Multiple sequence alignment - TraesCS7A01G153400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G153400 | chr7A | 100.000 | 7427 | 0 | 0 | 1 | 7427 | 106749718 | 106742292 | 0.000000e+00 | 13716.0 |
1 | TraesCS7A01G153400 | chr7A | 83.651 | 2465 | 292 | 66 | 4305 | 6701 | 106995269 | 106992848 | 0.000000e+00 | 2217.0 |
2 | TraesCS7A01G153400 | chr7A | 83.598 | 2457 | 294 | 54 | 4321 | 6698 | 107153576 | 107151150 | 0.000000e+00 | 2204.0 |
3 | TraesCS7A01G153400 | chr7A | 92.234 | 1455 | 100 | 7 | 2039 | 3492 | 33738592 | 33740034 | 0.000000e+00 | 2049.0 |
4 | TraesCS7A01G153400 | chr7A | 81.723 | 1718 | 248 | 36 | 4926 | 6617 | 107322329 | 107320652 | 0.000000e+00 | 1373.0 |
5 | TraesCS7A01G153400 | chr7A | 86.130 | 721 | 58 | 8 | 3050 | 3732 | 71973611 | 71972895 | 0.000000e+00 | 739.0 |
6 | TraesCS7A01G153400 | chr7A | 94.144 | 444 | 20 | 3 | 328 | 769 | 106749841 | 106749402 | 0.000000e+00 | 671.0 |
7 | TraesCS7A01G153400 | chr7A | 86.054 | 588 | 46 | 16 | 740 | 1312 | 106774081 | 106773515 | 3.830000e-167 | 599.0 |
8 | TraesCS7A01G153400 | chr7A | 86.653 | 487 | 49 | 12 | 823 | 1304 | 107155965 | 107155490 | 6.600000e-145 | 525.0 |
9 | TraesCS7A01G153400 | chr7A | 94.375 | 320 | 13 | 3 | 1 | 317 | 106749267 | 106748950 | 3.120000e-133 | 486.0 |
10 | TraesCS7A01G153400 | chr7A | 88.339 | 283 | 27 | 6 | 1627 | 1904 | 106772541 | 106772260 | 1.190000e-87 | 335.0 |
11 | TraesCS7A01G153400 | chr7A | 79.206 | 529 | 72 | 19 | 4390 | 4884 | 107332936 | 107332412 | 4.290000e-87 | 333.0 |
12 | TraesCS7A01G153400 | chr7A | 86.395 | 294 | 34 | 2 | 1009 | 1302 | 107339146 | 107338859 | 4.320000e-82 | 316.0 |
13 | TraesCS7A01G153400 | chr7A | 79.603 | 353 | 38 | 15 | 975 | 1308 | 106999358 | 106999021 | 9.700000e-54 | 222.0 |
14 | TraesCS7A01G153400 | chr7A | 98.765 | 81 | 1 | 0 | 7176 | 7256 | 106742464 | 106742384 | 2.160000e-30 | 145.0 |
15 | TraesCS7A01G153400 | chr7A | 98.765 | 81 | 1 | 0 | 7255 | 7335 | 106742543 | 106742463 | 2.160000e-30 | 145.0 |
16 | TraesCS7A01G153400 | chr7A | 90.141 | 71 | 7 | 0 | 1399 | 1469 | 106772778 | 106772708 | 7.930000e-15 | 93.5 |
17 | TraesCS7A01G153400 | chr7B | 90.786 | 3169 | 216 | 29 | 4140 | 7256 | 59823773 | 59820629 | 0.000000e+00 | 4165.0 |
18 | TraesCS7A01G153400 | chr7B | 84.983 | 2637 | 303 | 41 | 4136 | 6701 | 60092789 | 60090175 | 0.000000e+00 | 2590.0 |
19 | TraesCS7A01G153400 | chr7B | 84.084 | 2463 | 272 | 58 | 4313 | 6698 | 60497032 | 60494613 | 0.000000e+00 | 2266.0 |
20 | TraesCS7A01G153400 | chr7B | 91.788 | 1169 | 61 | 6 | 4137 | 5279 | 60064665 | 60063506 | 0.000000e+00 | 1594.0 |
21 | TraesCS7A01G153400 | chr7B | 94.671 | 882 | 44 | 3 | 5265 | 6144 | 60060327 | 60059447 | 0.000000e+00 | 1365.0 |
22 | TraesCS7A01G153400 | chr7B | 77.764 | 2379 | 406 | 92 | 4389 | 6688 | 59668399 | 59666065 | 0.000000e+00 | 1349.0 |
23 | TraesCS7A01G153400 | chr7B | 85.748 | 1270 | 166 | 9 | 4926 | 6182 | 60565856 | 60564589 | 0.000000e+00 | 1328.0 |
24 | TraesCS7A01G153400 | chr7B | 91.030 | 903 | 52 | 10 | 458 | 1336 | 59825973 | 59825076 | 0.000000e+00 | 1192.0 |
25 | TraesCS7A01G153400 | chr7B | 78.754 | 1878 | 307 | 62 | 4382 | 6183 | 60605451 | 60603590 | 0.000000e+00 | 1173.0 |
26 | TraesCS7A01G153400 | chr7B | 87.033 | 910 | 47 | 18 | 458 | 1336 | 60094689 | 60093820 | 0.000000e+00 | 961.0 |
27 | TraesCS7A01G153400 | chr7B | 84.696 | 575 | 72 | 12 | 738 | 1304 | 60500343 | 60499777 | 1.810000e-155 | 560.0 |
28 | TraesCS7A01G153400 | chr7B | 85.882 | 510 | 56 | 8 | 1459 | 1959 | 60065198 | 60064696 | 5.100000e-146 | 529.0 |
29 | TraesCS7A01G153400 | chr7B | 94.203 | 345 | 16 | 2 | 827 | 1171 | 60065811 | 60065471 | 2.370000e-144 | 523.0 |
30 | TraesCS7A01G153400 | chr7B | 93.623 | 345 | 20 | 1 | 3798 | 4140 | 552018762 | 552018418 | 1.430000e-141 | 514.0 |
31 | TraesCS7A01G153400 | chr7B | 86.335 | 483 | 44 | 12 | 1484 | 1961 | 59824264 | 59823799 | 2.390000e-139 | 507.0 |
32 | TraesCS7A01G153400 | chr7B | 93.115 | 305 | 16 | 2 | 13 | 317 | 59825964 | 59825665 | 6.840000e-120 | 442.0 |
33 | TraesCS7A01G153400 | chr7B | 82.927 | 492 | 61 | 13 | 1484 | 1961 | 60093299 | 60092817 | 8.910000e-114 | 422.0 |
34 | TraesCS7A01G153400 | chr7B | 91.749 | 303 | 18 | 2 | 13 | 308 | 60094680 | 60094378 | 1.490000e-111 | 414.0 |
35 | TraesCS7A01G153400 | chr7B | 86.798 | 356 | 35 | 7 | 3449 | 3804 | 671200278 | 671199935 | 3.250000e-103 | 387.0 |
36 | TraesCS7A01G153400 | chr7B | 80.000 | 575 | 69 | 25 | 4356 | 4889 | 60566491 | 60565922 | 4.200000e-102 | 383.0 |
37 | TraesCS7A01G153400 | chr7B | 86.517 | 356 | 36 | 7 | 3449 | 3804 | 670906082 | 670905739 | 1.510000e-101 | 381.0 |
38 | TraesCS7A01G153400 | chr7B | 86.517 | 356 | 36 | 7 | 3449 | 3804 | 670947711 | 670947368 | 1.510000e-101 | 381.0 |
39 | TraesCS7A01G153400 | chr7B | 86.517 | 356 | 36 | 7 | 3449 | 3804 | 671092609 | 671092266 | 1.510000e-101 | 381.0 |
40 | TraesCS7A01G153400 | chr7B | 87.121 | 264 | 33 | 1 | 1039 | 1302 | 60570154 | 60569892 | 1.570000e-76 | 298.0 |
41 | TraesCS7A01G153400 | chr7B | 95.706 | 163 | 6 | 1 | 1201 | 1362 | 60065472 | 60065310 | 2.060000e-65 | 261.0 |
42 | TraesCS7A01G153400 | chr7B | 93.642 | 173 | 5 | 1 | 7255 | 7427 | 59820703 | 59820537 | 3.440000e-63 | 254.0 |
43 | TraesCS7A01G153400 | chr7B | 84.914 | 232 | 18 | 6 | 505 | 733 | 60066128 | 60065911 | 1.250000e-52 | 219.0 |
44 | TraesCS7A01G153400 | chr7B | 79.933 | 299 | 41 | 11 | 1012 | 1302 | 60610308 | 60610021 | 1.260000e-47 | 202.0 |
45 | TraesCS7A01G153400 | chr7B | 100.000 | 34 | 0 | 0 | 1993 | 2026 | 60064691 | 60064658 | 6.220000e-06 | 63.9 |
46 | TraesCS7A01G153400 | chr2A | 96.027 | 1787 | 63 | 4 | 2022 | 3804 | 45056164 | 45057946 | 0.000000e+00 | 2900.0 |
47 | TraesCS7A01G153400 | chr2A | 94.767 | 344 | 18 | 0 | 3793 | 4136 | 45057885 | 45058228 | 3.050000e-148 | 536.0 |
48 | TraesCS7A01G153400 | chr2A | 91.304 | 138 | 8 | 3 | 328 | 462 | 674059619 | 674059483 | 1.270000e-42 | 185.0 |
49 | TraesCS7A01G153400 | chr7D | 90.848 | 1792 | 119 | 19 | 2023 | 3795 | 628164145 | 628165910 | 0.000000e+00 | 2359.0 |
50 | TraesCS7A01G153400 | chr7D | 82.025 | 1274 | 202 | 21 | 4938 | 6194 | 102577982 | 102576719 | 0.000000e+00 | 1059.0 |
51 | TraesCS7A01G153400 | chr7D | 93.931 | 346 | 20 | 1 | 3793 | 4137 | 633169443 | 633169788 | 8.540000e-144 | 521.0 |
52 | TraesCS7A01G153400 | chr7D | 93.660 | 347 | 21 | 1 | 3793 | 4138 | 11078828 | 11079174 | 1.100000e-142 | 518.0 |
53 | TraesCS7A01G153400 | chr7D | 76.243 | 543 | 94 | 28 | 4382 | 4893 | 102578594 | 102578056 | 9.560000e-64 | 255.0 |
54 | TraesCS7A01G153400 | chr7D | 80.135 | 297 | 40 | 11 | 1014 | 1302 | 102583905 | 102583620 | 3.510000e-48 | 204.0 |
55 | TraesCS7A01G153400 | chr7D | 90.714 | 140 | 8 | 4 | 328 | 463 | 282878245 | 282878107 | 1.650000e-41 | 182.0 |
56 | TraesCS7A01G153400 | chr7D | 84.615 | 91 | 14 | 0 | 1107 | 1197 | 102752435 | 102752345 | 2.850000e-14 | 91.6 |
57 | TraesCS7A01G153400 | chr2D | 89.928 | 1797 | 120 | 23 | 2030 | 3795 | 6828584 | 6826818 | 0.000000e+00 | 2259.0 |
58 | TraesCS7A01G153400 | chr2D | 91.367 | 139 | 8 | 3 | 328 | 463 | 16229657 | 16229520 | 3.540000e-43 | 187.0 |
59 | TraesCS7A01G153400 | chr2D | 90.580 | 138 | 9 | 3 | 328 | 462 | 605451696 | 605451560 | 5.920000e-41 | 180.0 |
60 | TraesCS7A01G153400 | chr2D | 78.947 | 114 | 15 | 7 | 4186 | 4296 | 547812865 | 547812972 | 1.340000e-07 | 69.4 |
61 | TraesCS7A01G153400 | chrUn | 89.468 | 1804 | 119 | 27 | 2020 | 3795 | 45708288 | 45710048 | 0.000000e+00 | 2213.0 |
62 | TraesCS7A01G153400 | chrUn | 92.329 | 1108 | 64 | 7 | 2024 | 3130 | 45576363 | 45577450 | 0.000000e+00 | 1555.0 |
63 | TraesCS7A01G153400 | chrUn | 88.198 | 1093 | 82 | 19 | 2730 | 3795 | 105379262 | 105380334 | 0.000000e+00 | 1260.0 |
64 | TraesCS7A01G153400 | chrUn | 90.833 | 840 | 63 | 9 | 2027 | 2860 | 105378612 | 105379443 | 0.000000e+00 | 1112.0 |
65 | TraesCS7A01G153400 | chrUn | 93.842 | 341 | 19 | 1 | 3798 | 4136 | 49384801 | 49384461 | 5.140000e-141 | 512.0 |
66 | TraesCS7A01G153400 | chrUn | 86.798 | 356 | 35 | 7 | 3449 | 3804 | 147251157 | 147250814 | 3.250000e-103 | 387.0 |
67 | TraesCS7A01G153400 | chrUn | 86.798 | 356 | 35 | 7 | 3449 | 3804 | 279387810 | 279387467 | 3.250000e-103 | 387.0 |
68 | TraesCS7A01G153400 | chrUn | 86.236 | 356 | 37 | 7 | 3449 | 3804 | 447288726 | 447289069 | 7.040000e-100 | 375.0 |
69 | TraesCS7A01G153400 | chrUn | 90.511 | 137 | 9 | 3 | 328 | 461 | 34137413 | 34137548 | 2.130000e-40 | 178.0 |
70 | TraesCS7A01G153400 | chrUn | 90.370 | 135 | 9 | 3 | 328 | 459 | 31310832 | 31310965 | 2.750000e-39 | 174.0 |
71 | TraesCS7A01G153400 | chrUn | 90.226 | 133 | 9 | 3 | 330 | 459 | 84677028 | 84677159 | 3.560000e-38 | 171.0 |
72 | TraesCS7A01G153400 | chrUn | 89.630 | 135 | 10 | 3 | 328 | 459 | 63609161 | 63609294 | 1.280000e-37 | 169.0 |
73 | TraesCS7A01G153400 | chrUn | 89.630 | 135 | 10 | 3 | 328 | 459 | 74804456 | 74804323 | 1.280000e-37 | 169.0 |
74 | TraesCS7A01G153400 | chrUn | 89.552 | 134 | 10 | 3 | 328 | 458 | 348465370 | 348465502 | 4.610000e-37 | 167.0 |
75 | TraesCS7A01G153400 | chrUn | 88.889 | 135 | 11 | 3 | 328 | 459 | 62222395 | 62222262 | 5.960000e-36 | 163.0 |
76 | TraesCS7A01G153400 | chrUn | 87.970 | 133 | 12 | 3 | 330 | 459 | 42099527 | 42099396 | 3.590000e-33 | 154.0 |
77 | TraesCS7A01G153400 | chrUn | 87.407 | 135 | 13 | 3 | 330 | 461 | 287247801 | 287247934 | 1.290000e-32 | 152.0 |
78 | TraesCS7A01G153400 | chr4D | 89.424 | 1806 | 118 | 27 | 2029 | 3795 | 85593987 | 85595758 | 0.000000e+00 | 2209.0 |
79 | TraesCS7A01G153400 | chr4D | 90.580 | 138 | 9 | 3 | 328 | 462 | 419446133 | 419445997 | 5.920000e-41 | 180.0 |
80 | TraesCS7A01G153400 | chr4D | 90.370 | 135 | 9 | 3 | 328 | 459 | 437030306 | 437030173 | 2.750000e-39 | 174.0 |
81 | TraesCS7A01G153400 | chr4D | 89.286 | 140 | 11 | 3 | 328 | 464 | 52629488 | 52629626 | 9.910000e-39 | 172.0 |
82 | TraesCS7A01G153400 | chr4D | 88.028 | 142 | 13 | 3 | 323 | 461 | 403293312 | 403293452 | 1.660000e-36 | 165.0 |
83 | TraesCS7A01G153400 | chr6D | 93.274 | 1130 | 67 | 5 | 2027 | 3151 | 31486990 | 31485865 | 0.000000e+00 | 1657.0 |
84 | TraesCS7A01G153400 | chr6D | 89.051 | 137 | 11 | 3 | 328 | 461 | 309884029 | 309883894 | 4.610000e-37 | 167.0 |
85 | TraesCS7A01G153400 | chr6D | 88.889 | 135 | 11 | 3 | 328 | 459 | 8556760 | 8556893 | 5.960000e-36 | 163.0 |
86 | TraesCS7A01G153400 | chr5A | 93.073 | 895 | 57 | 5 | 2027 | 2920 | 675736679 | 675735789 | 0.000000e+00 | 1304.0 |
87 | TraesCS7A01G153400 | chr1A | 92.921 | 890 | 58 | 5 | 2027 | 2915 | 565748488 | 565747603 | 0.000000e+00 | 1290.0 |
88 | TraesCS7A01G153400 | chr1A | 89.510 | 143 | 11 | 3 | 328 | 467 | 564527791 | 564527650 | 2.130000e-40 | 178.0 |
89 | TraesCS7A01G153400 | chr3A | 91.905 | 630 | 46 | 3 | 2805 | 3429 | 691317432 | 691318061 | 0.000000e+00 | 876.0 |
90 | TraesCS7A01G153400 | chr1B | 85.958 | 762 | 72 | 16 | 3050 | 3795 | 523332621 | 523331879 | 0.000000e+00 | 782.0 |
91 | TraesCS7A01G153400 | chr1B | 91.760 | 267 | 22 | 0 | 3538 | 3804 | 643684 | 643950 | 9.100000e-99 | 372.0 |
92 | TraesCS7A01G153400 | chr5D | 94.186 | 344 | 19 | 1 | 3798 | 4141 | 523502883 | 523503225 | 2.370000e-144 | 523.0 |
93 | TraesCS7A01G153400 | chr5D | 93.895 | 344 | 20 | 1 | 3797 | 4139 | 149909896 | 149909553 | 1.100000e-142 | 518.0 |
94 | TraesCS7A01G153400 | chr5D | 89.437 | 142 | 11 | 3 | 323 | 461 | 244894109 | 244893969 | 7.660000e-40 | 176.0 |
95 | TraesCS7A01G153400 | chr5D | 90.476 | 42 | 1 | 3 | 1988 | 2026 | 434689324 | 434689365 | 1.300000e-02 | 52.8 |
96 | TraesCS7A01G153400 | chr2B | 93.895 | 344 | 19 | 1 | 3798 | 4139 | 695369520 | 695369177 | 1.100000e-142 | 518.0 |
97 | TraesCS7A01G153400 | chr5B | 93.860 | 342 | 19 | 1 | 3798 | 4137 | 118074326 | 118073985 | 1.430000e-141 | 514.0 |
98 | TraesCS7A01G153400 | chr5B | 91.241 | 137 | 8 | 3 | 328 | 461 | 518297698 | 518297833 | 4.580000e-42 | 183.0 |
99 | TraesCS7A01G153400 | chr5B | 91.176 | 136 | 8 | 3 | 330 | 462 | 554812462 | 554812596 | 1.650000e-41 | 182.0 |
100 | TraesCS7A01G153400 | chr6B | 91.241 | 137 | 8 | 3 | 328 | 461 | 678172232 | 678172367 | 4.580000e-42 | 183.0 |
101 | TraesCS7A01G153400 | chr6B | 96.774 | 31 | 1 | 0 | 1997 | 2027 | 88820574 | 88820544 | 1.300000e-02 | 52.8 |
102 | TraesCS7A01G153400 | chr4B | 91.241 | 137 | 8 | 3 | 328 | 461 | 218586295 | 218586430 | 4.580000e-42 | 183.0 |
103 | TraesCS7A01G153400 | chr4B | 94.595 | 37 | 0 | 2 | 4261 | 4297 | 82258089 | 82258123 | 1.000000e-03 | 56.5 |
104 | TraesCS7A01G153400 | chr1D | 90.580 | 138 | 9 | 3 | 329 | 463 | 26648389 | 26648253 | 5.920000e-41 | 180.0 |
105 | TraesCS7A01G153400 | chr1D | 89.855 | 138 | 10 | 3 | 328 | 462 | 259254200 | 259254336 | 2.750000e-39 | 174.0 |
106 | TraesCS7A01G153400 | chr1D | 89.781 | 137 | 10 | 3 | 328 | 461 | 4438816 | 4438681 | 9.910000e-39 | 172.0 |
107 | TraesCS7A01G153400 | chr3D | 89.041 | 146 | 10 | 4 | 328 | 470 | 598156778 | 598156920 | 7.660000e-40 | 176.0 |
108 | TraesCS7A01G153400 | chr3D | 90.370 | 135 | 9 | 3 | 328 | 459 | 145199506 | 145199639 | 2.750000e-39 | 174.0 |
109 | TraesCS7A01G153400 | chr6A | 100.000 | 29 | 0 | 0 | 1998 | 2026 | 609828461 | 609828489 | 4.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G153400 | chr7A | 106742292 | 106749718 | 7426 | True | 13716.000000 | 13716 | 100.000000 | 1 | 7427 | 1 | chr7A.!!$R2 | 7426 |
1 | TraesCS7A01G153400 | chr7A | 33738592 | 33740034 | 1442 | False | 2049.000000 | 2049 | 92.234000 | 2039 | 3492 | 1 | chr7A.!!$F1 | 1453 |
2 | TraesCS7A01G153400 | chr7A | 107320652 | 107322329 | 1677 | True | 1373.000000 | 1373 | 81.723000 | 4926 | 6617 | 1 | chr7A.!!$R3 | 1691 |
3 | TraesCS7A01G153400 | chr7A | 107151150 | 107155965 | 4815 | True | 1364.500000 | 2204 | 85.125500 | 823 | 6698 | 2 | chr7A.!!$R10 | 5875 |
4 | TraesCS7A01G153400 | chr7A | 106992848 | 106999358 | 6510 | True | 1219.500000 | 2217 | 81.627000 | 975 | 6701 | 2 | chr7A.!!$R9 | 5726 |
5 | TraesCS7A01G153400 | chr7A | 71972895 | 71973611 | 716 | True | 739.000000 | 739 | 86.130000 | 3050 | 3732 | 1 | chr7A.!!$R1 | 682 |
6 | TraesCS7A01G153400 | chr7A | 106748950 | 106749841 | 891 | True | 578.500000 | 671 | 94.259500 | 1 | 769 | 2 | chr7A.!!$R7 | 768 |
7 | TraesCS7A01G153400 | chr7A | 106772260 | 106774081 | 1821 | True | 342.500000 | 599 | 88.178000 | 740 | 1904 | 3 | chr7A.!!$R8 | 1164 |
8 | TraesCS7A01G153400 | chr7A | 107332412 | 107332936 | 524 | True | 333.000000 | 333 | 79.206000 | 4390 | 4884 | 1 | chr7A.!!$R4 | 494 |
9 | TraesCS7A01G153400 | chr7B | 60494613 | 60500343 | 5730 | True | 1413.000000 | 2266 | 84.390000 | 738 | 6698 | 2 | chr7B.!!$R12 | 5960 |
10 | TraesCS7A01G153400 | chr7B | 59666065 | 59668399 | 2334 | True | 1349.000000 | 1349 | 77.764000 | 4389 | 6688 | 1 | chr7B.!!$R1 | 2299 |
11 | TraesCS7A01G153400 | chr7B | 59820537 | 59825973 | 5436 | True | 1312.000000 | 4165 | 90.981600 | 13 | 7427 | 5 | chr7B.!!$R9 | 7414 |
12 | TraesCS7A01G153400 | chr7B | 60603590 | 60605451 | 1861 | True | 1173.000000 | 1173 | 78.754000 | 4382 | 6183 | 1 | chr7B.!!$R2 | 1801 |
13 | TraesCS7A01G153400 | chr7B | 60090175 | 60094689 | 4514 | True | 1096.750000 | 2590 | 86.673000 | 13 | 6701 | 4 | chr7B.!!$R11 | 6688 |
14 | TraesCS7A01G153400 | chr7B | 60564589 | 60570154 | 5565 | True | 669.666667 | 1328 | 84.289667 | 1039 | 6182 | 3 | chr7B.!!$R13 | 5143 |
15 | TraesCS7A01G153400 | chr7B | 60059447 | 60066128 | 6681 | True | 650.700000 | 1594 | 92.452000 | 505 | 6144 | 7 | chr7B.!!$R10 | 5639 |
16 | TraesCS7A01G153400 | chr2A | 45056164 | 45058228 | 2064 | False | 1718.000000 | 2900 | 95.397000 | 2022 | 4136 | 2 | chr2A.!!$F1 | 2114 |
17 | TraesCS7A01G153400 | chr7D | 628164145 | 628165910 | 1765 | False | 2359.000000 | 2359 | 90.848000 | 2023 | 3795 | 1 | chr7D.!!$F2 | 1772 |
18 | TraesCS7A01G153400 | chr7D | 102576719 | 102578594 | 1875 | True | 657.000000 | 1059 | 79.134000 | 4382 | 6194 | 2 | chr7D.!!$R4 | 1812 |
19 | TraesCS7A01G153400 | chr2D | 6826818 | 6828584 | 1766 | True | 2259.000000 | 2259 | 89.928000 | 2030 | 3795 | 1 | chr2D.!!$R1 | 1765 |
20 | TraesCS7A01G153400 | chrUn | 45708288 | 45710048 | 1760 | False | 2213.000000 | 2213 | 89.468000 | 2020 | 3795 | 1 | chrUn.!!$F4 | 1775 |
21 | TraesCS7A01G153400 | chrUn | 45576363 | 45577450 | 1087 | False | 1555.000000 | 1555 | 92.329000 | 2024 | 3130 | 1 | chrUn.!!$F3 | 1106 |
22 | TraesCS7A01G153400 | chrUn | 105378612 | 105380334 | 1722 | False | 1186.000000 | 1260 | 89.515500 | 2027 | 3795 | 2 | chrUn.!!$F10 | 1768 |
23 | TraesCS7A01G153400 | chr4D | 85593987 | 85595758 | 1771 | False | 2209.000000 | 2209 | 89.424000 | 2029 | 3795 | 1 | chr4D.!!$F2 | 1766 |
24 | TraesCS7A01G153400 | chr6D | 31485865 | 31486990 | 1125 | True | 1657.000000 | 1657 | 93.274000 | 2027 | 3151 | 1 | chr6D.!!$R1 | 1124 |
25 | TraesCS7A01G153400 | chr5A | 675735789 | 675736679 | 890 | True | 1304.000000 | 1304 | 93.073000 | 2027 | 2920 | 1 | chr5A.!!$R1 | 893 |
26 | TraesCS7A01G153400 | chr1A | 565747603 | 565748488 | 885 | True | 1290.000000 | 1290 | 92.921000 | 2027 | 2915 | 1 | chr1A.!!$R2 | 888 |
27 | TraesCS7A01G153400 | chr3A | 691317432 | 691318061 | 629 | False | 876.000000 | 876 | 91.905000 | 2805 | 3429 | 1 | chr3A.!!$F1 | 624 |
28 | TraesCS7A01G153400 | chr1B | 523331879 | 523332621 | 742 | True | 782.000000 | 782 | 85.958000 | 3050 | 3795 | 1 | chr1B.!!$R1 | 745 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
688 | 822 | 0.107165 | GAGGGCGCCTTTTCTATGGT | 60.107 | 55.000 | 28.56 | 0.00 | 31.76 | 3.55 | F |
1693 | 8974 | 0.037512 | CTCTGACCTCTGTGGCTGTG | 60.038 | 60.000 | 0.00 | 0.00 | 40.22 | 3.66 | F |
1976 | 9562 | 0.041135 | CGTACTCACTAGCCGCTAGC | 60.041 | 60.000 | 24.59 | 4.06 | 37.57 | 3.42 | F |
1988 | 9574 | 0.671781 | CCGCTAGCTGCAGTTTGAGT | 60.672 | 55.000 | 16.64 | 0.00 | 43.06 | 3.41 | F |
2209 | 9825 | 1.135402 | CCAACTGCCGCCAATCTTTAC | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 | F |
3773 | 11558 | 0.026803 | GAAACACGGCATCGCTCATC | 59.973 | 55.000 | 0.00 | 0.00 | 40.63 | 2.92 | F |
4138 | 11923 | 0.251354 | TCGTACGTCCAGTCCTAGCT | 59.749 | 55.000 | 16.05 | 0.00 | 0.00 | 3.32 | F |
5862 | 16969 | 1.008875 | TGTTCTTGCAGCGCTACGAG | 61.009 | 55.000 | 17.59 | 17.59 | 0.00 | 4.18 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2057 | 9643 | 0.038166 | AAAGCCAGGCTCGGATCAAA | 59.962 | 50.0 | 16.53 | 0.00 | 38.25 | 2.69 | R |
3599 | 11377 | 0.045623 | TCCTTCCCAATCCCTAGCCA | 59.954 | 55.0 | 0.00 | 0.00 | 0.00 | 4.75 | R |
3754 | 11539 | 0.026803 | GATGAGCGATGCCGTGTTTC | 59.973 | 55.0 | 0.00 | 0.00 | 38.24 | 2.78 | R |
3773 | 11558 | 0.313043 | GCAAATCTGGATCCATGGCG | 59.687 | 55.0 | 16.63 | 3.29 | 0.00 | 5.69 | R |
3778 | 11563 | 0.327924 | ACACCGCAAATCTGGATCCA | 59.672 | 50.0 | 15.27 | 15.27 | 0.00 | 3.41 | R |
5536 | 16636 | 0.389166 | GTCACCACTCTTCTGGAGCG | 60.389 | 60.0 | 0.00 | 0.00 | 45.48 | 5.03 | R |
5913 | 17027 | 1.201343 | GCGCAGAATCTAGACGGAAC | 58.799 | 55.0 | 0.30 | 0.00 | 0.00 | 3.62 | R |
6881 | 18040 | 0.174845 | TGCCTCGGTTCGGATTACAG | 59.825 | 55.0 | 0.00 | 0.00 | 0.00 | 2.74 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
199 | 330 | 1.676529 | CGAGCCAAGAGACCGAAGATA | 59.323 | 52.381 | 0.00 | 0.00 | 0.00 | 1.98 |
229 | 360 | 2.360475 | GCTGAGGGCGCCTTTTCT | 60.360 | 61.111 | 28.56 | 15.32 | 31.76 | 2.52 |
240 | 371 | 1.544724 | GCCTTTTCTATGGTGCCACA | 58.455 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
317 | 448 | 3.852578 | AGGGAGAGAGAGAGAGACTTTCT | 59.147 | 47.826 | 0.00 | 0.00 | 41.77 | 2.52 |
318 | 449 | 4.292306 | AGGGAGAGAGAGAGAGACTTTCTT | 59.708 | 45.833 | 0.00 | 0.00 | 39.66 | 2.52 |
320 | 451 | 6.160459 | AGGGAGAGAGAGAGAGACTTTCTTAT | 59.840 | 42.308 | 0.00 | 0.00 | 39.66 | 1.73 |
321 | 452 | 6.263168 | GGGAGAGAGAGAGAGACTTTCTTATG | 59.737 | 46.154 | 0.00 | 0.00 | 39.66 | 1.90 |
322 | 453 | 6.263168 | GGAGAGAGAGAGAGACTTTCTTATGG | 59.737 | 46.154 | 0.00 | 0.00 | 39.66 | 2.74 |
323 | 454 | 6.969043 | AGAGAGAGAGAGACTTTCTTATGGA | 58.031 | 40.000 | 0.00 | 0.00 | 39.66 | 3.41 |
324 | 455 | 7.586349 | AGAGAGAGAGAGACTTTCTTATGGAT | 58.414 | 38.462 | 0.00 | 0.00 | 39.66 | 3.41 |
325 | 456 | 8.723365 | AGAGAGAGAGAGACTTTCTTATGGATA | 58.277 | 37.037 | 0.00 | 0.00 | 39.66 | 2.59 |
326 | 457 | 9.520515 | GAGAGAGAGAGACTTTCTTATGGATAT | 57.479 | 37.037 | 0.00 | 0.00 | 39.66 | 1.63 |
381 | 512 | 6.743575 | TCTTAAATAAGAGAAGTGCAAGCC | 57.256 | 37.500 | 0.00 | 0.00 | 37.40 | 4.35 |
382 | 513 | 6.476378 | TCTTAAATAAGAGAAGTGCAAGCCT | 58.524 | 36.000 | 0.00 | 0.00 | 37.40 | 4.58 |
383 | 514 | 6.942576 | TCTTAAATAAGAGAAGTGCAAGCCTT | 59.057 | 34.615 | 0.00 | 0.00 | 37.40 | 4.35 |
384 | 515 | 7.448469 | TCTTAAATAAGAGAAGTGCAAGCCTTT | 59.552 | 33.333 | 0.00 | 0.00 | 37.40 | 3.11 |
385 | 516 | 6.410942 | AAATAAGAGAAGTGCAAGCCTTTT | 57.589 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
386 | 517 | 3.998099 | AAGAGAAGTGCAAGCCTTTTC | 57.002 | 42.857 | 0.00 | 0.00 | 0.00 | 2.29 |
387 | 518 | 3.220674 | AGAGAAGTGCAAGCCTTTTCT | 57.779 | 42.857 | 3.55 | 3.55 | 30.83 | 2.52 |
388 | 519 | 3.560105 | AGAGAAGTGCAAGCCTTTTCTT | 58.440 | 40.909 | 3.55 | 0.00 | 31.43 | 2.52 |
389 | 520 | 4.718961 | AGAGAAGTGCAAGCCTTTTCTTA | 58.281 | 39.130 | 3.55 | 0.00 | 31.43 | 2.10 |
390 | 521 | 5.320277 | AGAGAAGTGCAAGCCTTTTCTTAT | 58.680 | 37.500 | 3.55 | 0.00 | 31.43 | 1.73 |
391 | 522 | 5.182760 | AGAGAAGTGCAAGCCTTTTCTTATG | 59.817 | 40.000 | 3.55 | 0.00 | 31.43 | 1.90 |
392 | 523 | 5.072741 | AGAAGTGCAAGCCTTTTCTTATGA | 58.927 | 37.500 | 0.00 | 0.00 | 0.00 | 2.15 |
393 | 524 | 4.773323 | AGTGCAAGCCTTTTCTTATGAC | 57.227 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
394 | 525 | 4.401925 | AGTGCAAGCCTTTTCTTATGACT | 58.598 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
395 | 526 | 4.829492 | AGTGCAAGCCTTTTCTTATGACTT | 59.171 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
396 | 527 | 5.048434 | AGTGCAAGCCTTTTCTTATGACTTC | 60.048 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
397 | 528 | 5.048434 | GTGCAAGCCTTTTCTTATGACTTCT | 60.048 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
398 | 529 | 5.182001 | TGCAAGCCTTTTCTTATGACTTCTC | 59.818 | 40.000 | 0.00 | 0.00 | 0.00 | 2.87 |
399 | 530 | 5.414144 | GCAAGCCTTTTCTTATGACTTCTCT | 59.586 | 40.000 | 0.00 | 0.00 | 0.00 | 3.10 |
400 | 531 | 6.403092 | GCAAGCCTTTTCTTATGACTTCTCTC | 60.403 | 42.308 | 0.00 | 0.00 | 0.00 | 3.20 |
401 | 532 | 6.619329 | AGCCTTTTCTTATGACTTCTCTCT | 57.381 | 37.500 | 0.00 | 0.00 | 0.00 | 3.10 |
402 | 533 | 6.639563 | AGCCTTTTCTTATGACTTCTCTCTC | 58.360 | 40.000 | 0.00 | 0.00 | 0.00 | 3.20 |
403 | 534 | 5.815222 | GCCTTTTCTTATGACTTCTCTCTCC | 59.185 | 44.000 | 0.00 | 0.00 | 0.00 | 3.71 |
404 | 535 | 6.351796 | GCCTTTTCTTATGACTTCTCTCTCCT | 60.352 | 42.308 | 0.00 | 0.00 | 0.00 | 3.69 |
405 | 536 | 7.264947 | CCTTTTCTTATGACTTCTCTCTCCTC | 58.735 | 42.308 | 0.00 | 0.00 | 0.00 | 3.71 |
406 | 537 | 6.783708 | TTTCTTATGACTTCTCTCTCCTCC | 57.216 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
407 | 538 | 5.458451 | TCTTATGACTTCTCTCTCCTCCA | 57.542 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
408 | 539 | 5.197451 | TCTTATGACTTCTCTCTCCTCCAC | 58.803 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
409 | 540 | 2.223803 | TGACTTCTCTCTCCTCCACC | 57.776 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
410 | 541 | 1.713647 | TGACTTCTCTCTCCTCCACCT | 59.286 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
411 | 542 | 2.291282 | TGACTTCTCTCTCCTCCACCTC | 60.291 | 54.545 | 0.00 | 0.00 | 0.00 | 3.85 |
412 | 543 | 1.713647 | ACTTCTCTCTCCTCCACCTCA | 59.286 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
413 | 544 | 2.314549 | ACTTCTCTCTCCTCCACCTCAT | 59.685 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
414 | 545 | 2.746279 | TCTCTCTCCTCCACCTCATC | 57.254 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
415 | 546 | 1.925959 | TCTCTCTCCTCCACCTCATCA | 59.074 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
416 | 547 | 2.517553 | TCTCTCTCCTCCACCTCATCAT | 59.482 | 50.000 | 0.00 | 0.00 | 0.00 | 2.45 |
417 | 548 | 2.892852 | CTCTCTCCTCCACCTCATCATC | 59.107 | 54.545 | 0.00 | 0.00 | 0.00 | 2.92 |
418 | 549 | 2.517553 | TCTCTCCTCCACCTCATCATCT | 59.482 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
419 | 550 | 3.724209 | TCTCTCCTCCACCTCATCATCTA | 59.276 | 47.826 | 0.00 | 0.00 | 0.00 | 1.98 |
420 | 551 | 4.356492 | TCTCTCCTCCACCTCATCATCTAT | 59.644 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
421 | 552 | 5.085275 | TCTCCTCCACCTCATCATCTATT | 57.915 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
422 | 553 | 4.837298 | TCTCCTCCACCTCATCATCTATTG | 59.163 | 45.833 | 0.00 | 0.00 | 0.00 | 1.90 |
423 | 554 | 4.560739 | TCCTCCACCTCATCATCTATTGT | 58.439 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
424 | 555 | 5.715921 | TCCTCCACCTCATCATCTATTGTA | 58.284 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
425 | 556 | 5.540337 | TCCTCCACCTCATCATCTATTGTAC | 59.460 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
426 | 557 | 5.453567 | TCCACCTCATCATCTATTGTACG | 57.546 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
427 | 558 | 4.893524 | TCCACCTCATCATCTATTGTACGT | 59.106 | 41.667 | 0.00 | 0.00 | 0.00 | 3.57 |
428 | 559 | 4.984785 | CCACCTCATCATCTATTGTACGTG | 59.015 | 45.833 | 0.00 | 0.00 | 0.00 | 4.49 |
429 | 560 | 5.451937 | CCACCTCATCATCTATTGTACGTGT | 60.452 | 44.000 | 0.00 | 0.00 | 0.00 | 4.49 |
430 | 561 | 5.687730 | CACCTCATCATCTATTGTACGTGTC | 59.312 | 44.000 | 0.00 | 0.00 | 0.00 | 3.67 |
431 | 562 | 5.359860 | ACCTCATCATCTATTGTACGTGTCA | 59.640 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
432 | 563 | 6.040955 | ACCTCATCATCTATTGTACGTGTCAT | 59.959 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
433 | 564 | 6.925718 | CCTCATCATCTATTGTACGTGTCATT | 59.074 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
434 | 565 | 7.115520 | CCTCATCATCTATTGTACGTGTCATTC | 59.884 | 40.741 | 0.00 | 0.00 | 0.00 | 2.67 |
435 | 566 | 6.923508 | TCATCATCTATTGTACGTGTCATTCC | 59.076 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
436 | 567 | 6.465439 | TCATCTATTGTACGTGTCATTCCT | 57.535 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
437 | 568 | 7.576861 | TCATCTATTGTACGTGTCATTCCTA | 57.423 | 36.000 | 0.00 | 0.00 | 0.00 | 2.94 |
438 | 569 | 8.002984 | TCATCTATTGTACGTGTCATTCCTAA | 57.997 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
439 | 570 | 8.135529 | TCATCTATTGTACGTGTCATTCCTAAG | 58.864 | 37.037 | 0.00 | 0.00 | 0.00 | 2.18 |
440 | 571 | 7.634671 | TCTATTGTACGTGTCATTCCTAAGA | 57.365 | 36.000 | 0.00 | 0.00 | 0.00 | 2.10 |
441 | 572 | 8.234136 | TCTATTGTACGTGTCATTCCTAAGAT | 57.766 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
442 | 573 | 9.346005 | TCTATTGTACGTGTCATTCCTAAGATA | 57.654 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
443 | 574 | 9.961265 | CTATTGTACGTGTCATTCCTAAGATAA | 57.039 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
444 | 575 | 8.644318 | ATTGTACGTGTCATTCCTAAGATAAC | 57.356 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
445 | 576 | 7.160547 | TGTACGTGTCATTCCTAAGATAACA | 57.839 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
446 | 577 | 7.778083 | TGTACGTGTCATTCCTAAGATAACAT | 58.222 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
447 | 578 | 8.255206 | TGTACGTGTCATTCCTAAGATAACATT | 58.745 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
448 | 579 | 7.539712 | ACGTGTCATTCCTAAGATAACATTG | 57.460 | 36.000 | 0.00 | 0.00 | 0.00 | 2.82 |
449 | 580 | 7.103641 | ACGTGTCATTCCTAAGATAACATTGT | 58.896 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
450 | 581 | 8.255206 | ACGTGTCATTCCTAAGATAACATTGTA | 58.745 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
451 | 582 | 8.540492 | CGTGTCATTCCTAAGATAACATTGTAC | 58.460 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
452 | 583 | 9.378551 | GTGTCATTCCTAAGATAACATTGTACA | 57.621 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
455 | 586 | 9.056005 | TCATTCCTAAGATAACATTGTACATGC | 57.944 | 33.333 | 0.00 | 0.00 | 0.00 | 4.06 |
456 | 587 | 7.801716 | TTCCTAAGATAACATTGTACATGCC | 57.198 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
457 | 588 | 6.296026 | TCCTAAGATAACATTGTACATGCCC | 58.704 | 40.000 | 0.00 | 0.00 | 0.00 | 5.36 |
458 | 589 | 6.101150 | TCCTAAGATAACATTGTACATGCCCT | 59.899 | 38.462 | 0.00 | 0.00 | 0.00 | 5.19 |
459 | 590 | 7.291416 | TCCTAAGATAACATTGTACATGCCCTA | 59.709 | 37.037 | 0.00 | 0.00 | 0.00 | 3.53 |
460 | 591 | 7.936847 | CCTAAGATAACATTGTACATGCCCTAA | 59.063 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
461 | 592 | 9.507329 | CTAAGATAACATTGTACATGCCCTAAT | 57.493 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
463 | 594 | 8.848474 | AGATAACATTGTACATGCCCTAATAC | 57.152 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
464 | 595 | 8.436778 | AGATAACATTGTACATGCCCTAATACA | 58.563 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
465 | 596 | 6.942532 | AACATTGTACATGCCCTAATACAG | 57.057 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
466 | 597 | 4.821805 | ACATTGTACATGCCCTAATACAGC | 59.178 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
467 | 598 | 4.495690 | TTGTACATGCCCTAATACAGCA | 57.504 | 40.909 | 0.00 | 0.00 | 41.50 | 4.41 |
468 | 599 | 4.495690 | TGTACATGCCCTAATACAGCAA | 57.504 | 40.909 | 0.00 | 0.00 | 40.46 | 3.91 |
469 | 600 | 4.450976 | TGTACATGCCCTAATACAGCAAG | 58.549 | 43.478 | 0.00 | 0.00 | 40.46 | 4.01 |
470 | 601 | 2.936202 | ACATGCCCTAATACAGCAAGG | 58.064 | 47.619 | 0.00 | 0.00 | 40.46 | 3.61 |
471 | 602 | 2.509548 | ACATGCCCTAATACAGCAAGGA | 59.490 | 45.455 | 0.00 | 0.00 | 40.46 | 3.36 |
472 | 603 | 3.139025 | ACATGCCCTAATACAGCAAGGAT | 59.861 | 43.478 | 0.00 | 0.00 | 40.46 | 3.24 |
473 | 604 | 3.492102 | TGCCCTAATACAGCAAGGATC | 57.508 | 47.619 | 0.00 | 0.00 | 32.56 | 3.36 |
474 | 605 | 3.048600 | TGCCCTAATACAGCAAGGATCT | 58.951 | 45.455 | 0.00 | 0.00 | 32.56 | 2.75 |
475 | 606 | 4.231273 | TGCCCTAATACAGCAAGGATCTA | 58.769 | 43.478 | 0.00 | 0.00 | 32.56 | 1.98 |
476 | 607 | 4.846367 | TGCCCTAATACAGCAAGGATCTAT | 59.154 | 41.667 | 0.00 | 0.00 | 32.56 | 1.98 |
477 | 608 | 6.022958 | TGCCCTAATACAGCAAGGATCTATA | 58.977 | 40.000 | 0.00 | 0.00 | 32.56 | 1.31 |
478 | 609 | 6.673978 | TGCCCTAATACAGCAAGGATCTATAT | 59.326 | 38.462 | 0.00 | 0.00 | 32.56 | 0.86 |
479 | 610 | 7.844269 | TGCCCTAATACAGCAAGGATCTATATA | 59.156 | 37.037 | 0.00 | 0.00 | 32.56 | 0.86 |
480 | 611 | 8.875168 | GCCCTAATACAGCAAGGATCTATATAT | 58.125 | 37.037 | 0.00 | 0.00 | 31.64 | 0.86 |
482 | 613 | 9.703892 | CCTAATACAGCAAGGATCTATATATGC | 57.296 | 37.037 | 0.00 | 0.00 | 31.64 | 3.14 |
483 | 614 | 9.703892 | CTAATACAGCAAGGATCTATATATGCC | 57.296 | 37.037 | 0.00 | 0.00 | 34.44 | 4.40 |
484 | 615 | 5.365021 | ACAGCAAGGATCTATATATGCCC | 57.635 | 43.478 | 0.00 | 0.00 | 34.44 | 5.36 |
485 | 616 | 4.784838 | ACAGCAAGGATCTATATATGCCCA | 59.215 | 41.667 | 0.00 | 0.00 | 34.44 | 5.36 |
486 | 617 | 5.431073 | ACAGCAAGGATCTATATATGCCCAT | 59.569 | 40.000 | 0.00 | 0.00 | 34.44 | 4.00 |
487 | 618 | 6.069206 | ACAGCAAGGATCTATATATGCCCATT | 60.069 | 38.462 | 0.00 | 0.00 | 34.44 | 3.16 |
488 | 619 | 6.485984 | CAGCAAGGATCTATATATGCCCATTC | 59.514 | 42.308 | 0.00 | 0.00 | 34.44 | 2.67 |
489 | 620 | 6.389278 | AGCAAGGATCTATATATGCCCATTCT | 59.611 | 38.462 | 0.00 | 0.00 | 34.44 | 2.40 |
490 | 621 | 7.059156 | GCAAGGATCTATATATGCCCATTCTT | 58.941 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
491 | 622 | 7.013083 | GCAAGGATCTATATATGCCCATTCTTG | 59.987 | 40.741 | 0.00 | 4.17 | 0.00 | 3.02 |
492 | 623 | 6.599445 | AGGATCTATATATGCCCATTCTTGC | 58.401 | 40.000 | 0.00 | 0.00 | 0.00 | 4.01 |
493 | 624 | 5.468072 | GGATCTATATATGCCCATTCTTGCG | 59.532 | 44.000 | 0.00 | 0.00 | 0.00 | 4.85 |
494 | 625 | 4.769688 | TCTATATATGCCCATTCTTGCGG | 58.230 | 43.478 | 0.00 | 0.00 | 0.00 | 5.69 |
495 | 626 | 1.533625 | TATATGCCCATTCTTGCGGC | 58.466 | 50.000 | 0.00 | 0.00 | 38.77 | 6.53 |
496 | 627 | 0.178981 | ATATGCCCATTCTTGCGGCT | 60.179 | 50.000 | 0.00 | 0.00 | 38.96 | 5.52 |
497 | 628 | 1.102809 | TATGCCCATTCTTGCGGCTG | 61.103 | 55.000 | 0.00 | 0.00 | 38.96 | 4.85 |
498 | 629 | 3.064324 | GCCCATTCTTGCGGCTGT | 61.064 | 61.111 | 0.00 | 0.00 | 36.69 | 4.40 |
499 | 630 | 3.056313 | GCCCATTCTTGCGGCTGTC | 62.056 | 63.158 | 0.00 | 0.00 | 36.69 | 3.51 |
500 | 631 | 2.753966 | CCCATTCTTGCGGCTGTCG | 61.754 | 63.158 | 0.00 | 0.00 | 42.76 | 4.35 |
501 | 632 | 2.034879 | CCATTCTTGCGGCTGTCGT | 61.035 | 57.895 | 2.76 | 0.00 | 41.72 | 4.34 |
502 | 633 | 1.577328 | CCATTCTTGCGGCTGTCGTT | 61.577 | 55.000 | 2.76 | 0.00 | 41.72 | 3.85 |
503 | 634 | 1.075542 | CATTCTTGCGGCTGTCGTTA | 58.924 | 50.000 | 2.76 | 0.00 | 41.72 | 3.18 |
504 | 635 | 1.665679 | CATTCTTGCGGCTGTCGTTAT | 59.334 | 47.619 | 2.76 | 0.00 | 41.72 | 1.89 |
505 | 636 | 1.803334 | TTCTTGCGGCTGTCGTTATT | 58.197 | 45.000 | 2.76 | 0.00 | 41.72 | 1.40 |
506 | 637 | 1.803334 | TCTTGCGGCTGTCGTTATTT | 58.197 | 45.000 | 2.76 | 0.00 | 41.72 | 1.40 |
507 | 638 | 2.147958 | TCTTGCGGCTGTCGTTATTTT | 58.852 | 42.857 | 2.76 | 0.00 | 41.72 | 1.82 |
508 | 639 | 2.550606 | TCTTGCGGCTGTCGTTATTTTT | 59.449 | 40.909 | 2.76 | 0.00 | 41.72 | 1.94 |
539 | 670 | 5.070714 | TGTCTGTGTTTTAGTTACCCTAGCA | 59.929 | 40.000 | 0.00 | 0.00 | 0.00 | 3.49 |
577 | 711 | 3.006940 | GTTGACACTGACACCAGAAACA | 58.993 | 45.455 | 0.00 | 0.00 | 43.02 | 2.83 |
578 | 712 | 3.558931 | TGACACTGACACCAGAAACAT | 57.441 | 42.857 | 0.00 | 0.00 | 43.02 | 2.71 |
589 | 723 | 3.057734 | ACCAGAAACATCGTCGAAACTC | 58.942 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
590 | 724 | 2.090658 | CCAGAAACATCGTCGAAACTCG | 59.909 | 50.000 | 0.00 | 0.00 | 42.10 | 4.18 |
597 | 731 | 2.094659 | CGTCGAAACTCGCATGCCT | 61.095 | 57.895 | 13.15 | 0.00 | 40.21 | 4.75 |
598 | 732 | 0.800683 | CGTCGAAACTCGCATGCCTA | 60.801 | 55.000 | 13.15 | 0.00 | 40.21 | 3.93 |
604 | 738 | 2.963854 | CTCGCATGCCTACCGCTG | 60.964 | 66.667 | 13.15 | 0.00 | 38.78 | 5.18 |
607 | 741 | 4.864334 | GCATGCCTACCGCTGCCT | 62.864 | 66.667 | 6.36 | 0.00 | 36.32 | 4.75 |
608 | 742 | 2.898840 | CATGCCTACCGCTGCCTG | 60.899 | 66.667 | 0.00 | 0.00 | 38.78 | 4.85 |
609 | 743 | 4.181010 | ATGCCTACCGCTGCCTGG | 62.181 | 66.667 | 0.00 | 0.00 | 38.78 | 4.45 |
611 | 745 | 4.840005 | GCCTACCGCTGCCTGGAC | 62.840 | 72.222 | 0.00 | 0.00 | 0.00 | 4.02 |
612 | 746 | 3.390521 | CCTACCGCTGCCTGGACA | 61.391 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
613 | 747 | 2.125512 | CTACCGCTGCCTGGACAC | 60.126 | 66.667 | 0.00 | 0.00 | 0.00 | 3.67 |
614 | 748 | 2.920384 | TACCGCTGCCTGGACACA | 60.920 | 61.111 | 0.00 | 0.00 | 0.00 | 3.72 |
615 | 749 | 3.234630 | TACCGCTGCCTGGACACAC | 62.235 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
616 | 750 | 4.320456 | CCGCTGCCTGGACACACT | 62.320 | 66.667 | 0.00 | 0.00 | 0.00 | 3.55 |
617 | 751 | 2.740055 | CGCTGCCTGGACACACTC | 60.740 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
647 | 781 | 2.182030 | GGACGAGCCAAGAGACCG | 59.818 | 66.667 | 0.00 | 0.00 | 36.34 | 4.79 |
688 | 822 | 0.107165 | GAGGGCGCCTTTTCTATGGT | 60.107 | 55.000 | 28.56 | 0.00 | 31.76 | 3.55 |
698 | 832 | 1.448985 | TTTCTATGGTGCCACGCTTC | 58.551 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
701 | 835 | 0.729116 | CTATGGTGCCACGCTTCTTG | 59.271 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
733 | 867 | 3.065655 | CAAGTGACTTCTTGAGGCTGAG | 58.934 | 50.000 | 0.00 | 0.00 | 45.11 | 3.35 |
734 | 868 | 2.324541 | AGTGACTTCTTGAGGCTGAGT | 58.675 | 47.619 | 0.00 | 0.00 | 33.09 | 3.41 |
735 | 869 | 2.298729 | AGTGACTTCTTGAGGCTGAGTC | 59.701 | 50.000 | 0.00 | 0.00 | 33.09 | 3.36 |
753 | 887 | 0.616111 | TCAAGAGACAGGGAGAGGGC | 60.616 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
819 | 988 | 2.992124 | TGAAATTTCGCCCGAGGATA | 57.008 | 45.000 | 13.34 | 0.00 | 0.00 | 2.59 |
878 | 1047 | 0.942410 | GCCACTGTTTCACGTCGCTA | 60.942 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
914 | 1089 | 7.641760 | ACATACATATCAACATACGTACACGA | 58.358 | 34.615 | 9.04 | 0.00 | 43.02 | 4.35 |
1453 | 6949 | 2.388232 | CGTAACGCACCAGCCTTCC | 61.388 | 63.158 | 0.00 | 0.00 | 37.52 | 3.46 |
1481 | 7334 | 5.163258 | GCCCAGACACCTAGTAGTACTAGTA | 60.163 | 48.000 | 27.82 | 15.22 | 45.12 | 1.82 |
1557 | 8644 | 2.282040 | GCACTCAGCAGGCCACTT | 60.282 | 61.111 | 5.01 | 0.00 | 44.79 | 3.16 |
1689 | 8970 | 2.267324 | GGCTCTGACCTCTGTGGC | 59.733 | 66.667 | 0.00 | 0.00 | 40.22 | 5.01 |
1691 | 8972 | 1.079266 | GCTCTGACCTCTGTGGCTG | 60.079 | 63.158 | 0.00 | 0.00 | 40.22 | 4.85 |
1692 | 8973 | 1.825281 | GCTCTGACCTCTGTGGCTGT | 61.825 | 60.000 | 0.00 | 0.00 | 40.22 | 4.40 |
1693 | 8974 | 0.037512 | CTCTGACCTCTGTGGCTGTG | 60.038 | 60.000 | 0.00 | 0.00 | 40.22 | 3.66 |
1694 | 8975 | 0.760567 | TCTGACCTCTGTGGCTGTGT | 60.761 | 55.000 | 0.00 | 0.00 | 40.22 | 3.72 |
1722 | 9004 | 4.247380 | GGCCTCCATCCTCGCTGG | 62.247 | 72.222 | 0.00 | 0.00 | 34.93 | 4.85 |
1822 | 9111 | 1.072173 | AGTGGCAGGGCAAAAATTTCC | 59.928 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
1860 | 9154 | 2.409975 | TGTTCGGAAGTTAGGAAAGCG | 58.590 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
1873 | 9167 | 2.010497 | GGAAAGCGGAAAGGATCTGTC | 58.990 | 52.381 | 0.00 | 0.00 | 36.73 | 3.51 |
1918 | 9489 | 8.293867 | CCTCTAGAATATAGTTCCTCACTTTCG | 58.706 | 40.741 | 0.00 | 0.00 | 36.88 | 3.46 |
1961 | 9547 | 5.919141 | ACTCTGATGTGAAACTACAACGTAC | 59.081 | 40.000 | 0.00 | 0.00 | 38.04 | 3.67 |
1962 | 9548 | 6.080648 | TCTGATGTGAAACTACAACGTACT | 57.919 | 37.500 | 0.00 | 0.00 | 38.04 | 2.73 |
1963 | 9549 | 6.147581 | TCTGATGTGAAACTACAACGTACTC | 58.852 | 40.000 | 0.00 | 0.00 | 38.04 | 2.59 |
1964 | 9550 | 5.834169 | TGATGTGAAACTACAACGTACTCA | 58.166 | 37.500 | 0.00 | 0.00 | 38.04 | 3.41 |
1965 | 9551 | 5.688621 | TGATGTGAAACTACAACGTACTCAC | 59.311 | 40.000 | 0.00 | 0.00 | 38.04 | 3.51 |
1966 | 9552 | 5.252969 | TGTGAAACTACAACGTACTCACT | 57.747 | 39.130 | 0.00 | 0.00 | 38.04 | 3.41 |
1967 | 9553 | 6.375945 | TGTGAAACTACAACGTACTCACTA | 57.624 | 37.500 | 0.00 | 0.00 | 38.04 | 2.74 |
1968 | 9554 | 6.432936 | TGTGAAACTACAACGTACTCACTAG | 58.567 | 40.000 | 0.00 | 0.00 | 38.04 | 2.57 |
1969 | 9555 | 5.341727 | GTGAAACTACAACGTACTCACTAGC | 59.658 | 44.000 | 0.00 | 0.00 | 31.89 | 3.42 |
1970 | 9556 | 4.431661 | AACTACAACGTACTCACTAGCC | 57.568 | 45.455 | 0.00 | 0.00 | 0.00 | 3.93 |
1971 | 9557 | 2.417933 | ACTACAACGTACTCACTAGCCG | 59.582 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
1972 | 9558 | 0.109412 | ACAACGTACTCACTAGCCGC | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
1973 | 9559 | 0.170561 | CAACGTACTCACTAGCCGCT | 59.829 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
1974 | 9560 | 1.399440 | CAACGTACTCACTAGCCGCTA | 59.601 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
1975 | 9561 | 1.297664 | ACGTACTCACTAGCCGCTAG | 58.702 | 55.000 | 23.33 | 23.33 | 39.72 | 3.42 |
1976 | 9562 | 0.041135 | CGTACTCACTAGCCGCTAGC | 60.041 | 60.000 | 24.59 | 4.06 | 37.57 | 3.42 |
1985 | 9571 | 2.482374 | GCCGCTAGCTGCAGTTTG | 59.518 | 61.111 | 24.24 | 11.79 | 43.06 | 2.93 |
1986 | 9572 | 2.034879 | GCCGCTAGCTGCAGTTTGA | 61.035 | 57.895 | 24.24 | 0.00 | 43.06 | 2.69 |
1987 | 9573 | 1.975363 | GCCGCTAGCTGCAGTTTGAG | 61.975 | 60.000 | 24.24 | 12.05 | 43.06 | 3.02 |
1988 | 9574 | 0.671781 | CCGCTAGCTGCAGTTTGAGT | 60.672 | 55.000 | 16.64 | 0.00 | 43.06 | 3.41 |
1989 | 9575 | 1.404181 | CCGCTAGCTGCAGTTTGAGTA | 60.404 | 52.381 | 16.64 | 0.00 | 43.06 | 2.59 |
1990 | 9576 | 1.923204 | CGCTAGCTGCAGTTTGAGTAG | 59.077 | 52.381 | 16.64 | 4.18 | 43.06 | 2.57 |
1991 | 9577 | 2.672478 | CGCTAGCTGCAGTTTGAGTAGT | 60.672 | 50.000 | 16.64 | 0.00 | 43.06 | 2.73 |
2117 | 9708 | 3.939837 | CTTGGCTCGGCTCGCTCAA | 62.940 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
2207 | 9823 | 1.966762 | CCAACTGCCGCCAATCTTT | 59.033 | 52.632 | 0.00 | 0.00 | 0.00 | 2.52 |
2209 | 9825 | 1.135402 | CCAACTGCCGCCAATCTTTAC | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
2256 | 9872 | 9.656323 | AACCTCTGTATATAGTCCACAATCTTA | 57.344 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
2341 | 9958 | 8.800370 | TGAAACATCCAGCAGTATATTGTTTA | 57.200 | 30.769 | 0.00 | 0.00 | 36.33 | 2.01 |
2414 | 10031 | 8.789881 | TCTACAAAAATTGTAACAATGGAACG | 57.210 | 30.769 | 4.68 | 0.00 | 44.80 | 3.95 |
2511 | 10130 | 8.649841 | CAAAACATCAAATATTGACAGCGAAAT | 58.350 | 29.630 | 0.00 | 0.00 | 43.48 | 2.17 |
2558 | 10177 | 8.459635 | CAAACTCATCTGAATCTGATTTGTCAT | 58.540 | 33.333 | 4.11 | 0.00 | 0.00 | 3.06 |
2680 | 10299 | 3.857010 | GCTCCATTGCCTAACACACAAAC | 60.857 | 47.826 | 0.00 | 0.00 | 0.00 | 2.93 |
2685 | 10304 | 3.773860 | TGCCTAACACACAAACACAAG | 57.226 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
2691 | 10310 | 4.782019 | AACACACAAACACAAGACACAT | 57.218 | 36.364 | 0.00 | 0.00 | 0.00 | 3.21 |
2922 | 10639 | 6.976349 | CACATACATGAGCTTGCACAAATATT | 59.024 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
2970 | 10687 | 3.689872 | TGTAGCCTCCCTCTCATAGTT | 57.310 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
3035 | 10752 | 3.967024 | TGGTGGGGTCAGGGGGAT | 61.967 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
3347 | 11086 | 8.629158 | CGAAAATTTCCATCTACCAATCCATTA | 58.371 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
3409 | 11148 | 5.261216 | GCTCTTCTAGATCTAGCCCTACAT | 58.739 | 45.833 | 22.81 | 0.00 | 33.32 | 2.29 |
3575 | 11353 | 3.300239 | TCCATTGATCCATCACATGCA | 57.700 | 42.857 | 0.00 | 0.00 | 36.36 | 3.96 |
3599 | 11377 | 7.629652 | GCATACTACTAAAGTTCAGAGAGCTGT | 60.630 | 40.741 | 0.00 | 0.00 | 40.17 | 4.40 |
3751 | 11536 | 3.049674 | ATTGCTGTCGGTGTGGCG | 61.050 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
3752 | 11537 | 3.529341 | ATTGCTGTCGGTGTGGCGA | 62.529 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
3753 | 11538 | 4.662961 | TGCTGTCGGTGTGGCGAG | 62.663 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
3755 | 11540 | 3.680786 | CTGTCGGTGTGGCGAGGA | 61.681 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
3756 | 11541 | 3.220999 | CTGTCGGTGTGGCGAGGAA | 62.221 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
3757 | 11542 | 2.029964 | GTCGGTGTGGCGAGGAAA | 59.970 | 61.111 | 0.00 | 0.00 | 0.00 | 3.13 |
3758 | 11543 | 2.029964 | TCGGTGTGGCGAGGAAAC | 59.970 | 61.111 | 0.00 | 0.00 | 0.00 | 2.78 |
3759 | 11544 | 2.280524 | CGGTGTGGCGAGGAAACA | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 2.83 |
3760 | 11545 | 2.604174 | CGGTGTGGCGAGGAAACAC | 61.604 | 63.158 | 0.00 | 0.00 | 42.75 | 3.32 |
3761 | 11546 | 2.604174 | GGTGTGGCGAGGAAACACG | 61.604 | 63.158 | 0.00 | 0.00 | 44.08 | 4.49 |
3762 | 11547 | 2.280524 | TGTGGCGAGGAAACACGG | 60.281 | 61.111 | 0.00 | 0.00 | 44.99 | 4.94 |
3766 | 11551 | 2.785258 | GCGAGGAAACACGGCATC | 59.215 | 61.111 | 0.00 | 0.00 | 44.99 | 3.91 |
3767 | 11552 | 3.081133 | CGAGGAAACACGGCATCG | 58.919 | 61.111 | 0.00 | 0.00 | 40.94 | 3.84 |
3768 | 11553 | 2.785258 | GAGGAAACACGGCATCGC | 59.215 | 61.111 | 0.00 | 0.00 | 40.63 | 4.58 |
3769 | 11554 | 1.741770 | GAGGAAACACGGCATCGCT | 60.742 | 57.895 | 0.00 | 0.00 | 40.63 | 4.93 |
3770 | 11555 | 1.696832 | GAGGAAACACGGCATCGCTC | 61.697 | 60.000 | 0.00 | 0.00 | 40.63 | 5.03 |
3771 | 11556 | 2.032634 | GGAAACACGGCATCGCTCA | 61.033 | 57.895 | 0.00 | 0.00 | 40.63 | 4.26 |
3772 | 11557 | 1.369091 | GGAAACACGGCATCGCTCAT | 61.369 | 55.000 | 0.00 | 0.00 | 40.63 | 2.90 |
3773 | 11558 | 0.026803 | GAAACACGGCATCGCTCATC | 59.973 | 55.000 | 0.00 | 0.00 | 40.63 | 2.92 |
3774 | 11559 | 1.695893 | AAACACGGCATCGCTCATCG | 61.696 | 55.000 | 0.00 | 0.00 | 40.63 | 3.84 |
3775 | 11560 | 3.993234 | CACGGCATCGCTCATCGC | 61.993 | 66.667 | 0.00 | 0.00 | 40.63 | 4.58 |
3778 | 11563 | 2.667536 | GGCATCGCTCATCGCCAT | 60.668 | 61.111 | 0.00 | 0.00 | 44.25 | 4.40 |
3779 | 11564 | 2.554775 | GCATCGCTCATCGCCATG | 59.445 | 61.111 | 0.00 | 0.00 | 39.82 | 3.66 |
3780 | 11565 | 2.962827 | GCATCGCTCATCGCCATGG | 61.963 | 63.158 | 7.63 | 7.63 | 37.65 | 3.66 |
3781 | 11566 | 1.301165 | CATCGCTCATCGCCATGGA | 60.301 | 57.895 | 18.40 | 0.00 | 34.12 | 3.41 |
3782 | 11567 | 0.672711 | CATCGCTCATCGCCATGGAT | 60.673 | 55.000 | 18.40 | 0.00 | 34.12 | 3.41 |
3783 | 11568 | 0.390866 | ATCGCTCATCGCCATGGATC | 60.391 | 55.000 | 18.40 | 0.00 | 38.27 | 3.36 |
3784 | 11569 | 2.031516 | CGCTCATCGCCATGGATCC | 61.032 | 63.158 | 18.40 | 4.20 | 34.21 | 3.36 |
3785 | 11570 | 1.071987 | GCTCATCGCCATGGATCCA | 59.928 | 57.895 | 18.88 | 18.88 | 0.00 | 3.41 |
3786 | 11571 | 0.954449 | GCTCATCGCCATGGATCCAG | 60.954 | 60.000 | 21.33 | 8.69 | 0.00 | 3.86 |
3787 | 11572 | 0.683412 | CTCATCGCCATGGATCCAGA | 59.317 | 55.000 | 21.33 | 12.19 | 0.00 | 3.86 |
3788 | 11573 | 1.278413 | CTCATCGCCATGGATCCAGAT | 59.722 | 52.381 | 21.33 | 14.01 | 0.00 | 2.90 |
3789 | 11574 | 1.701292 | TCATCGCCATGGATCCAGATT | 59.299 | 47.619 | 21.33 | 0.00 | 0.00 | 2.40 |
3790 | 11575 | 2.107031 | TCATCGCCATGGATCCAGATTT | 59.893 | 45.455 | 21.33 | 0.00 | 0.00 | 2.17 |
3791 | 11576 | 1.971481 | TCGCCATGGATCCAGATTTG | 58.029 | 50.000 | 21.33 | 13.14 | 0.00 | 2.32 |
3792 | 11577 | 0.313043 | CGCCATGGATCCAGATTTGC | 59.687 | 55.000 | 21.33 | 15.49 | 0.00 | 3.68 |
3793 | 11578 | 0.313043 | GCCATGGATCCAGATTTGCG | 59.687 | 55.000 | 21.33 | 8.54 | 0.00 | 4.85 |
3794 | 11579 | 0.956633 | CCATGGATCCAGATTTGCGG | 59.043 | 55.000 | 21.33 | 7.62 | 0.00 | 5.69 |
3795 | 11580 | 1.683943 | CATGGATCCAGATTTGCGGT | 58.316 | 50.000 | 21.33 | 0.00 | 0.00 | 5.68 |
3796 | 11581 | 1.335810 | CATGGATCCAGATTTGCGGTG | 59.664 | 52.381 | 21.33 | 6.19 | 0.00 | 4.94 |
3797 | 11582 | 0.327924 | TGGATCCAGATTTGCGGTGT | 59.672 | 50.000 | 11.44 | 0.00 | 0.00 | 4.16 |
3798 | 11583 | 0.734889 | GGATCCAGATTTGCGGTGTG | 59.265 | 55.000 | 6.95 | 0.00 | 0.00 | 3.82 |
3799 | 11584 | 0.734889 | GATCCAGATTTGCGGTGTGG | 59.265 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3800 | 11585 | 1.315257 | ATCCAGATTTGCGGTGTGGC | 61.315 | 55.000 | 0.00 | 0.00 | 30.52 | 5.01 |
3890 | 11675 | 1.271054 | GCAGAGCAGTGAAAGGGAGAA | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
3900 | 11685 | 3.006003 | GTGAAAGGGAGAAACGAGAGACT | 59.994 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
3915 | 11700 | 2.281070 | ACTGGCTGTGGTTGCTCG | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 5.03 |
3917 | 11702 | 2.591429 | TGGCTGTGGTTGCTCGTG | 60.591 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
3999 | 11784 | 2.032071 | CTGGACCGGCCGAAACTT | 59.968 | 61.111 | 30.73 | 4.57 | 40.66 | 2.66 |
4000 | 11785 | 2.281208 | TGGACCGGCCGAAACTTG | 60.281 | 61.111 | 30.73 | 11.56 | 40.66 | 3.16 |
4002 | 11787 | 2.031465 | GACCGGCCGAAACTTGGA | 59.969 | 61.111 | 30.73 | 0.00 | 0.00 | 3.53 |
4013 | 11798 | 0.391263 | AAACTTGGATCGGCTCGGTC | 60.391 | 55.000 | 0.00 | 0.00 | 36.12 | 4.79 |
4020 | 11805 | 3.426117 | ATCGGCTCGGTCGCGAAAT | 62.426 | 57.895 | 12.06 | 0.00 | 0.00 | 2.17 |
4084 | 11869 | 2.123854 | AGCTGTATCGGGCCGAGA | 60.124 | 61.111 | 33.82 | 27.88 | 39.91 | 4.04 |
4097 | 11882 | 1.299773 | CCGAGATGGAGCGAGCTTC | 60.300 | 63.158 | 0.00 | 0.00 | 42.00 | 3.86 |
4136 | 11921 | 0.656785 | GCTCGTACGTCCAGTCCTAG | 59.343 | 60.000 | 16.05 | 2.75 | 0.00 | 3.02 |
4137 | 11922 | 0.656785 | CTCGTACGTCCAGTCCTAGC | 59.343 | 60.000 | 16.05 | 0.00 | 0.00 | 3.42 |
4138 | 11923 | 0.251354 | TCGTACGTCCAGTCCTAGCT | 59.749 | 55.000 | 16.05 | 0.00 | 0.00 | 3.32 |
4163 | 11948 | 3.134804 | AGCCTCATTATAGCGGTTTGAGT | 59.865 | 43.478 | 0.00 | 0.00 | 33.56 | 3.41 |
4165 | 11950 | 5.054477 | GCCTCATTATAGCGGTTTGAGTAA | 58.946 | 41.667 | 0.00 | 0.00 | 33.56 | 2.24 |
4210 | 11995 | 9.056005 | GCTATAAGATTCATGTACAATTGTCCA | 57.944 | 33.333 | 15.85 | 10.79 | 0.00 | 4.02 |
4222 | 12007 | 7.767261 | TGTACAATTGTCCAATAAGGTTATGC | 58.233 | 34.615 | 15.85 | 0.00 | 39.02 | 3.14 |
4242 | 12027 | 4.089361 | TGCAATAGCCAGCTATAGCTAGA | 58.911 | 43.478 | 26.45 | 12.37 | 45.30 | 2.43 |
4244 | 12029 | 5.893824 | TGCAATAGCCAGCTATAGCTAGATA | 59.106 | 40.000 | 26.45 | 22.03 | 45.30 | 1.98 |
4265 | 12050 | 2.698855 | TTTGGAGGACTGCTGCTATC | 57.301 | 50.000 | 0.00 | 0.00 | 0.00 | 2.08 |
4266 | 12051 | 1.871418 | TTGGAGGACTGCTGCTATCT | 58.129 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4267 | 12052 | 1.407936 | TGGAGGACTGCTGCTATCTC | 58.592 | 55.000 | 0.00 | 3.08 | 0.00 | 2.75 |
4295 | 12081 | 6.734137 | CATAGCCCGCTATTTAAAACAATGA | 58.266 | 36.000 | 6.48 | 0.00 | 37.16 | 2.57 |
4355 | 12141 | 7.550196 | CCTATTTGCTTGCTTAATTGTTCCAAT | 59.450 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
4471 | 12289 | 1.130678 | TGTCACACACCTGGGCCATA | 61.131 | 55.000 | 6.72 | 0.00 | 0.00 | 2.74 |
4911 | 12761 | 4.755123 | ACTCTGACCCACTTATTTTTCACG | 59.245 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
4920 | 12770 | 6.799925 | CCCACTTATTTTTCACGTATGTTGAC | 59.200 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
4930 | 12805 | 7.821595 | TTCACGTATGTTGACTTATTACCTG | 57.178 | 36.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4952 | 12830 | 8.207545 | ACCTGAATACCTTTTAATCTCTGCTAG | 58.792 | 37.037 | 0.00 | 0.00 | 0.00 | 3.42 |
5019 | 12900 | 1.820519 | ACCATAACGGCTGAACGAGTA | 59.179 | 47.619 | 0.00 | 0.00 | 39.03 | 2.59 |
5021 | 12902 | 3.255725 | CCATAACGGCTGAACGAGTAAA | 58.744 | 45.455 | 0.00 | 0.00 | 37.61 | 2.01 |
5193 | 13077 | 3.425359 | GCTTTGTCGTGTGGATGATTGAG | 60.425 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
5274 | 13158 | 7.110155 | TCTACTTTGTTTTCTCCACTTTGACT | 58.890 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
5280 | 16358 | 6.394809 | TGTTTTCTCCACTTTGACTTTTTCC | 58.605 | 36.000 | 0.00 | 0.00 | 0.00 | 3.13 |
5512 | 16612 | 2.889512 | TCTGACTACAAAGAGGCTCCA | 58.110 | 47.619 | 11.71 | 0.00 | 0.00 | 3.86 |
5536 | 16636 | 3.433615 | CCTTCGGTGACAGATTTTGAGAC | 59.566 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
5684 | 16784 | 4.524328 | GCTTTGAAGAAGGGATCCAAGAAA | 59.476 | 41.667 | 15.23 | 1.65 | 0.00 | 2.52 |
5690 | 16790 | 2.668850 | AGGGATCCAAGAAAGGAGGA | 57.331 | 50.000 | 15.23 | 0.00 | 41.90 | 3.71 |
5741 | 16841 | 7.984617 | CCCTATTTAACTTCTTTCCTCTCTGAG | 59.015 | 40.741 | 0.00 | 0.00 | 0.00 | 3.35 |
5862 | 16969 | 1.008875 | TGTTCTTGCAGCGCTACGAG | 61.009 | 55.000 | 17.59 | 17.59 | 0.00 | 4.18 |
5869 | 16976 | 1.483424 | GCAGCGCTACGAGACAATCC | 61.483 | 60.000 | 10.99 | 0.00 | 0.00 | 3.01 |
5913 | 17027 | 4.745125 | ACATCGTATTCTTATGTTCAGGCG | 59.255 | 41.667 | 0.00 | 0.00 | 29.68 | 5.52 |
6105 | 17219 | 3.259374 | TCTCTGGTCTCTTTGTCATCACC | 59.741 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
6291 | 17411 | 2.108250 | ACAAACCTTCCATGTAGCTGGT | 59.892 | 45.455 | 0.00 | 0.00 | 37.57 | 4.00 |
6296 | 17416 | 3.117888 | ACCTTCCATGTAGCTGGTATTGG | 60.118 | 47.826 | 0.00 | 10.74 | 37.57 | 3.16 |
6363 | 17483 | 2.353958 | CCTGACCCAGTGCAGCAT | 59.646 | 61.111 | 0.00 | 0.00 | 0.00 | 3.79 |
6385 | 17508 | 1.152902 | GGCATGCATGGTGGCTCTA | 60.153 | 57.895 | 27.34 | 0.00 | 38.91 | 2.43 |
6392 | 17515 | 1.427809 | CATGGTGGCTCTATCCCTGA | 58.572 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
6724 | 17883 | 2.112087 | TTTGCACTACAGCCGGCA | 59.888 | 55.556 | 31.54 | 7.07 | 0.00 | 5.69 |
6783 | 17942 | 7.945109 | ACACTTCCCTCTCTTAATTAAAAAGCT | 59.055 | 33.333 | 0.00 | 0.00 | 0.00 | 3.74 |
6806 | 17965 | 2.446802 | GGCTCCTCCCCCTACTGG | 60.447 | 72.222 | 0.00 | 0.00 | 0.00 | 4.00 |
6812 | 17971 | 0.935194 | CCTCCCCCTACTGGTCTACT | 59.065 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6850 | 18009 | 7.414540 | GCACTATACAACCCTGAATCTTTGAAG | 60.415 | 40.741 | 0.00 | 0.00 | 0.00 | 3.02 |
6863 | 18022 | 3.820557 | TCTTTGAAGTGGGGAAGTTCAG | 58.179 | 45.455 | 5.01 | 0.00 | 46.47 | 3.02 |
6876 | 18035 | 4.505039 | GGGAAGTTCAGGCTTTCTAGAACA | 60.505 | 45.833 | 4.18 | 0.00 | 42.01 | 3.18 |
6881 | 18040 | 1.936547 | CAGGCTTTCTAGAACATCGCC | 59.063 | 52.381 | 19.17 | 19.17 | 36.36 | 5.54 |
6890 | 18049 | 2.225068 | AGAACATCGCCTGTAATCCG | 57.775 | 50.000 | 0.00 | 0.00 | 36.98 | 4.18 |
6894 | 18053 | 1.217882 | CATCGCCTGTAATCCGAACC | 58.782 | 55.000 | 0.00 | 0.00 | 34.42 | 3.62 |
6954 | 18113 | 6.845302 | TGTGTGCTAAGAATGCTAAGAATTG | 58.155 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
7071 | 18231 | 6.058183 | GCATTCCACACCTTCAGTTAGATAT | 58.942 | 40.000 | 0.00 | 0.00 | 0.00 | 1.63 |
7104 | 18264 | 2.689553 | TGTGCACACTTGTCTCTTCA | 57.310 | 45.000 | 17.42 | 0.00 | 0.00 | 3.02 |
7110 | 18270 | 4.060900 | GCACACTTGTCTCTTCAGATTGA | 58.939 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
7135 | 18295 | 8.816640 | ACATTACTTATGTTGCCTTTTTGAAG | 57.183 | 30.769 | 0.00 | 0.00 | 45.19 | 3.02 |
7136 | 18296 | 7.384932 | ACATTACTTATGTTGCCTTTTTGAAGC | 59.615 | 33.333 | 0.00 | 0.00 | 45.19 | 3.86 |
7137 | 18297 | 4.298332 | ACTTATGTTGCCTTTTTGAAGCG | 58.702 | 39.130 | 0.00 | 0.00 | 0.00 | 4.68 |
7138 | 18298 | 4.037446 | ACTTATGTTGCCTTTTTGAAGCGA | 59.963 | 37.500 | 0.00 | 0.00 | 0.00 | 4.93 |
7139 | 18299 | 2.202295 | TGTTGCCTTTTTGAAGCGAC | 57.798 | 45.000 | 0.00 | 0.00 | 40.63 | 5.19 |
7166 | 18326 | 2.990740 | TGGTTCCCCAGCTTGTTTAT | 57.009 | 45.000 | 0.00 | 0.00 | 35.17 | 1.40 |
7168 | 18328 | 3.963129 | TGGTTCCCCAGCTTGTTTATAG | 58.037 | 45.455 | 0.00 | 0.00 | 35.17 | 1.31 |
7169 | 18329 | 3.589735 | TGGTTCCCCAGCTTGTTTATAGA | 59.410 | 43.478 | 0.00 | 0.00 | 35.17 | 1.98 |
7170 | 18330 | 4.229582 | TGGTTCCCCAGCTTGTTTATAGAT | 59.770 | 41.667 | 0.00 | 0.00 | 35.17 | 1.98 |
7171 | 18331 | 4.580580 | GGTTCCCCAGCTTGTTTATAGATG | 59.419 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
7172 | 18332 | 5.193679 | GTTCCCCAGCTTGTTTATAGATGT | 58.806 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
7174 | 18334 | 5.192927 | TCCCCAGCTTGTTTATAGATGTTG | 58.807 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
7175 | 18335 | 5.045213 | TCCCCAGCTTGTTTATAGATGTTGA | 60.045 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
7176 | 18336 | 5.829924 | CCCCAGCTTGTTTATAGATGTTGAT | 59.170 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
7177 | 18337 | 6.238842 | CCCCAGCTTGTTTATAGATGTTGATG | 60.239 | 42.308 | 0.00 | 0.00 | 0.00 | 3.07 |
7178 | 18338 | 6.543465 | CCCAGCTTGTTTATAGATGTTGATGA | 59.457 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
7179 | 18339 | 7.067372 | CCCAGCTTGTTTATAGATGTTGATGAA | 59.933 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
7180 | 18340 | 8.627403 | CCAGCTTGTTTATAGATGTTGATGAAT | 58.373 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
7181 | 18341 | 9.661187 | CAGCTTGTTTATAGATGTTGATGAATC | 57.339 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
7182 | 18342 | 9.399797 | AGCTTGTTTATAGATGTTGATGAATCA | 57.600 | 29.630 | 0.00 | 0.00 | 34.44 | 2.57 |
7183 | 18343 | 9.661187 | GCTTGTTTATAGATGTTGATGAATCAG | 57.339 | 33.333 | 0.00 | 0.00 | 38.19 | 2.90 |
7186 | 18346 | 9.889128 | TGTTTATAGATGTTGATGAATCAGACA | 57.111 | 29.630 | 9.29 | 9.29 | 38.19 | 3.41 |
7190 | 18350 | 6.506500 | AGATGTTGATGAATCAGACAAACC | 57.493 | 37.500 | 7.09 | 0.00 | 38.19 | 3.27 |
7191 | 18351 | 6.005823 | AGATGTTGATGAATCAGACAAACCA | 58.994 | 36.000 | 7.09 | 4.00 | 38.19 | 3.67 |
7192 | 18352 | 6.662234 | AGATGTTGATGAATCAGACAAACCAT | 59.338 | 34.615 | 7.09 | 7.56 | 38.19 | 3.55 |
7193 | 18353 | 6.016213 | TGTTGATGAATCAGACAAACCATG | 57.984 | 37.500 | 7.09 | 0.00 | 38.19 | 3.66 |
7194 | 18354 | 4.707030 | TGATGAATCAGACAAACCATGC | 57.293 | 40.909 | 0.00 | 0.00 | 32.11 | 4.06 |
7195 | 18355 | 4.080687 | TGATGAATCAGACAAACCATGCA | 58.919 | 39.130 | 0.00 | 0.00 | 32.11 | 3.96 |
7196 | 18356 | 4.707934 | TGATGAATCAGACAAACCATGCAT | 59.292 | 37.500 | 0.00 | 0.00 | 32.11 | 3.96 |
7197 | 18357 | 4.443913 | TGAATCAGACAAACCATGCATG | 57.556 | 40.909 | 20.19 | 20.19 | 0.00 | 4.06 |
7198 | 18358 | 8.294120 | TGATGAATCAGACAAACCATGCATGG | 62.294 | 42.308 | 38.53 | 38.53 | 41.76 | 3.66 |
7207 | 18367 | 3.269578 | CCATGCATGGTCTTGGTGA | 57.730 | 52.632 | 33.68 | 0.00 | 43.05 | 4.02 |
7208 | 18368 | 1.548081 | CCATGCATGGTCTTGGTGAA | 58.452 | 50.000 | 33.68 | 0.00 | 43.05 | 3.18 |
7209 | 18369 | 1.475280 | CCATGCATGGTCTTGGTGAAG | 59.525 | 52.381 | 33.68 | 7.13 | 43.05 | 3.02 |
7210 | 18370 | 2.439409 | CATGCATGGTCTTGGTGAAGA | 58.561 | 47.619 | 19.40 | 0.00 | 35.75 | 2.87 |
7211 | 18371 | 2.655090 | TGCATGGTCTTGGTGAAGAA | 57.345 | 45.000 | 0.00 | 0.00 | 40.00 | 2.52 |
7212 | 18372 | 2.942804 | TGCATGGTCTTGGTGAAGAAA | 58.057 | 42.857 | 0.00 | 0.00 | 40.00 | 2.52 |
7213 | 18373 | 3.295093 | TGCATGGTCTTGGTGAAGAAAA | 58.705 | 40.909 | 0.00 | 0.00 | 40.00 | 2.29 |
7214 | 18374 | 3.896888 | TGCATGGTCTTGGTGAAGAAAAT | 59.103 | 39.130 | 0.00 | 0.00 | 40.00 | 1.82 |
7215 | 18375 | 4.240096 | GCATGGTCTTGGTGAAGAAAATG | 58.760 | 43.478 | 0.00 | 0.00 | 40.00 | 2.32 |
7216 | 18376 | 4.022068 | GCATGGTCTTGGTGAAGAAAATGA | 60.022 | 41.667 | 0.00 | 0.00 | 40.00 | 2.57 |
7217 | 18377 | 5.509501 | GCATGGTCTTGGTGAAGAAAATGAA | 60.510 | 40.000 | 0.00 | 0.00 | 40.00 | 2.57 |
7218 | 18378 | 6.514947 | CATGGTCTTGGTGAAGAAAATGAAA | 58.485 | 36.000 | 0.00 | 0.00 | 40.00 | 2.69 |
7219 | 18379 | 6.537453 | TGGTCTTGGTGAAGAAAATGAAAA | 57.463 | 33.333 | 0.00 | 0.00 | 40.00 | 2.29 |
7220 | 18380 | 7.123355 | TGGTCTTGGTGAAGAAAATGAAAAT | 57.877 | 32.000 | 0.00 | 0.00 | 40.00 | 1.82 |
7221 | 18381 | 7.209475 | TGGTCTTGGTGAAGAAAATGAAAATC | 58.791 | 34.615 | 0.00 | 0.00 | 40.00 | 2.17 |
7222 | 18382 | 7.069826 | TGGTCTTGGTGAAGAAAATGAAAATCT | 59.930 | 33.333 | 0.00 | 0.00 | 40.00 | 2.40 |
7223 | 18383 | 7.596621 | GGTCTTGGTGAAGAAAATGAAAATCTC | 59.403 | 37.037 | 0.00 | 0.00 | 40.00 | 2.75 |
7224 | 18384 | 8.137437 | GTCTTGGTGAAGAAAATGAAAATCTCA | 58.863 | 33.333 | 0.00 | 0.00 | 40.00 | 3.27 |
7225 | 18385 | 8.694540 | TCTTGGTGAAGAAAATGAAAATCTCAA | 58.305 | 29.630 | 0.00 | 0.00 | 34.79 | 3.02 |
7226 | 18386 | 9.485206 | CTTGGTGAAGAAAATGAAAATCTCAAT | 57.515 | 29.630 | 0.00 | 0.00 | 37.67 | 2.57 |
7227 | 18387 | 9.835389 | TTGGTGAAGAAAATGAAAATCTCAATT | 57.165 | 25.926 | 0.00 | 0.00 | 37.67 | 2.32 |
7228 | 18388 | 9.835389 | TGGTGAAGAAAATGAAAATCTCAATTT | 57.165 | 25.926 | 0.00 | 0.00 | 39.41 | 1.82 |
7247 | 18407 | 9.903682 | CTCAATTTTCAGTTGAAACATATCAGT | 57.096 | 29.630 | 6.79 | 0.00 | 43.01 | 3.41 |
7251 | 18411 | 6.961359 | TTCAGTTGAAACATATCAGTACCG | 57.039 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
7252 | 18412 | 6.275494 | TCAGTTGAAACATATCAGTACCGA | 57.725 | 37.500 | 0.00 | 0.00 | 0.00 | 4.69 |
7253 | 18413 | 6.693466 | TCAGTTGAAACATATCAGTACCGAA | 58.307 | 36.000 | 0.00 | 0.00 | 0.00 | 4.30 |
7294 | 18454 | 5.458041 | ACATGGTCTTGGTGAAGAAAATG | 57.542 | 39.130 | 0.00 | 0.00 | 40.00 | 2.32 |
7295 | 18455 | 5.139727 | ACATGGTCTTGGTGAAGAAAATGA | 58.860 | 37.500 | 0.00 | 0.00 | 40.00 | 2.57 |
7296 | 18456 | 5.598005 | ACATGGTCTTGGTGAAGAAAATGAA | 59.402 | 36.000 | 0.00 | 0.00 | 40.00 | 2.57 |
7297 | 18457 | 6.098124 | ACATGGTCTTGGTGAAGAAAATGAAA | 59.902 | 34.615 | 0.00 | 0.00 | 40.00 | 2.69 |
7298 | 18458 | 6.537453 | TGGTCTTGGTGAAGAAAATGAAAA | 57.463 | 33.333 | 0.00 | 0.00 | 40.00 | 2.29 |
7299 | 18459 | 7.123355 | TGGTCTTGGTGAAGAAAATGAAAAT | 57.877 | 32.000 | 0.00 | 0.00 | 40.00 | 1.82 |
7342 | 18502 | 8.330466 | ACATATCAGTACCGAAATTTGTTGAA | 57.670 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
7343 | 18503 | 8.956426 | ACATATCAGTACCGAAATTTGTTGAAT | 58.044 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
7349 | 18509 | 8.977505 | CAGTACCGAAATTTGTTGAATGAAAAT | 58.022 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
199 | 330 | 1.409802 | CCCTCAGCTGCTTGATGGATT | 60.410 | 52.381 | 9.47 | 0.00 | 35.57 | 3.01 |
227 | 358 | 2.875672 | GCAAGAAGTGTGGCACCATAGA | 60.876 | 50.000 | 16.26 | 0.00 | 34.49 | 1.98 |
229 | 360 | 1.533625 | GCAAGAAGTGTGGCACCATA | 58.466 | 50.000 | 16.26 | 0.00 | 34.49 | 2.74 |
270 | 401 | 0.884514 | TGTCTCTTGACTCAGCCTCG | 59.115 | 55.000 | 0.00 | 0.00 | 43.29 | 4.63 |
358 | 489 | 6.476378 | AGGCTTGCACTTCTCTTATTTAAGA | 58.524 | 36.000 | 0.00 | 0.44 | 39.82 | 2.10 |
359 | 490 | 6.749923 | AGGCTTGCACTTCTCTTATTTAAG | 57.250 | 37.500 | 0.00 | 0.00 | 34.65 | 1.85 |
360 | 491 | 7.524717 | AAAGGCTTGCACTTCTCTTATTTAA | 57.475 | 32.000 | 0.00 | 0.00 | 0.00 | 1.52 |
361 | 492 | 7.448469 | AGAAAAGGCTTGCACTTCTCTTATTTA | 59.552 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
362 | 493 | 6.266330 | AGAAAAGGCTTGCACTTCTCTTATTT | 59.734 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
363 | 494 | 5.772169 | AGAAAAGGCTTGCACTTCTCTTATT | 59.228 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
364 | 495 | 5.320277 | AGAAAAGGCTTGCACTTCTCTTAT | 58.680 | 37.500 | 0.00 | 0.00 | 0.00 | 1.73 |
365 | 496 | 4.718961 | AGAAAAGGCTTGCACTTCTCTTA | 58.281 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
366 | 497 | 3.560105 | AGAAAAGGCTTGCACTTCTCTT | 58.440 | 40.909 | 0.00 | 0.00 | 0.00 | 2.85 |
367 | 498 | 3.220674 | AGAAAAGGCTTGCACTTCTCT | 57.779 | 42.857 | 0.00 | 0.00 | 0.00 | 3.10 |
368 | 499 | 3.998099 | AAGAAAAGGCTTGCACTTCTC | 57.002 | 42.857 | 11.26 | 0.00 | 0.00 | 2.87 |
369 | 500 | 5.048434 | GTCATAAGAAAAGGCTTGCACTTCT | 60.048 | 40.000 | 0.00 | 3.06 | 0.00 | 2.85 |
370 | 501 | 5.048434 | AGTCATAAGAAAAGGCTTGCACTTC | 60.048 | 40.000 | 0.00 | 0.34 | 0.00 | 3.01 |
371 | 502 | 4.829492 | AGTCATAAGAAAAGGCTTGCACTT | 59.171 | 37.500 | 0.00 | 9.47 | 0.00 | 3.16 |
372 | 503 | 4.401925 | AGTCATAAGAAAAGGCTTGCACT | 58.598 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
373 | 504 | 4.773323 | AGTCATAAGAAAAGGCTTGCAC | 57.227 | 40.909 | 0.00 | 0.00 | 0.00 | 4.57 |
374 | 505 | 5.072741 | AGAAGTCATAAGAAAAGGCTTGCA | 58.927 | 37.500 | 0.00 | 0.00 | 0.00 | 4.08 |
375 | 506 | 5.414144 | AGAGAAGTCATAAGAAAAGGCTTGC | 59.586 | 40.000 | 0.00 | 0.00 | 0.00 | 4.01 |
376 | 507 | 6.878389 | AGAGAGAAGTCATAAGAAAAGGCTTG | 59.122 | 38.462 | 0.00 | 0.00 | 0.00 | 4.01 |
377 | 508 | 7.014988 | AGAGAGAAGTCATAAGAAAAGGCTT | 57.985 | 36.000 | 0.00 | 0.00 | 0.00 | 4.35 |
378 | 509 | 6.351796 | GGAGAGAGAAGTCATAAGAAAAGGCT | 60.352 | 42.308 | 0.00 | 0.00 | 0.00 | 4.58 |
379 | 510 | 5.815222 | GGAGAGAGAAGTCATAAGAAAAGGC | 59.185 | 44.000 | 0.00 | 0.00 | 0.00 | 4.35 |
380 | 511 | 7.181569 | AGGAGAGAGAAGTCATAAGAAAAGG | 57.818 | 40.000 | 0.00 | 0.00 | 0.00 | 3.11 |
381 | 512 | 7.093552 | TGGAGGAGAGAGAAGTCATAAGAAAAG | 60.094 | 40.741 | 0.00 | 0.00 | 0.00 | 2.27 |
382 | 513 | 6.726299 | TGGAGGAGAGAGAAGTCATAAGAAAA | 59.274 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
383 | 514 | 6.153680 | GTGGAGGAGAGAGAAGTCATAAGAAA | 59.846 | 42.308 | 0.00 | 0.00 | 0.00 | 2.52 |
384 | 515 | 5.654650 | GTGGAGGAGAGAGAAGTCATAAGAA | 59.345 | 44.000 | 0.00 | 0.00 | 0.00 | 2.52 |
385 | 516 | 5.197451 | GTGGAGGAGAGAGAAGTCATAAGA | 58.803 | 45.833 | 0.00 | 0.00 | 0.00 | 2.10 |
386 | 517 | 4.340950 | GGTGGAGGAGAGAGAAGTCATAAG | 59.659 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
387 | 518 | 4.017037 | AGGTGGAGGAGAGAGAAGTCATAA | 60.017 | 45.833 | 0.00 | 0.00 | 0.00 | 1.90 |
388 | 519 | 3.529734 | AGGTGGAGGAGAGAGAAGTCATA | 59.470 | 47.826 | 0.00 | 0.00 | 0.00 | 2.15 |
389 | 520 | 2.314549 | AGGTGGAGGAGAGAGAAGTCAT | 59.685 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
390 | 521 | 1.713647 | AGGTGGAGGAGAGAGAAGTCA | 59.286 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
391 | 522 | 2.291282 | TGAGGTGGAGGAGAGAGAAGTC | 60.291 | 54.545 | 0.00 | 0.00 | 0.00 | 3.01 |
392 | 523 | 1.713647 | TGAGGTGGAGGAGAGAGAAGT | 59.286 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
393 | 524 | 2.523325 | TGAGGTGGAGGAGAGAGAAG | 57.477 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
394 | 525 | 2.313041 | TGATGAGGTGGAGGAGAGAGAA | 59.687 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
395 | 526 | 1.925959 | TGATGAGGTGGAGGAGAGAGA | 59.074 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
396 | 527 | 2.450867 | TGATGAGGTGGAGGAGAGAG | 57.549 | 55.000 | 0.00 | 0.00 | 0.00 | 3.20 |
397 | 528 | 2.517553 | AGATGATGAGGTGGAGGAGAGA | 59.482 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
398 | 529 | 2.961510 | AGATGATGAGGTGGAGGAGAG | 58.038 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
399 | 530 | 4.756203 | ATAGATGATGAGGTGGAGGAGA | 57.244 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
400 | 531 | 4.592351 | ACAATAGATGATGAGGTGGAGGAG | 59.408 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
401 | 532 | 4.560739 | ACAATAGATGATGAGGTGGAGGA | 58.439 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
402 | 533 | 4.970860 | ACAATAGATGATGAGGTGGAGG | 57.029 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
403 | 534 | 5.010112 | ACGTACAATAGATGATGAGGTGGAG | 59.990 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
404 | 535 | 4.893524 | ACGTACAATAGATGATGAGGTGGA | 59.106 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
405 | 536 | 4.984785 | CACGTACAATAGATGATGAGGTGG | 59.015 | 45.833 | 0.00 | 0.00 | 0.00 | 4.61 |
406 | 537 | 5.592054 | ACACGTACAATAGATGATGAGGTG | 58.408 | 41.667 | 0.00 | 0.00 | 34.65 | 4.00 |
407 | 538 | 5.359860 | TGACACGTACAATAGATGATGAGGT | 59.640 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
408 | 539 | 5.831997 | TGACACGTACAATAGATGATGAGG | 58.168 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
409 | 540 | 7.115520 | GGAATGACACGTACAATAGATGATGAG | 59.884 | 40.741 | 0.00 | 0.00 | 0.00 | 2.90 |
410 | 541 | 6.923508 | GGAATGACACGTACAATAGATGATGA | 59.076 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
411 | 542 | 6.925718 | AGGAATGACACGTACAATAGATGATG | 59.074 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
412 | 543 | 7.055667 | AGGAATGACACGTACAATAGATGAT | 57.944 | 36.000 | 0.00 | 0.00 | 0.00 | 2.45 |
413 | 544 | 6.465439 | AGGAATGACACGTACAATAGATGA | 57.535 | 37.500 | 0.00 | 0.00 | 0.00 | 2.92 |
414 | 545 | 8.135529 | TCTTAGGAATGACACGTACAATAGATG | 58.864 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
415 | 546 | 8.234136 | TCTTAGGAATGACACGTACAATAGAT | 57.766 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
416 | 547 | 7.634671 | TCTTAGGAATGACACGTACAATAGA | 57.365 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
417 | 548 | 9.961265 | TTATCTTAGGAATGACACGTACAATAG | 57.039 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
418 | 549 | 9.740239 | GTTATCTTAGGAATGACACGTACAATA | 57.260 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
419 | 550 | 8.255206 | TGTTATCTTAGGAATGACACGTACAAT | 58.745 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
420 | 551 | 7.604549 | TGTTATCTTAGGAATGACACGTACAA | 58.395 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
421 | 552 | 7.160547 | TGTTATCTTAGGAATGACACGTACA | 57.839 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
422 | 553 | 8.540492 | CAATGTTATCTTAGGAATGACACGTAC | 58.460 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
423 | 554 | 8.255206 | ACAATGTTATCTTAGGAATGACACGTA | 58.745 | 33.333 | 0.00 | 0.00 | 0.00 | 3.57 |
424 | 555 | 7.103641 | ACAATGTTATCTTAGGAATGACACGT | 58.896 | 34.615 | 0.00 | 0.00 | 0.00 | 4.49 |
425 | 556 | 7.539712 | ACAATGTTATCTTAGGAATGACACG | 57.460 | 36.000 | 0.00 | 0.00 | 0.00 | 4.49 |
426 | 557 | 9.378551 | TGTACAATGTTATCTTAGGAATGACAC | 57.621 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
429 | 560 | 9.056005 | GCATGTACAATGTTATCTTAGGAATGA | 57.944 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
430 | 561 | 8.292448 | GGCATGTACAATGTTATCTTAGGAATG | 58.708 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
431 | 562 | 7.448469 | GGGCATGTACAATGTTATCTTAGGAAT | 59.552 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
432 | 563 | 6.770785 | GGGCATGTACAATGTTATCTTAGGAA | 59.229 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
433 | 564 | 6.101150 | AGGGCATGTACAATGTTATCTTAGGA | 59.899 | 38.462 | 0.00 | 0.00 | 0.00 | 2.94 |
434 | 565 | 6.299141 | AGGGCATGTACAATGTTATCTTAGG | 58.701 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
435 | 566 | 8.902540 | TTAGGGCATGTACAATGTTATCTTAG | 57.097 | 34.615 | 0.00 | 0.00 | 0.00 | 2.18 |
437 | 568 | 9.284968 | GTATTAGGGCATGTACAATGTTATCTT | 57.715 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
438 | 569 | 8.436778 | TGTATTAGGGCATGTACAATGTTATCT | 58.563 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
439 | 570 | 8.615878 | TGTATTAGGGCATGTACAATGTTATC | 57.384 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
440 | 571 | 7.174946 | GCTGTATTAGGGCATGTACAATGTTAT | 59.825 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
441 | 572 | 6.485313 | GCTGTATTAGGGCATGTACAATGTTA | 59.515 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
442 | 573 | 5.299279 | GCTGTATTAGGGCATGTACAATGTT | 59.701 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
443 | 574 | 4.821805 | GCTGTATTAGGGCATGTACAATGT | 59.178 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
444 | 575 | 4.821260 | TGCTGTATTAGGGCATGTACAATG | 59.179 | 41.667 | 0.00 | 0.12 | 0.00 | 2.82 |
445 | 576 | 5.047566 | TGCTGTATTAGGGCATGTACAAT | 57.952 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
446 | 577 | 4.495690 | TGCTGTATTAGGGCATGTACAA | 57.504 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
447 | 578 | 4.450976 | CTTGCTGTATTAGGGCATGTACA | 58.549 | 43.478 | 0.00 | 0.00 | 35.84 | 2.90 |
448 | 579 | 3.815401 | CCTTGCTGTATTAGGGCATGTAC | 59.185 | 47.826 | 0.00 | 0.00 | 35.84 | 2.90 |
449 | 580 | 3.714280 | TCCTTGCTGTATTAGGGCATGTA | 59.286 | 43.478 | 0.00 | 0.00 | 35.84 | 2.29 |
450 | 581 | 2.509548 | TCCTTGCTGTATTAGGGCATGT | 59.490 | 45.455 | 0.00 | 0.00 | 35.84 | 3.21 |
451 | 582 | 3.213206 | TCCTTGCTGTATTAGGGCATG | 57.787 | 47.619 | 0.00 | 0.00 | 35.84 | 4.06 |
452 | 583 | 3.654806 | AGATCCTTGCTGTATTAGGGCAT | 59.345 | 43.478 | 0.00 | 0.00 | 35.84 | 4.40 |
453 | 584 | 3.048600 | AGATCCTTGCTGTATTAGGGCA | 58.951 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
454 | 585 | 3.778954 | AGATCCTTGCTGTATTAGGGC | 57.221 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
456 | 587 | 9.703892 | GCATATATAGATCCTTGCTGTATTAGG | 57.296 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
457 | 588 | 9.703892 | GGCATATATAGATCCTTGCTGTATTAG | 57.296 | 37.037 | 4.28 | 0.00 | 0.00 | 1.73 |
458 | 589 | 8.651389 | GGGCATATATAGATCCTTGCTGTATTA | 58.349 | 37.037 | 4.28 | 0.00 | 0.00 | 0.98 |
459 | 590 | 7.127801 | TGGGCATATATAGATCCTTGCTGTATT | 59.872 | 37.037 | 4.28 | 0.00 | 0.00 | 1.89 |
460 | 591 | 6.616959 | TGGGCATATATAGATCCTTGCTGTAT | 59.383 | 38.462 | 4.28 | 0.00 | 0.00 | 2.29 |
461 | 592 | 5.963865 | TGGGCATATATAGATCCTTGCTGTA | 59.036 | 40.000 | 4.28 | 0.00 | 0.00 | 2.74 |
462 | 593 | 4.784838 | TGGGCATATATAGATCCTTGCTGT | 59.215 | 41.667 | 4.28 | 0.00 | 0.00 | 4.40 |
463 | 594 | 5.363562 | TGGGCATATATAGATCCTTGCTG | 57.636 | 43.478 | 4.28 | 0.00 | 0.00 | 4.41 |
464 | 595 | 6.389278 | AGAATGGGCATATATAGATCCTTGCT | 59.611 | 38.462 | 4.28 | 0.00 | 0.00 | 3.91 |
465 | 596 | 6.599445 | AGAATGGGCATATATAGATCCTTGC | 58.401 | 40.000 | 0.00 | 0.00 | 0.00 | 4.01 |
466 | 597 | 7.013083 | GCAAGAATGGGCATATATAGATCCTTG | 59.987 | 40.741 | 0.00 | 0.00 | 0.00 | 3.61 |
467 | 598 | 7.059156 | GCAAGAATGGGCATATATAGATCCTT | 58.941 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
468 | 599 | 6.599445 | GCAAGAATGGGCATATATAGATCCT | 58.401 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
469 | 600 | 5.468072 | CGCAAGAATGGGCATATATAGATCC | 59.532 | 44.000 | 0.00 | 0.00 | 43.02 | 3.36 |
470 | 601 | 5.468072 | CCGCAAGAATGGGCATATATAGATC | 59.532 | 44.000 | 0.00 | 0.00 | 38.13 | 2.75 |
471 | 602 | 5.371526 | CCGCAAGAATGGGCATATATAGAT | 58.628 | 41.667 | 0.00 | 0.00 | 38.13 | 1.98 |
472 | 603 | 4.769688 | CCGCAAGAATGGGCATATATAGA | 58.230 | 43.478 | 0.00 | 0.00 | 38.13 | 1.98 |
473 | 604 | 3.313526 | GCCGCAAGAATGGGCATATATAG | 59.686 | 47.826 | 0.00 | 0.00 | 40.54 | 1.31 |
474 | 605 | 3.054434 | AGCCGCAAGAATGGGCATATATA | 60.054 | 43.478 | 3.92 | 0.00 | 42.20 | 0.86 |
475 | 606 | 2.094675 | GCCGCAAGAATGGGCATATAT | 58.905 | 47.619 | 0.00 | 0.00 | 40.54 | 0.86 |
476 | 607 | 1.073763 | AGCCGCAAGAATGGGCATATA | 59.926 | 47.619 | 3.92 | 0.00 | 42.20 | 0.86 |
477 | 608 | 0.178981 | AGCCGCAAGAATGGGCATAT | 60.179 | 50.000 | 3.92 | 0.00 | 42.20 | 1.78 |
478 | 609 | 1.102809 | CAGCCGCAAGAATGGGCATA | 61.103 | 55.000 | 3.92 | 0.00 | 42.20 | 3.14 |
479 | 610 | 2.043652 | AGCCGCAAGAATGGGCAT | 60.044 | 55.556 | 3.92 | 0.00 | 42.20 | 4.40 |
480 | 611 | 3.063704 | CAGCCGCAAGAATGGGCA | 61.064 | 61.111 | 3.92 | 0.00 | 42.20 | 5.36 |
481 | 612 | 3.056313 | GACAGCCGCAAGAATGGGC | 62.056 | 63.158 | 0.00 | 0.00 | 40.91 | 5.36 |
482 | 613 | 2.753966 | CGACAGCCGCAAGAATGGG | 61.754 | 63.158 | 0.00 | 0.00 | 43.02 | 4.00 |
483 | 614 | 1.577328 | AACGACAGCCGCAAGAATGG | 61.577 | 55.000 | 0.00 | 0.00 | 43.32 | 3.16 |
484 | 615 | 1.075542 | TAACGACAGCCGCAAGAATG | 58.924 | 50.000 | 0.00 | 0.00 | 43.32 | 2.67 |
485 | 616 | 2.024176 | ATAACGACAGCCGCAAGAAT | 57.976 | 45.000 | 0.00 | 0.00 | 43.32 | 2.40 |
486 | 617 | 1.803334 | AATAACGACAGCCGCAAGAA | 58.197 | 45.000 | 0.00 | 0.00 | 43.32 | 2.52 |
487 | 618 | 1.803334 | AAATAACGACAGCCGCAAGA | 58.197 | 45.000 | 0.00 | 0.00 | 43.32 | 3.02 |
488 | 619 | 2.611974 | AAAATAACGACAGCCGCAAG | 57.388 | 45.000 | 0.00 | 0.00 | 43.32 | 4.01 |
505 | 636 | 7.696992 | ACTAAAACACAGACAAGGAGAAAAA | 57.303 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
506 | 637 | 7.696992 | AACTAAAACACAGACAAGGAGAAAA | 57.303 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
507 | 638 | 7.281549 | GGTAACTAAAACACAGACAAGGAGAAA | 59.718 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
508 | 639 | 6.764560 | GGTAACTAAAACACAGACAAGGAGAA | 59.235 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
509 | 640 | 6.285990 | GGTAACTAAAACACAGACAAGGAGA | 58.714 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
510 | 641 | 5.469084 | GGGTAACTAAAACACAGACAAGGAG | 59.531 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
511 | 642 | 5.131475 | AGGGTAACTAAAACACAGACAAGGA | 59.869 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
512 | 643 | 5.374071 | AGGGTAACTAAAACACAGACAAGG | 58.626 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
518 | 649 | 6.261381 | TGTTTGCTAGGGTAACTAAAACACAG | 59.739 | 38.462 | 0.00 | 0.00 | 37.42 | 3.66 |
520 | 651 | 6.622833 | TGTTTGCTAGGGTAACTAAAACAC | 57.377 | 37.500 | 0.00 | 0.00 | 37.42 | 3.32 |
523 | 654 | 9.223099 | GTAGAATGTTTGCTAGGGTAACTAAAA | 57.777 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
526 | 657 | 7.729124 | AGTAGAATGTTTGCTAGGGTAACTA | 57.271 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
539 | 670 | 6.823689 | AGTGTCAACTGTCAAGTAGAATGTTT | 59.176 | 34.615 | 0.00 | 0.00 | 34.77 | 2.83 |
577 | 711 | 1.421410 | GGCATGCGAGTTTCGACGAT | 61.421 | 55.000 | 12.44 | 0.00 | 43.74 | 3.73 |
578 | 712 | 2.092291 | GGCATGCGAGTTTCGACGA | 61.092 | 57.895 | 12.44 | 0.00 | 43.74 | 4.20 |
597 | 731 | 2.920384 | TGTGTCCAGGCAGCGGTA | 60.920 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
598 | 732 | 4.626081 | GTGTGTCCAGGCAGCGGT | 62.626 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
605 | 739 | 2.507110 | ATTCGGCGAGTGTGTCCAGG | 62.507 | 60.000 | 10.46 | 0.00 | 0.00 | 4.45 |
606 | 740 | 1.078759 | GATTCGGCGAGTGTGTCCAG | 61.079 | 60.000 | 10.41 | 0.00 | 0.00 | 3.86 |
607 | 741 | 1.080093 | GATTCGGCGAGTGTGTCCA | 60.080 | 57.895 | 10.41 | 0.00 | 0.00 | 4.02 |
608 | 742 | 2.158959 | CGATTCGGCGAGTGTGTCC | 61.159 | 63.158 | 10.41 | 0.00 | 0.00 | 4.02 |
609 | 743 | 1.443872 | ACGATTCGGCGAGTGTGTC | 60.444 | 57.895 | 10.41 | 4.13 | 34.83 | 3.67 |
610 | 744 | 1.733041 | CACGATTCGGCGAGTGTGT | 60.733 | 57.895 | 22.03 | 13.32 | 34.83 | 3.72 |
611 | 745 | 1.406219 | CTCACGATTCGGCGAGTGTG | 61.406 | 60.000 | 23.44 | 23.44 | 36.16 | 3.82 |
612 | 746 | 1.154016 | CTCACGATTCGGCGAGTGT | 60.154 | 57.895 | 21.94 | 14.27 | 36.16 | 3.55 |
613 | 747 | 1.874019 | CCTCACGATTCGGCGAGTG | 60.874 | 63.158 | 18.36 | 18.36 | 31.69 | 3.51 |
614 | 748 | 2.044555 | TCCTCACGATTCGGCGAGT | 61.045 | 57.895 | 10.46 | 7.31 | 31.69 | 4.18 |
615 | 749 | 1.586564 | GTCCTCACGATTCGGCGAG | 60.587 | 63.158 | 10.46 | 16.50 | 32.81 | 5.03 |
616 | 750 | 2.488355 | GTCCTCACGATTCGGCGA | 59.512 | 61.111 | 4.99 | 4.99 | 34.83 | 5.54 |
637 | 771 | 2.432146 | TGGATCATCTTCGGTCTCTTGG | 59.568 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
647 | 781 | 3.251245 | CAGCTGCTTGATGGATCATCTTC | 59.749 | 47.826 | 0.00 | 0.49 | 41.06 | 2.87 |
676 | 810 | 0.451783 | GCGTGGCACCATAGAAAAGG | 59.548 | 55.000 | 12.86 | 0.00 | 0.00 | 3.11 |
701 | 835 | 1.109323 | AGTCACTTGGGTGCAAAGGC | 61.109 | 55.000 | 1.91 | 0.00 | 42.72 | 4.35 |
711 | 845 | 2.149578 | CAGCCTCAAGAAGTCACTTGG | 58.850 | 52.381 | 0.00 | 0.00 | 44.84 | 3.61 |
733 | 867 | 1.190643 | CCCTCTCCCTGTCTCTTGAC | 58.809 | 60.000 | 0.00 | 0.00 | 43.20 | 3.18 |
734 | 868 | 0.616111 | GCCCTCTCCCTGTCTCTTGA | 60.616 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
735 | 869 | 1.904032 | GCCCTCTCCCTGTCTCTTG | 59.096 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
742 | 876 | 1.827789 | CTCTCTCGCCCTCTCCCTG | 60.828 | 68.421 | 0.00 | 0.00 | 0.00 | 4.45 |
745 | 879 | 0.818040 | GTCTCTCTCTCGCCCTCTCC | 60.818 | 65.000 | 0.00 | 0.00 | 0.00 | 3.71 |
753 | 887 | 1.793714 | GCAGCGAAAGTCTCTCTCTCG | 60.794 | 57.143 | 0.00 | 0.00 | 0.00 | 4.04 |
819 | 988 | 5.519808 | GAAATTTCCTGGGTAATCCTCCTT | 58.480 | 41.667 | 6.95 | 0.00 | 36.20 | 3.36 |
878 | 1047 | 0.671796 | TATGTATGTACTGCGCGGCT | 59.328 | 50.000 | 18.15 | 6.33 | 0.00 | 5.52 |
886 | 1060 | 9.888878 | GTGTACGTATGTTGATATGTATGTACT | 57.111 | 33.333 | 0.00 | 0.00 | 38.33 | 2.73 |
1190 | 1409 | 2.240612 | GAAGTCGTCCAACGCCATGC | 62.241 | 60.000 | 0.00 | 0.00 | 42.21 | 4.06 |
1347 | 3876 | 6.342111 | TCTCGCCAATAAAAACCTTGTTTTT | 58.658 | 32.000 | 18.35 | 18.35 | 35.91 | 1.94 |
1353 | 3882 | 4.906618 | TCTCTCTCGCCAATAAAAACCTT | 58.093 | 39.130 | 0.00 | 0.00 | 0.00 | 3.50 |
1362 | 3891 | 3.356529 | ACCAAAATCTCTCTCGCCAAT | 57.643 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
1453 | 6949 | 0.325296 | TACTAGGTGTCTGGGCCCTG | 60.325 | 60.000 | 25.70 | 23.93 | 0.00 | 4.45 |
1481 | 7334 | 4.495422 | GAGTAGATGTTTGGACGTGTGAT | 58.505 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
1537 | 8607 | 3.243816 | TGGCCTGCTGAGTGCTGA | 61.244 | 61.111 | 3.32 | 0.00 | 42.27 | 4.26 |
1539 | 8609 | 2.744768 | GAAGTGGCCTGCTGAGTGCT | 62.745 | 60.000 | 3.32 | 0.00 | 43.37 | 4.40 |
1556 | 8643 | 0.389817 | CGCGTCTGGACATTGAGGAA | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1557 | 8644 | 1.215382 | CGCGTCTGGACATTGAGGA | 59.785 | 57.895 | 0.00 | 0.00 | 0.00 | 3.71 |
1689 | 8970 | 2.981560 | GCCATGGCGGTCAACACAG | 61.982 | 63.158 | 23.48 | 0.00 | 36.97 | 3.66 |
1691 | 8972 | 3.747976 | GGCCATGGCGGTCAACAC | 61.748 | 66.667 | 29.90 | 10.13 | 40.18 | 3.32 |
1692 | 8973 | 3.918253 | GAGGCCATGGCGGTCAACA | 62.918 | 63.158 | 29.90 | 0.00 | 44.49 | 3.33 |
1693 | 8974 | 3.134127 | GAGGCCATGGCGGTCAAC | 61.134 | 66.667 | 29.90 | 15.18 | 44.49 | 3.18 |
1694 | 8975 | 4.424711 | GGAGGCCATGGCGGTCAA | 62.425 | 66.667 | 29.90 | 0.00 | 44.49 | 3.18 |
1822 | 9111 | 9.672086 | TTCCGAACATACAAAAATAACTTGAAG | 57.328 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
1843 | 9133 | 1.259609 | TCCGCTTTCCTAACTTCCGA | 58.740 | 50.000 | 0.00 | 0.00 | 0.00 | 4.55 |
1860 | 9154 | 1.134401 | TCCGCATGACAGATCCTTTCC | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 3.13 |
1918 | 9489 | 5.931146 | CAGAGTAAGGGATTATCAGCATCAC | 59.069 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1971 | 9557 | 2.670414 | CACTACTCAAACTGCAGCTAGC | 59.330 | 50.000 | 15.27 | 6.62 | 45.96 | 3.42 |
1972 | 9558 | 3.677121 | CACACTACTCAAACTGCAGCTAG | 59.323 | 47.826 | 15.27 | 8.58 | 0.00 | 3.42 |
1973 | 9559 | 3.069586 | ACACACTACTCAAACTGCAGCTA | 59.930 | 43.478 | 15.27 | 0.00 | 0.00 | 3.32 |
1974 | 9560 | 2.158900 | ACACACTACTCAAACTGCAGCT | 60.159 | 45.455 | 15.27 | 0.00 | 0.00 | 4.24 |
1975 | 9561 | 2.213499 | ACACACTACTCAAACTGCAGC | 58.787 | 47.619 | 15.27 | 0.00 | 0.00 | 5.25 |
1976 | 9562 | 5.984233 | TTTACACACTACTCAAACTGCAG | 57.016 | 39.130 | 13.48 | 13.48 | 0.00 | 4.41 |
1977 | 9563 | 6.052360 | TGATTTACACACTACTCAAACTGCA | 58.948 | 36.000 | 0.00 | 0.00 | 0.00 | 4.41 |
1978 | 9564 | 6.539649 | TGATTTACACACTACTCAAACTGC | 57.460 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
1979 | 9565 | 8.612619 | ACTTTGATTTACACACTACTCAAACTG | 58.387 | 33.333 | 0.00 | 0.00 | 31.46 | 3.16 |
1980 | 9566 | 8.732746 | ACTTTGATTTACACACTACTCAAACT | 57.267 | 30.769 | 0.00 | 0.00 | 31.46 | 2.66 |
1981 | 9567 | 9.783256 | AAACTTTGATTTACACACTACTCAAAC | 57.217 | 29.630 | 0.00 | 0.00 | 31.46 | 2.93 |
1991 | 9577 | 9.400638 | CGGCTATTTAAAACTTTGATTTACACA | 57.599 | 29.630 | 0.00 | 0.00 | 0.00 | 3.72 |
2052 | 9638 | 0.173481 | CAGGCTCGGATCAAACTCGA | 59.827 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
2057 | 9643 | 0.038166 | AAAGCCAGGCTCGGATCAAA | 59.962 | 50.000 | 16.53 | 0.00 | 38.25 | 2.69 |
2101 | 9687 | 4.742201 | GTTGAGCGAGCCGAGCCA | 62.742 | 66.667 | 0.00 | 0.00 | 34.64 | 4.75 |
2117 | 9708 | 3.560025 | CCACTTGAAGTAGGCTCATTGGT | 60.560 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
2192 | 9808 | 2.200373 | AAGTAAAGATTGGCGGCAGT | 57.800 | 45.000 | 12.87 | 9.85 | 0.00 | 4.40 |
2207 | 9823 | 9.538508 | GGTTCTGTCTTCTGTAAGTAAAAAGTA | 57.461 | 33.333 | 0.00 | 0.00 | 34.13 | 2.24 |
2209 | 9825 | 8.664211 | AGGTTCTGTCTTCTGTAAGTAAAAAG | 57.336 | 34.615 | 0.00 | 0.00 | 34.13 | 2.27 |
2256 | 9872 | 8.916628 | ATGGGTTTAATTACTGCAAAACAATT | 57.083 | 26.923 | 10.63 | 5.95 | 34.30 | 2.32 |
2414 | 10031 | 4.202503 | TGCCCAATTCTTCCTCTCATATCC | 60.203 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
2511 | 10130 | 7.227910 | AGTTTGCGGATAGTGAAAGTTTCTTTA | 59.772 | 33.333 | 16.33 | 9.09 | 0.00 | 1.85 |
2680 | 10299 | 4.093998 | GTCCAAGCTCATATGTGTCTTGTG | 59.906 | 45.833 | 24.15 | 19.30 | 36.37 | 3.33 |
2685 | 10304 | 3.372206 | GTGTGTCCAAGCTCATATGTGTC | 59.628 | 47.826 | 1.90 | 0.00 | 0.00 | 3.67 |
2691 | 10310 | 8.210265 | TCAAATATATGTGTGTCCAAGCTCATA | 58.790 | 33.333 | 2.77 | 0.00 | 0.00 | 2.15 |
2836 | 10456 | 5.463286 | CAAGCTCATATGTGCTGTTTTTGA | 58.537 | 37.500 | 27.85 | 0.00 | 43.19 | 2.69 |
2922 | 10639 | 3.692101 | CCAGGTATGTCCGTGCAAAATAA | 59.308 | 43.478 | 0.00 | 0.00 | 41.99 | 1.40 |
2970 | 10687 | 4.697756 | CCTCCGGCTCCGCAAACA | 62.698 | 66.667 | 0.00 | 0.00 | 38.24 | 2.83 |
3035 | 10752 | 3.948719 | GGGACCACCGCCTCAACA | 61.949 | 66.667 | 0.00 | 0.00 | 36.97 | 3.33 |
3321 | 11052 | 6.449635 | TGGATTGGTAGATGGAAATTTTCG | 57.550 | 37.500 | 3.17 | 0.00 | 0.00 | 3.46 |
3347 | 11086 | 7.238305 | TCATGGATGGATGAAGTTATAGGACAT | 59.762 | 37.037 | 0.00 | 0.00 | 29.11 | 3.06 |
3409 | 11148 | 3.386402 | TCGTGGATGGATGTATTGTAGCA | 59.614 | 43.478 | 0.00 | 0.00 | 0.00 | 3.49 |
3575 | 11353 | 7.147983 | CCACAGCTCTCTGAACTTTAGTAGTAT | 60.148 | 40.741 | 0.00 | 0.00 | 42.95 | 2.12 |
3599 | 11377 | 0.045623 | TCCTTCCCAATCCCTAGCCA | 59.954 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
3751 | 11536 | 1.696832 | GAGCGATGCCGTGTTTCCTC | 61.697 | 60.000 | 0.00 | 0.00 | 38.24 | 3.71 |
3752 | 11537 | 1.741770 | GAGCGATGCCGTGTTTCCT | 60.742 | 57.895 | 0.00 | 0.00 | 38.24 | 3.36 |
3753 | 11538 | 1.369091 | ATGAGCGATGCCGTGTTTCC | 61.369 | 55.000 | 0.00 | 0.00 | 38.24 | 3.13 |
3754 | 11539 | 0.026803 | GATGAGCGATGCCGTGTTTC | 59.973 | 55.000 | 0.00 | 0.00 | 38.24 | 2.78 |
3755 | 11540 | 1.695893 | CGATGAGCGATGCCGTGTTT | 61.696 | 55.000 | 0.00 | 0.00 | 44.57 | 2.83 |
3756 | 11541 | 2.167219 | CGATGAGCGATGCCGTGTT | 61.167 | 57.895 | 0.00 | 0.00 | 44.57 | 3.32 |
3757 | 11542 | 2.583319 | CGATGAGCGATGCCGTGT | 60.583 | 61.111 | 0.00 | 0.00 | 44.57 | 4.49 |
3758 | 11543 | 3.993234 | GCGATGAGCGATGCCGTG | 61.993 | 66.667 | 0.00 | 0.00 | 44.57 | 4.94 |
3768 | 11553 | 0.683412 | TCTGGATCCATGGCGATGAG | 59.317 | 55.000 | 16.63 | 0.00 | 0.00 | 2.90 |
3769 | 11554 | 1.355112 | ATCTGGATCCATGGCGATGA | 58.645 | 50.000 | 16.63 | 7.52 | 0.00 | 2.92 |
3770 | 11555 | 2.195741 | AATCTGGATCCATGGCGATG | 57.804 | 50.000 | 16.63 | 1.19 | 0.00 | 3.84 |
3771 | 11556 | 2.511659 | CAAATCTGGATCCATGGCGAT | 58.488 | 47.619 | 16.63 | 11.63 | 0.00 | 4.58 |
3772 | 11557 | 1.971481 | CAAATCTGGATCCATGGCGA | 58.029 | 50.000 | 16.63 | 9.54 | 0.00 | 5.54 |
3773 | 11558 | 0.313043 | GCAAATCTGGATCCATGGCG | 59.687 | 55.000 | 16.63 | 3.29 | 0.00 | 5.69 |
3774 | 11559 | 0.313043 | CGCAAATCTGGATCCATGGC | 59.687 | 55.000 | 16.63 | 9.13 | 0.00 | 4.40 |
3775 | 11560 | 0.956633 | CCGCAAATCTGGATCCATGG | 59.043 | 55.000 | 16.63 | 4.97 | 0.00 | 3.66 |
3776 | 11561 | 1.335810 | CACCGCAAATCTGGATCCATG | 59.664 | 52.381 | 16.63 | 11.93 | 0.00 | 3.66 |
3777 | 11562 | 1.064463 | ACACCGCAAATCTGGATCCAT | 60.064 | 47.619 | 16.63 | 0.00 | 0.00 | 3.41 |
3778 | 11563 | 0.327924 | ACACCGCAAATCTGGATCCA | 59.672 | 50.000 | 15.27 | 15.27 | 0.00 | 3.41 |
3779 | 11564 | 0.734889 | CACACCGCAAATCTGGATCC | 59.265 | 55.000 | 4.20 | 4.20 | 0.00 | 3.36 |
3780 | 11565 | 0.734889 | CCACACCGCAAATCTGGATC | 59.265 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3781 | 11566 | 1.315257 | GCCACACCGCAAATCTGGAT | 61.315 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3782 | 11567 | 1.971167 | GCCACACCGCAAATCTGGA | 60.971 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
3783 | 11568 | 2.568090 | GCCACACCGCAAATCTGG | 59.432 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
3784 | 11569 | 2.176546 | CGCCACACCGCAAATCTG | 59.823 | 61.111 | 0.00 | 0.00 | 0.00 | 2.90 |
3785 | 11570 | 2.031919 | TCGCCACACCGCAAATCT | 59.968 | 55.556 | 0.00 | 0.00 | 0.00 | 2.40 |
3786 | 11571 | 2.480555 | CTCGCCACACCGCAAATC | 59.519 | 61.111 | 0.00 | 0.00 | 0.00 | 2.17 |
3787 | 11572 | 3.055719 | CCTCGCCACACCGCAAAT | 61.056 | 61.111 | 0.00 | 0.00 | 0.00 | 2.32 |
3788 | 11573 | 3.758973 | TTCCTCGCCACACCGCAAA | 62.759 | 57.895 | 0.00 | 0.00 | 0.00 | 3.68 |
3789 | 11574 | 3.758973 | TTTCCTCGCCACACCGCAA | 62.759 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 |
3790 | 11575 | 4.243008 | TTTCCTCGCCACACCGCA | 62.243 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
3791 | 11576 | 3.723348 | GTTTCCTCGCCACACCGC | 61.723 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
3792 | 11577 | 3.411351 | CGTTTCCTCGCCACACCG | 61.411 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
3800 | 11585 | 3.913573 | CGATGCCGCGTTTCCTCG | 61.914 | 66.667 | 4.92 | 4.54 | 0.00 | 4.63 |
3879 | 11664 | 3.005897 | CAGTCTCTCGTTTCTCCCTTTCA | 59.994 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
3890 | 11675 | 1.115930 | ACCACAGCCAGTCTCTCGTT | 61.116 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3900 | 11685 | 2.591429 | CACGAGCAACCACAGCCA | 60.591 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
3993 | 11778 | 0.391263 | ACCGAGCCGATCCAAGTTTC | 60.391 | 55.000 | 0.00 | 0.00 | 0.00 | 2.78 |
4002 | 11787 | 3.426117 | ATTTCGCGACCGAGCCGAT | 62.426 | 57.895 | 9.15 | 0.00 | 45.35 | 4.18 |
4013 | 11798 | 0.732538 | GAAAACAGGCCCATTTCGCG | 60.733 | 55.000 | 0.00 | 0.00 | 0.00 | 5.87 |
4016 | 11801 | 2.029020 | GGTCTGAAAACAGGCCCATTTC | 60.029 | 50.000 | 15.17 | 15.17 | 40.94 | 2.17 |
4020 | 11805 | 4.920828 | GGTCTGAAAACAGGCCCA | 57.079 | 55.556 | 9.39 | 0.00 | 40.94 | 5.36 |
4025 | 11810 | 0.955919 | GGGCCGAGGTCTGAAAACAG | 60.956 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4049 | 11834 | 1.468395 | GCTCGGCTCGATAGGATTAGC | 60.468 | 57.143 | 0.00 | 0.00 | 34.61 | 3.09 |
4084 | 11869 | 4.537433 | GCCCGAAGCTCGCTCCAT | 62.537 | 66.667 | 0.00 | 0.00 | 38.82 | 3.41 |
4108 | 11893 | 0.634232 | GACGTACGAGCGAGCTTTTC | 59.366 | 55.000 | 24.41 | 0.35 | 35.59 | 2.29 |
4136 | 11921 | 4.657436 | ACCGCTATAATGAGGCTATAGC | 57.343 | 45.455 | 16.78 | 16.78 | 45.71 | 2.97 |
4137 | 11922 | 6.631016 | TCAAACCGCTATAATGAGGCTATAG | 58.369 | 40.000 | 0.00 | 0.00 | 33.99 | 1.31 |
4138 | 11923 | 6.210784 | ACTCAAACCGCTATAATGAGGCTATA | 59.789 | 38.462 | 6.11 | 0.00 | 41.34 | 1.31 |
4163 | 11948 | 3.250762 | GCTGATCATTTAGCGGCACATTA | 59.749 | 43.478 | 1.45 | 0.00 | 45.55 | 1.90 |
4165 | 11950 | 1.605710 | GCTGATCATTTAGCGGCACAT | 59.394 | 47.619 | 1.45 | 0.00 | 45.55 | 3.21 |
4210 | 11995 | 5.388654 | AGCTGGCTATTGCATAACCTTATT | 58.611 | 37.500 | 0.66 | 0.00 | 41.91 | 1.40 |
4242 | 12027 | 3.659183 | AGCAGCAGTCCTCCAAATTAT | 57.341 | 42.857 | 0.00 | 0.00 | 0.00 | 1.28 |
4244 | 12029 | 3.201708 | AGATAGCAGCAGTCCTCCAAATT | 59.798 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
4355 | 12141 | 7.449395 | AGAATTAGCCAAGCAAATAGCATGATA | 59.551 | 33.333 | 0.00 | 0.00 | 44.41 | 2.15 |
4712 | 12551 | 8.273780 | AGGATCAGTAACATTCACAAAATCTC | 57.726 | 34.615 | 0.00 | 0.00 | 0.00 | 2.75 |
4952 | 12830 | 5.501156 | AGACCTGTTTATCCACCAGAAATC | 58.499 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
5019 | 12900 | 3.243267 | GCATTGTAAAGTCGGTGGTGTTT | 60.243 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
5021 | 12902 | 1.877443 | GCATTGTAAAGTCGGTGGTGT | 59.123 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
5193 | 13077 | 3.181464 | GGTACTCCTGATTTCTGGGTAGC | 60.181 | 52.174 | 13.21 | 13.21 | 35.01 | 3.58 |
5274 | 13158 | 2.380064 | AGTGCTGACCATGGGAAAAA | 57.620 | 45.000 | 18.09 | 0.00 | 0.00 | 1.94 |
5280 | 16358 | 0.524862 | GCTTGAAGTGCTGACCATGG | 59.475 | 55.000 | 11.19 | 11.19 | 0.00 | 3.66 |
5536 | 16636 | 0.389166 | GTCACCACTCTTCTGGAGCG | 60.389 | 60.000 | 0.00 | 0.00 | 45.48 | 5.03 |
5684 | 16784 | 1.351683 | ACGATAGCCGATACTCCTCCT | 59.648 | 52.381 | 0.00 | 0.00 | 41.76 | 3.69 |
5690 | 16790 | 4.072839 | TCTCATCAACGATAGCCGATACT | 58.927 | 43.478 | 0.00 | 0.00 | 41.76 | 2.12 |
5862 | 16969 | 6.691388 | GCAACTTAATTTGTATCCGGATTGTC | 59.309 | 38.462 | 24.71 | 13.92 | 0.00 | 3.18 |
5869 | 16976 | 6.176975 | TGTCAGCAACTTAATTTGTATCCG | 57.823 | 37.500 | 7.31 | 0.00 | 0.00 | 4.18 |
5913 | 17027 | 1.201343 | GCGCAGAATCTAGACGGAAC | 58.799 | 55.000 | 0.30 | 0.00 | 0.00 | 3.62 |
6105 | 17219 | 3.003068 | GCATGAGAGTTGAAATGGATCCG | 59.997 | 47.826 | 7.39 | 0.00 | 0.00 | 4.18 |
6174 | 17288 | 4.202461 | ACACTTTCCACATCAGCCTTTCTA | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
6268 | 17388 | 4.018415 | ACCAGCTACATGGAAGGTTTGTAT | 60.018 | 41.667 | 0.00 | 0.00 | 43.57 | 2.29 |
6274 | 17394 | 3.117888 | CCAATACCAGCTACATGGAAGGT | 60.118 | 47.826 | 0.00 | 0.00 | 43.57 | 3.50 |
6291 | 17411 | 1.641714 | ACACCCCCGGAATTTCCAATA | 59.358 | 47.619 | 15.58 | 0.00 | 35.91 | 1.90 |
6296 | 17416 | 0.033503 | ATGGACACCCCCGGAATTTC | 60.034 | 55.000 | 0.73 | 0.00 | 0.00 | 2.17 |
6363 | 17483 | 0.397394 | AGCCACCATGCATGCCATTA | 60.397 | 50.000 | 21.69 | 0.00 | 29.71 | 1.90 |
6385 | 17508 | 3.184628 | TCTGAATGTGTCCTTCAGGGAT | 58.815 | 45.455 | 11.83 | 0.00 | 46.21 | 3.85 |
6392 | 17515 | 4.639310 | GCATCTCAATCTGAATGTGTCCTT | 59.361 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
6724 | 17883 | 1.292992 | GAACCAAGGTTCGAACACGT | 58.707 | 50.000 | 28.24 | 15.13 | 43.82 | 4.49 |
6835 | 17994 | 2.041620 | TCCCCACTTCAAAGATTCAGGG | 59.958 | 50.000 | 0.00 | 0.00 | 34.81 | 4.45 |
6836 | 17995 | 3.439857 | TCCCCACTTCAAAGATTCAGG | 57.560 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
6850 | 18009 | 1.202940 | AGAAAGCCTGAACTTCCCCAC | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
6863 | 18022 | 1.936547 | CAGGCGATGTTCTAGAAAGCC | 59.063 | 52.381 | 23.77 | 23.77 | 43.07 | 4.35 |
6876 | 18035 | 0.249322 | CGGTTCGGATTACAGGCGAT | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
6881 | 18040 | 0.174845 | TGCCTCGGTTCGGATTACAG | 59.825 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
6890 | 18049 | 5.539048 | ACATATGTAATACTGCCTCGGTTC | 58.461 | 41.667 | 6.56 | 0.00 | 0.00 | 3.62 |
6894 | 18053 | 6.678878 | ACACTACATATGTAATACTGCCTCG | 58.321 | 40.000 | 16.17 | 3.90 | 0.00 | 4.63 |
6927 | 18086 | 5.491070 | TCTTAGCATTCTTAGCACACATGT | 58.509 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
7071 | 18231 | 3.996363 | GTGTGCACATCACTCACTGAATA | 59.004 | 43.478 | 24.69 | 0.00 | 45.81 | 1.75 |
7110 | 18270 | 7.384932 | GCTTCAAAAAGGCAACATAAGTAATGT | 59.615 | 33.333 | 0.00 | 0.00 | 40.57 | 2.71 |
7126 | 18286 | 1.971962 | GCACATCGTCGCTTCAAAAAG | 59.028 | 47.619 | 0.00 | 0.00 | 35.47 | 2.27 |
7127 | 18287 | 1.601903 | AGCACATCGTCGCTTCAAAAA | 59.398 | 42.857 | 0.00 | 0.00 | 33.81 | 1.94 |
7128 | 18288 | 1.069973 | CAGCACATCGTCGCTTCAAAA | 60.070 | 47.619 | 0.00 | 0.00 | 35.96 | 2.44 |
7129 | 18289 | 0.512518 | CAGCACATCGTCGCTTCAAA | 59.487 | 50.000 | 0.00 | 0.00 | 35.96 | 2.69 |
7130 | 18290 | 1.291184 | CCAGCACATCGTCGCTTCAA | 61.291 | 55.000 | 0.00 | 0.00 | 35.96 | 2.69 |
7131 | 18291 | 1.737735 | CCAGCACATCGTCGCTTCA | 60.738 | 57.895 | 0.00 | 0.00 | 35.96 | 3.02 |
7132 | 18292 | 1.291877 | AACCAGCACATCGTCGCTTC | 61.292 | 55.000 | 0.00 | 0.00 | 35.96 | 3.86 |
7133 | 18293 | 1.291877 | GAACCAGCACATCGTCGCTT | 61.292 | 55.000 | 0.00 | 0.00 | 35.96 | 4.68 |
7134 | 18294 | 1.738099 | GAACCAGCACATCGTCGCT | 60.738 | 57.895 | 0.00 | 0.00 | 39.66 | 4.93 |
7135 | 18295 | 2.740714 | GGAACCAGCACATCGTCGC | 61.741 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
7136 | 18296 | 3.474806 | GGAACCAGCACATCGTCG | 58.525 | 61.111 | 0.00 | 0.00 | 0.00 | 5.12 |
7160 | 18320 | 9.889128 | TGTCTGATTCATCAACATCTATAAACA | 57.111 | 29.630 | 0.00 | 0.00 | 36.18 | 2.83 |
7165 | 18325 | 7.830697 | TGGTTTGTCTGATTCATCAACATCTAT | 59.169 | 33.333 | 4.61 | 0.00 | 36.18 | 1.98 |
7166 | 18326 | 7.167535 | TGGTTTGTCTGATTCATCAACATCTA | 58.832 | 34.615 | 4.61 | 1.33 | 36.18 | 1.98 |
7167 | 18327 | 6.005823 | TGGTTTGTCTGATTCATCAACATCT | 58.994 | 36.000 | 4.61 | 0.00 | 36.18 | 2.90 |
7168 | 18328 | 6.258230 | TGGTTTGTCTGATTCATCAACATC | 57.742 | 37.500 | 4.61 | 0.00 | 36.18 | 3.06 |
7169 | 18329 | 6.627243 | CATGGTTTGTCTGATTCATCAACAT | 58.373 | 36.000 | 4.61 | 4.24 | 36.18 | 2.71 |
7170 | 18330 | 5.565242 | GCATGGTTTGTCTGATTCATCAACA | 60.565 | 40.000 | 0.00 | 0.00 | 36.18 | 3.33 |
7171 | 18331 | 4.860907 | GCATGGTTTGTCTGATTCATCAAC | 59.139 | 41.667 | 0.00 | 0.00 | 36.18 | 3.18 |
7172 | 18332 | 4.523558 | TGCATGGTTTGTCTGATTCATCAA | 59.476 | 37.500 | 0.00 | 0.00 | 36.18 | 2.57 |
7174 | 18334 | 4.707030 | TGCATGGTTTGTCTGATTCATC | 57.293 | 40.909 | 0.00 | 0.00 | 0.00 | 2.92 |
7175 | 18335 | 4.142026 | CCATGCATGGTTTGTCTGATTCAT | 60.142 | 41.667 | 33.68 | 0.00 | 43.05 | 2.57 |
7176 | 18336 | 3.193903 | CCATGCATGGTTTGTCTGATTCA | 59.806 | 43.478 | 33.68 | 0.00 | 43.05 | 2.57 |
7177 | 18337 | 3.777478 | CCATGCATGGTTTGTCTGATTC | 58.223 | 45.455 | 33.68 | 0.00 | 43.05 | 2.52 |
7178 | 18338 | 3.880047 | CCATGCATGGTTTGTCTGATT | 57.120 | 42.857 | 33.68 | 0.00 | 43.05 | 2.57 |
7190 | 18350 | 2.439409 | TCTTCACCAAGACCATGCATG | 58.561 | 47.619 | 20.19 | 20.19 | 33.38 | 4.06 |
7191 | 18351 | 2.885135 | TCTTCACCAAGACCATGCAT | 57.115 | 45.000 | 0.00 | 0.00 | 33.38 | 3.96 |
7192 | 18352 | 2.655090 | TTCTTCACCAAGACCATGCA | 57.345 | 45.000 | 0.00 | 0.00 | 38.44 | 3.96 |
7193 | 18353 | 4.022068 | TCATTTTCTTCACCAAGACCATGC | 60.022 | 41.667 | 0.00 | 0.00 | 38.44 | 4.06 |
7194 | 18354 | 5.710513 | TCATTTTCTTCACCAAGACCATG | 57.289 | 39.130 | 0.00 | 0.00 | 38.44 | 3.66 |
7195 | 18355 | 6.729690 | TTTCATTTTCTTCACCAAGACCAT | 57.270 | 33.333 | 0.00 | 0.00 | 38.44 | 3.55 |
7196 | 18356 | 6.537453 | TTTTCATTTTCTTCACCAAGACCA | 57.463 | 33.333 | 0.00 | 0.00 | 38.44 | 4.02 |
7197 | 18357 | 7.436933 | AGATTTTCATTTTCTTCACCAAGACC | 58.563 | 34.615 | 0.00 | 0.00 | 38.44 | 3.85 |
7198 | 18358 | 8.137437 | TGAGATTTTCATTTTCTTCACCAAGAC | 58.863 | 33.333 | 0.00 | 0.00 | 38.44 | 3.01 |
7199 | 18359 | 8.236585 | TGAGATTTTCATTTTCTTCACCAAGA | 57.763 | 30.769 | 0.00 | 0.00 | 36.82 | 3.02 |
7200 | 18360 | 8.876275 | TTGAGATTTTCATTTTCTTCACCAAG | 57.124 | 30.769 | 0.00 | 0.00 | 35.27 | 3.61 |
7201 | 18361 | 9.835389 | AATTGAGATTTTCATTTTCTTCACCAA | 57.165 | 25.926 | 0.00 | 0.00 | 35.27 | 3.67 |
7202 | 18362 | 9.835389 | AAATTGAGATTTTCATTTTCTTCACCA | 57.165 | 25.926 | 0.00 | 0.00 | 35.52 | 4.17 |
7221 | 18381 | 9.903682 | ACTGATATGTTTCAACTGAAAATTGAG | 57.096 | 29.630 | 6.46 | 2.35 | 44.58 | 3.02 |
7225 | 18385 | 8.450964 | CGGTACTGATATGTTTCAACTGAAAAT | 58.549 | 33.333 | 6.46 | 5.98 | 44.58 | 1.82 |
7226 | 18386 | 7.658167 | TCGGTACTGATATGTTTCAACTGAAAA | 59.342 | 33.333 | 6.46 | 0.00 | 44.58 | 2.29 |
7227 | 18387 | 7.156000 | TCGGTACTGATATGTTTCAACTGAAA | 58.844 | 34.615 | 0.00 | 0.69 | 41.29 | 2.69 |
7228 | 18388 | 6.693466 | TCGGTACTGATATGTTTCAACTGAA | 58.307 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
7229 | 18389 | 6.275494 | TCGGTACTGATATGTTTCAACTGA | 57.725 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
7230 | 18390 | 6.961359 | TTCGGTACTGATATGTTTCAACTG | 57.039 | 37.500 | 4.94 | 0.00 | 0.00 | 3.16 |
7231 | 18391 | 7.822334 | TCATTTCGGTACTGATATGTTTCAACT | 59.178 | 33.333 | 25.28 | 0.00 | 31.67 | 3.16 |
7232 | 18392 | 7.970384 | TCATTTCGGTACTGATATGTTTCAAC | 58.030 | 34.615 | 25.28 | 0.00 | 31.67 | 3.18 |
7233 | 18393 | 8.554835 | TTCATTTCGGTACTGATATGTTTCAA | 57.445 | 30.769 | 25.28 | 14.81 | 31.67 | 2.69 |
7234 | 18394 | 8.731275 | ATTCATTTCGGTACTGATATGTTTCA | 57.269 | 30.769 | 25.28 | 13.96 | 31.67 | 2.69 |
7235 | 18395 | 8.826710 | TGATTCATTTCGGTACTGATATGTTTC | 58.173 | 33.333 | 25.28 | 22.35 | 31.67 | 2.78 |
7236 | 18396 | 8.731275 | TGATTCATTTCGGTACTGATATGTTT | 57.269 | 30.769 | 25.28 | 17.48 | 31.67 | 2.83 |
7237 | 18397 | 8.204160 | TCTGATTCATTTCGGTACTGATATGTT | 58.796 | 33.333 | 25.28 | 17.74 | 31.67 | 2.71 |
7238 | 18398 | 7.653713 | GTCTGATTCATTTCGGTACTGATATGT | 59.346 | 37.037 | 25.28 | 13.61 | 31.67 | 2.29 |
7239 | 18399 | 7.653311 | TGTCTGATTCATTTCGGTACTGATATG | 59.347 | 37.037 | 22.33 | 22.33 | 0.00 | 1.78 |
7240 | 18400 | 7.726216 | TGTCTGATTCATTTCGGTACTGATAT | 58.274 | 34.615 | 4.94 | 3.34 | 0.00 | 1.63 |
7241 | 18401 | 7.107639 | TGTCTGATTCATTTCGGTACTGATA | 57.892 | 36.000 | 4.94 | 0.59 | 0.00 | 2.15 |
7242 | 18402 | 5.977635 | TGTCTGATTCATTTCGGTACTGAT | 58.022 | 37.500 | 4.94 | 0.00 | 0.00 | 2.90 |
7243 | 18403 | 5.400066 | TGTCTGATTCATTTCGGTACTGA | 57.600 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
7244 | 18404 | 6.307155 | GTTTGTCTGATTCATTTCGGTACTG | 58.693 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
7245 | 18405 | 5.411669 | GGTTTGTCTGATTCATTTCGGTACT | 59.588 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
7246 | 18406 | 5.180492 | TGGTTTGTCTGATTCATTTCGGTAC | 59.820 | 40.000 | 0.00 | 0.00 | 0.00 | 3.34 |
7247 | 18407 | 5.309638 | TGGTTTGTCTGATTCATTTCGGTA | 58.690 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
7248 | 18408 | 4.141287 | TGGTTTGTCTGATTCATTTCGGT | 58.859 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
7249 | 18409 | 4.764679 | TGGTTTGTCTGATTCATTTCGG | 57.235 | 40.909 | 0.00 | 0.00 | 0.00 | 4.30 |
7250 | 18410 | 6.841119 | TGTATGGTTTGTCTGATTCATTTCG | 58.159 | 36.000 | 0.00 | 0.00 | 0.00 | 3.46 |
7251 | 18411 | 7.703621 | CCATGTATGGTTTGTCTGATTCATTTC | 59.296 | 37.037 | 2.66 | 0.00 | 43.05 | 2.17 |
7252 | 18412 | 7.549839 | CCATGTATGGTTTGTCTGATTCATTT | 58.450 | 34.615 | 2.66 | 0.00 | 43.05 | 2.32 |
7253 | 18413 | 7.104043 | CCATGTATGGTTTGTCTGATTCATT | 57.896 | 36.000 | 2.66 | 0.00 | 43.05 | 2.57 |
7311 | 18471 | 9.061610 | CAAATTTCGGTACTGATATGTTTCAAC | 57.938 | 33.333 | 4.94 | 0.00 | 0.00 | 3.18 |
7315 | 18475 | 8.788806 | TCAACAAATTTCGGTACTGATATGTTT | 58.211 | 29.630 | 4.94 | 2.33 | 0.00 | 2.83 |
7342 | 18502 | 7.112779 | CCCCACAAGTACTCTTAGATTTTCAT | 58.887 | 38.462 | 0.00 | 0.00 | 32.07 | 2.57 |
7343 | 18503 | 6.472887 | CCCCACAAGTACTCTTAGATTTTCA | 58.527 | 40.000 | 0.00 | 0.00 | 32.07 | 2.69 |
7349 | 18509 | 2.897350 | TGCCCCACAAGTACTCTTAGA | 58.103 | 47.619 | 0.00 | 0.00 | 32.07 | 2.10 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.