Multiple sequence alignment - TraesCS7A01G157500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G157500 chr7A 100.000 2483 0 0 1 2483 110469446 110471928 0.000000e+00 4586.0
1 TraesCS7A01G157500 chr7A 93.506 77 3 2 1675 1749 704610896 704610972 2.020000e-21 113.0
2 TraesCS7A01G157500 chr7B 90.479 1922 111 34 469 2348 64115677 64117568 0.000000e+00 2470.0
3 TraesCS7A01G157500 chr7B 86.590 261 32 2 123 380 64086441 64086701 4.040000e-73 285.0
4 TraesCS7A01G157500 chr7B 92.857 140 10 0 2344 2483 64117592 64117731 1.160000e-48 204.0
5 TraesCS7A01G157500 chr7B 85.833 120 15 1 1 120 75587355 75587472 2.590000e-25 126.0
6 TraesCS7A01G157500 chr7D 90.879 1228 62 19 460 1668 105489836 105491032 0.000000e+00 1602.0
7 TraesCS7A01G157500 chr7D 82.413 779 75 24 1746 2483 105491029 105491786 7.540000e-175 623.0
8 TraesCS7A01G157500 chr1A 93.671 79 3 2 1674 1750 551582333 551582255 1.560000e-22 117.0
9 TraesCS7A01G157500 chr3D 89.011 91 8 2 1665 1753 609944973 609945063 7.260000e-21 111.0
10 TraesCS7A01G157500 chr3D 80.734 109 18 3 2 107 499961297 499961189 5.690000e-12 82.4
11 TraesCS7A01G157500 chr1B 88.172 93 9 2 1669 1759 559338974 559339066 2.610000e-20 110.0
12 TraesCS7A01G157500 chr3B 88.043 92 9 2 1665 1754 181496197 181496288 9.390000e-20 108.0
13 TraesCS7A01G157500 chr1D 92.105 76 4 2 1675 1748 415688368 415688443 3.380000e-19 106.0
14 TraesCS7A01G157500 chr5B 87.778 90 7 4 1661 1747 443734991 443734903 4.370000e-18 102.0
15 TraesCS7A01G157500 chr5D 81.739 115 21 0 6 120 335758520 335758634 2.030000e-16 97.1
16 TraesCS7A01G157500 chr5A 88.060 67 7 1 5 71 708843028 708842963 7.360000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G157500 chr7A 110469446 110471928 2482 False 4586.0 4586 100.000 1 2483 1 chr7A.!!$F1 2482
1 TraesCS7A01G157500 chr7B 64115677 64117731 2054 False 1337.0 2470 91.668 469 2483 2 chr7B.!!$F3 2014
2 TraesCS7A01G157500 chr7D 105489836 105491786 1950 False 1112.5 1602 86.646 460 2483 2 chr7D.!!$F1 2023

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
383 384 0.032615 ACAGTGGGAGGCTAGAGAGG 60.033 60.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1835 1887 0.235926 GAAGGAGAACAGTGCAACGC 59.764 55.0 0.0 0.0 45.86 4.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.905415 AAATCCAGATGAAGCACCCA 57.095 45.000 0.00 0.00 0.00 4.51
30 31 2.431954 AATCCAGATGAAGCACCCAG 57.568 50.000 0.00 0.00 0.00 4.45
31 32 1.588239 ATCCAGATGAAGCACCCAGA 58.412 50.000 0.00 0.00 0.00 3.86
32 33 0.907486 TCCAGATGAAGCACCCAGAG 59.093 55.000 0.00 0.00 0.00 3.35
33 34 0.747283 CCAGATGAAGCACCCAGAGC 60.747 60.000 0.00 0.00 0.00 4.09
34 35 1.088340 CAGATGAAGCACCCAGAGCG 61.088 60.000 0.00 0.00 37.01 5.03
35 36 2.437359 ATGAAGCACCCAGAGCGC 60.437 61.111 0.00 0.00 37.01 5.92
37 38 4.742201 GAAGCACCCAGAGCGCGA 62.742 66.667 12.10 0.00 37.01 5.87
41 42 4.662961 CACCCAGAGCGCGACACA 62.663 66.667 12.10 0.00 0.00 3.72
42 43 3.695606 ACCCAGAGCGCGACACAT 61.696 61.111 12.10 0.00 0.00 3.21
43 44 3.190849 CCCAGAGCGCGACACATG 61.191 66.667 12.10 0.00 0.00 3.21
44 45 3.190849 CCAGAGCGCGACACATGG 61.191 66.667 12.10 6.04 0.00 3.66
45 46 3.857854 CAGAGCGCGACACATGGC 61.858 66.667 12.10 0.00 0.00 4.40
68 69 3.127533 GGTGAGAGCGCGCCAAAT 61.128 61.111 30.33 9.44 38.32 2.32
69 70 2.099062 GTGAGAGCGCGCCAAATG 59.901 61.111 30.33 0.00 0.00 2.32
70 71 3.126879 TGAGAGCGCGCCAAATGG 61.127 61.111 30.33 0.00 38.53 3.16
80 81 3.202001 CCAAATGGCGCCGATCGT 61.202 61.111 23.90 1.45 41.07 3.73
81 82 2.760159 CCAAATGGCGCCGATCGTT 61.760 57.895 23.90 8.02 41.07 3.85
82 83 1.583451 CAAATGGCGCCGATCGTTG 60.583 57.895 23.90 16.34 41.07 4.10
83 84 2.760159 AAATGGCGCCGATCGTTGG 61.760 57.895 23.90 3.65 41.07 3.77
89 90 4.162690 GCCGATCGTTGGGAGGCT 62.163 66.667 15.09 0.00 44.06 4.58
90 91 2.107141 CCGATCGTTGGGAGGCTC 59.893 66.667 15.09 5.78 0.00 4.70
91 92 2.107141 CGATCGTTGGGAGGCTCC 59.893 66.667 25.80 25.80 35.23 4.70
92 93 2.107141 GATCGTTGGGAGGCTCCG 59.893 66.667 26.54 15.31 37.43 4.63
93 94 3.447025 GATCGTTGGGAGGCTCCGG 62.447 68.421 26.54 15.47 37.43 5.14
94 95 3.976490 ATCGTTGGGAGGCTCCGGA 62.976 63.158 26.54 19.85 37.43 5.14
95 96 3.702048 CGTTGGGAGGCTCCGGAA 61.702 66.667 26.54 18.50 37.43 4.30
96 97 2.269241 GTTGGGAGGCTCCGGAAG 59.731 66.667 26.54 0.46 37.43 3.46
108 109 2.651361 CGGAAGGTGCACTCGTCT 59.349 61.111 17.98 1.64 0.00 4.18
109 110 1.880894 CGGAAGGTGCACTCGTCTA 59.119 57.895 17.98 0.00 0.00 2.59
110 111 0.456312 CGGAAGGTGCACTCGTCTAC 60.456 60.000 17.98 0.00 0.00 2.59
111 112 0.889306 GGAAGGTGCACTCGTCTACT 59.111 55.000 17.98 0.00 0.00 2.57
112 113 2.089980 GGAAGGTGCACTCGTCTACTA 58.910 52.381 17.98 0.00 0.00 1.82
113 114 2.097791 GGAAGGTGCACTCGTCTACTAG 59.902 54.545 17.98 0.00 0.00 2.57
114 115 2.493414 AGGTGCACTCGTCTACTAGT 57.507 50.000 17.98 0.00 0.00 2.57
115 116 2.792878 AGGTGCACTCGTCTACTAGTT 58.207 47.619 17.98 0.00 0.00 2.24
116 117 2.488545 AGGTGCACTCGTCTACTAGTTG 59.511 50.000 17.98 0.00 0.00 3.16
117 118 2.251893 GTGCACTCGTCTACTAGTTGC 58.748 52.381 10.32 3.34 0.00 4.17
118 119 2.095161 GTGCACTCGTCTACTAGTTGCT 60.095 50.000 10.32 0.00 0.00 3.91
119 120 2.161808 TGCACTCGTCTACTAGTTGCTC 59.838 50.000 13.10 3.16 0.00 4.26
120 121 2.478200 GCACTCGTCTACTAGTTGCTCC 60.478 54.545 0.00 0.00 0.00 4.70
121 122 2.097791 CACTCGTCTACTAGTTGCTCCC 59.902 54.545 0.00 0.00 0.00 4.30
122 123 1.331138 CTCGTCTACTAGTTGCTCCCG 59.669 57.143 0.00 0.33 0.00 5.14
123 124 1.065926 TCGTCTACTAGTTGCTCCCGA 60.066 52.381 0.00 2.73 0.00 5.14
124 125 1.063764 CGTCTACTAGTTGCTCCCGAC 59.936 57.143 0.00 0.00 0.00 4.79
125 126 1.404748 GTCTACTAGTTGCTCCCGACC 59.595 57.143 0.00 0.00 0.00 4.79
126 127 1.005097 TCTACTAGTTGCTCCCGACCA 59.995 52.381 0.00 0.00 0.00 4.02
127 128 2.032620 CTACTAGTTGCTCCCGACCAT 58.967 52.381 0.00 0.00 0.00 3.55
128 129 2.154567 ACTAGTTGCTCCCGACCATA 57.845 50.000 0.00 0.00 0.00 2.74
129 130 2.679082 ACTAGTTGCTCCCGACCATAT 58.321 47.619 0.00 0.00 0.00 1.78
130 131 3.039011 ACTAGTTGCTCCCGACCATATT 58.961 45.455 0.00 0.00 0.00 1.28
131 132 2.332063 AGTTGCTCCCGACCATATTG 57.668 50.000 0.00 0.00 0.00 1.90
132 133 1.134098 AGTTGCTCCCGACCATATTGG 60.134 52.381 0.00 0.00 45.02 3.16
133 134 1.134220 GTTGCTCCCGACCATATTGGA 60.134 52.381 0.00 0.00 40.96 3.53
134 135 0.468226 TGCTCCCGACCATATTGGAC 59.532 55.000 0.00 0.00 40.96 4.02
141 142 1.849097 GACCATATTGGACGACGACC 58.151 55.000 9.52 9.52 40.96 4.79
142 143 0.462789 ACCATATTGGACGACGACCC 59.537 55.000 13.72 8.76 40.96 4.46
143 144 0.462375 CCATATTGGACGACGACCCA 59.538 55.000 13.72 11.20 40.96 4.51
144 145 1.070134 CCATATTGGACGACGACCCAT 59.930 52.381 13.72 10.63 40.96 4.00
145 146 2.484770 CCATATTGGACGACGACCCATT 60.485 50.000 13.72 12.12 40.96 3.16
146 147 2.589798 TATTGGACGACGACCCATTC 57.410 50.000 13.72 0.00 31.66 2.67
147 148 0.902531 ATTGGACGACGACCCATTCT 59.097 50.000 13.72 1.01 31.66 2.40
148 149 0.682852 TTGGACGACGACCCATTCTT 59.317 50.000 13.72 0.00 31.66 2.52
149 150 1.548081 TGGACGACGACCCATTCTTA 58.452 50.000 13.72 0.00 0.00 2.10
150 151 2.104967 TGGACGACGACCCATTCTTAT 58.895 47.619 13.72 0.00 0.00 1.73
151 152 2.100252 TGGACGACGACCCATTCTTATC 59.900 50.000 13.72 0.00 0.00 1.75
152 153 2.361438 GGACGACGACCCATTCTTATCT 59.639 50.000 0.00 0.00 0.00 1.98
153 154 3.550436 GGACGACGACCCATTCTTATCTC 60.550 52.174 0.00 0.00 0.00 2.75
154 155 3.288964 ACGACGACCCATTCTTATCTCT 58.711 45.455 0.00 0.00 0.00 3.10
155 156 3.066900 ACGACGACCCATTCTTATCTCTG 59.933 47.826 0.00 0.00 0.00 3.35
156 157 3.315470 CGACGACCCATTCTTATCTCTGA 59.685 47.826 0.00 0.00 0.00 3.27
157 158 4.202020 CGACGACCCATTCTTATCTCTGAA 60.202 45.833 0.00 0.00 0.00 3.02
158 159 5.661458 GACGACCCATTCTTATCTCTGAAA 58.339 41.667 0.00 0.00 0.00 2.69
159 160 6.240549 ACGACCCATTCTTATCTCTGAAAT 57.759 37.500 0.00 0.00 0.00 2.17
160 161 6.653989 ACGACCCATTCTTATCTCTGAAATT 58.346 36.000 0.00 0.00 0.00 1.82
161 162 6.540189 ACGACCCATTCTTATCTCTGAAATTG 59.460 38.462 0.00 0.00 0.00 2.32
162 163 6.512415 CGACCCATTCTTATCTCTGAAATTGC 60.512 42.308 0.00 0.00 0.00 3.56
163 164 6.430007 ACCCATTCTTATCTCTGAAATTGCT 58.570 36.000 0.00 0.00 0.00 3.91
164 165 6.545298 ACCCATTCTTATCTCTGAAATTGCTC 59.455 38.462 0.00 0.00 0.00 4.26
165 166 6.771749 CCCATTCTTATCTCTGAAATTGCTCT 59.228 38.462 0.00 0.00 0.00 4.09
166 167 7.284944 CCCATTCTTATCTCTGAAATTGCTCTT 59.715 37.037 0.00 0.00 0.00 2.85
167 168 9.334947 CCATTCTTATCTCTGAAATTGCTCTTA 57.665 33.333 0.00 0.00 0.00 2.10
170 171 9.593134 TTCTTATCTCTGAAATTGCTCTTAGAC 57.407 33.333 0.00 0.00 0.00 2.59
171 172 8.976353 TCTTATCTCTGAAATTGCTCTTAGACT 58.024 33.333 0.00 0.00 0.00 3.24
172 173 9.598517 CTTATCTCTGAAATTGCTCTTAGACTT 57.401 33.333 0.00 0.00 0.00 3.01
173 174 9.950496 TTATCTCTGAAATTGCTCTTAGACTTT 57.050 29.630 0.00 0.00 0.00 2.66
174 175 7.664082 TCTCTGAAATTGCTCTTAGACTTTG 57.336 36.000 0.00 0.00 0.00 2.77
175 176 6.148480 TCTCTGAAATTGCTCTTAGACTTTGC 59.852 38.462 0.00 0.00 0.00 3.68
176 177 5.182001 TCTGAAATTGCTCTTAGACTTTGCC 59.818 40.000 0.00 0.00 0.00 4.52
177 178 4.826733 TGAAATTGCTCTTAGACTTTGCCA 59.173 37.500 0.00 0.00 0.00 4.92
178 179 4.773323 AATTGCTCTTAGACTTTGCCAC 57.227 40.909 0.00 0.00 0.00 5.01
179 180 3.492102 TTGCTCTTAGACTTTGCCACT 57.508 42.857 0.00 0.00 0.00 4.00
180 181 4.617253 TTGCTCTTAGACTTTGCCACTA 57.383 40.909 0.00 0.00 0.00 2.74
181 182 4.193826 TGCTCTTAGACTTTGCCACTAG 57.806 45.455 0.00 0.00 0.00 2.57
182 183 3.578716 TGCTCTTAGACTTTGCCACTAGT 59.421 43.478 0.00 0.00 0.00 2.57
183 184 4.040461 TGCTCTTAGACTTTGCCACTAGTT 59.960 41.667 0.00 0.00 0.00 2.24
184 185 4.998033 GCTCTTAGACTTTGCCACTAGTTT 59.002 41.667 0.00 0.00 0.00 2.66
185 186 5.106908 GCTCTTAGACTTTGCCACTAGTTTG 60.107 44.000 0.00 0.00 0.00 2.93
186 187 5.305585 TCTTAGACTTTGCCACTAGTTTGG 58.694 41.667 0.00 0.00 39.98 3.28
196 197 3.426615 CCACTAGTTTGGCCCATTAACA 58.573 45.455 0.00 0.00 0.00 2.41
197 198 3.829601 CCACTAGTTTGGCCCATTAACAA 59.170 43.478 0.00 0.00 0.00 2.83
198 199 4.321675 CCACTAGTTTGGCCCATTAACAAC 60.322 45.833 0.00 0.00 0.00 3.32
199 200 4.279671 CACTAGTTTGGCCCATTAACAACA 59.720 41.667 0.00 0.00 0.00 3.33
200 201 3.744238 AGTTTGGCCCATTAACAACAC 57.256 42.857 0.00 0.00 0.00 3.32
201 202 3.034635 AGTTTGGCCCATTAACAACACA 58.965 40.909 0.00 0.00 0.00 3.72
202 203 3.645687 AGTTTGGCCCATTAACAACACAT 59.354 39.130 0.00 0.00 0.00 3.21
203 204 3.674528 TTGGCCCATTAACAACACATG 57.325 42.857 0.00 0.00 0.00 3.21
204 205 1.898472 TGGCCCATTAACAACACATGG 59.102 47.619 0.00 0.00 37.76 3.66
205 206 1.405391 GGCCCATTAACAACACATGGC 60.405 52.381 0.00 0.00 36.83 4.40
206 207 1.405391 GCCCATTAACAACACATGGCC 60.405 52.381 0.00 0.00 36.83 5.36
207 208 2.178580 CCCATTAACAACACATGGCCT 58.821 47.619 3.32 0.00 36.83 5.19
208 209 3.360867 CCCATTAACAACACATGGCCTA 58.639 45.455 3.32 0.00 36.83 3.93
209 210 3.766591 CCCATTAACAACACATGGCCTAA 59.233 43.478 3.32 0.00 36.83 2.69
210 211 4.142182 CCCATTAACAACACATGGCCTAAG 60.142 45.833 3.32 0.00 36.83 2.18
211 212 4.704540 CCATTAACAACACATGGCCTAAGA 59.295 41.667 3.32 0.00 31.32 2.10
212 213 5.184864 CCATTAACAACACATGGCCTAAGAA 59.815 40.000 3.32 0.00 31.32 2.52
213 214 5.957842 TTAACAACACATGGCCTAAGAAG 57.042 39.130 3.32 0.00 0.00 2.85
214 215 3.788227 ACAACACATGGCCTAAGAAGA 57.212 42.857 3.32 0.00 0.00 2.87
215 216 4.098914 ACAACACATGGCCTAAGAAGAA 57.901 40.909 3.32 0.00 0.00 2.52
216 217 4.074970 ACAACACATGGCCTAAGAAGAAG 58.925 43.478 3.32 0.00 0.00 2.85
217 218 4.074970 CAACACATGGCCTAAGAAGAAGT 58.925 43.478 3.32 0.00 0.00 3.01
218 219 3.944087 ACACATGGCCTAAGAAGAAGTC 58.056 45.455 3.32 0.00 0.00 3.01
219 220 3.584848 ACACATGGCCTAAGAAGAAGTCT 59.415 43.478 3.32 0.00 38.69 3.24
220 221 4.777896 ACACATGGCCTAAGAAGAAGTCTA 59.222 41.667 3.32 0.00 34.56 2.59
221 222 5.426833 ACACATGGCCTAAGAAGAAGTCTAT 59.573 40.000 3.32 0.00 34.56 1.98
222 223 6.069963 ACACATGGCCTAAGAAGAAGTCTATT 60.070 38.462 3.32 0.00 34.56 1.73
223 224 6.259608 CACATGGCCTAAGAAGAAGTCTATTG 59.740 42.308 3.32 0.00 34.56 1.90
224 225 5.359194 TGGCCTAAGAAGAAGTCTATTGG 57.641 43.478 3.32 0.00 34.56 3.16
225 226 4.130857 GGCCTAAGAAGAAGTCTATTGGC 58.869 47.826 0.00 0.00 41.55 4.52
226 227 4.130857 GCCTAAGAAGAAGTCTATTGGCC 58.869 47.826 0.00 0.00 38.84 5.36
227 228 4.709250 CCTAAGAAGAAGTCTATTGGCCC 58.291 47.826 0.00 0.00 34.56 5.80
228 229 2.990066 AGAAGAAGTCTATTGGCCCG 57.010 50.000 0.00 0.00 33.56 6.13
229 230 2.188817 AGAAGAAGTCTATTGGCCCGT 58.811 47.619 0.00 0.00 33.56 5.28
230 231 2.093447 AGAAGAAGTCTATTGGCCCGTG 60.093 50.000 0.00 0.00 33.56 4.94
231 232 0.107654 AGAAGTCTATTGGCCCGTGC 60.108 55.000 0.00 0.00 0.00 5.34
232 233 0.107654 GAAGTCTATTGGCCCGTGCT 60.108 55.000 0.00 0.00 37.74 4.40
233 234 0.328258 AAGTCTATTGGCCCGTGCTT 59.672 50.000 0.00 0.00 37.74 3.91
234 235 0.107654 AGTCTATTGGCCCGTGCTTC 60.108 55.000 0.00 0.00 37.74 3.86
235 236 1.153449 TCTATTGGCCCGTGCTTCG 60.153 57.895 0.00 0.00 37.74 3.79
236 237 2.822255 TATTGGCCCGTGCTTCGC 60.822 61.111 0.00 0.00 38.35 4.70
237 238 3.323758 TATTGGCCCGTGCTTCGCT 62.324 57.895 0.00 0.00 38.35 4.93
238 239 2.813226 TATTGGCCCGTGCTTCGCTT 62.813 55.000 0.00 0.00 38.35 4.68
239 240 4.947147 TGGCCCGTGCTTCGCTTT 62.947 61.111 0.00 0.00 38.35 3.51
240 241 4.404654 GGCCCGTGCTTCGCTTTG 62.405 66.667 0.00 0.00 38.35 2.77
241 242 3.660111 GCCCGTGCTTCGCTTTGT 61.660 61.111 0.00 0.00 38.35 2.83
242 243 3.030652 CCCGTGCTTCGCTTTGTT 58.969 55.556 0.00 0.00 38.35 2.83
243 244 1.358759 CCCGTGCTTCGCTTTGTTT 59.641 52.632 0.00 0.00 38.35 2.83
244 245 0.589223 CCCGTGCTTCGCTTTGTTTA 59.411 50.000 0.00 0.00 38.35 2.01
245 246 1.002251 CCCGTGCTTCGCTTTGTTTAA 60.002 47.619 0.00 0.00 38.35 1.52
246 247 2.041244 CCGTGCTTCGCTTTGTTTAAC 58.959 47.619 0.00 0.00 38.35 2.01
247 248 2.539953 CCGTGCTTCGCTTTGTTTAACA 60.540 45.455 0.00 0.00 38.35 2.41
248 249 2.462565 CGTGCTTCGCTTTGTTTAACAC 59.537 45.455 0.00 0.00 0.00 3.32
249 250 3.691498 GTGCTTCGCTTTGTTTAACACT 58.309 40.909 0.00 0.00 0.00 3.55
250 251 3.482110 GTGCTTCGCTTTGTTTAACACTG 59.518 43.478 0.00 0.00 0.00 3.66
251 252 2.467673 GCTTCGCTTTGTTTAACACTGC 59.532 45.455 0.00 4.46 0.00 4.40
252 253 2.766970 TCGCTTTGTTTAACACTGCC 57.233 45.000 13.18 0.00 0.00 4.85
253 254 2.017782 TCGCTTTGTTTAACACTGCCA 58.982 42.857 13.18 1.65 0.00 4.92
254 255 2.116366 CGCTTTGTTTAACACTGCCAC 58.884 47.619 13.18 0.00 0.00 5.01
255 256 2.223479 CGCTTTGTTTAACACTGCCACT 60.223 45.455 13.18 0.00 0.00 4.00
256 257 3.115554 GCTTTGTTTAACACTGCCACTG 58.884 45.455 0.00 0.00 0.00 3.66
257 258 2.861462 TTGTTTAACACTGCCACTGC 57.139 45.000 0.00 0.00 38.26 4.40
258 259 0.660488 TGTTTAACACTGCCACTGCG 59.340 50.000 0.00 0.00 41.78 5.18
259 260 0.661020 GTTTAACACTGCCACTGCGT 59.339 50.000 0.00 0.00 41.78 5.24
260 261 0.660488 TTTAACACTGCCACTGCGTG 59.340 50.000 2.27 2.27 43.14 5.34
273 274 2.510238 GCGTGGAGCTGCTAGGTG 60.510 66.667 6.82 0.00 44.04 4.00
274 275 2.185350 CGTGGAGCTGCTAGGTGG 59.815 66.667 6.82 0.00 0.00 4.61
275 276 2.650116 CGTGGAGCTGCTAGGTGGT 61.650 63.158 6.82 0.00 0.00 4.16
276 277 1.320344 CGTGGAGCTGCTAGGTGGTA 61.320 60.000 6.82 0.00 0.00 3.25
277 278 1.123928 GTGGAGCTGCTAGGTGGTAT 58.876 55.000 6.82 0.00 0.00 2.73
278 279 1.123077 TGGAGCTGCTAGGTGGTATG 58.877 55.000 6.82 0.00 0.00 2.39
279 280 1.123928 GGAGCTGCTAGGTGGTATGT 58.876 55.000 0.15 0.00 0.00 2.29
280 281 1.486726 GGAGCTGCTAGGTGGTATGTT 59.513 52.381 0.15 0.00 0.00 2.71
281 282 2.092914 GGAGCTGCTAGGTGGTATGTTT 60.093 50.000 0.15 0.00 0.00 2.83
282 283 3.610911 GAGCTGCTAGGTGGTATGTTTT 58.389 45.455 0.15 0.00 0.00 2.43
283 284 3.347216 AGCTGCTAGGTGGTATGTTTTG 58.653 45.455 0.00 0.00 0.00 2.44
284 285 2.423538 GCTGCTAGGTGGTATGTTTTGG 59.576 50.000 0.00 0.00 0.00 3.28
285 286 3.686016 CTGCTAGGTGGTATGTTTTGGT 58.314 45.455 0.00 0.00 0.00 3.67
286 287 4.079253 CTGCTAGGTGGTATGTTTTGGTT 58.921 43.478 0.00 0.00 0.00 3.67
287 288 3.823873 TGCTAGGTGGTATGTTTTGGTTG 59.176 43.478 0.00 0.00 0.00 3.77
288 289 3.824443 GCTAGGTGGTATGTTTTGGTTGT 59.176 43.478 0.00 0.00 0.00 3.32
289 290 4.320935 GCTAGGTGGTATGTTTTGGTTGTG 60.321 45.833 0.00 0.00 0.00 3.33
290 291 3.904717 AGGTGGTATGTTTTGGTTGTGA 58.095 40.909 0.00 0.00 0.00 3.58
291 292 4.479158 AGGTGGTATGTTTTGGTTGTGAT 58.521 39.130 0.00 0.00 0.00 3.06
292 293 4.898861 AGGTGGTATGTTTTGGTTGTGATT 59.101 37.500 0.00 0.00 0.00 2.57
293 294 5.010617 AGGTGGTATGTTTTGGTTGTGATTC 59.989 40.000 0.00 0.00 0.00 2.52
294 295 4.915085 GTGGTATGTTTTGGTTGTGATTCG 59.085 41.667 0.00 0.00 0.00 3.34
295 296 4.822350 TGGTATGTTTTGGTTGTGATTCGA 59.178 37.500 0.00 0.00 0.00 3.71
296 297 5.151389 GGTATGTTTTGGTTGTGATTCGAC 58.849 41.667 0.00 0.00 0.00 4.20
303 304 3.604875 GGTTGTGATTCGACCTCCTAA 57.395 47.619 0.00 0.00 44.97 2.69
304 305 3.934068 GGTTGTGATTCGACCTCCTAAA 58.066 45.455 0.00 0.00 44.97 1.85
305 306 4.320870 GGTTGTGATTCGACCTCCTAAAA 58.679 43.478 0.00 0.00 44.97 1.52
306 307 4.941873 GGTTGTGATTCGACCTCCTAAAAT 59.058 41.667 0.00 0.00 44.97 1.82
307 308 5.414765 GGTTGTGATTCGACCTCCTAAAATT 59.585 40.000 0.00 0.00 44.97 1.82
308 309 6.072119 GGTTGTGATTCGACCTCCTAAAATTT 60.072 38.462 0.00 0.00 44.97 1.82
309 310 7.120138 GGTTGTGATTCGACCTCCTAAAATTTA 59.880 37.037 0.00 0.00 44.97 1.40
310 311 8.508875 GTTGTGATTCGACCTCCTAAAATTTAA 58.491 33.333 0.00 0.00 0.00 1.52
311 312 8.036273 TGTGATTCGACCTCCTAAAATTTAAC 57.964 34.615 0.00 0.00 0.00 2.01
312 313 7.881232 TGTGATTCGACCTCCTAAAATTTAACT 59.119 33.333 0.00 0.00 0.00 2.24
313 314 8.388853 GTGATTCGACCTCCTAAAATTTAACTC 58.611 37.037 0.00 0.00 0.00 3.01
314 315 7.551617 TGATTCGACCTCCTAAAATTTAACTCC 59.448 37.037 0.00 0.00 0.00 3.85
315 316 5.413499 TCGACCTCCTAAAATTTAACTCCG 58.587 41.667 0.00 0.00 0.00 4.63
316 317 5.047092 TCGACCTCCTAAAATTTAACTCCGT 60.047 40.000 0.00 0.00 0.00 4.69
317 318 5.290400 CGACCTCCTAAAATTTAACTCCGTC 59.710 44.000 0.00 0.00 0.00 4.79
318 319 6.370186 ACCTCCTAAAATTTAACTCCGTCT 57.630 37.500 0.00 0.00 0.00 4.18
319 320 6.404708 ACCTCCTAAAATTTAACTCCGTCTC 58.595 40.000 0.00 0.00 0.00 3.36
320 321 6.212993 ACCTCCTAAAATTTAACTCCGTCTCT 59.787 38.462 0.00 0.00 0.00 3.10
321 322 6.757478 CCTCCTAAAATTTAACTCCGTCTCTC 59.243 42.308 0.00 0.00 0.00 3.20
322 323 7.235935 TCCTAAAATTTAACTCCGTCTCTCA 57.764 36.000 0.00 0.00 0.00 3.27
323 324 7.673180 TCCTAAAATTTAACTCCGTCTCTCAA 58.327 34.615 0.00 0.00 0.00 3.02
324 325 7.601508 TCCTAAAATTTAACTCCGTCTCTCAAC 59.398 37.037 0.00 0.00 0.00 3.18
325 326 6.555812 AAAATTTAACTCCGTCTCTCAACC 57.444 37.500 0.00 0.00 0.00 3.77
326 327 3.672767 TTTAACTCCGTCTCTCAACCC 57.327 47.619 0.00 0.00 0.00 4.11
327 328 2.297698 TAACTCCGTCTCTCAACCCA 57.702 50.000 0.00 0.00 0.00 4.51
328 329 1.645710 AACTCCGTCTCTCAACCCAT 58.354 50.000 0.00 0.00 0.00 4.00
329 330 0.898320 ACTCCGTCTCTCAACCCATG 59.102 55.000 0.00 0.00 0.00 3.66
330 331 1.186200 CTCCGTCTCTCAACCCATGA 58.814 55.000 0.00 0.00 36.38 3.07
343 344 5.684704 TCAACCCATGAGAAATATGAGTCC 58.315 41.667 0.00 0.00 33.04 3.85
344 345 4.342862 ACCCATGAGAAATATGAGTCCG 57.657 45.455 0.00 0.00 0.00 4.79
345 346 3.071602 ACCCATGAGAAATATGAGTCCGG 59.928 47.826 0.00 0.00 0.00 5.14
346 347 3.071602 CCCATGAGAAATATGAGTCCGGT 59.928 47.826 0.00 0.00 0.00 5.28
347 348 4.060900 CCATGAGAAATATGAGTCCGGTG 58.939 47.826 0.00 0.00 0.00 4.94
348 349 3.819564 TGAGAAATATGAGTCCGGTGG 57.180 47.619 0.00 0.00 0.00 4.61
349 350 3.371034 TGAGAAATATGAGTCCGGTGGA 58.629 45.455 0.00 0.00 0.00 4.02
350 351 3.967326 TGAGAAATATGAGTCCGGTGGAT 59.033 43.478 0.00 0.00 32.73 3.41
351 352 4.202253 TGAGAAATATGAGTCCGGTGGATG 60.202 45.833 0.00 0.00 32.73 3.51
352 353 2.550830 AATATGAGTCCGGTGGATGC 57.449 50.000 0.00 0.00 32.73 3.91
353 354 1.423584 ATATGAGTCCGGTGGATGCA 58.576 50.000 0.00 0.00 32.73 3.96
354 355 0.752658 TATGAGTCCGGTGGATGCAG 59.247 55.000 0.00 0.00 32.73 4.41
355 356 0.977627 ATGAGTCCGGTGGATGCAGA 60.978 55.000 0.00 0.00 32.73 4.26
356 357 1.142748 GAGTCCGGTGGATGCAGAG 59.857 63.158 0.00 0.00 32.73 3.35
357 358 2.187946 GTCCGGTGGATGCAGAGG 59.812 66.667 0.00 1.99 32.73 3.69
358 359 3.785859 TCCGGTGGATGCAGAGGC 61.786 66.667 0.00 0.00 41.68 4.70
359 360 3.790437 CCGGTGGATGCAGAGGCT 61.790 66.667 0.00 0.00 41.91 4.58
360 361 2.513204 CGGTGGATGCAGAGGCTG 60.513 66.667 0.00 0.00 41.91 4.85
369 370 2.433838 CAGAGGCTGCCGACAGTG 60.434 66.667 13.96 3.82 46.30 3.66
370 371 3.699894 AGAGGCTGCCGACAGTGG 61.700 66.667 13.96 0.00 46.30 4.00
371 372 4.767255 GAGGCTGCCGACAGTGGG 62.767 72.222 13.96 0.00 46.30 4.61
374 375 4.767255 GCTGCCGACAGTGGGAGG 62.767 72.222 5.63 0.00 46.68 4.30
377 378 3.075005 GCCGACAGTGGGAGGCTA 61.075 66.667 5.63 0.00 45.67 3.93
378 379 3.082579 GCCGACAGTGGGAGGCTAG 62.083 68.421 5.63 0.00 45.67 3.42
379 380 1.379977 CCGACAGTGGGAGGCTAGA 60.380 63.158 0.00 0.00 0.00 2.43
380 381 1.388065 CCGACAGTGGGAGGCTAGAG 61.388 65.000 0.00 0.00 0.00 2.43
381 382 0.394488 CGACAGTGGGAGGCTAGAGA 60.394 60.000 0.00 0.00 0.00 3.10
382 383 1.398692 GACAGTGGGAGGCTAGAGAG 58.601 60.000 0.00 0.00 0.00 3.20
383 384 0.032615 ACAGTGGGAGGCTAGAGAGG 60.033 60.000 0.00 0.00 0.00 3.69
384 385 0.260230 CAGTGGGAGGCTAGAGAGGA 59.740 60.000 0.00 0.00 0.00 3.71
385 386 0.555769 AGTGGGAGGCTAGAGAGGAG 59.444 60.000 0.00 0.00 0.00 3.69
386 387 1.112916 GTGGGAGGCTAGAGAGGAGC 61.113 65.000 0.00 0.00 39.33 4.70
387 388 1.901464 GGGAGGCTAGAGAGGAGCG 60.901 68.421 0.00 0.00 41.06 5.03
388 389 1.149627 GGAGGCTAGAGAGGAGCGA 59.850 63.158 0.00 0.00 41.06 4.93
389 390 0.889186 GGAGGCTAGAGAGGAGCGAG 60.889 65.000 0.00 0.00 41.06 5.03
390 391 0.107831 GAGGCTAGAGAGGAGCGAGA 59.892 60.000 0.00 0.00 41.06 4.04
391 392 0.179029 AGGCTAGAGAGGAGCGAGAC 60.179 60.000 0.00 0.00 41.06 3.36
392 393 1.170290 GGCTAGAGAGGAGCGAGACC 61.170 65.000 0.00 0.00 41.06 3.85
393 394 1.503818 GCTAGAGAGGAGCGAGACCG 61.504 65.000 0.00 0.00 39.16 4.79
394 395 0.882927 CTAGAGAGGAGCGAGACCGG 60.883 65.000 0.00 0.00 36.06 5.28
395 396 1.335882 TAGAGAGGAGCGAGACCGGA 61.336 60.000 9.46 0.00 36.06 5.14
396 397 2.124487 AGAGGAGCGAGACCGGAG 60.124 66.667 9.46 0.00 36.06 4.63
397 398 2.124653 GAGGAGCGAGACCGGAGA 60.125 66.667 9.46 0.00 36.06 3.71
398 399 2.438795 AGGAGCGAGACCGGAGAC 60.439 66.667 9.46 0.00 36.06 3.36
399 400 3.519930 GGAGCGAGACCGGAGACC 61.520 72.222 9.46 0.00 36.06 3.85
414 415 3.876341 GGAGACCGAGAGAGAGTAAAGA 58.124 50.000 0.00 0.00 0.00 2.52
415 416 3.875134 GGAGACCGAGAGAGAGTAAAGAG 59.125 52.174 0.00 0.00 0.00 2.85
416 417 3.875134 GAGACCGAGAGAGAGTAAAGAGG 59.125 52.174 0.00 0.00 0.00 3.69
417 418 3.520317 AGACCGAGAGAGAGTAAAGAGGA 59.480 47.826 0.00 0.00 0.00 3.71
418 419 4.019141 AGACCGAGAGAGAGTAAAGAGGAA 60.019 45.833 0.00 0.00 0.00 3.36
419 420 4.266714 ACCGAGAGAGAGTAAAGAGGAAG 58.733 47.826 0.00 0.00 0.00 3.46
420 421 4.019141 ACCGAGAGAGAGTAAAGAGGAAGA 60.019 45.833 0.00 0.00 0.00 2.87
421 422 4.334481 CCGAGAGAGAGTAAAGAGGAAGAC 59.666 50.000 0.00 0.00 0.00 3.01
422 423 4.938832 CGAGAGAGAGTAAAGAGGAAGACA 59.061 45.833 0.00 0.00 0.00 3.41
423 424 5.588648 CGAGAGAGAGTAAAGAGGAAGACAT 59.411 44.000 0.00 0.00 0.00 3.06
424 425 6.094881 CGAGAGAGAGTAAAGAGGAAGACATT 59.905 42.308 0.00 0.00 0.00 2.71
425 426 7.362574 CGAGAGAGAGTAAAGAGGAAGACATTT 60.363 40.741 0.00 0.00 0.00 2.32
426 427 8.201242 AGAGAGAGTAAAGAGGAAGACATTTT 57.799 34.615 0.00 0.00 0.00 1.82
427 428 9.315363 AGAGAGAGTAAAGAGGAAGACATTTTA 57.685 33.333 0.00 0.00 0.00 1.52
428 429 9.581099 GAGAGAGTAAAGAGGAAGACATTTTAG 57.419 37.037 0.00 0.00 0.00 1.85
429 430 8.536175 AGAGAGTAAAGAGGAAGACATTTTAGG 58.464 37.037 0.00 0.00 0.00 2.69
430 431 8.208575 AGAGTAAAGAGGAAGACATTTTAGGT 57.791 34.615 0.00 0.00 0.00 3.08
431 432 8.661345 AGAGTAAAGAGGAAGACATTTTAGGTT 58.339 33.333 0.00 0.00 0.00 3.50
432 433 9.286170 GAGTAAAGAGGAAGACATTTTAGGTTT 57.714 33.333 0.00 0.00 0.00 3.27
450 451 9.661563 TTTAGGTTTATATGTCTGTAAGTGGTG 57.338 33.333 0.00 0.00 33.76 4.17
451 452 7.253905 AGGTTTATATGTCTGTAAGTGGTGT 57.746 36.000 0.00 0.00 33.76 4.16
452 453 7.686434 AGGTTTATATGTCTGTAAGTGGTGTT 58.314 34.615 0.00 0.00 33.76 3.32
453 454 8.161425 AGGTTTATATGTCTGTAAGTGGTGTTT 58.839 33.333 0.00 0.00 33.76 2.83
454 455 8.234546 GGTTTATATGTCTGTAAGTGGTGTTTG 58.765 37.037 0.00 0.00 33.76 2.93
455 456 7.915293 TTATATGTCTGTAAGTGGTGTTTGG 57.085 36.000 0.00 0.00 33.76 3.28
456 457 2.925724 TGTCTGTAAGTGGTGTTTGGG 58.074 47.619 0.00 0.00 33.76 4.12
457 458 2.227194 GTCTGTAAGTGGTGTTTGGGG 58.773 52.381 0.00 0.00 33.76 4.96
458 459 1.847737 TCTGTAAGTGGTGTTTGGGGT 59.152 47.619 0.00 0.00 33.76 4.95
459 460 2.158726 TCTGTAAGTGGTGTTTGGGGTC 60.159 50.000 0.00 0.00 33.76 4.46
460 461 1.133730 TGTAAGTGGTGTTTGGGGTCC 60.134 52.381 0.00 0.00 0.00 4.46
461 462 1.133730 GTAAGTGGTGTTTGGGGTCCA 60.134 52.381 0.00 0.00 0.00 4.02
462 463 0.560688 AAGTGGTGTTTGGGGTCCAT 59.439 50.000 0.00 0.00 31.53 3.41
463 464 0.178964 AGTGGTGTTTGGGGTCCATG 60.179 55.000 0.00 0.00 31.53 3.66
464 465 0.469144 GTGGTGTTTGGGGTCCATGT 60.469 55.000 0.00 0.00 31.53 3.21
465 466 1.149986 TGGTGTTTGGGGTCCATGTA 58.850 50.000 0.00 0.00 31.53 2.29
466 467 1.713647 TGGTGTTTGGGGTCCATGTAT 59.286 47.619 0.00 0.00 31.53 2.29
467 468 2.920271 TGGTGTTTGGGGTCCATGTATA 59.080 45.455 0.00 0.00 31.53 1.47
473 474 5.191921 TGTTTGGGGTCCATGTATATGTACA 59.808 40.000 4.66 4.66 44.43 2.90
554 557 3.744660 ACTAAGAAGTCAAAGCAGGTGG 58.255 45.455 0.00 0.00 0.00 4.61
593 596 1.668101 GGTGCACGCTAGCTACTCCT 61.668 60.000 13.93 0.00 34.99 3.69
671 674 0.317160 CCCATCATCCATGCATGCAC 59.683 55.000 25.37 0.00 0.00 4.57
682 685 3.909662 CATGCACTGCACCTACCC 58.090 61.111 5.67 0.00 43.04 3.69
683 686 2.108514 CATGCACTGCACCTACCCG 61.109 63.158 5.67 0.00 43.04 5.28
685 688 4.394712 GCACTGCACCTACCCGCT 62.395 66.667 0.00 0.00 0.00 5.52
689 692 1.741770 CTGCACCTACCCGCTGTTC 60.742 63.158 0.00 0.00 0.00 3.18
690 693 2.436115 GCACCTACCCGCTGTTCC 60.436 66.667 0.00 0.00 0.00 3.62
697 700 0.974010 TACCCGCTGTTCCCTGTAGG 60.974 60.000 0.00 0.00 0.00 3.18
698 701 2.125106 CCGCTGTTCCCTGTAGGC 60.125 66.667 0.00 0.00 34.51 3.93
699 702 2.660064 CCGCTGTTCCCTGTAGGCT 61.660 63.158 0.00 0.00 34.51 4.58
701 704 0.103208 CGCTGTTCCCTGTAGGCTAG 59.897 60.000 0.00 0.00 34.51 3.42
702 705 0.179070 GCTGTTCCCTGTAGGCTAGC 60.179 60.000 6.04 6.04 34.51 3.42
703 706 1.490574 CTGTTCCCTGTAGGCTAGCT 58.509 55.000 15.72 3.22 34.51 3.32
704 707 1.137872 CTGTTCCCTGTAGGCTAGCTG 59.862 57.143 15.72 0.33 34.51 4.24
705 708 1.196012 GTTCCCTGTAGGCTAGCTGT 58.804 55.000 15.72 4.98 34.51 4.40
706 709 2.291996 TGTTCCCTGTAGGCTAGCTGTA 60.292 50.000 15.72 3.91 34.51 2.74
707 710 2.362717 GTTCCCTGTAGGCTAGCTGTAG 59.637 54.545 15.72 8.09 34.51 2.74
715 718 2.009888 GCTAGCTGTAGCCAAAGCG 58.990 57.895 7.70 0.00 45.37 4.68
784 790 2.211353 TTTTTGCGGGGAAGAAAACG 57.789 45.000 0.00 0.00 0.00 3.60
785 791 0.386113 TTTTGCGGGGAAGAAAACGG 59.614 50.000 0.00 0.00 0.00 4.44
786 792 2.077821 TTTGCGGGGAAGAAAACGGC 62.078 55.000 0.00 0.00 0.00 5.68
956 965 4.074627 TCCACGAAGATACAAACAACCA 57.925 40.909 0.00 0.00 0.00 3.67
964 973 1.095600 TACAAACAACCACGCAAGCA 58.904 45.000 0.00 0.00 45.62 3.91
975 984 4.645921 GCAAGCAACCACGGCCAC 62.646 66.667 2.24 0.00 0.00 5.01
992 1001 1.021390 CACCTTAGCTGCAACCCGAG 61.021 60.000 1.02 0.00 0.00 4.63
1068 1080 1.595093 GCGCCAGCCAAGGTAACAAT 61.595 55.000 0.00 0.00 36.63 2.71
1069 1081 0.887933 CGCCAGCCAAGGTAACAATT 59.112 50.000 0.00 0.00 41.41 2.32
1095 1107 2.806244 ACACGAAGCATGTTCTTGGTAC 59.194 45.455 14.40 0.00 34.07 3.34
1105 1120 4.913335 TGTTCTTGGTACGAGCTATAGG 57.087 45.455 1.04 0.00 0.00 2.57
1455 1477 3.562779 GACGCCGTTCGACTTCCCA 62.563 63.158 0.00 0.00 41.67 4.37
1467 1489 0.764369 ACTTCCCACTGGTCAGCTCA 60.764 55.000 0.00 0.00 0.00 4.26
1472 1494 1.750930 CACTGGTCAGCTCACAGGT 59.249 57.895 12.04 0.00 36.57 4.00
1473 1495 0.602106 CACTGGTCAGCTCACAGGTG 60.602 60.000 12.04 5.99 44.57 4.00
1714 1764 8.408743 AGCGTTTAGATCACTACTTTAATGAC 57.591 34.615 0.00 0.00 0.00 3.06
1792 1844 6.417191 TCGCAAATGAATTAACTACCTGAC 57.583 37.500 0.00 0.00 0.00 3.51
1800 1852 8.836268 ATGAATTAACTACCTGACGTTAAACA 57.164 30.769 0.00 0.00 38.59 2.83
1820 1872 5.957842 ACAACGAAAGAAATTGCCTATGA 57.042 34.783 0.00 0.00 0.00 2.15
1832 1884 5.864418 ATTGCCTATGAATCAGTTGCATT 57.136 34.783 4.60 0.02 0.00 3.56
1833 1885 4.906065 TGCCTATGAATCAGTTGCATTC 57.094 40.909 0.00 0.00 0.00 2.67
1835 1887 4.337274 TGCCTATGAATCAGTTGCATTCAG 59.663 41.667 5.94 0.00 42.23 3.02
1836 1888 4.792057 GCCTATGAATCAGTTGCATTCAGC 60.792 45.833 5.94 1.13 42.23 4.26
1899 1974 1.802636 CATAACGGCTTGCCACCAG 59.197 57.895 12.45 0.00 0.00 4.00
1968 2043 1.354705 CCATCATGATGCCATCTCCCT 59.645 52.381 27.24 0.00 37.49 4.20
1994 2069 1.228154 GCTCAACCGGTCAACCCTT 60.228 57.895 8.04 0.00 0.00 3.95
2016 2091 2.572733 CTCTCCTTCGCTGAGGACA 58.427 57.895 1.13 0.00 40.87 4.02
2020 2095 0.832135 TCCTTCGCTGAGGACACCTT 60.832 55.000 1.13 0.00 40.87 3.50
2059 2134 1.117994 ATCTCATGCTTGGAGCTCGA 58.882 50.000 7.83 0.00 42.97 4.04
2060 2135 1.117994 TCTCATGCTTGGAGCTCGAT 58.882 50.000 7.83 0.00 42.97 3.59
2061 2136 1.483827 TCTCATGCTTGGAGCTCGATT 59.516 47.619 7.83 0.00 42.97 3.34
2076 2151 3.834610 CTCGATTTCCAGTTGTCTACGT 58.165 45.455 0.00 0.00 0.00 3.57
2088 2163 4.049186 GTTGTCTACGTATGCACCTATGG 58.951 47.826 0.00 0.00 0.00 2.74
2120 2195 8.055279 TGGCTATAAAATCTGAAAGGTTTCAG 57.945 34.615 21.59 21.59 46.16 3.02
2124 2199 3.222603 AAATCTGAAAGGTTTCAGGCGT 58.777 40.909 25.23 13.37 46.16 5.68
2202 2277 4.522789 TGTCAAATCGATCTATCCGATCCA 59.477 41.667 0.00 0.00 44.85 3.41
2220 2295 5.337410 CGATCCAATCTCCTCTAGCATGAAT 60.337 44.000 0.00 0.00 0.00 2.57
2242 2317 9.897744 TGAATGAGATGTTGAGAACAAAATAAC 57.102 29.630 0.00 0.00 45.86 1.89
2281 2358 4.547367 ATAGCCAGCCGCCGTTCC 62.547 66.667 0.00 0.00 38.78 3.62
2285 2362 2.124901 CCAGCCGCCGTTCCATAA 60.125 61.111 0.00 0.00 0.00 1.90
2360 2467 6.645790 TGGCATTTTTGGTGCATTTTTATT 57.354 29.167 0.00 0.00 44.25 1.40
2385 2492 6.488683 TCAAAAATGGTTACCGTCAGATCTTT 59.511 34.615 0.00 0.00 0.00 2.52
2425 2532 1.423794 TTCGCTGGGGTTTTCCTCCT 61.424 55.000 0.00 0.00 40.45 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.509442 TGGGTGCTTCATCTGGATTTTT 58.491 40.909 0.00 0.00 0.00 1.94
10 11 2.309755 TCTGGGTGCTTCATCTGGATTT 59.690 45.455 0.00 0.00 0.00 2.17
11 12 1.918262 TCTGGGTGCTTCATCTGGATT 59.082 47.619 0.00 0.00 0.00 3.01
12 13 1.489649 CTCTGGGTGCTTCATCTGGAT 59.510 52.381 0.00 0.00 0.00 3.41
13 14 0.907486 CTCTGGGTGCTTCATCTGGA 59.093 55.000 0.00 0.00 0.00 3.86
14 15 0.747283 GCTCTGGGTGCTTCATCTGG 60.747 60.000 0.00 0.00 0.00 3.86
15 16 1.088340 CGCTCTGGGTGCTTCATCTG 61.088 60.000 0.00 0.00 0.00 2.90
16 17 1.220206 CGCTCTGGGTGCTTCATCT 59.780 57.895 0.00 0.00 0.00 2.90
17 18 2.467826 GCGCTCTGGGTGCTTCATC 61.468 63.158 5.68 0.00 46.82 2.92
18 19 2.437359 GCGCTCTGGGTGCTTCAT 60.437 61.111 5.68 0.00 46.82 2.57
24 25 3.939837 ATGTGTCGCGCTCTGGGTG 62.940 63.158 5.56 0.00 0.00 4.61
25 26 3.695606 ATGTGTCGCGCTCTGGGT 61.696 61.111 5.56 0.00 0.00 4.51
26 27 3.190849 CATGTGTCGCGCTCTGGG 61.191 66.667 5.56 0.00 0.00 4.45
27 28 3.190849 CCATGTGTCGCGCTCTGG 61.191 66.667 5.56 0.00 0.00 3.86
28 29 3.857854 GCCATGTGTCGCGCTCTG 61.858 66.667 5.56 0.00 0.00 3.35
51 52 3.127533 ATTTGGCGCGCTCTCACC 61.128 61.111 32.29 13.79 0.00 4.02
52 53 2.099062 CATTTGGCGCGCTCTCAC 59.901 61.111 32.29 14.61 0.00 3.51
53 54 3.126879 CCATTTGGCGCGCTCTCA 61.127 61.111 32.29 18.24 0.00 3.27
63 64 2.760159 AACGATCGGCGCCATTTGG 61.760 57.895 28.98 13.69 46.04 3.28
64 65 1.583451 CAACGATCGGCGCCATTTG 60.583 57.895 28.98 18.63 46.04 2.32
65 66 2.760159 CCAACGATCGGCGCCATTT 61.760 57.895 28.98 10.24 46.04 2.32
66 67 3.202001 CCAACGATCGGCGCCATT 61.202 61.111 28.98 13.31 46.04 3.16
72 73 4.162690 AGCCTCCCAACGATCGGC 62.163 66.667 20.98 11.03 40.99 5.54
73 74 2.107141 GAGCCTCCCAACGATCGG 59.893 66.667 20.98 1.81 0.00 4.18
74 75 2.107141 GGAGCCTCCCAACGATCG 59.893 66.667 14.88 14.88 0.00 3.69
75 76 2.107141 CGGAGCCTCCCAACGATC 59.893 66.667 4.85 0.00 31.13 3.69
76 77 3.470888 CCGGAGCCTCCCAACGAT 61.471 66.667 4.85 0.00 31.13 3.73
77 78 4.689549 TCCGGAGCCTCCCAACGA 62.690 66.667 4.85 0.00 31.13 3.85
78 79 3.665675 CTTCCGGAGCCTCCCAACG 62.666 68.421 3.34 0.00 31.13 4.10
79 80 2.269241 CTTCCGGAGCCTCCCAAC 59.731 66.667 3.34 0.00 31.13 3.77
80 81 3.009115 CCTTCCGGAGCCTCCCAA 61.009 66.667 3.34 0.00 31.13 4.12
81 82 4.332543 ACCTTCCGGAGCCTCCCA 62.333 66.667 3.34 0.00 31.13 4.37
82 83 3.787001 CACCTTCCGGAGCCTCCC 61.787 72.222 3.34 0.00 31.13 4.30
83 84 4.475135 GCACCTTCCGGAGCCTCC 62.475 72.222 3.34 0.00 40.55 4.30
84 85 3.706373 TGCACCTTCCGGAGCCTC 61.706 66.667 3.34 0.00 45.11 4.70
85 86 4.021925 GTGCACCTTCCGGAGCCT 62.022 66.667 5.22 0.00 45.11 4.58
86 87 3.959991 GAGTGCACCTTCCGGAGCC 62.960 68.421 14.63 0.00 45.11 4.70
87 88 2.435059 GAGTGCACCTTCCGGAGC 60.435 66.667 14.63 5.18 45.80 4.70
88 89 2.125912 CGAGTGCACCTTCCGGAG 60.126 66.667 14.63 0.00 0.00 4.63
89 90 2.915659 ACGAGTGCACCTTCCGGA 60.916 61.111 14.63 0.00 0.00 5.14
90 91 1.592400 TAGACGAGTGCACCTTCCGG 61.592 60.000 14.63 0.00 0.00 5.14
91 92 0.456312 GTAGACGAGTGCACCTTCCG 60.456 60.000 14.63 14.37 0.00 4.30
92 93 0.889306 AGTAGACGAGTGCACCTTCC 59.111 55.000 14.63 0.69 0.00 3.46
93 94 2.748532 ACTAGTAGACGAGTGCACCTTC 59.251 50.000 14.63 7.55 30.59 3.46
94 95 2.792878 ACTAGTAGACGAGTGCACCTT 58.207 47.619 14.63 0.00 30.59 3.50
95 96 2.488545 CAACTAGTAGACGAGTGCACCT 59.511 50.000 14.63 5.86 32.16 4.00
96 97 2.864968 CAACTAGTAGACGAGTGCACC 58.135 52.381 14.63 4.10 32.16 5.01
97 98 2.095161 AGCAACTAGTAGACGAGTGCAC 60.095 50.000 9.40 9.40 32.16 4.57
98 99 2.160205 AGCAACTAGTAGACGAGTGCA 58.840 47.619 14.16 0.00 32.16 4.57
99 100 2.478200 GGAGCAACTAGTAGACGAGTGC 60.478 54.545 3.59 0.00 32.16 4.40
100 101 2.097791 GGGAGCAACTAGTAGACGAGTG 59.902 54.545 3.59 0.00 32.16 3.51
101 102 2.367486 GGGAGCAACTAGTAGACGAGT 58.633 52.381 3.59 0.00 33.17 4.18
102 103 1.331138 CGGGAGCAACTAGTAGACGAG 59.669 57.143 3.59 0.00 0.00 4.18
103 104 1.065926 TCGGGAGCAACTAGTAGACGA 60.066 52.381 3.59 0.00 0.00 4.20
104 105 1.063764 GTCGGGAGCAACTAGTAGACG 59.936 57.143 3.59 0.00 0.00 4.18
105 106 1.404748 GGTCGGGAGCAACTAGTAGAC 59.595 57.143 3.59 0.00 0.00 2.59
106 107 1.005097 TGGTCGGGAGCAACTAGTAGA 59.995 52.381 3.59 0.00 35.69 2.59
107 108 1.471119 TGGTCGGGAGCAACTAGTAG 58.529 55.000 0.00 0.00 35.69 2.57
108 109 2.154567 ATGGTCGGGAGCAACTAGTA 57.845 50.000 4.53 0.00 42.53 1.82
109 110 2.154567 TATGGTCGGGAGCAACTAGT 57.845 50.000 4.53 0.00 42.53 2.57
110 111 3.393800 CAATATGGTCGGGAGCAACTAG 58.606 50.000 4.53 0.00 42.53 2.57
111 112 2.104111 CCAATATGGTCGGGAGCAACTA 59.896 50.000 4.53 0.00 42.53 2.24
112 113 1.134098 CCAATATGGTCGGGAGCAACT 60.134 52.381 4.53 0.00 42.53 3.16
113 114 1.134220 TCCAATATGGTCGGGAGCAAC 60.134 52.381 4.53 0.00 42.53 4.17
114 115 1.134220 GTCCAATATGGTCGGGAGCAA 60.134 52.381 4.53 0.00 42.53 3.91
115 116 0.468226 GTCCAATATGGTCGGGAGCA 59.532 55.000 2.75 2.75 43.48 4.26
116 117 0.600255 CGTCCAATATGGTCGGGAGC 60.600 60.000 7.93 0.00 43.52 4.70
117 118 1.037493 TCGTCCAATATGGTCGGGAG 58.963 55.000 14.28 0.00 46.36 4.30
118 119 0.748450 GTCGTCCAATATGGTCGGGA 59.252 55.000 14.28 0.00 46.36 5.14
119 120 0.596600 CGTCGTCCAATATGGTCGGG 60.597 60.000 14.28 5.31 46.36 5.14
120 121 0.382873 TCGTCGTCCAATATGGTCGG 59.617 55.000 14.28 2.16 46.36 4.79
122 123 1.537562 GGGTCGTCGTCCAATATGGTC 60.538 57.143 10.68 0.00 39.03 4.02
123 124 0.462789 GGGTCGTCGTCCAATATGGT 59.537 55.000 10.68 0.00 39.03 3.55
124 125 0.462375 TGGGTCGTCGTCCAATATGG 59.538 55.000 10.68 0.00 39.43 2.74
125 126 2.526304 ATGGGTCGTCGTCCAATATG 57.474 50.000 10.68 0.00 36.54 1.78
126 127 2.698797 AGAATGGGTCGTCGTCCAATAT 59.301 45.455 10.68 0.00 36.54 1.28
127 128 2.104967 AGAATGGGTCGTCGTCCAATA 58.895 47.619 10.68 0.00 36.54 1.90
128 129 0.902531 AGAATGGGTCGTCGTCCAAT 59.097 50.000 10.68 1.55 36.54 3.16
129 130 0.682852 AAGAATGGGTCGTCGTCCAA 59.317 50.000 10.68 0.00 36.54 3.53
130 131 1.548081 TAAGAATGGGTCGTCGTCCA 58.452 50.000 10.68 10.99 37.46 4.02
131 132 2.361438 AGATAAGAATGGGTCGTCGTCC 59.639 50.000 0.00 0.00 0.00 4.79
132 133 3.315749 AGAGATAAGAATGGGTCGTCGTC 59.684 47.826 0.00 0.00 0.00 4.20
133 134 3.066900 CAGAGATAAGAATGGGTCGTCGT 59.933 47.826 0.00 0.00 0.00 4.34
134 135 3.315470 TCAGAGATAAGAATGGGTCGTCG 59.685 47.826 0.00 0.00 0.00 5.12
135 136 4.920640 TCAGAGATAAGAATGGGTCGTC 57.079 45.455 0.00 0.00 0.00 4.20
136 137 5.677319 TTTCAGAGATAAGAATGGGTCGT 57.323 39.130 0.00 0.00 0.00 4.34
137 138 6.512415 GCAATTTCAGAGATAAGAATGGGTCG 60.512 42.308 0.00 0.00 0.00 4.79
138 139 6.545298 AGCAATTTCAGAGATAAGAATGGGTC 59.455 38.462 0.00 0.00 0.00 4.46
139 140 6.430007 AGCAATTTCAGAGATAAGAATGGGT 58.570 36.000 0.00 0.00 0.00 4.51
140 141 6.771749 AGAGCAATTTCAGAGATAAGAATGGG 59.228 38.462 0.00 0.00 0.00 4.00
141 142 7.804843 AGAGCAATTTCAGAGATAAGAATGG 57.195 36.000 0.00 0.00 0.00 3.16
144 145 9.593134 GTCTAAGAGCAATTTCAGAGATAAGAA 57.407 33.333 0.00 0.00 0.00 2.52
145 146 8.976353 AGTCTAAGAGCAATTTCAGAGATAAGA 58.024 33.333 0.00 0.00 0.00 2.10
146 147 9.598517 AAGTCTAAGAGCAATTTCAGAGATAAG 57.401 33.333 0.00 0.00 0.00 1.73
147 148 9.950496 AAAGTCTAAGAGCAATTTCAGAGATAA 57.050 29.630 0.00 0.00 0.00 1.75
148 149 9.376075 CAAAGTCTAAGAGCAATTTCAGAGATA 57.624 33.333 0.00 0.00 0.00 1.98
149 150 7.148272 GCAAAGTCTAAGAGCAATTTCAGAGAT 60.148 37.037 0.00 0.00 0.00 2.75
150 151 6.148480 GCAAAGTCTAAGAGCAATTTCAGAGA 59.852 38.462 0.00 0.00 0.00 3.10
151 152 6.313252 GCAAAGTCTAAGAGCAATTTCAGAG 58.687 40.000 0.00 0.00 0.00 3.35
152 153 5.182001 GGCAAAGTCTAAGAGCAATTTCAGA 59.818 40.000 0.00 0.00 0.00 3.27
153 154 5.048504 TGGCAAAGTCTAAGAGCAATTTCAG 60.049 40.000 0.00 0.00 0.00 3.02
154 155 4.826733 TGGCAAAGTCTAAGAGCAATTTCA 59.173 37.500 0.00 0.00 0.00 2.69
155 156 5.048434 AGTGGCAAAGTCTAAGAGCAATTTC 60.048 40.000 0.00 0.00 0.00 2.17
156 157 4.829492 AGTGGCAAAGTCTAAGAGCAATTT 59.171 37.500 0.00 0.00 0.00 1.82
157 158 4.401925 AGTGGCAAAGTCTAAGAGCAATT 58.598 39.130 0.00 0.00 0.00 2.32
158 159 4.026356 AGTGGCAAAGTCTAAGAGCAAT 57.974 40.909 0.00 0.00 0.00 3.56
159 160 3.492102 AGTGGCAAAGTCTAAGAGCAA 57.508 42.857 0.00 0.00 0.00 3.91
160 161 3.578716 ACTAGTGGCAAAGTCTAAGAGCA 59.421 43.478 0.00 0.00 0.00 4.26
161 162 4.195225 ACTAGTGGCAAAGTCTAAGAGC 57.805 45.455 0.00 0.00 0.00 4.09
162 163 5.409826 CCAAACTAGTGGCAAAGTCTAAGAG 59.590 44.000 0.00 0.00 0.00 2.85
163 164 5.305585 CCAAACTAGTGGCAAAGTCTAAGA 58.694 41.667 0.00 0.00 0.00 2.10
164 165 5.613358 CCAAACTAGTGGCAAAGTCTAAG 57.387 43.478 0.00 0.00 0.00 2.18
175 176 3.426615 TGTTAATGGGCCAAACTAGTGG 58.573 45.455 11.89 0.00 42.05 4.00
176 177 4.279671 TGTTGTTAATGGGCCAAACTAGTG 59.720 41.667 11.89 0.00 0.00 2.74
177 178 4.279922 GTGTTGTTAATGGGCCAAACTAGT 59.720 41.667 11.89 0.00 0.00 2.57
178 179 4.279671 TGTGTTGTTAATGGGCCAAACTAG 59.720 41.667 11.89 0.00 0.00 2.57
179 180 4.215908 TGTGTTGTTAATGGGCCAAACTA 58.784 39.130 11.89 5.65 0.00 2.24
180 181 3.034635 TGTGTTGTTAATGGGCCAAACT 58.965 40.909 11.89 0.00 0.00 2.66
181 182 3.460857 TGTGTTGTTAATGGGCCAAAC 57.539 42.857 11.89 12.65 0.00 2.93
182 183 3.244353 CCATGTGTTGTTAATGGGCCAAA 60.244 43.478 11.89 0.00 37.74 3.28
183 184 2.301296 CCATGTGTTGTTAATGGGCCAA 59.699 45.455 11.89 0.00 37.74 4.52
184 185 1.898472 CCATGTGTTGTTAATGGGCCA 59.102 47.619 9.61 9.61 37.74 5.36
185 186 1.405391 GCCATGTGTTGTTAATGGGCC 60.405 52.381 0.00 0.00 41.06 5.80
186 187 2.008752 GCCATGTGTTGTTAATGGGC 57.991 50.000 3.29 0.00 41.06 5.36
187 188 2.178580 AGGCCATGTGTTGTTAATGGG 58.821 47.619 5.01 0.00 41.06 4.00
188 189 4.704540 TCTTAGGCCATGTGTTGTTAATGG 59.295 41.667 5.01 0.00 43.18 3.16
189 190 5.895636 TCTTAGGCCATGTGTTGTTAATG 57.104 39.130 5.01 0.00 0.00 1.90
190 191 6.245408 TCTTCTTAGGCCATGTGTTGTTAAT 58.755 36.000 5.01 0.00 0.00 1.40
191 192 5.626142 TCTTCTTAGGCCATGTGTTGTTAA 58.374 37.500 5.01 0.00 0.00 2.01
192 193 5.235850 TCTTCTTAGGCCATGTGTTGTTA 57.764 39.130 5.01 0.00 0.00 2.41
193 194 4.098914 TCTTCTTAGGCCATGTGTTGTT 57.901 40.909 5.01 0.00 0.00 2.83
194 195 3.788227 TCTTCTTAGGCCATGTGTTGT 57.212 42.857 5.01 0.00 0.00 3.32
195 196 4.074970 ACTTCTTCTTAGGCCATGTGTTG 58.925 43.478 5.01 0.00 0.00 3.33
196 197 4.042187 AGACTTCTTCTTAGGCCATGTGTT 59.958 41.667 5.01 0.00 0.00 3.32
197 198 3.584848 AGACTTCTTCTTAGGCCATGTGT 59.415 43.478 5.01 0.00 0.00 3.72
198 199 4.213564 AGACTTCTTCTTAGGCCATGTG 57.786 45.455 5.01 0.00 0.00 3.21
199 200 6.352516 CAATAGACTTCTTCTTAGGCCATGT 58.647 40.000 5.01 0.00 35.55 3.21
200 201 5.762218 CCAATAGACTTCTTCTTAGGCCATG 59.238 44.000 5.01 0.00 35.55 3.66
201 202 5.688766 GCCAATAGACTTCTTCTTAGGCCAT 60.689 44.000 5.01 0.00 37.91 4.40
202 203 4.384208 GCCAATAGACTTCTTCTTAGGCCA 60.384 45.833 5.01 0.00 37.91 5.36
203 204 4.130857 GCCAATAGACTTCTTCTTAGGCC 58.869 47.826 0.00 0.00 37.91 5.19
204 205 4.130857 GGCCAATAGACTTCTTCTTAGGC 58.869 47.826 0.00 0.00 40.75 3.93
205 206 4.709250 GGGCCAATAGACTTCTTCTTAGG 58.291 47.826 4.39 0.00 35.55 2.69
206 207 4.141914 ACGGGCCAATAGACTTCTTCTTAG 60.142 45.833 4.39 0.00 35.55 2.18
207 208 3.773119 ACGGGCCAATAGACTTCTTCTTA 59.227 43.478 4.39 0.00 35.55 2.10
208 209 2.572104 ACGGGCCAATAGACTTCTTCTT 59.428 45.455 4.39 0.00 35.55 2.52
209 210 2.093447 CACGGGCCAATAGACTTCTTCT 60.093 50.000 4.39 0.00 38.51 2.85
210 211 2.280628 CACGGGCCAATAGACTTCTTC 58.719 52.381 4.39 0.00 0.00 2.87
211 212 1.679032 GCACGGGCCAATAGACTTCTT 60.679 52.381 4.39 0.00 0.00 2.52
212 213 0.107654 GCACGGGCCAATAGACTTCT 60.108 55.000 4.39 0.00 0.00 2.85
213 214 0.107654 AGCACGGGCCAATAGACTTC 60.108 55.000 5.73 0.00 42.56 3.01
214 215 0.328258 AAGCACGGGCCAATAGACTT 59.672 50.000 5.73 0.00 42.56 3.01
215 216 0.107654 GAAGCACGGGCCAATAGACT 60.108 55.000 5.73 0.00 42.56 3.24
216 217 1.429148 CGAAGCACGGGCCAATAGAC 61.429 60.000 5.73 0.00 42.56 2.59
217 218 1.153449 CGAAGCACGGGCCAATAGA 60.153 57.895 5.73 0.00 42.56 1.98
218 219 3.409856 CGAAGCACGGGCCAATAG 58.590 61.111 5.73 0.00 42.56 1.73
231 232 3.042887 GGCAGTGTTAAACAAAGCGAAG 58.957 45.455 0.00 0.00 32.86 3.79
232 233 2.423892 TGGCAGTGTTAAACAAAGCGAA 59.576 40.909 0.00 0.00 32.86 4.70
233 234 2.017782 TGGCAGTGTTAAACAAAGCGA 58.982 42.857 0.00 0.00 32.86 4.93
234 235 2.116366 GTGGCAGTGTTAAACAAAGCG 58.884 47.619 0.00 0.00 32.86 4.68
235 236 3.115554 CAGTGGCAGTGTTAAACAAAGC 58.884 45.455 14.25 0.00 31.76 3.51
236 237 3.115554 GCAGTGGCAGTGTTAAACAAAG 58.884 45.455 22.50 0.00 40.72 2.77
237 238 2.478709 CGCAGTGGCAGTGTTAAACAAA 60.479 45.455 22.50 0.00 41.24 2.83
238 239 1.064803 CGCAGTGGCAGTGTTAAACAA 59.935 47.619 22.50 0.00 41.24 2.83
239 240 0.660488 CGCAGTGGCAGTGTTAAACA 59.340 50.000 22.50 0.00 41.24 2.83
240 241 0.661020 ACGCAGTGGCAGTGTTAAAC 59.339 50.000 22.50 5.59 42.51 2.01
241 242 3.088259 ACGCAGTGGCAGTGTTAAA 57.912 47.368 22.50 0.00 42.51 1.52
242 243 4.868026 ACGCAGTGGCAGTGTTAA 57.132 50.000 22.50 0.00 42.51 2.01
254 255 2.202851 CCTAGCAGCTCCACGCAG 60.203 66.667 0.00 0.00 42.61 5.18
255 256 2.997315 ACCTAGCAGCTCCACGCA 60.997 61.111 0.00 0.00 42.61 5.24
256 257 2.510238 CACCTAGCAGCTCCACGC 60.510 66.667 0.00 0.00 39.57 5.34
257 258 1.320344 TACCACCTAGCAGCTCCACG 61.320 60.000 0.00 0.00 0.00 4.94
258 259 1.123928 ATACCACCTAGCAGCTCCAC 58.876 55.000 0.00 0.00 0.00 4.02
259 260 1.123077 CATACCACCTAGCAGCTCCA 58.877 55.000 0.00 0.00 0.00 3.86
260 261 1.123928 ACATACCACCTAGCAGCTCC 58.876 55.000 0.00 0.00 0.00 4.70
261 262 2.990066 AACATACCACCTAGCAGCTC 57.010 50.000 0.00 0.00 0.00 4.09
262 263 3.347216 CAAAACATACCACCTAGCAGCT 58.653 45.455 0.00 0.00 0.00 4.24
263 264 2.423538 CCAAAACATACCACCTAGCAGC 59.576 50.000 0.00 0.00 0.00 5.25
264 265 3.686016 ACCAAAACATACCACCTAGCAG 58.314 45.455 0.00 0.00 0.00 4.24
265 266 3.799432 ACCAAAACATACCACCTAGCA 57.201 42.857 0.00 0.00 0.00 3.49
266 267 3.824443 ACAACCAAAACATACCACCTAGC 59.176 43.478 0.00 0.00 0.00 3.42
267 268 5.067273 TCACAACCAAAACATACCACCTAG 58.933 41.667 0.00 0.00 0.00 3.02
268 269 5.050126 TCACAACCAAAACATACCACCTA 57.950 39.130 0.00 0.00 0.00 3.08
269 270 3.904717 TCACAACCAAAACATACCACCT 58.095 40.909 0.00 0.00 0.00 4.00
270 271 4.864704 ATCACAACCAAAACATACCACC 57.135 40.909 0.00 0.00 0.00 4.61
271 272 4.915085 CGAATCACAACCAAAACATACCAC 59.085 41.667 0.00 0.00 0.00 4.16
272 273 4.822350 TCGAATCACAACCAAAACATACCA 59.178 37.500 0.00 0.00 0.00 3.25
273 274 5.151389 GTCGAATCACAACCAAAACATACC 58.849 41.667 0.00 0.00 0.00 2.73
274 275 5.048991 AGGTCGAATCACAACCAAAACATAC 60.049 40.000 0.00 0.00 35.43 2.39
275 276 5.067273 AGGTCGAATCACAACCAAAACATA 58.933 37.500 0.00 0.00 35.43 2.29
276 277 3.888930 AGGTCGAATCACAACCAAAACAT 59.111 39.130 0.00 0.00 35.43 2.71
277 278 3.283751 AGGTCGAATCACAACCAAAACA 58.716 40.909 0.00 0.00 35.43 2.83
278 279 3.304458 GGAGGTCGAATCACAACCAAAAC 60.304 47.826 0.00 0.00 35.43 2.43
279 280 2.882137 GGAGGTCGAATCACAACCAAAA 59.118 45.455 0.00 0.00 35.43 2.44
280 281 2.105821 AGGAGGTCGAATCACAACCAAA 59.894 45.455 0.00 0.00 35.43 3.28
281 282 1.697432 AGGAGGTCGAATCACAACCAA 59.303 47.619 0.00 0.00 35.43 3.67
282 283 1.348064 AGGAGGTCGAATCACAACCA 58.652 50.000 0.00 0.00 35.43 3.67
283 284 3.604875 TTAGGAGGTCGAATCACAACC 57.395 47.619 0.00 0.00 0.00 3.77
284 285 6.496338 AATTTTAGGAGGTCGAATCACAAC 57.504 37.500 0.00 0.00 0.00 3.32
285 286 8.508875 GTTAAATTTTAGGAGGTCGAATCACAA 58.491 33.333 0.00 0.00 0.00 3.33
286 287 7.881232 AGTTAAATTTTAGGAGGTCGAATCACA 59.119 33.333 0.00 0.00 0.00 3.58
287 288 8.265165 AGTTAAATTTTAGGAGGTCGAATCAC 57.735 34.615 0.00 0.00 0.00 3.06
288 289 7.551617 GGAGTTAAATTTTAGGAGGTCGAATCA 59.448 37.037 0.00 0.00 0.00 2.57
289 290 7.254353 CGGAGTTAAATTTTAGGAGGTCGAATC 60.254 40.741 0.00 0.00 0.00 2.52
290 291 6.537660 CGGAGTTAAATTTTAGGAGGTCGAAT 59.462 38.462 0.00 0.00 0.00 3.34
291 292 5.870978 CGGAGTTAAATTTTAGGAGGTCGAA 59.129 40.000 0.00 0.00 0.00 3.71
292 293 5.047092 ACGGAGTTAAATTTTAGGAGGTCGA 60.047 40.000 0.00 0.00 37.78 4.20
293 294 5.173664 ACGGAGTTAAATTTTAGGAGGTCG 58.826 41.667 0.00 0.00 37.78 4.79
311 312 1.186200 TCATGGGTTGAGAGACGGAG 58.814 55.000 0.00 0.00 0.00 4.63
312 313 3.374318 TCATGGGTTGAGAGACGGA 57.626 52.632 0.00 0.00 0.00 4.69
320 321 5.684704 GGACTCATATTTCTCATGGGTTGA 58.315 41.667 0.00 0.00 37.23 3.18
321 322 4.512944 CGGACTCATATTTCTCATGGGTTG 59.487 45.833 0.00 0.00 37.23 3.77
322 323 4.444876 CCGGACTCATATTTCTCATGGGTT 60.445 45.833 0.00 0.00 37.23 4.11
323 324 3.071602 CCGGACTCATATTTCTCATGGGT 59.928 47.826 0.00 0.00 39.84 4.51
324 325 3.071602 ACCGGACTCATATTTCTCATGGG 59.928 47.826 9.46 0.00 0.00 4.00
325 326 4.060900 CACCGGACTCATATTTCTCATGG 58.939 47.826 9.46 0.00 0.00 3.66
326 327 4.060900 CCACCGGACTCATATTTCTCATG 58.939 47.826 9.46 0.00 0.00 3.07
327 328 3.967326 TCCACCGGACTCATATTTCTCAT 59.033 43.478 9.46 0.00 0.00 2.90
328 329 3.371034 TCCACCGGACTCATATTTCTCA 58.629 45.455 9.46 0.00 0.00 3.27
329 330 4.310769 CATCCACCGGACTCATATTTCTC 58.689 47.826 9.46 0.00 32.98 2.87
330 331 3.495100 GCATCCACCGGACTCATATTTCT 60.495 47.826 9.46 0.00 32.98 2.52
331 332 2.808543 GCATCCACCGGACTCATATTTC 59.191 50.000 9.46 0.00 32.98 2.17
332 333 2.172505 TGCATCCACCGGACTCATATTT 59.827 45.455 9.46 0.00 32.98 1.40
333 334 1.768275 TGCATCCACCGGACTCATATT 59.232 47.619 9.46 0.00 32.98 1.28
334 335 1.345741 CTGCATCCACCGGACTCATAT 59.654 52.381 9.46 0.00 32.98 1.78
335 336 0.752658 CTGCATCCACCGGACTCATA 59.247 55.000 9.46 0.00 32.98 2.15
336 337 0.977627 TCTGCATCCACCGGACTCAT 60.978 55.000 9.46 0.00 32.98 2.90
337 338 1.607801 CTCTGCATCCACCGGACTCA 61.608 60.000 9.46 0.00 32.98 3.41
338 339 1.142748 CTCTGCATCCACCGGACTC 59.857 63.158 9.46 0.00 32.98 3.36
339 340 2.362369 CCTCTGCATCCACCGGACT 61.362 63.158 9.46 0.00 32.98 3.85
340 341 2.187946 CCTCTGCATCCACCGGAC 59.812 66.667 9.46 0.00 32.98 4.79
341 342 3.785859 GCCTCTGCATCCACCGGA 61.786 66.667 9.46 0.00 37.47 5.14
342 343 3.790437 AGCCTCTGCATCCACCGG 61.790 66.667 0.00 0.00 41.13 5.28
343 344 2.513204 CAGCCTCTGCATCCACCG 60.513 66.667 0.00 0.00 41.13 4.94
352 353 2.433838 CACTGTCGGCAGCCTCTG 60.434 66.667 18.84 3.62 46.30 3.35
353 354 3.699894 CCACTGTCGGCAGCCTCT 61.700 66.667 18.84 0.00 46.30 3.69
354 355 4.767255 CCCACTGTCGGCAGCCTC 62.767 72.222 18.84 3.07 46.30 4.70
356 357 4.767255 CTCCCACTGTCGGCAGCC 62.767 72.222 18.84 0.00 46.30 4.85
357 358 4.767255 CCTCCCACTGTCGGCAGC 62.767 72.222 18.84 0.00 46.30 5.25
359 360 3.897681 TAGCCTCCCACTGTCGGCA 62.898 63.158 0.00 0.00 44.85 5.69
360 361 3.075005 TAGCCTCCCACTGTCGGC 61.075 66.667 0.00 0.00 42.79 5.54
361 362 1.379977 TCTAGCCTCCCACTGTCGG 60.380 63.158 0.00 0.00 0.00 4.79
362 363 0.394488 TCTCTAGCCTCCCACTGTCG 60.394 60.000 0.00 0.00 0.00 4.35
363 364 1.398692 CTCTCTAGCCTCCCACTGTC 58.601 60.000 0.00 0.00 0.00 3.51
364 365 0.032615 CCTCTCTAGCCTCCCACTGT 60.033 60.000 0.00 0.00 0.00 3.55
365 366 0.260230 TCCTCTCTAGCCTCCCACTG 59.740 60.000 0.00 0.00 0.00 3.66
366 367 0.555769 CTCCTCTCTAGCCTCCCACT 59.444 60.000 0.00 0.00 0.00 4.00
367 368 1.112916 GCTCCTCTCTAGCCTCCCAC 61.113 65.000 0.00 0.00 33.73 4.61
368 369 1.231641 GCTCCTCTCTAGCCTCCCA 59.768 63.158 0.00 0.00 33.73 4.37
369 370 1.901464 CGCTCCTCTCTAGCCTCCC 60.901 68.421 0.00 0.00 36.60 4.30
370 371 0.889186 CTCGCTCCTCTCTAGCCTCC 60.889 65.000 0.00 0.00 36.60 4.30
371 372 0.107831 TCTCGCTCCTCTCTAGCCTC 59.892 60.000 0.00 0.00 36.60 4.70
372 373 0.179029 GTCTCGCTCCTCTCTAGCCT 60.179 60.000 0.00 0.00 36.60 4.58
373 374 1.170290 GGTCTCGCTCCTCTCTAGCC 61.170 65.000 0.00 0.00 36.60 3.93
374 375 1.503818 CGGTCTCGCTCCTCTCTAGC 61.504 65.000 0.00 0.00 36.60 3.42
375 376 0.882927 CCGGTCTCGCTCCTCTCTAG 60.883 65.000 0.00 0.00 34.56 2.43
376 377 1.146485 CCGGTCTCGCTCCTCTCTA 59.854 63.158 0.00 0.00 34.56 2.43
377 378 2.124487 CCGGTCTCGCTCCTCTCT 60.124 66.667 0.00 0.00 34.56 3.10
378 379 2.124653 TCCGGTCTCGCTCCTCTC 60.125 66.667 0.00 0.00 34.56 3.20
379 380 2.124487 CTCCGGTCTCGCTCCTCT 60.124 66.667 0.00 0.00 34.56 3.69
380 381 2.124653 TCTCCGGTCTCGCTCCTC 60.125 66.667 0.00 0.00 34.56 3.71
381 382 2.438795 GTCTCCGGTCTCGCTCCT 60.439 66.667 0.00 0.00 34.56 3.69
382 383 3.519930 GGTCTCCGGTCTCGCTCC 61.520 72.222 0.00 0.00 34.56 4.70
383 384 3.878519 CGGTCTCCGGTCTCGCTC 61.879 72.222 0.00 0.00 44.15 5.03
393 394 3.875134 CTCTTTACTCTCTCTCGGTCTCC 59.125 52.174 0.00 0.00 0.00 3.71
394 395 3.875134 CCTCTTTACTCTCTCTCGGTCTC 59.125 52.174 0.00 0.00 0.00 3.36
395 396 3.520317 TCCTCTTTACTCTCTCTCGGTCT 59.480 47.826 0.00 0.00 0.00 3.85
396 397 3.876341 TCCTCTTTACTCTCTCTCGGTC 58.124 50.000 0.00 0.00 0.00 4.79
397 398 4.019141 TCTTCCTCTTTACTCTCTCTCGGT 60.019 45.833 0.00 0.00 0.00 4.69
398 399 4.334481 GTCTTCCTCTTTACTCTCTCTCGG 59.666 50.000 0.00 0.00 0.00 4.63
399 400 4.938832 TGTCTTCCTCTTTACTCTCTCTCG 59.061 45.833 0.00 0.00 0.00 4.04
400 401 7.404671 AATGTCTTCCTCTTTACTCTCTCTC 57.595 40.000 0.00 0.00 0.00 3.20
401 402 7.790782 AAATGTCTTCCTCTTTACTCTCTCT 57.209 36.000 0.00 0.00 0.00 3.10
402 403 9.581099 CTAAAATGTCTTCCTCTTTACTCTCTC 57.419 37.037 0.00 0.00 0.00 3.20
403 404 8.536175 CCTAAAATGTCTTCCTCTTTACTCTCT 58.464 37.037 0.00 0.00 0.00 3.10
404 405 8.315482 ACCTAAAATGTCTTCCTCTTTACTCTC 58.685 37.037 0.00 0.00 0.00 3.20
405 406 8.208575 ACCTAAAATGTCTTCCTCTTTACTCT 57.791 34.615 0.00 0.00 0.00 3.24
406 407 8.850007 AACCTAAAATGTCTTCCTCTTTACTC 57.150 34.615 0.00 0.00 0.00 2.59
424 425 9.661563 CACCACTTACAGACATATAAACCTAAA 57.338 33.333 0.00 0.00 0.00 1.85
425 426 8.818860 ACACCACTTACAGACATATAAACCTAA 58.181 33.333 0.00 0.00 0.00 2.69
426 427 8.370266 ACACCACTTACAGACATATAAACCTA 57.630 34.615 0.00 0.00 0.00 3.08
427 428 7.253905 ACACCACTTACAGACATATAAACCT 57.746 36.000 0.00 0.00 0.00 3.50
428 429 7.916914 AACACCACTTACAGACATATAAACC 57.083 36.000 0.00 0.00 0.00 3.27
429 430 8.234546 CCAAACACCACTTACAGACATATAAAC 58.765 37.037 0.00 0.00 0.00 2.01
430 431 7.392113 CCCAAACACCACTTACAGACATATAAA 59.608 37.037 0.00 0.00 0.00 1.40
431 432 6.882140 CCCAAACACCACTTACAGACATATAA 59.118 38.462 0.00 0.00 0.00 0.98
432 433 6.411376 CCCAAACACCACTTACAGACATATA 58.589 40.000 0.00 0.00 0.00 0.86
433 434 5.253330 CCCAAACACCACTTACAGACATAT 58.747 41.667 0.00 0.00 0.00 1.78
434 435 4.505918 CCCCAAACACCACTTACAGACATA 60.506 45.833 0.00 0.00 0.00 2.29
435 436 3.486383 CCCAAACACCACTTACAGACAT 58.514 45.455 0.00 0.00 0.00 3.06
436 437 2.422235 CCCCAAACACCACTTACAGACA 60.422 50.000 0.00 0.00 0.00 3.41
437 438 2.227194 CCCCAAACACCACTTACAGAC 58.773 52.381 0.00 0.00 0.00 3.51
438 439 1.847737 ACCCCAAACACCACTTACAGA 59.152 47.619 0.00 0.00 0.00 3.41
439 440 2.227194 GACCCCAAACACCACTTACAG 58.773 52.381 0.00 0.00 0.00 2.74
440 441 1.133730 GGACCCCAAACACCACTTACA 60.134 52.381 0.00 0.00 0.00 2.41
441 442 1.133730 TGGACCCCAAACACCACTTAC 60.134 52.381 0.00 0.00 0.00 2.34
442 443 1.223501 TGGACCCCAAACACCACTTA 58.776 50.000 0.00 0.00 0.00 2.24
443 444 0.560688 ATGGACCCCAAACACCACTT 59.439 50.000 0.00 0.00 36.95 3.16
444 445 0.178964 CATGGACCCCAAACACCACT 60.179 55.000 0.00 0.00 36.95 4.00
445 446 0.469144 ACATGGACCCCAAACACCAC 60.469 55.000 0.00 0.00 36.95 4.16
446 447 1.149986 TACATGGACCCCAAACACCA 58.850 50.000 0.00 0.00 36.95 4.17
447 448 2.525105 ATACATGGACCCCAAACACC 57.475 50.000 0.00 0.00 36.95 4.16
448 449 4.532834 ACATATACATGGACCCCAAACAC 58.467 43.478 0.00 0.00 36.95 3.32
449 450 4.871871 ACATATACATGGACCCCAAACA 57.128 40.909 0.00 0.00 36.95 2.83
450 451 5.686753 TGTACATATACATGGACCCCAAAC 58.313 41.667 0.00 0.00 44.37 2.93
451 452 5.977821 TGTACATATACATGGACCCCAAA 57.022 39.130 0.00 0.00 44.37 3.28
473 474 6.234920 TGTTGTAACAAGCCAGTACATACAT 58.765 36.000 0.00 0.00 35.67 2.29
507 508 4.826733 TGTTGCAATACAAATGAGGTGTCT 59.173 37.500 0.59 0.00 40.82 3.41
512 513 8.586570 TTAGTTTTGTTGCAATACAAATGAGG 57.413 30.769 15.51 0.00 44.76 3.86
535 538 2.708861 TCCCACCTGCTTTGACTTCTTA 59.291 45.455 0.00 0.00 0.00 2.10
538 541 1.528129 CTCCCACCTGCTTTGACTTC 58.472 55.000 0.00 0.00 0.00 3.01
540 543 1.073897 GCTCCCACCTGCTTTGACT 59.926 57.895 0.00 0.00 0.00 3.41
554 557 2.132762 CGTATTTGTATCCACCGCTCC 58.867 52.381 0.00 0.00 0.00 4.70
582 585 1.202428 GGCGGACAAAGGAGTAGCTAG 60.202 57.143 0.00 0.00 0.00 3.42
589 592 1.033746 ATGCATGGCGGACAAAGGAG 61.034 55.000 0.00 0.00 0.00 3.69
593 596 1.603236 GGGAATGCATGGCGGACAAA 61.603 55.000 0.00 0.00 0.00 2.83
681 684 1.327690 TAGCCTACAGGGAACAGCGG 61.328 60.000 0.00 0.00 37.23 5.52
682 685 0.103208 CTAGCCTACAGGGAACAGCG 59.897 60.000 0.00 0.00 37.23 5.18
683 686 0.179070 GCTAGCCTACAGGGAACAGC 60.179 60.000 2.29 0.00 37.23 4.40
685 688 1.195115 CAGCTAGCCTACAGGGAACA 58.805 55.000 12.13 0.00 37.23 3.18
689 692 0.676736 GCTACAGCTAGCCTACAGGG 59.323 60.000 12.13 0.00 39.79 4.45
697 700 1.432270 CCGCTTTGGCTACAGCTAGC 61.432 60.000 6.62 6.62 44.34 3.42
698 701 0.175760 TCCGCTTTGGCTACAGCTAG 59.824 55.000 6.65 0.00 41.70 3.42
699 702 0.175760 CTCCGCTTTGGCTACAGCTA 59.824 55.000 6.65 0.00 41.70 3.32
701 704 2.754995 GCTCCGCTTTGGCTACAGC 61.755 63.158 0.00 0.00 37.80 4.40
702 705 1.078848 AGCTCCGCTTTGGCTACAG 60.079 57.895 0.00 0.00 33.89 2.74
703 706 3.068881 AGCTCCGCTTTGGCTACA 58.931 55.556 0.00 0.00 33.89 2.74
712 715 2.595463 TTGCAGCAAAGCTCCGCT 60.595 55.556 4.99 4.06 42.56 5.52
713 716 2.126580 CTTGCAGCAAAGCTCCGC 60.127 61.111 9.65 0.00 36.40 5.54
782 788 2.833582 ATCAGGTCGATCCGCCGT 60.834 61.111 0.00 0.00 41.99 5.68
783 789 2.049985 GATCAGGTCGATCCGCCG 60.050 66.667 0.00 0.00 44.25 6.46
825 831 1.152830 TGTGGGAAGAGGGCAAACC 59.847 57.895 0.00 0.00 40.67 3.27
964 973 2.033602 GCTAAGGTGGCCGTGGTT 59.966 61.111 0.00 0.00 0.00 3.67
975 984 0.460987 CTCTCGGGTTGCAGCTAAGG 60.461 60.000 0.00 0.00 0.00 2.69
992 1001 0.391661 TTGGCTCGCCATGAAGACTC 60.392 55.000 12.00 0.00 46.64 3.36
1055 1067 4.677832 CGTGTAAACAATTGTTACCTTGGC 59.322 41.667 23.53 9.78 37.25 4.52
1068 1080 5.270083 CAAGAACATGCTTCGTGTAAACAA 58.730 37.500 12.34 0.00 31.86 2.83
1069 1081 4.260990 CCAAGAACATGCTTCGTGTAAACA 60.261 41.667 16.32 0.00 31.86 2.83
1095 1107 2.293677 CCACACACCTACCTATAGCTCG 59.706 54.545 0.00 0.00 0.00 5.03
1105 1120 1.937899 GTTGTCACACCACACACCTAC 59.062 52.381 0.00 0.00 0.00 3.18
1455 1477 1.750930 CACCTGTGAGCTGACCAGT 59.249 57.895 0.00 0.00 0.00 4.00
1467 1489 0.898320 CTACCTAGCAGTGCACCTGT 59.102 55.000 19.20 10.98 43.55 4.00
1472 1494 4.232188 AGTAGTACTACCTAGCAGTGCA 57.768 45.455 25.97 2.32 36.75 4.57
1473 1495 4.213906 GCTAGTAGTACTACCTAGCAGTGC 59.786 50.000 32.53 21.54 39.60 4.40
1483 1505 3.788135 GCACACGCAGCTAGTAGTACTAC 60.788 52.174 23.03 23.03 38.36 2.73
1484 1506 2.353889 GCACACGCAGCTAGTAGTACTA 59.646 50.000 9.66 9.66 38.36 1.82
1485 1507 1.132643 GCACACGCAGCTAGTAGTACT 59.867 52.381 8.14 8.14 38.36 2.73
1740 1790 9.908152 GTTTTTGCTGTAATAATTTGTACTCCT 57.092 29.630 0.00 0.00 0.00 3.69
1741 1791 8.846607 CGTTTTTGCTGTAATAATTTGTACTCC 58.153 33.333 0.00 0.00 0.00 3.85
1747 1799 6.725780 GCGAACGTTTTTGCTGTAATAATTTG 59.274 34.615 0.46 0.00 38.89 2.32
1800 1852 7.094205 ACTGATTCATAGGCAATTTCTTTCGTT 60.094 33.333 0.00 0.00 0.00 3.85
1808 1860 5.664294 TGCAACTGATTCATAGGCAATTT 57.336 34.783 4.42 0.00 0.00 1.82
1809 1861 5.864418 ATGCAACTGATTCATAGGCAATT 57.136 34.783 9.39 0.00 33.09 2.32
1811 1863 4.705991 TGAATGCAACTGATTCATAGGCAA 59.294 37.500 9.39 0.00 33.09 4.52
1820 1872 2.923605 GCAACGCTGAATGCAACTGATT 60.924 45.455 0.00 0.00 42.12 2.57
1832 1884 0.880278 GGAGAACAGTGCAACGCTGA 60.880 55.000 14.60 0.00 43.78 4.26
1833 1885 0.882042 AGGAGAACAGTGCAACGCTG 60.882 55.000 6.60 6.60 45.86 5.18
1835 1887 0.235926 GAAGGAGAACAGTGCAACGC 59.764 55.000 0.00 0.00 45.86 4.84
1836 1888 1.871080 AGAAGGAGAACAGTGCAACG 58.129 50.000 0.00 0.00 45.86 4.10
1837 1889 2.550180 GGAAGAAGGAGAACAGTGCAAC 59.450 50.000 0.00 0.00 0.00 4.17
1838 1890 2.439507 AGGAAGAAGGAGAACAGTGCAA 59.560 45.455 0.00 0.00 0.00 4.08
1874 1949 1.378514 CAAGCCGTTATGCCTGGGT 60.379 57.895 0.00 0.00 34.33 4.51
2016 2091 1.119574 ACACCGTGTCTGGCTAAGGT 61.120 55.000 0.00 0.00 0.00 3.50
2059 2134 4.630069 GTGCATACGTAGACAACTGGAAAT 59.370 41.667 0.08 0.00 0.00 2.17
2060 2135 3.991773 GTGCATACGTAGACAACTGGAAA 59.008 43.478 0.08 0.00 0.00 3.13
2061 2136 3.581755 GTGCATACGTAGACAACTGGAA 58.418 45.455 0.08 0.00 0.00 3.53
2088 2163 7.922811 CCTTTCAGATTTTATAGCCAATTCCAC 59.077 37.037 0.00 0.00 0.00 4.02
2120 2195 1.425412 TTTTCTAACGCTCAGACGCC 58.575 50.000 0.00 0.00 36.19 5.68
2124 2199 9.607285 GATTGTTTAATTTTTCTAACGCTCAGA 57.393 29.630 0.00 0.00 0.00 3.27
2202 2277 6.270463 ACATCTCATTCATGCTAGAGGAGATT 59.730 38.462 15.57 9.44 37.90 2.40
2220 2295 8.352201 CCTTGTTATTTTGTTCTCAACATCTCA 58.648 33.333 0.00 0.00 41.79 3.27
2281 2358 2.544277 CGCAAATGCCATCCTGGTTATG 60.544 50.000 0.00 0.00 40.46 1.90
2285 2362 0.611618 TTCGCAAATGCCATCCTGGT 60.612 50.000 0.00 0.00 40.46 4.00
2320 2397 3.309296 TGCCATTCCCCAAACACTAAAA 58.691 40.909 0.00 0.00 0.00 1.52
2360 2467 5.556915 AGATCTGACGGTAACCATTTTTGA 58.443 37.500 0.00 0.00 0.00 2.69
2375 2482 7.157347 TCATAGCCACATGATAAAGATCTGAC 58.843 38.462 0.00 0.00 32.79 3.51
2385 2492 2.269023 CCCCCTCATAGCCACATGATA 58.731 52.381 0.00 0.00 34.50 2.15
2425 2532 1.202099 TATCTGGCAACCGTTCCCCA 61.202 55.000 0.00 0.00 0.00 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.