCTTCC 60.203 52.381 22.25 0.00 0.00 3.46
529 547 1.483415 ACCCAAATCATGCATGCCTTC 59.517 47.619 22.25 0.00 0.00 3.46
530 548 1.208535 CACCCAAATCATGCATGCCTT 59.791 47.619 22.25 14.26 0.00 4.35
531 549 0.828022 CACCCAAATCATGCATGCCT 59.172 50.000 22.25 8.75 0.00 4.75
532 550 0.812412 GCACCCAAATCATGCATGCC 60.812 55.000 22.25 0.00 39.23 4.40
533 551 0.177141 AGCACCCAAATCATGCATGC 59.823 50.000 22.25 11.82 41.97 4.06
534 552 3.450578 GTTAGCACCCAAATCATGCATG 58.549 45.455 21.07 21.07 41.97 4.06
535 553 2.431782 GGTTAGCACCCAAATCATGCAT 59.568 45.455 0.00 0.00 41.97 3.96
536 554 1.824230 GGTTAGCACCCAAATCATGCA 59.176 47.619 0.00 0.00 41.97 3.96
537 555 2.584492 GGTTAGCACCCAAATCATGC 57.416 50.000 0.00 0.00 37.03 4.06
547 565 0.322546 CCTCTTGTGGGGTTAGCACC 60.323 60.000 0.00 0.00 43.37 5.01
548 566 0.690762 TCCTCTTGTGGGGTTAGCAC 59.309 55.000 0.00 0.00 0.00 4.40
549 567 1.668826 ATCCTCTTGTGGGGTTAGCA 58.331 50.000 0.00 0.00 0.00 3.49
550 568 2.369394 CAATCCTCTTGTGGGGTTAGC 58.631 52.381 0.00 0.00 0.00 3.09
551 569 2.945890 GCCAATCCTCTTGTGGGGTTAG 60.946 54.545 0.00 0.00 32.71 2.34
552 570 1.005450 GCCAATCCTCTTGTGGGGTTA 59.995 52.381 0.00 0.00 32.71 2.85
553 571 0.251787 GCCAATCCTCTTGTGGGGTT 60.252 55.000 0.00 0.00 32.71 4.11
554 572 1.384191 GCCAATCCTCTTGTGGGGT 59.616 57.895 0.00 0.00 32.71 4.95
555 573 1.380380 GGCCAATCCTCTTGTGGGG 60.380 63.158 0.00 0.00 32.71 4.96
556 574 1.750399 CGGCCAATCCTCTTGTGGG 60.750 63.158 2.24 0.00 32.71 4.61
557 575 2.409870 GCGGCCAATCCTCTTGTGG 61.410 63.158 2.24 0.00 35.39 4.17
558 576 1.033746 ATGCGGCCAATCCTCTTGTG 61.034 55.000 2.24 0.00 0.00 3.33
559 577 0.749454 GATGCGGCCAATCCTCTTGT 60.749 55.000 2.24 0.00 0.00 3.16
560 578 0.465097 AGATGCGGCCAATCCTCTTG 60.465 55.000 2.24 0.00 0.00 3.02
561 579 0.257039 AAGATGCGGCCAATCCTCTT 59.743 50.000 2.24 2.56 0.00 2.85
562 580 0.257039 AAAGATGCGGCCAATCCTCT 59.743 50.000 2.24 0.00 0.00 3.69
563 581 1.106285 AAAAGATGCGGCCAATCCTC 58.894 50.000 2.24 0.00 0.00 3.71
564 582 1.560505 AAAAAGATGCGGCCAATCCT 58.439 45.000 2.24 0.00 0.00 3.24
565 583 3.733443 ATAAAAAGATGCGGCCAATCC 57.267 42.857 2.24 0.00 0.00 3.01
566 584 4.507756 GGAAATAAAAAGATGCGGCCAATC 59.492 41.667 2.24 5.31 0.00 2.67
567 585 4.081198 TGGAAATAAAAAGATGCGGCCAAT 60.081 37.500 2.24 0.00 0.00 3.16
568 586 3.259374 TGGAAATAAAAAGATGCGGCCAA 59.741 39.130 2.24 0.00 0.00 4.52
569 587 2.828520 TGGAAATAAAAAGATGCGGCCA 59.171 40.909 2.24 0.00 0.00 5.36
570 588 3.518634 TGGAAATAAAAAGATGCGGCC 57.481 42.857 0.00 0.00 0.00 6.13
571 589 5.854431 TTTTGGAAATAAAAAGATGCGGC 57.146 34.783 0.00 0.00 0.00 6.53
591 609 8.711167 AGCCTAGCCAAGGATCGTTACTTTTT 62.711 42.308 6.90 0.00 41.34 1.94
592 610 7.325014 AGCCTAGCCAAGGATCGTTACTTTT 62.325 44.000 6.90 0.00 41.34 2.27
593 611 5.906616 AGCCTAGCCAAGGATCGTTACTTT 61.907 45.833 6.90 0.00 41.34 2.66
594 612 4.451760 AGCCTAGCCAAGGATCGTTACTT 61.452 47.826 6.90 0.00 41.34 2.24
595 613 2.955461 AGCCTAGCCAAGGATCGTTACT 60.955 50.000 6.90 4.47 41.34 2.24
596 614 1.413077 AGCCTAGCCAAGGATCGTTAC 59.587 52.381 6.90 0.00 41.34 2.50
597 615 1.789523 AGCCTAGCCAAGGATCGTTA 58.210 50.000 6.90 0.00 41.34 3.18
598 616 0.912486 AAGCCTAGCCAAGGATCGTT 59.088 50.000 6.90 0.00 45.74 3.85
599 617 0.912486 AAAGCCTAGCCAAGGATCGT 59.088 50.000 6.90 0.00 45.74 3.73
600 618 2.872858 GTTAAAGCCTAGCCAAGGATCG 59.127 50.000 6.90 0.00 45.74 3.69
601 619 3.879892 CAGTTAAAGCCTAGCCAAGGATC 59.120 47.826 6.90 0.00 45.74 3.36
605 623 2.162408 GCACAGTTAAAGCCTAGCCAAG 59.838 50.000 0.00 0.00 0.00 3.61
606 624 2.159382 GCACAGTTAAAGCCTAGCCAA 58.841 47.619 0.00 0.00 0.00 4.52
607 625 1.821216 GCACAGTTAAAGCCTAGCCA 58.179 50.000 0.00 0.00 0.00 4.75
608 626 0.727398 CGCACAGTTAAAGCCTAGCC 59.273 55.000 0.00 0.00 0.00 3.93
609 627 1.393883 GACGCACAGTTAAAGCCTAGC 59.606 52.381 0.00 0.00 0.00 3.42
610 628 2.000447 GGACGCACAGTTAAAGCCTAG 59.000 52.381 0.00 0.00 0.00 3.02
611 629 1.621814 AGGACGCACAGTTAAAGCCTA 59.378 47.619 0.00 0.00 0.00 3.93
612 630 0.396811 AGGACGCACAGTTAAAGCCT 59.603 50.000 0.00 0.00 0.00 4.58
613 631 1.730612 GTAGGACGCACAGTTAAAGCC 59.269 52.381 0.00 0.00 0.00 4.35
614 632 2.409975 TGTAGGACGCACAGTTAAAGC 58.590 47.619 0.00 0.00 0.00 3.51
615 633 6.238103 CCATAATGTAGGACGCACAGTTAAAG 60.238 42.308 0.00 0.00 0.00 1.85
616 634 5.583061 CCATAATGTAGGACGCACAGTTAAA 59.417 40.000 0.00 0.00 0.00 1.52
617 635 5.113383 CCATAATGTAGGACGCACAGTTAA 58.887 41.667 0.00 0.00 0.00 2.01
618 636 4.442332 CCCATAATGTAGGACGCACAGTTA 60.442 45.833 0.00 0.00 0.00 2.24
619 637 3.531538 CCATAATGTAGGACGCACAGTT 58.468 45.455 0.00 0.00 0.00 3.16
620 638 2.158957 CCCATAATGTAGGACGCACAGT 60.159 50.000 0.00 0.00 0.00 3.55
621 639 2.102420 TCCCATAATGTAGGACGCACAG 59.898 50.000 0.00 0.00 0.00 3.66
622 640 2.112190 TCCCATAATGTAGGACGCACA 58.888 47.619 0.00 0.00 0.00 4.57
623 641 2.902705 TCCCATAATGTAGGACGCAC 57.097 50.000 0.00 0.00 0.00 5.34
624 642 3.738982 CAATCCCATAATGTAGGACGCA 58.261 45.455 0.00 0.00 30.97 5.24
625 643 2.484264 GCAATCCCATAATGTAGGACGC 59.516 50.000 0.00 0.00 30.97 5.19
626 644 3.738982 TGCAATCCCATAATGTAGGACG 58.261 45.455 0.00 0.00 30.97 4.79
627 645 5.072741 ACATGCAATCCCATAATGTAGGAC 58.927 41.667 0.00 0.00 30.97 3.85
628 646 5.323382 ACATGCAATCCCATAATGTAGGA 57.677 39.130 0.00 0.00 29.93 2.94
629 647 7.523293 TTTACATGCAATCCCATAATGTAGG 57.477 36.000 0.00 0.00 35.70 3.18
630 648 8.246180 GGATTTACATGCAATCCCATAATGTAG 58.754 37.037 20.08 0.00 42.82 2.74
631 649 8.121305 GGATTTACATGCAATCCCATAATGTA 57.879 34.615 20.08 0.00 42.82 2.29
632 650 6.996509 GGATTTACATGCAATCCCATAATGT 58.003 36.000 20.08 0.00 42.82 2.71
641 659 6.149474 AGGCGTATTAGGATTTACATGCAATC 59.851 38.462 8.97 8.97 0.00 2.67
642 660 6.003950 AGGCGTATTAGGATTTACATGCAAT 58.996 36.000 0.00 0.00 0.00 3.56
643 661 5.373222 AGGCGTATTAGGATTTACATGCAA 58.627 37.500 0.00 0.00 0.00 4.08
644 662 4.968259 AGGCGTATTAGGATTTACATGCA 58.032 39.130 0.00 0.00 0.00 3.96
645 663 6.872020 TCTTAGGCGTATTAGGATTTACATGC 59.128 38.462 0.00 0.00 0.00 4.06
646 664 9.436957 AATCTTAGGCGTATTAGGATTTACATG 57.563 33.333 0.00 0.00 0.00 3.21
648 666 9.841295 AAAATCTTAGGCGTATTAGGATTTACA 57.159 29.630 10.82 0.00 36.44 2.41
650 668 9.280174 CCAAAATCTTAGGCGTATTAGGATTTA 57.720 33.333 10.82 0.00 36.44 1.40
651 669 7.230712 CCCAAAATCTTAGGCGTATTAGGATTT 59.769 37.037 0.00 0.00 38.00 2.17
652 670 6.715264 CCCAAAATCTTAGGCGTATTAGGATT 59.285 38.462 0.00 0.00 30.79 3.01
653 671 6.043938 TCCCAAAATCTTAGGCGTATTAGGAT 59.956 38.462 0.00 0.00 0.00 3.24
654 672 5.367352 TCCCAAAATCTTAGGCGTATTAGGA 59.633 40.000 0.00 0.00 0.00 2.94
655 673 5.617252 TCCCAAAATCTTAGGCGTATTAGG 58.383 41.667 0.00 0.00 0.00 2.69
656 674 6.204882 CCTTCCCAAAATCTTAGGCGTATTAG 59.795 42.308 0.00 0.00 0.00 1.73
657 675 6.059484 CCTTCCCAAAATCTTAGGCGTATTA 58.941 40.000 0.00 0.00 0.00 0.98
658 676 4.887655 CCTTCCCAAAATCTTAGGCGTATT 59.112 41.667 0.00 0.00 0.00 1.89
659 677 4.165372 TCCTTCCCAAAATCTTAGGCGTAT 59.835 41.667 0.00 0.00 0.00 3.06
660 678 3.520317 TCCTTCCCAAAATCTTAGGCGTA 59.480 43.478 0.00 0.00 0.00 4.42
661 679 2.307686 TCCTTCCCAAAATCTTAGGCGT 59.692 45.455 0.00 0.00 0.00 5.68
662 680 2.945668 CTCCTTCCCAAAATCTTAGGCG 59.054 50.000 0.00 0.00 0.00 5.52
663 681 3.291584 CCTCCTTCCCAAAATCTTAGGC 58.708 50.000 0.00 0.00 0.00 3.93
664 682 3.527665 TCCCTCCTTCCCAAAATCTTAGG 59.472 47.826 0.00 0.00 0.00 2.69
665 683 4.228438 ACTCCCTCCTTCCCAAAATCTTAG 59.772 45.833 0.00 0.00 0.00 2.18
666 684 4.183916 ACTCCCTCCTTCCCAAAATCTTA 58.816 43.478 0.00 0.00 0.00 2.10
667 685 2.996742 ACTCCCTCCTTCCCAAAATCTT 59.003 45.455 0.00 0.00 0.00 2.40
668 686 2.648838 ACTCCCTCCTTCCCAAAATCT 58.351 47.619 0.00 0.00 0.00 2.40
669 687 3.685835 GCTACTCCCTCCTTCCCAAAATC 60.686 52.174 0.00 0.00 0.00 2.17
670 688 2.242452 GCTACTCCCTCCTTCCCAAAAT 59.758 50.000 0.00 0.00 0.00 1.82
671 689 1.633945 GCTACTCCCTCCTTCCCAAAA 59.366 52.381 0.00 0.00 0.00 2.44
672 690 1.203440 AGCTACTCCCTCCTTCCCAAA 60.203 52.381 0.00 0.00 0.00 3.28
673 691 0.417841 AGCTACTCCCTCCTTCCCAA 59.582 55.000 0.00 0.00 0.00 4.12
674 692 0.325671 CAGCTACTCCCTCCTTCCCA 60.326 60.000 0.00 0.00 0.00 4.37
675 693 0.325765 ACAGCTACTCCCTCCTTCCC 60.326 60.000 0.00 0.00 0.00 3.97
676 694 1.574263 AACAGCTACTCCCTCCTTCC 58.426 55.000 0.00 0.00 0.00 3.46
677 695 4.223255 ACTTAAACAGCTACTCCCTCCTTC 59.777 45.833 0.00 0.00 0.00 3.46
678 696 4.168883 ACTTAAACAGCTACTCCCTCCTT 58.831 43.478 0.00 0.00 0.00 3.36
679 697 3.792515 ACTTAAACAGCTACTCCCTCCT 58.207 45.455 0.00 0.00 0.00 3.69
680 698 5.672421 TTACTTAAACAGCTACTCCCTCC 57.328 43.478 0.00 0.00 0.00 4.30
681 699 7.822822 TCAATTTACTTAAACAGCTACTCCCTC 59.177 37.037 0.00 0.00 0.00 4.30
682 700 7.686434 TCAATTTACTTAAACAGCTACTCCCT 58.314 34.615 0.00 0.00 0.00 4.20
683 701 7.916914 TCAATTTACTTAAACAGCTACTCCC 57.083 36.000 0.00 0.00 0.00 4.30
684 702 9.216117 TCTTCAATTTACTTAAACAGCTACTCC 57.784 33.333 0.00 0.00 0.00 3.85
795 827 1.532868 ACGCCGCTTATACGTAGGTAG 59.467 52.381 0.08 0.00 38.45 3.18
796 828 1.531149 GACGCCGCTTATACGTAGGTA 59.469 52.381 0.08 0.00 40.69 3.08
797 829 0.308993 GACGCCGCTTATACGTAGGT 59.691 55.000 0.08 0.00 40.69 3.08
798 830 0.308684 TGACGCCGCTTATACGTAGG 59.691 55.000 0.08 0.00 40.69 3.18
885 939 4.153117 CGTACCTACGTGACTACTGTTCTT 59.847 45.833 0.00 0.00 44.13 2.52
887 941 3.996032 CGTACCTACGTGACTACTGTTC 58.004 50.000 0.00 0.00 44.13 3.18
1035 1328 5.068460 GCCACCATTAGCACCATTAACATTA 59.932 40.000 0.00 0.00 0.00 1.90
1037 1330 3.384467 GCCACCATTAGCACCATTAACAT 59.616 43.478 0.00 0.00 0.00 2.71
1040 1333 2.020720 CGCCACCATTAGCACCATTAA 58.979 47.619 0.00 0.00 0.00 1.40
1049 1342 2.114670 CCACCAGCGCCACCATTAG 61.115 63.158 2.29 0.00 0.00 1.73
1061 1354 0.667993 AACATTGTTCGTGCCACCAG 59.332 50.000 0.00 0.00 0.00 4.00
1063 1356 1.601914 GGAAACATTGTTCGTGCCACC 60.602 52.381 1.83 0.00 0.00 4.61
1064 1357 1.766069 GGAAACATTGTTCGTGCCAC 58.234 50.000 1.83 0.00 0.00 5.01
1066 1359 0.386731 CCGGAAACATTGTTCGTGCC 60.387 55.000 0.00 2.19 0.00 5.01
1067 1360 0.309612 ACCGGAAACATTGTTCGTGC 59.690 50.000 9.46 0.00 0.00 5.34
1068 1361 1.924191 GCACCGGAAACATTGTTCGTG 60.924 52.381 9.46 8.20 0.00 4.35
1069 1362 0.309612 GCACCGGAAACATTGTTCGT 59.690 50.000 9.46 0.00 0.00 3.85
1070 1363 0.591170 AGCACCGGAAACATTGTTCG 59.409 50.000 9.46 3.23 0.00 3.95
1071 1364 1.930371 GCAGCACCGGAAACATTGTTC 60.930 52.381 9.46 0.00 0.00 3.18
1072 1365 0.031994 GCAGCACCGGAAACATTGTT 59.968 50.000 9.46 0.00 0.00 2.83
1073 1366 0.823356 AGCAGCACCGGAAACATTGT 60.823 50.000 9.46 0.00 0.00 2.71
1074 1367 0.387622 CAGCAGCACCGGAAACATTG 60.388 55.000 9.46 0.00 0.00 2.82
1075 1368 1.959085 CAGCAGCACCGGAAACATT 59.041 52.632 9.46 0.00 0.00 2.71
1076 1369 2.629656 GCAGCAGCACCGGAAACAT 61.630 57.895 9.46 0.00 41.58 2.71
1077 1370 3.286751 GCAGCAGCACCGGAAACA 61.287 61.111 9.46 0.00 41.58 2.83
1095 1388 2.436646 CAAGAATCGGCCAGCGGT 60.437 61.111 2.24 0.00 0.00 5.68
1129 1422 1.008538 GTTTCACCGTTGGCAGCTG 60.009 57.895 10.11 10.11 0.00 4.24
1138 1431 1.999735 CGCATACTGATGTTTCACCGT 59.000 47.619 0.00 0.00 35.30 4.83
1141 1434 3.435327 TGTTCCGCATACTGATGTTTCAC 59.565 43.478 0.00 0.00 35.30 3.18
1145 1438 4.270084 CGTATTGTTCCGCATACTGATGTT 59.730 41.667 0.00 0.00 35.30 2.71
1169 1462 0.839277 TGCTGCTGGGTATGCATACT 59.161 50.000 30.56 0.00 39.86 2.12
1192 1485 2.550699 TTTGGAGGGCCGCTGTATGG 62.551 60.000 7.35 0.00 36.79 2.74
1234 1527 0.756294 CGTCCACCATACCCATAGCA 59.244 55.000 0.00 0.00 0.00 3.49
1252 1545 1.373748 CGTACCCACCAGAACCACG 60.374 63.158 0.00 0.00 0.00 4.94
1276 1581 1.823041 GCTCGGGGTAGTCGTAGCT 60.823 63.158 0.00 0.00 32.42 3.32
1282 1587 2.521224 ATCGGGCTCGGGGTAGTC 60.521 66.667 5.94 0.00 36.95 2.59
1283 1588 2.838225 CATCGGGCTCGGGGTAGT 60.838 66.667 5.94 0.00 36.95 2.73
1286 1591 3.768833 ATACCATCGGGCTCGGGGT 62.769 63.158 23.40 23.40 43.23 4.95
1434 1746 3.833645 CCACCGCCGTAGCAGCTA 61.834 66.667 0.00 0.00 39.83 3.32
1451 1763 4.971125 GAGGATAGCCGCCACCGC 62.971 72.222 0.00 0.00 39.96 5.68
1457 1769 1.069935 GAACTGGGAGGATAGCCGC 59.930 63.158 0.00 0.00 39.96 6.53
1458 1770 1.051812 ATGAACTGGGAGGATAGCCG 58.948 55.000 0.00 0.00 39.96 5.52
1459 1771 3.481453 GAAATGAACTGGGAGGATAGCC 58.519 50.000 0.00 0.00 0.00 3.93
1460 1772 3.481453 GGAAATGAACTGGGAGGATAGC 58.519 50.000 0.00 0.00 0.00 2.97
1461 1773 3.134804 ACGGAAATGAACTGGGAGGATAG 59.865 47.826 0.00 0.00 0.00 2.08
1462 1774 3.112263 ACGGAAATGAACTGGGAGGATA 58.888 45.455 0.00 0.00 0.00 2.59
1463 1775 1.916181 ACGGAAATGAACTGGGAGGAT 59.084 47.619 0.00 0.00 0.00 3.24
1464 1776 1.278127 GACGGAAATGAACTGGGAGGA 59.722 52.381 0.00 0.00 0.00 3.71
1465 1777 1.279271 AGACGGAAATGAACTGGGAGG 59.721 52.381 0.00 0.00 0.00 4.30
1466 1778 2.289694 ACAGACGGAAATGAACTGGGAG 60.290 50.000 0.00 0.00 33.57 4.30
1467 1779 1.697432 ACAGACGGAAATGAACTGGGA 59.303 47.619 0.00 0.00 33.57 4.37
1468 1780 2.185004 ACAGACGGAAATGAACTGGG 57.815 50.000 0.00 0.00 33.57 4.45
1469 1781 3.262420 CCTACAGACGGAAATGAACTGG 58.738 50.000 0.00 0.00 33.57 4.00
1470 1782 3.926616 ACCTACAGACGGAAATGAACTG 58.073 45.455 0.00 0.00 35.14 3.16
1471 1783 4.081807 GGTACCTACAGACGGAAATGAACT 60.082 45.833 4.06 0.00 0.00 3.01
1472 1784 4.179298 GGTACCTACAGACGGAAATGAAC 58.821 47.826 4.06 0.00 0.00 3.18
1473 1785 3.833650 TGGTACCTACAGACGGAAATGAA 59.166 43.478 14.36 0.00 0.00 2.57
1474 1786 3.433343 TGGTACCTACAGACGGAAATGA 58.567 45.455 14.36 0.00 0.00 2.57
1475 1787 3.880047 TGGTACCTACAGACGGAAATG 57.120 47.619 14.36 0.00 0.00 2.32
1476 1788 3.067742 CGATGGTACCTACAGACGGAAAT 59.932 47.826 14.36 0.00 0.00 2.17
1477 1789 2.424601 CGATGGTACCTACAGACGGAAA 59.575 50.000 14.36 0.00 0.00 3.13
1478 1790 2.019249 CGATGGTACCTACAGACGGAA 58.981 52.381 14.36 0.00 0.00 4.30
1479 1791 1.210234 TCGATGGTACCTACAGACGGA 59.790 52.381 14.36 0.00 0.00 4.69
1480 1792 1.671979 TCGATGGTACCTACAGACGG 58.328 55.000 14.36 0.00 0.00 4.79
1481 1793 4.063689 AGTATCGATGGTACCTACAGACG 58.936 47.826 14.36 9.52 0.00 4.18
1482 1794 6.877855 TCATAGTATCGATGGTACCTACAGAC 59.122 42.308 14.36 4.53 0.00 3.51
1483 1795 7.012661 TCATAGTATCGATGGTACCTACAGA 57.987 40.000 14.36 7.84 0.00 3.41
1484 1796 7.679875 GCATCATAGTATCGATGGTACCTACAG 60.680 44.444 14.36 2.25 39.54 2.74
1485 1797 6.095021 GCATCATAGTATCGATGGTACCTACA 59.905 42.308 14.36 0.00 39.54 2.74
1486 1798 6.095021 TGCATCATAGTATCGATGGTACCTAC 59.905 42.308 14.36 6.80 39.54 3.18
1487 1799 6.184789 TGCATCATAGTATCGATGGTACCTA 58.815 40.000 14.36 0.00 39.54 3.08
1488 1800 5.016831 TGCATCATAGTATCGATGGTACCT 58.983 41.667 14.36 0.00 39.54 3.08
1489 1801 5.324784 TGCATCATAGTATCGATGGTACC 57.675 43.478 8.54 4.43 39.54 3.34
1490 1802 6.333416 ACATGCATCATAGTATCGATGGTAC 58.667 40.000 8.54 0.00 39.54 3.34
1491 1803 6.530019 ACATGCATCATAGTATCGATGGTA 57.470 37.500 8.54 0.00 39.54 3.25
1492 1804 5.411831 ACATGCATCATAGTATCGATGGT 57.588 39.130 8.54 0.00 39.54 3.55
1493 1805 5.461407 GCTACATGCATCATAGTATCGATGG 59.539 44.000 8.54 8.71 39.54 3.51
1494 1806 6.507890 GCTACATGCATCATAGTATCGATG 57.492 41.667 8.54 13.76 41.62 3.84
1509 1821 1.135859 GTGTGTTGAGCTGCTACATGC 60.136 52.381 0.15 0.00 43.25 4.06
1510 1822 2.096069 GTGTGTGTTGAGCTGCTACATG 60.096 50.000 0.15 0.00 34.85 3.21
1511 1823 2.146342 GTGTGTGTTGAGCTGCTACAT 58.854 47.619 0.15 0.00 34.85 2.29
1512 1824 1.138859 AGTGTGTGTTGAGCTGCTACA 59.861 47.619 0.15 0.79 0.00 2.74
1513 1825 1.871080 AGTGTGTGTTGAGCTGCTAC 58.129 50.000 0.15 0.00 0.00 3.58
1514 1826 2.628178 AGTAGTGTGTGTTGAGCTGCTA 59.372 45.455 0.15 0.00 0.00 3.49
1515 1827 1.414181 AGTAGTGTGTGTTGAGCTGCT 59.586 47.619 0.00 0.00 0.00 4.24
1516 1828 1.795286 GAGTAGTGTGTGTTGAGCTGC 59.205 52.381 0.00 0.00 0.00 5.25
1517 1829 3.097877 TGAGTAGTGTGTGTTGAGCTG 57.902 47.619 0.00 0.00 0.00 4.24
1518 1830 5.185828 TGATATGAGTAGTGTGTGTTGAGCT 59.814 40.000 0.00 0.00 0.00 4.09
1519 1831 5.289675 GTGATATGAGTAGTGTGTGTTGAGC 59.710 44.000 0.00 0.00 0.00 4.26
1520 1832 6.625362 AGTGATATGAGTAGTGTGTGTTGAG 58.375 40.000 0.00 0.00 0.00 3.02
1521 1833 6.208599 TGAGTGATATGAGTAGTGTGTGTTGA 59.791 38.462 0.00 0.00 0.00 3.18
1522 1834 6.389906 TGAGTGATATGAGTAGTGTGTGTTG 58.610 40.000 0.00 0.00 0.00 3.33
1523 1835 6.209589 ACTGAGTGATATGAGTAGTGTGTGTT 59.790 38.462 0.00 0.00 0.00 3.32
1524 1836 5.712446 ACTGAGTGATATGAGTAGTGTGTGT 59.288 40.000 0.00 0.00 0.00 3.72
1525 1837 6.201226 ACTGAGTGATATGAGTAGTGTGTG 57.799 41.667 0.00 0.00 0.00 3.82
1526 1838 6.842437 AACTGAGTGATATGAGTAGTGTGT 57.158 37.500 0.00 0.00 0.00 3.72
1527 1839 7.990917 ACTAACTGAGTGATATGAGTAGTGTG 58.009 38.462 0.00 0.00 36.87 3.82
1528 1840 8.462811 CAACTAACTGAGTGATATGAGTAGTGT 58.537 37.037 0.00 0.00 38.87 3.55
1529 1841 8.462811 ACAACTAACTGAGTGATATGAGTAGTG 58.537 37.037 0.00 0.00 38.87 2.74
1530 1842 8.582657 ACAACTAACTGAGTGATATGAGTAGT 57.417 34.615 0.00 0.00 38.87 2.73
1531 1843 9.295214 CAACAACTAACTGAGTGATATGAGTAG 57.705 37.037 0.00 0.00 38.87 2.57
1532 1844 8.803235 ACAACAACTAACTGAGTGATATGAGTA 58.197 33.333 0.00 0.00 38.87 2.59
1533 1845 7.600375 CACAACAACTAACTGAGTGATATGAGT 59.400 37.037 0.00 0.00 38.87 3.41
1534 1846 7.412346 GCACAACAACTAACTGAGTGATATGAG 60.412 40.741 0.00 0.00 38.87 2.90
1535 1847 6.368791 GCACAACAACTAACTGAGTGATATGA 59.631 38.462 0.00 0.00 38.87 2.15
1536 1848 6.369890 AGCACAACAACTAACTGAGTGATATG 59.630 38.462 0.00 0.00 38.87 1.78
1537 1849 6.369890 CAGCACAACAACTAACTGAGTGATAT 59.630 38.462 0.00 0.00 38.87 1.63
1538 1850 5.696270 CAGCACAACAACTAACTGAGTGATA 59.304 40.000 0.00 0.00 38.87 2.15
1539 1851 4.512944 CAGCACAACAACTAACTGAGTGAT 59.487 41.667 0.00 0.00 38.87 3.06
1540 1852 3.871006 CAGCACAACAACTAACTGAGTGA 59.129 43.478 0.00 0.00 38.87 3.41
1541 1853 3.871006 TCAGCACAACAACTAACTGAGTG 59.129 43.478 0.00 0.00 38.87 3.51
1542 1854 4.137116 TCAGCACAACAACTAACTGAGT 57.863 40.909 0.00 0.00 41.56 3.41
1543 1855 5.237127 TCAATCAGCACAACAACTAACTGAG 59.763 40.000 0.00 0.00 37.56 3.35
1544 1856 5.122519 TCAATCAGCACAACAACTAACTGA 58.877 37.500 0.00 0.00 38.42 3.41
1545 1857 5.422666 TCAATCAGCACAACAACTAACTG 57.577 39.130 0.00 0.00 0.00 3.16
1546 1858 5.048504 CCATCAATCAGCACAACAACTAACT 60.049 40.000 0.00 0.00 0.00 2.24
1547 1859 5.156355 CCATCAATCAGCACAACAACTAAC 58.844 41.667 0.00 0.00 0.00 2.34
1548 1860 4.321156 GCCATCAATCAGCACAACAACTAA 60.321 41.667 0.00 0.00 0.00 2.24
1549 1861 3.191162 GCCATCAATCAGCACAACAACTA 59.809 43.478 0.00 0.00 0.00 2.24
1550 1862 2.029649 GCCATCAATCAGCACAACAACT 60.030 45.455 0.00 0.00 0.00 3.16
1551 1863 2.029649 AGCCATCAATCAGCACAACAAC 60.030 45.455 0.00 0.00 0.00 3.32
1552 1864 2.229543 GAGCCATCAATCAGCACAACAA 59.770 45.455 0.00 0.00 0.00 2.83
1553 1865 1.814394 GAGCCATCAATCAGCACAACA 59.186 47.619 0.00 0.00 0.00 3.33
1554 1866 1.202110 CGAGCCATCAATCAGCACAAC 60.202 52.381 0.00 0.00 0.00 3.32
1555 1867 1.089112 CGAGCCATCAATCAGCACAA 58.911 50.000 0.00 0.00 0.00 3.33
1556 1868 0.249955 TCGAGCCATCAATCAGCACA 59.750 50.000 0.00 0.00 0.00 4.57
1557 1869 1.590932 ATCGAGCCATCAATCAGCAC 58.409 50.000 0.00 0.00 0.00 4.40
1558 1870 2.216046 GAATCGAGCCATCAATCAGCA 58.784 47.619 0.00 0.00 0.00 4.41
1559 1871 2.216046 TGAATCGAGCCATCAATCAGC 58.784 47.619 0.00 0.00 0.00 4.26
1560 1872 2.806818 CCTGAATCGAGCCATCAATCAG 59.193 50.000 0.00 0.00 32.72 2.90
1561 1873 2.435437 TCCTGAATCGAGCCATCAATCA 59.565 45.455 0.00 0.00 0.00 2.57
1562 1874 3.065655 CTCCTGAATCGAGCCATCAATC 58.934 50.000 0.00 0.00 0.00 2.67
1563 1875 2.224475 CCTCCTGAATCGAGCCATCAAT 60.224 50.000 0.00 0.00 0.00 2.57
1564 1876 1.139654 CCTCCTGAATCGAGCCATCAA 59.860 52.381 0.00 0.00 0.00 2.57
1565 1877 0.755079 CCTCCTGAATCGAGCCATCA 59.245 55.000 0.00 0.00 0.00 3.07
1566 1878 1.000731 CTCCTCCTGAATCGAGCCATC 59.999 57.143 0.00 0.00 0.00 3.51
1567 1879 1.047002 CTCCTCCTGAATCGAGCCAT 58.953 55.000 0.00 0.00 0.00 4.40
1568 1880 1.045350 CCTCCTCCTGAATCGAGCCA 61.045 60.000 0.00 0.00 0.00 4.75
1569 1881 0.757188 TCCTCCTCCTGAATCGAGCC 60.757 60.000 0.00 0.00 0.00 4.70
1570 1882 0.673437 CTCCTCCTCCTGAATCGAGC 59.327 60.000 0.00 0.00 0.00 5.03
1571 1883 1.327303 CCTCCTCCTCCTGAATCGAG 58.673 60.000 0.00 0.00 0.00 4.04
1572 1884 0.757188 GCCTCCTCCTCCTGAATCGA 60.757 60.000 0.00 0.00 0.00 3.59
1573 1885 1.745264 GCCTCCTCCTCCTGAATCG 59.255 63.158 0.00 0.00 0.00 3.34
1574 1886 1.745264 CGCCTCCTCCTCCTGAATC 59.255 63.158 0.00 0.00 0.00 2.52
1575 1887 1.764054 CCGCCTCCTCCTCCTGAAT 60.764 63.158 0.00 0.00 0.00 2.57
1576 1888 2.364317 CCGCCTCCTCCTCCTGAA 60.364 66.667 0.00 0.00 0.00 3.02
1594 1906 3.976701 GACCCCACCATCACAGCCG 62.977 68.421 0.00 0.00 0.00 5.52
1595 1907 2.044946 GACCCCACCATCACAGCC 60.045 66.667 0.00 0.00 0.00 4.85
1596 1908 1.377725 CTGACCCCACCATCACAGC 60.378 63.158 0.00 0.00 0.00 4.40
1597 1909 1.377725 GCTGACCCCACCATCACAG 60.378 63.158 0.00 0.00 0.00 3.66
1598 1910 1.714011 TTGCTGACCCCACCATCACA 61.714 55.000 0.00 0.00 0.00 3.58
1599 1911 1.074775 TTGCTGACCCCACCATCAC 59.925 57.895 0.00 0.00 0.00 3.06
1600 1912 1.074775 GTTGCTGACCCCACCATCA 59.925 57.895 0.00 0.00 0.00 3.07
1601 1913 2.040544 CGTTGCTGACCCCACCATC 61.041 63.158 0.00 0.00 0.00 3.51
1602 1914 2.034066 CGTTGCTGACCCCACCAT 59.966 61.111 0.00 0.00 0.00 3.55
1603 1915 4.947147 GCGTTGCTGACCCCACCA 62.947 66.667 0.00 0.00 0.00 4.17
1604 1916 2.741486 TAAGCGTTGCTGACCCCACC 62.741 60.000 0.00 0.00 39.62 4.61
1605 1917 1.302192 TAAGCGTTGCTGACCCCAC 60.302 57.895 0.00 0.00 39.62 4.61
1606 1918 1.302192 GTAAGCGTTGCTGACCCCA 60.302 57.895 0.00 0.00 39.62 4.96
1607 1919 2.388232 CGTAAGCGTTGCTGACCCC 61.388 63.158 0.76 0.00 36.72 4.95
1608 1920 2.388232 CCGTAAGCGTTGCTGACCC 61.388 63.158 0.76 0.00 36.72 4.46
1609 1921 1.352156 CTCCGTAAGCGTTGCTGACC 61.352 60.000 0.76 0.00 36.72 4.02
1610 1922 1.352156 CCTCCGTAAGCGTTGCTGAC 61.352 60.000 0.00 0.00 39.62 3.51
1611 1923 1.080093 CCTCCGTAAGCGTTGCTGA 60.080 57.895 0.00 0.00 39.62 4.26
1612 1924 2.100631 CCCTCCGTAAGCGTTGCTG 61.101 63.158 0.00 0.00 39.62 4.41
1613 1925 2.264794 CCCTCCGTAAGCGTTGCT 59.735 61.111 0.00 0.00 42.56 3.91
1614 1926 3.497031 GCCCTCCGTAAGCGTTGC 61.497 66.667 0.00 0.00 36.15 4.17
1615 1927 2.818274 GGCCCTCCGTAAGCGTTG 60.818 66.667 0.00 0.00 36.15 4.10
1636 1948 4.537433 ATCCGCGGCTTCTCCTGC 62.537 66.667 23.51 0.00 0.00 4.85
1637 1949 2.587194 CATCCGCGGCTTCTCCTG 60.587 66.667 23.51 4.91 0.00 3.86
1638 1950 2.759973 TCATCCGCGGCTTCTCCT 60.760 61.111 23.51 0.00 0.00 3.69
1639 1951 2.279784 CTCATCCGCGGCTTCTCC 60.280 66.667 23.51 0.00 0.00 3.71
1640 1952 2.964389 GCTCATCCGCGGCTTCTC 60.964 66.667 23.51 5.45 0.00 2.87
1649 1961 4.873129 CCACCCGACGCTCATCCG 62.873 72.222 0.00 0.00 0.00 4.18
1650 1962 4.530857 CCCACCCGACGCTCATCC 62.531 72.222 0.00 0.00 0.00 3.51
1651 1963 2.351336 CTACCCACCCGACGCTCATC 62.351 65.000 0.00 0.00 0.00 2.92
1652 1964 2.363276 TACCCACCCGACGCTCAT 60.363 61.111 0.00 0.00 0.00 2.90
1653 1965 3.066190 CTACCCACCCGACGCTCA 61.066 66.667 0.00 0.00 0.00 4.26
1654 1966 4.509737 GCTACCCACCCGACGCTC 62.510 72.222 0.00 0.00 0.00 5.03
1682 1994 0.541296 TACCCTCCATAGGCGGTAGC 60.541 60.000 0.00 0.00 42.14 3.58
1683 1995 1.254954 GTACCCTCCATAGGCGGTAG 58.745 60.000 3.08 0.00 42.14 3.18
1684 1996 0.178953 GGTACCCTCCATAGGCGGTA 60.179 60.000 0.00 0.00 42.14 4.02
1685 1997 1.458967 GGTACCCTCCATAGGCGGT 60.459 63.158 0.00 0.00 42.14 5.68
1686 1998 1.458777 TGGTACCCTCCATAGGCGG 60.459 63.158 10.07 0.00 42.14 6.13
1687 1999 2.050269 CTGGTACCCTCCATAGGCG 58.950 63.158 10.07 0.00 42.14 5.52
1688 2000 1.054406 TGCTGGTACCCTCCATAGGC 61.054 60.000 10.07 1.86 42.14 3.93
1689 2001 0.759346 GTGCTGGTACCCTCCATAGG 59.241 60.000 10.07 0.00 43.25 2.57
1690 2002 0.759346 GGTGCTGGTACCCTCCATAG 59.241 60.000 10.07 0.00 36.84 2.23
1691 2003 0.043485 TGGTGCTGGTACCCTCCATA 59.957 55.000 10.07 0.00 40.09 2.74
1692 2004 1.229820 TGGTGCTGGTACCCTCCAT 60.230 57.895 10.07 0.00 40.09 3.41
1693 2005 2.205749 TGGTGCTGGTACCCTCCA 59.794 61.111 10.07 8.58 40.09 3.86
1694 2006 1.562672 ATGTGGTGCTGGTACCCTCC 61.563 60.000 10.07 5.90 40.09 4.30
1695 2007 0.392998 CATGTGGTGCTGGTACCCTC 60.393 60.000 10.07 1.12 40.09 4.30
1696 2008 1.685224 CATGTGGTGCTGGTACCCT 59.315 57.895 10.07 0.00 40.09 4.34
1697 2009 1.378514 CCATGTGGTGCTGGTACCC 60.379 63.158 10.07 0.00 40.09 3.69
1698 2010 1.378514 CCCATGTGGTGCTGGTACC 60.379 63.158 4.43 4.43 41.24 3.34
1699 2011 2.046285 GCCCATGTGGTGCTGGTAC 61.046 63.158 0.00 0.00 36.04 3.34
1700 2012 2.354729 GCCCATGTGGTGCTGGTA 59.645 61.111 0.00 0.00 36.04 3.25
1709 2021 4.697756 ACCACGACCGCCCATGTG 62.698 66.667 0.00 0.00 0.00 3.21
1710 2022 4.697756 CACCACGACCGCCCATGT 62.698 66.667 0.00 0.00 0.00 3.21
1715 2027 3.777910 ATACCCACCACGACCGCC 61.778 66.667 0.00 0.00 0.00 6.13
1716 2028 2.510691 CATACCCACCACGACCGC 60.511 66.667 0.00 0.00 0.00 5.68
1717 2029 2.185867 CCATACCCACCACGACCG 59.814 66.667 0.00 0.00 0.00 4.79
1718 2030 1.078708 CACCATACCCACCACGACC 60.079 63.158 0.00 0.00 0.00 4.79
1719 2031 1.078708 CCACCATACCCACCACGAC 60.079 63.158 0.00 0.00 0.00 4.34
1720 2032 1.229241 TCCACCATACCCACCACGA 60.229 57.895 0.00 0.00 0.00 4.35
1721 2033 1.220749 CTCCACCATACCCACCACG 59.779 63.158 0.00 0.00 0.00 4.94
1722 2034 1.077716 GCTCCACCATACCCACCAC 60.078 63.158 0.00 0.00 0.00 4.16
1723 2035 1.229820 AGCTCCACCATACCCACCA 60.230 57.895 0.00 0.00 0.00 4.17
1724 2036 1.224592 CAGCTCCACCATACCCACC 59.775 63.158 0.00 0.00 0.00 4.61
1725 2037 1.224592 CCAGCTCCACCATACCCAC 59.775 63.158 0.00 0.00 0.00 4.61
1726 2038 1.229820 ACCAGCTCCACCATACCCA 60.230 57.895 0.00 0.00 0.00 4.51
1727 2039 1.224592 CACCAGCTCCACCATACCC 59.775 63.158 0.00 0.00 0.00 3.69
1728 2040 1.452108 GCACCAGCTCCACCATACC 60.452 63.158 0.00 0.00 37.91 2.73
1729 2041 4.225497 GCACCAGCTCCACCATAC 57.775 61.111 0.00 0.00 37.91 2.39
1749 2061 0.319641 GCCGTGGTAGCTATAGCCAC 60.320 60.000 21.17 17.52 46.61 5.01
1750 2062 1.802337 CGCCGTGGTAGCTATAGCCA 61.802 60.000 21.17 9.48 43.38 4.75
1783 2095 1.227263 CGGAGGATAACCACAGCCG 60.227 63.158 0.00 0.00 38.94 5.52
1787 2099 0.535335 GCAGTCGGAGGATAACCACA 59.465 55.000 0.00 0.00 38.94 4.17
1789 2101 0.824109 CTGCAGTCGGAGGATAACCA 59.176 55.000 5.25 0.00 38.94 3.67
1812 2136 6.753744 GCTACATGCATCATAAGTATCGATCA 59.246 38.462 0.00 0.00 42.31 2.92
1884 2213 1.069823 CCTCCTGAATCGACCCATCAG 59.930 57.143 10.70 10.70 40.17 2.90
2170 2535 1.203994 CTTACCGTCGGGATGAACAGT 59.796 52.381 17.28 0.00 36.97 3.55
2238 2627 2.795110 GCTTGTTGGTTGGCTGGCA 61.795 57.895 0.00 0.00 0.00 4.92
2247 2636 2.003937 ATTAAACCCCGCTTGTTGGT 57.996 45.000 0.00 0.00 0.00 3.67
2449 2897 3.284449 GCCAGAACGCCGTTTGGT 61.284 61.111 22.78 4.41 37.67 3.67
2460 2908 1.862201 CTCGTACACAAAACGCCAGAA 59.138 47.619 0.00 0.00 40.12 3.02
2464 2912 1.154727 CGCTCGTACACAAAACGCC 60.155 57.895 0.00 0.00 40.12 5.68
2468 2916 2.055838 CAGTAGCGCTCGTACACAAAA 58.944 47.619 16.34 0.00 0.00 2.44
2525 3018 3.668757 CGTCATTCAGTTCCATGTGCTTG 60.669 47.826 0.00 0.00 0.00 4.01
2623 4065 5.957842 TTGGACAATTATTCTGTGGACAC 57.042 39.130 0.00 0.00 0.00 3.67
2643 4087 9.807649 CCCAAACAGAAATAAGGAATATCTTTG 57.192 33.333 0.00 0.00 0.00 2.77
2644 4088 9.768215 TCCCAAACAGAAATAAGGAATATCTTT 57.232 29.630 0.00 0.00 0.00 2.52
2715 4386 8.474025 TCGCCATCTTTAATGTGGAAAAATAAT 58.526 29.630 11.56 0.00 34.94 1.28
2766 4440 7.600375 CACATCAGTAATATCCGAGCATTAGTT 59.400 37.037 0.00 0.00 0.00 2.24
2791 4465 3.554337 GCTTTAGGGACGAGTCTGAAACA 60.554 47.826 3.09 0.00 0.00 2.83
2849 4532 7.356089 TCCCGTCATAAACATATTAGTGACT 57.644 36.000 0.00 0.00 33.42 3.41
2865 4548 3.822940 TGTACTTTTGGTTTCCCGTCAT 58.177 40.909 0.00 0.00 0.00 3.06
2893 4576 1.705256 TCCGTCACACAAGCGAATAC 58.295 50.000 0.00 0.00 0.00 1.89
2898 4581 0.439985 CAAGATCCGTCACACAAGCG 59.560 55.000 0.00 0.00 0.00 4.68
2935 4618 6.630203 ATGACAACACTAGGTATGGGTTTA 57.370 37.500 0.00 0.00 0.00 2.01
3010 4693 9.552114 GCGTACAATGTATATGTACCTTACTAG 57.448 37.037 10.29 0.00 46.61 2.57
3011 4694 9.065798 TGCGTACAATGTATATGTACCTTACTA 57.934 33.333 10.29 0.00 46.61 1.82
3012 4695 7.944061 TGCGTACAATGTATATGTACCTTACT 58.056 34.615 10.29 0.00 46.61 2.24
3013 4696 8.644619 CATGCGTACAATGTATATGTACCTTAC 58.355 37.037 10.29 0.00 46.61 2.34
3014 4697 8.578151 TCATGCGTACAATGTATATGTACCTTA 58.422 33.333 10.29 0.03 46.61 2.69
3015 4698 7.438564 TCATGCGTACAATGTATATGTACCTT 58.561 34.615 10.29 0.00 46.61 3.50
3016 4699 6.988522 TCATGCGTACAATGTATATGTACCT 58.011 36.000 10.29 0.00 46.61 3.08
3017 4700 7.088272 TCTCATGCGTACAATGTATATGTACC 58.912 38.462 10.29 5.30 46.61 3.34
3018 4701 8.689251 ATCTCATGCGTACAATGTATATGTAC 57.311 34.615 0.00 6.73 46.11 2.90
3019 4702 9.705290 AAATCTCATGCGTACAATGTATATGTA 57.295 29.630 0.00 0.00 32.27 2.29
3020 4703 8.607441 AAATCTCATGCGTACAATGTATATGT 57.393 30.769 0.00 0.00 34.81 2.29
3022 4705 8.873830 GCTAAATCTCATGCGTACAATGTATAT 58.126 33.333 0.00 0.00 0.00 0.86
3023 4706 7.870445 TGCTAAATCTCATGCGTACAATGTATA 59.130 33.333 0.00 0.00 0.00 1.47
3024 4707 6.705825 TGCTAAATCTCATGCGTACAATGTAT 59.294 34.615 0.00 0.24 0.00 2.29
3025 4708 6.045955 TGCTAAATCTCATGCGTACAATGTA 58.954 36.000 5.66 0.00 0.00 2.29
3026 4709 4.875536 TGCTAAATCTCATGCGTACAATGT 59.124 37.500 5.66 0.00 0.00 2.71
3027 4710 5.408204 TGCTAAATCTCATGCGTACAATG 57.592 39.130 0.00 0.00 0.00 2.82
3028 4711 5.220854 GGTTGCTAAATCTCATGCGTACAAT 60.221 40.000 0.00 0.00 0.00 2.71
3029 4712 4.094294 GGTTGCTAAATCTCATGCGTACAA 59.906 41.667 0.00 0.00 0.00 2.41
3030 4713 3.621268 GGTTGCTAAATCTCATGCGTACA 59.379 43.478 0.00 0.00 0.00 2.90
3031 4714 3.621268 TGGTTGCTAAATCTCATGCGTAC 59.379 43.478 0.00 0.00 0.00 3.67
3032 4715 3.867857 TGGTTGCTAAATCTCATGCGTA 58.132 40.909 0.00 0.00 0.00 4.42
3033 4716 2.710377 TGGTTGCTAAATCTCATGCGT 58.290 42.857 0.00 0.00 0.00 5.24
3034 4717 3.763097 TTGGTTGCTAAATCTCATGCG 57.237 42.857 0.00 0.00 0.00 4.73
3035 4718 7.922278 TCATAATTTGGTTGCTAAATCTCATGC 59.078 33.333 0.00 0.00 0.00 4.06
3036 4719 9.806203 TTCATAATTTGGTTGCTAAATCTCATG 57.194 29.630 0.00 0.00 0.00 3.07
3046 4729 9.816354 GTGGTATTTATTCATAATTTGGTTGCT 57.184 29.630 0.00 0.00 0.00 3.91
3047 4730 9.593134 TGTGGTATTTATTCATAATTTGGTTGC 57.407 29.630 0.00 0.00 0.00 4.17
3188 4871 9.979578 TGCTTTACAAAGTACAATTTCATGAAT 57.020 25.926 9.40 0.00 38.28 2.57
3189 4872 9.979578 ATGCTTTACAAAGTACAATTTCATGAA 57.020 25.926 3.38 3.38 38.28 2.57
3211 4894 9.717942 TGCCATTATTTGTTTTTACTTTATGCT 57.282 25.926 0.00 0.00 0.00 3.79
3219 4902 9.276397 GCATGAATTGCCATTATTTGTTTTTAC 57.724 29.630 0.00 0.00 46.15 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.