Multiple sequence alignment - TraesCS7A01G153000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G153000 chr7A 100.000 4956 0 0 1 4956 106247458 106242503 0.000000e+00 9153.0
1 TraesCS7A01G153000 chr7B 89.528 3266 216 75 813 4014 59649973 59646770 0.000000e+00 4021.0
2 TraesCS7A01G153000 chr7B 82.104 732 97 18 1 709 59651147 59650427 3.300000e-166 595.0
3 TraesCS7A01G153000 chr7B 96.761 247 1 4 4715 4956 59636296 59636052 5.970000e-109 405.0
4 TraesCS7A01G153000 chr7B 97.778 225 2 3 4702 4925 59642177 59641955 7.780000e-103 385.0
5 TraesCS7A01G153000 chr7B 90.000 110 8 3 4481 4589 59636449 59636342 6.690000e-29 139.0
6 TraesCS7A01G153000 chrUn 90.742 2668 162 40 1515 4142 91517027 91519649 0.000000e+00 3480.0
7 TraesCS7A01G153000 chrUn 85.308 844 76 22 795 1618 91516098 91516913 0.000000e+00 828.0
8 TraesCS7A01G153000 chrUn 95.152 330 6 4 4632 4956 91519940 91520264 3.420000e-141 512.0
9 TraesCS7A01G153000 chrUn 90.476 84 7 1 1 84 91515444 91515526 5.250000e-20 110.0
10 TraesCS7A01G153000 chr2B 86.005 443 45 11 2594 3030 732989996 732990427 4.520000e-125 459.0
11 TraesCS7A01G153000 chr5D 88.235 68 8 0 4331 4398 442206491 442206558 1.140000e-11 82.4
12 TraesCS7A01G153000 chr1D 92.157 51 4 0 4346 4396 60411330 60411280 6.880000e-09 73.1
13 TraesCS7A01G153000 chr6B 87.500 56 6 1 579 634 673700369 673700423 4.140000e-06 63.9
14 TraesCS7A01G153000 chr3B 79.121 91 19 0 136 226 580503851 580503941 4.140000e-06 63.9
15 TraesCS7A01G153000 chr3B 87.037 54 7 0 127 180 772708590 772708643 1.490000e-05 62.1
16 TraesCS7A01G153000 chr3B 85.965 57 6 2 579 634 792875841 792875896 5.360000e-05 60.2
17 TraesCS7A01G153000 chr3B 85.455 55 8 0 580 634 792502332 792502278 1.930000e-04 58.4
18 TraesCS7A01G153000 chr3B 78.351 97 16 4 580 676 793698079 793698170 1.930000e-04 58.4
19 TraesCS7A01G153000 chr3B 83.636 55 9 0 580 634 792568306 792568252 9.000000e-03 52.8
20 TraesCS7A01G153000 chr1B 84.127 63 10 0 572 634 165763074 165763136 1.490000e-05 62.1
21 TraesCS7A01G153000 chr2A 85.714 56 4 4 581 634 693889708 693889761 6.930000e-04 56.5
22 TraesCS7A01G153000 chr5A 100.000 28 0 0 580 607 658340270 658340297 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G153000 chr7A 106242503 106247458 4955 True 9153.0 9153 100.0000 1 4956 1 chr7A.!!$R1 4955
1 TraesCS7A01G153000 chr7B 59646770 59651147 4377 True 2308.0 4021 85.8160 1 4014 2 chr7B.!!$R3 4013
2 TraesCS7A01G153000 chrUn 91515444 91520264 4820 False 1232.5 3480 90.4195 1 4956 4 chrUn.!!$F1 4955

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
363 382 0.035881 AGAGACGACGGTGGTGACTA 59.964 55.000 0.00 0.0 0.00 2.59 F
1767 2458 0.041312 CGAACAAGTTGCGTTCCTGG 60.041 55.000 1.81 0.0 39.69 4.45 F
2639 3333 1.282875 GCTTTCGGTTGTCTGCACC 59.717 57.895 0.00 0.0 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1811 2502 0.032017 AGGTCCCCTGTAGGCAGTAG 60.032 60.0 0.00 0.0 41.02 2.57 R
2648 3342 0.317269 CAAGTGCTGCAACAAGGACG 60.317 55.0 2.77 0.0 42.80 4.79 R
4324 5041 0.032952 TCCTAGCAAGAAACGTGCGT 59.967 50.0 0.00 0.0 46.86 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 4.641541 TCCTTCGTATCCTCGTCAACATTA 59.358 41.667 0.00 0.00 0.00 1.90
64 65 1.610363 TTGGTGCAATTAGTGGCGAA 58.390 45.000 0.00 0.00 0.00 4.70
87 100 2.172483 CTGCTTGTAGCCGTGGACCT 62.172 60.000 0.00 0.00 41.51 3.85
93 106 1.911269 TAGCCGTGGACCTTGCTCA 60.911 57.895 6.30 0.00 35.34 4.26
104 117 0.106335 CCTTGCTCAGCCGAGATCAT 59.894 55.000 0.00 0.00 42.34 2.45
105 118 1.500108 CTTGCTCAGCCGAGATCATC 58.500 55.000 0.00 0.00 42.34 2.92
106 119 0.826062 TTGCTCAGCCGAGATCATCA 59.174 50.000 0.00 0.00 42.34 3.07
113 126 2.311294 CCGAGATCATCAAACCGGC 58.689 57.895 0.00 0.00 0.00 6.13
128 141 2.125106 GGCCATCACCTCGGTCAC 60.125 66.667 0.00 0.00 0.00 3.67
132 145 2.036731 ATCACCTCGGTCACGGGA 59.963 61.111 0.00 0.00 45.57 5.14
174 191 2.908796 GGGCCTGCCTAGGTGTAC 59.091 66.667 11.31 0.00 46.41 2.90
191 208 3.252974 GTACTGTAGCAGCAGGACATT 57.747 47.619 15.36 0.00 46.73 2.71
193 210 1.349026 ACTGTAGCAGCAGGACATTGT 59.651 47.619 11.37 0.00 40.59 2.71
200 217 3.803082 CAGGACATTGTGCGGCGG 61.803 66.667 9.78 0.00 0.00 6.13
267 286 3.056328 GCCTGGGTTTGTCTCCGC 61.056 66.667 0.00 0.00 0.00 5.54
271 290 2.359975 GGGTTTGTCTCCGCCCTG 60.360 66.667 0.00 0.00 38.12 4.45
281 300 3.550431 CCGCCCTGGGTCGATGAT 61.550 66.667 24.64 0.00 0.00 2.45
287 306 1.153369 CTGGGTCGATGATGCCGTT 60.153 57.895 0.00 0.00 0.00 4.44
297 316 0.817229 TGATGCCGTTGTGCAACTCA 60.817 50.000 12.44 10.25 45.84 3.41
312 331 4.308458 TCAAGTCCACCCCGCACG 62.308 66.667 0.00 0.00 0.00 5.34
333 352 2.685897 GTGAGCGAGAAGAGAGTATGGT 59.314 50.000 0.00 0.00 0.00 3.55
363 382 0.035881 AGAGACGACGGTGGTGACTA 59.964 55.000 0.00 0.00 0.00 2.59
377 396 2.263077 GTGACTACGAGCACCAGAATG 58.737 52.381 0.00 0.00 0.00 2.67
378 397 2.094700 GTGACTACGAGCACCAGAATGA 60.095 50.000 0.00 0.00 39.69 2.57
414 433 6.190954 GGTGTATAAACCTCGCAGAAAAAT 57.809 37.500 4.66 0.00 37.24 1.82
418 437 7.481798 GTGTATAAACCTCGCAGAAAAATCTTG 59.518 37.037 0.00 0.00 34.09 3.02
423 442 3.432782 CTCGCAGAAAAATCTTGCATCC 58.567 45.455 0.00 0.00 34.09 3.51
453 472 7.348033 TGGTCCTTCTTTTACTTTCTAAACCA 58.652 34.615 0.00 0.00 0.00 3.67
497 517 2.032030 ACTTCAACAAATCGGCAACTCG 60.032 45.455 0.00 0.00 0.00 4.18
532 555 5.764686 ACGTACAATCGTAGATACCCACATA 59.235 40.000 0.00 0.00 45.12 2.29
546 569 3.186909 CCCACATACACACATACACTCG 58.813 50.000 0.00 0.00 0.00 4.18
549 572 2.496070 ACATACACACATACACTCGCCT 59.504 45.455 0.00 0.00 0.00 5.52
550 573 3.056107 ACATACACACATACACTCGCCTT 60.056 43.478 0.00 0.00 0.00 4.35
570 593 0.374758 CTATGAAAGCACGCACGCAT 59.625 50.000 0.00 0.00 0.00 4.73
585 608 1.374631 GCATGCCTCACAGTCGACA 60.375 57.895 19.50 0.00 0.00 4.35
591 614 0.673985 CCTCACAGTCGACAGGAACA 59.326 55.000 19.50 0.00 0.00 3.18
608 631 1.280457 ACATCTCCTCCCACTGAACC 58.720 55.000 0.00 0.00 0.00 3.62
615 638 1.171308 CTCCCACTGAACCAGCATTG 58.829 55.000 0.00 0.00 34.37 2.82
620 643 2.030540 CCACTGAACCAGCATTGTTGAG 60.031 50.000 1.62 0.00 34.37 3.02
621 644 2.030540 CACTGAACCAGCATTGTTGAGG 60.031 50.000 1.62 0.00 32.16 3.86
632 655 5.645067 CAGCATTGTTGAGGAGTCTGAAATA 59.355 40.000 0.00 0.00 0.00 1.40
633 656 6.149973 CAGCATTGTTGAGGAGTCTGAAATAA 59.850 38.462 0.00 0.00 0.00 1.40
634 657 6.888632 AGCATTGTTGAGGAGTCTGAAATAAT 59.111 34.615 0.00 0.00 0.00 1.28
635 658 8.049117 AGCATTGTTGAGGAGTCTGAAATAATA 58.951 33.333 0.00 0.00 0.00 0.98
636 659 8.677300 GCATTGTTGAGGAGTCTGAAATAATAA 58.323 33.333 0.00 0.00 0.00 1.40
708 745 6.204882 CGTTTCACTTCAAAGAATTACCCTCT 59.795 38.462 0.00 0.00 0.00 3.69
709 746 7.363431 GTTTCACTTCAAAGAATTACCCTCTG 58.637 38.462 0.00 0.00 0.00 3.35
722 759 0.391130 CCCTCTGTCGCCGAATCAAA 60.391 55.000 0.00 0.00 0.00 2.69
723 760 1.656652 CCTCTGTCGCCGAATCAAAT 58.343 50.000 0.00 0.00 0.00 2.32
727 764 0.801872 TGTCGCCGAATCAAATGTGG 59.198 50.000 0.00 0.00 0.00 4.17
729 766 2.004017 GTCGCCGAATCAAATGTGGTA 58.996 47.619 0.00 0.00 0.00 3.25
730 767 2.030457 GTCGCCGAATCAAATGTGGTAG 59.970 50.000 0.00 0.00 0.00 3.18
731 768 2.093921 TCGCCGAATCAAATGTGGTAGA 60.094 45.455 0.00 0.00 0.00 2.59
732 769 2.872245 CGCCGAATCAAATGTGGTAGAT 59.128 45.455 0.00 0.00 0.00 1.98
733 770 4.055360 CGCCGAATCAAATGTGGTAGATA 58.945 43.478 0.00 0.00 0.00 1.98
734 771 4.690748 CGCCGAATCAAATGTGGTAGATAT 59.309 41.667 0.00 0.00 0.00 1.63
735 772 5.389830 CGCCGAATCAAATGTGGTAGATATG 60.390 44.000 0.00 0.00 0.00 1.78
736 773 5.617751 GCCGAATCAAATGTGGTAGATATGC 60.618 44.000 0.00 0.00 0.00 3.14
737 774 5.469760 CCGAATCAAATGTGGTAGATATGCA 59.530 40.000 0.00 0.00 0.00 3.96
738 775 6.017192 CCGAATCAAATGTGGTAGATATGCAA 60.017 38.462 0.00 0.00 0.00 4.08
739 776 7.308770 CCGAATCAAATGTGGTAGATATGCAAT 60.309 37.037 0.00 0.00 0.00 3.56
740 777 8.720562 CGAATCAAATGTGGTAGATATGCAATA 58.279 33.333 0.00 0.00 0.00 1.90
786 823 9.855021 ATGCAATATTTTAGTTTGTGGACTAAC 57.145 29.630 0.00 0.00 40.71 2.34
795 832 2.465860 TGTGGACTAACCGTTCATGG 57.534 50.000 0.00 0.00 42.61 3.66
822 1227 1.527034 TTGCTTCAGATGTCAGCACC 58.473 50.000 8.40 0.00 43.24 5.01
921 1327 0.718904 TCAATCAACGGCGATCAACG 59.281 50.000 16.62 4.67 45.66 4.10
939 1345 2.450476 ACGGACTAATAACCAGGTCGT 58.550 47.619 0.00 0.00 0.00 4.34
943 1349 3.442100 GACTAATAACCAGGTCGTTCGG 58.558 50.000 0.00 0.00 0.00 4.30
964 1370 0.550638 AATGGAGTCCCCCGGGTAAA 60.551 55.000 21.85 0.20 36.47 2.01
965 1371 0.328158 ATGGAGTCCCCCGGGTAAAT 60.328 55.000 21.85 5.77 36.47 1.40
968 1374 0.984432 GAGTCCCCCGGGTAAATCCA 60.984 60.000 21.85 0.00 38.11 3.41
988 1395 2.513666 ACACGGCCACACACACAG 60.514 61.111 2.24 0.00 0.00 3.66
994 1401 4.562425 CCACACACACAGCCCCGT 62.562 66.667 0.00 0.00 0.00 5.28
998 1405 2.842462 ACACACAGCCCCGTCAGA 60.842 61.111 0.00 0.00 0.00 3.27
999 1406 2.217038 ACACACAGCCCCGTCAGAT 61.217 57.895 0.00 0.00 0.00 2.90
1194 1601 3.404773 CCCCCTTCCTCCTGTCAC 58.595 66.667 0.00 0.00 0.00 3.67
1195 1602 1.538876 CCCCCTTCCTCCTGTCACA 60.539 63.158 0.00 0.00 0.00 3.58
1199 1606 0.543749 CCTTCCTCCTGTCACATCCC 59.456 60.000 0.00 0.00 0.00 3.85
1200 1607 0.176680 CTTCCTCCTGTCACATCCCG 59.823 60.000 0.00 0.00 0.00 5.14
1218 1632 3.534056 CCCGCCGTCTTCCCGTAT 61.534 66.667 0.00 0.00 0.00 3.06
1222 1636 1.067582 GCCGTCTTCCCGTATCCTG 59.932 63.158 0.00 0.00 0.00 3.86
1224 1638 0.754217 CCGTCTTCCCGTATCCTGGA 60.754 60.000 0.00 0.00 0.00 3.86
1226 1640 1.687123 CGTCTTCCCGTATCCTGGAAT 59.313 52.381 0.00 0.00 39.79 3.01
1227 1641 2.545952 CGTCTTCCCGTATCCTGGAATG 60.546 54.545 0.00 0.00 39.79 2.67
1228 1642 2.698797 GTCTTCCCGTATCCTGGAATGA 59.301 50.000 0.00 0.00 39.79 2.57
1235 1649 4.887071 CCCGTATCCTGGAATGAAATTTCA 59.113 41.667 22.52 22.52 40.20 2.69
1244 1658 1.821216 ATGAAATTTCACCTCGCCGT 58.179 45.000 22.71 1.94 40.49 5.68
1271 1685 1.226128 GAAAGCTGTGCGCGGATTC 60.226 57.895 10.46 9.39 45.59 2.52
1296 1710 2.241176 TGGTTTCTGTCACTTCTTGGGT 59.759 45.455 0.00 0.00 0.00 4.51
1299 1713 0.249868 TCTGTCACTTCTTGGGTGCG 60.250 55.000 0.00 0.00 34.97 5.34
1328 1761 0.680618 TTTCAGCAGTGGCAAATGGG 59.319 50.000 0.00 0.00 44.61 4.00
1330 1763 0.403655 TCAGCAGTGGCAAATGGGTA 59.596 50.000 0.00 0.00 44.61 3.69
1331 1764 0.527565 CAGCAGTGGCAAATGGGTAC 59.472 55.000 0.00 0.00 44.61 3.34
1332 1765 0.405585 AGCAGTGGCAAATGGGTACT 59.594 50.000 0.00 0.00 44.61 2.73
1333 1766 1.203050 AGCAGTGGCAAATGGGTACTT 60.203 47.619 0.00 0.00 44.61 2.24
1334 1767 1.202348 GCAGTGGCAAATGGGTACTTC 59.798 52.381 0.00 0.00 40.72 3.01
1335 1768 2.795329 CAGTGGCAAATGGGTACTTCT 58.205 47.619 0.00 0.00 0.00 2.85
1336 1769 3.157087 CAGTGGCAAATGGGTACTTCTT 58.843 45.455 0.00 0.00 0.00 2.52
1337 1770 3.057315 CAGTGGCAAATGGGTACTTCTTG 60.057 47.826 0.00 0.00 0.00 3.02
1338 1771 2.231235 GTGGCAAATGGGTACTTCTTGG 59.769 50.000 0.00 0.00 0.00 3.61
1339 1772 1.824852 GGCAAATGGGTACTTCTTGGG 59.175 52.381 0.00 0.00 0.00 4.12
1340 1773 2.525368 GCAAATGGGTACTTCTTGGGT 58.475 47.619 0.00 0.00 0.00 4.51
1341 1774 2.231235 GCAAATGGGTACTTCTTGGGTG 59.769 50.000 0.00 0.00 0.00 4.61
1422 1862 5.449553 GGGATAGGATTTGGATTTGAGTGT 58.550 41.667 0.00 0.00 0.00 3.55
1423 1863 5.300286 GGGATAGGATTTGGATTTGAGTGTG 59.700 44.000 0.00 0.00 0.00 3.82
1427 1867 0.313672 TTTGGATTTGAGTGTGGCGC 59.686 50.000 0.00 0.00 0.00 6.53
1445 1885 1.474478 CGCTCTAGCTTTCACCTGAGA 59.526 52.381 0.00 0.00 39.32 3.27
1448 1888 4.512484 GCTCTAGCTTTCACCTGAGAAAT 58.488 43.478 0.00 0.00 36.94 2.17
1449 1889 5.665459 GCTCTAGCTTTCACCTGAGAAATA 58.335 41.667 0.00 0.00 36.94 1.40
1450 1890 6.287525 GCTCTAGCTTTCACCTGAGAAATAT 58.712 40.000 0.00 0.00 36.94 1.28
1451 1891 6.202570 GCTCTAGCTTTCACCTGAGAAATATG 59.797 42.308 0.00 0.00 36.94 1.78
1452 1892 6.051717 TCTAGCTTTCACCTGAGAAATATGC 58.948 40.000 0.00 0.00 36.94 3.14
1453 1893 4.853007 AGCTTTCACCTGAGAAATATGCT 58.147 39.130 0.00 0.00 36.94 3.79
1454 1894 5.259632 AGCTTTCACCTGAGAAATATGCTT 58.740 37.500 0.00 0.00 34.73 3.91
1455 1895 6.418101 AGCTTTCACCTGAGAAATATGCTTA 58.582 36.000 0.00 0.00 34.73 3.09
1457 1897 6.317391 GCTTTCACCTGAGAAATATGCTTAGT 59.683 38.462 0.00 0.00 36.94 2.24
1462 1902 7.882791 TCACCTGAGAAATATGCTTAGTTTTCA 59.117 33.333 11.00 11.00 31.94 2.69
1516 1963 5.593679 TGGAGCCTTACTACACAATCTAC 57.406 43.478 0.00 0.00 32.72 2.59
1606 2261 7.265599 TGGAATCTTTGGTCTTTACTATCCA 57.734 36.000 0.00 0.00 0.00 3.41
1645 2308 3.254960 ACCTATCTGGCTGCCTGATATT 58.745 45.455 34.19 25.39 41.36 1.28
1646 2309 3.262915 ACCTATCTGGCTGCCTGATATTC 59.737 47.826 34.19 5.22 41.36 1.75
1657 2320 7.164803 GGCTGCCTGATATTCTAGTTTTCTAT 58.835 38.462 12.43 0.00 0.00 1.98
1685 2349 8.370493 ACAATTGATAGTATATGACACAGTGC 57.630 34.615 13.59 0.00 0.00 4.40
1686 2350 7.169813 ACAATTGATAGTATATGACACAGTGCG 59.830 37.037 13.59 0.00 0.00 5.34
1687 2351 5.767816 TGATAGTATATGACACAGTGCGT 57.232 39.130 0.00 0.00 0.00 5.24
1695 2359 3.951332 CACAGTGCGTGTACAGGG 58.049 61.111 16.75 3.70 41.03 4.45
1699 2363 0.955428 CAGTGCGTGTACAGGGCAAT 60.955 55.000 19.77 16.90 38.58 3.56
1700 2364 0.250727 AGTGCGTGTACAGGGCAATT 60.251 50.000 19.77 10.77 38.58 2.32
1701 2365 0.109781 GTGCGTGTACAGGGCAATTG 60.110 55.000 19.77 0.00 38.58 2.32
1702 2366 0.536233 TGCGTGTACAGGGCAATTGT 60.536 50.000 16.78 0.00 33.01 2.71
1703 2367 0.596082 GCGTGTACAGGGCAATTGTT 59.404 50.000 16.75 0.00 0.00 2.83
1719 2393 8.389603 GGGCAATTGTTTGTTAAATCATATGTG 58.610 33.333 7.40 0.00 35.17 3.21
1731 2405 5.489792 AATCATATGTGTGGGGCTACTAG 57.510 43.478 1.90 0.00 0.00 2.57
1736 2410 0.108138 GTGTGGGGCTACTAGCACTG 60.108 60.000 10.20 0.00 45.92 3.66
1737 2411 1.264749 TGTGGGGCTACTAGCACTGG 61.265 60.000 10.20 0.00 45.92 4.00
1738 2412 1.080354 TGGGGCTACTAGCACTGGT 59.920 57.895 10.20 0.00 45.92 4.00
1767 2458 0.041312 CGAACAAGTTGCGTTCCTGG 60.041 55.000 1.81 0.00 39.69 4.45
1810 2501 9.463443 ACTAAGAACAATTAAACATTCTTGTGC 57.537 29.630 15.92 4.91 40.65 4.57
1811 2502 7.713764 AAGAACAATTAAACATTCTTGTGCC 57.286 32.000 9.27 0.00 39.37 5.01
1812 2503 7.054491 AGAACAATTAAACATTCTTGTGCCT 57.946 32.000 0.00 0.00 35.83 4.75
1813 2504 8.177119 AGAACAATTAAACATTCTTGTGCCTA 57.823 30.769 0.00 0.00 35.83 3.93
1822 2513 1.639722 TCTTGTGCCTACTGCCTACA 58.360 50.000 0.00 0.00 40.16 2.74
1871 2562 1.346068 GCCTGGTGACTCTTCTCTTGT 59.654 52.381 0.00 0.00 0.00 3.16
1886 2579 9.796120 CTCTTCTCTTGTACTATCCAAACTAAG 57.204 37.037 0.00 0.00 0.00 2.18
1888 2581 9.575783 CTTCTCTTGTACTATCCAAACTAAGTC 57.424 37.037 0.00 0.00 0.00 3.01
1891 2584 8.418597 TCTTGTACTATCCAAACTAAGTCTGT 57.581 34.615 0.00 0.00 0.00 3.41
1910 2603 2.005451 GTCACCTGCTGCTAGATTGTG 58.995 52.381 0.00 1.79 0.00 3.33
1915 2608 3.131933 ACCTGCTGCTAGATTGTGTAGAG 59.868 47.826 0.00 0.00 0.00 2.43
1958 2651 6.319911 TCTGTACATCTACTGTCAAGATCAGG 59.680 42.308 0.00 0.00 39.39 3.86
1961 2654 6.159299 ACATCTACTGTCAAGATCAGGATG 57.841 41.667 0.00 0.00 37.48 3.51
1963 2656 4.871822 TCTACTGTCAAGATCAGGATGGA 58.128 43.478 0.00 0.00 37.25 3.41
1977 2670 4.825634 TCAGGATGGAATGAGAAATGCATC 59.174 41.667 0.00 0.00 41.87 3.91
1982 2675 2.287427 GGAATGAGAAATGCATCAGCCG 60.287 50.000 0.00 0.00 41.13 5.52
1984 2677 1.825090 TGAGAAATGCATCAGCCGTT 58.175 45.000 0.00 0.00 41.13 4.44
2004 2697 2.044946 GGGCGCCTGACCATTTCT 60.045 61.111 28.56 0.00 45.78 2.52
2006 2699 2.115291 GGCGCCTGACCATTTCTCC 61.115 63.158 22.15 0.00 0.00 3.71
2007 2700 1.377202 GCGCCTGACCATTTCTCCA 60.377 57.895 0.00 0.00 0.00 3.86
2058 2751 4.340381 GCCTTTTCATATGGAGTTGCATCT 59.660 41.667 2.13 0.00 0.00 2.90
2218 2911 2.032924 GGTTGGGTTGTTCACTTTCTCG 59.967 50.000 0.00 0.00 0.00 4.04
2225 2918 5.912955 GGGTTGTTCACTTTCTCGTTTATTG 59.087 40.000 0.00 0.00 0.00 1.90
2281 2974 3.101437 TCGGGCAAGTTCTAGGAATGTA 58.899 45.455 0.00 0.00 0.00 2.29
2327 3020 3.220674 ACAGCAAAGAAGCTTCTTCCT 57.779 42.857 35.46 29.66 46.22 3.36
2465 3158 1.981259 TCTTAAGGGGGAAGGGGAAG 58.019 55.000 1.85 0.00 0.00 3.46
2600 3294 6.458232 TTACTAGAAGCACTTCCTCATCTC 57.542 41.667 6.77 0.00 40.33 2.75
2627 3321 3.595709 TTGTTTTAGGTGTCGCTTTCG 57.404 42.857 0.00 0.00 0.00 3.46
2639 3333 1.282875 GCTTTCGGTTGTCTGCACC 59.717 57.895 0.00 0.00 0.00 5.01
2648 3342 2.820037 GTCTGCACCGCCTTAGGC 60.820 66.667 14.22 14.22 46.75 3.93
2939 3637 3.057596 TCATTGTTGCAACCGGAGAATTC 60.058 43.478 26.14 0.00 0.00 2.17
2980 3678 8.265764 AGTTCTGTCAGAAAAGGTTAGTAAGTT 58.734 33.333 16.86 0.00 35.75 2.66
2983 3681 8.698210 TCTGTCAGAAAAGGTTAGTAAGTTGTA 58.302 33.333 0.00 0.00 0.00 2.41
3048 3746 4.508052 GCAATCTTTTTGTGCTTTGTTCG 58.492 39.130 0.00 0.00 35.36 3.95
3076 3774 3.307242 CCTTTAGCTCATGACTGCGTAAC 59.693 47.826 0.00 0.00 0.00 2.50
3129 3828 7.668052 TGGACTGGCACTTAAATGTTAGTAAAT 59.332 33.333 0.00 0.00 0.00 1.40
3258 3957 7.065443 TCTGCATCATTCAGTGTTATTCTTCTG 59.935 37.037 0.00 0.00 33.48 3.02
3279 3978 4.780815 TGATTTCACTGGTGATGGGTATC 58.219 43.478 4.19 4.55 39.64 2.24
3373 4072 3.830192 GCGTCGGGTCCACGGTAT 61.830 66.667 4.12 0.00 37.74 2.73
3469 4170 1.144913 CCTTTCAGACCCTGGGTTTCA 59.855 52.381 21.59 0.00 35.25 2.69
3549 4250 2.104253 CGGTGGCGTGTGGTATTCC 61.104 63.158 0.00 0.00 0.00 3.01
3670 4373 8.454570 TCGATATAACTTATGTAGTCACACCA 57.545 34.615 0.00 0.00 37.54 4.17
3773 4481 9.073368 GTACAAAGTTGTTCCTTTTCTTTTCTC 57.927 33.333 1.35 0.00 42.35 2.87
3774 4482 7.097192 ACAAAGTTGTTCCTTTTCTTTTCTCC 58.903 34.615 0.00 0.00 38.47 3.71
3904 4612 6.463331 CCACACTGTACTGTACTTTTTCCCTA 60.463 42.308 17.98 0.00 0.00 3.53
3916 4624 8.434392 TGTACTTTTTCCCTATCAGTTGTACTT 58.566 33.333 0.00 0.00 0.00 2.24
3977 4685 4.516698 TCATTTGAAGAGAAACAGACCTGC 59.483 41.667 0.00 0.00 0.00 4.85
3980 4688 2.435805 TGAAGAGAAACAGACCTGCACT 59.564 45.455 0.00 0.00 0.00 4.40
3981 4689 3.118261 TGAAGAGAAACAGACCTGCACTT 60.118 43.478 0.00 0.00 0.00 3.16
4014 4722 3.729862 TGTTGAGAAACATGCATGCAA 57.270 38.095 26.68 17.94 0.00 4.08
4036 4749 0.107312 ATGTGAGCTCTGTGGATGGC 60.107 55.000 16.19 0.00 0.00 4.40
4042 4755 0.737219 GCTCTGTGGATGGCATGAAC 59.263 55.000 3.81 3.20 0.00 3.18
4047 4760 1.339920 TGTGGATGGCATGAACGATGT 60.340 47.619 3.81 0.00 34.14 3.06
4056 4769 4.236935 GGCATGAACGATGTTGTCAAAAT 58.763 39.130 0.00 0.00 34.14 1.82
4062 4775 4.255833 ACGATGTTGTCAAAATGCCAAT 57.744 36.364 0.00 0.00 0.00 3.16
4066 4779 4.052159 TGTTGTCAAAATGCCAATCGTT 57.948 36.364 0.00 0.00 0.00 3.85
4090 4807 3.633525 TGGGCAAAGATAGCAAAGCATAG 59.366 43.478 0.00 0.00 0.00 2.23
4104 4821 2.800250 AGCATAGCTTCACCTTTTGCT 58.200 42.857 0.00 0.00 33.89 3.91
4109 4826 3.214696 AGCTTCACCTTTTGCTACACT 57.785 42.857 0.00 0.00 33.64 3.55
4110 4827 2.880890 AGCTTCACCTTTTGCTACACTG 59.119 45.455 0.00 0.00 33.64 3.66
4111 4828 2.878406 GCTTCACCTTTTGCTACACTGA 59.122 45.455 0.00 0.00 0.00 3.41
4119 4836 4.082625 CCTTTTGCTACACTGATGATTGCA 60.083 41.667 0.00 0.00 0.00 4.08
4125 4842 4.261072 GCTACACTGATGATTGCAAGGATG 60.261 45.833 4.94 0.00 0.00 3.51
4132 4849 4.157105 TGATGATTGCAAGGATGTGTTCTG 59.843 41.667 4.94 0.00 0.00 3.02
4142 4859 6.916387 GCAAGGATGTGTTCTGATCATTTATG 59.084 38.462 0.00 0.00 0.00 1.90
4143 4860 7.423199 CAAGGATGTGTTCTGATCATTTATGG 58.577 38.462 0.00 0.00 0.00 2.74
4145 4862 5.533903 GGATGTGTTCTGATCATTTATGGCT 59.466 40.000 0.00 0.00 0.00 4.75
4147 4864 5.255687 TGTGTTCTGATCATTTATGGCTGT 58.744 37.500 0.00 0.00 0.00 4.40
4148 4865 5.355071 TGTGTTCTGATCATTTATGGCTGTC 59.645 40.000 0.00 0.00 0.00 3.51
4149 4866 4.883585 TGTTCTGATCATTTATGGCTGTCC 59.116 41.667 0.00 0.00 0.00 4.02
4150 4867 4.090761 TCTGATCATTTATGGCTGTCCC 57.909 45.455 0.00 0.00 0.00 4.46
4158 4875 2.361104 TGGCTGTCCCATTTCCGC 60.361 61.111 0.00 0.00 39.18 5.54
4159 4876 3.140814 GGCTGTCCCATTTCCGCC 61.141 66.667 0.00 0.00 0.00 6.13
4160 4877 2.361104 GCTGTCCCATTTCCGCCA 60.361 61.111 0.00 0.00 0.00 5.69
4161 4878 2.409870 GCTGTCCCATTTCCGCCAG 61.410 63.158 0.00 0.00 0.00 4.85
4162 4879 1.750399 CTGTCCCATTTCCGCCAGG 60.750 63.158 0.00 0.00 39.46 4.45
4163 4880 2.355115 GTCCCATTTCCGCCAGGT 59.645 61.111 0.00 0.00 39.05 4.00
4164 4881 1.304134 GTCCCATTTCCGCCAGGTT 60.304 57.895 0.00 0.00 39.05 3.50
4165 4882 1.001393 TCCCATTTCCGCCAGGTTC 60.001 57.895 0.00 0.00 39.05 3.62
4166 4883 2.406616 CCCATTTCCGCCAGGTTCG 61.407 63.158 0.00 0.00 39.05 3.95
4167 4884 1.674322 CCATTTCCGCCAGGTTCGT 60.674 57.895 0.00 0.00 39.05 3.85
4168 4885 1.501741 CATTTCCGCCAGGTTCGTG 59.498 57.895 0.00 0.00 39.05 4.35
4169 4886 2.332654 ATTTCCGCCAGGTTCGTGC 61.333 57.895 0.00 0.00 39.05 5.34
4170 4887 3.758973 TTTCCGCCAGGTTCGTGCA 62.759 57.895 0.00 0.00 39.05 4.57
4171 4888 3.545124 TTCCGCCAGGTTCGTGCAT 62.545 57.895 0.00 0.00 39.05 3.96
4172 4889 3.803082 CCGCCAGGTTCGTGCATG 61.803 66.667 0.00 0.00 0.00 4.06
4173 4890 3.049674 CGCCAGGTTCGTGCATGT 61.050 61.111 5.68 0.00 0.00 3.21
4174 4891 2.562912 GCCAGGTTCGTGCATGTG 59.437 61.111 5.68 0.00 0.00 3.21
4175 4892 1.965930 GCCAGGTTCGTGCATGTGA 60.966 57.895 5.68 0.00 0.00 3.58
4176 4893 1.514678 GCCAGGTTCGTGCATGTGAA 61.515 55.000 5.68 0.18 0.00 3.18
4179 4896 1.195448 CAGGTTCGTGCATGTGAACTC 59.805 52.381 21.21 14.56 43.10 3.01
4187 4904 1.350684 TGCATGTGAACTCCTGGCTTA 59.649 47.619 0.00 0.00 0.00 3.09
4198 4915 0.174162 CCTGGCTTATGCTTTGTGGC 59.826 55.000 0.13 0.00 39.59 5.01
4200 4917 2.368439 CTGGCTTATGCTTTGTGGCTA 58.632 47.619 0.13 0.00 39.59 3.93
4205 4922 4.133078 GCTTATGCTTTGTGGCTATCTCT 58.867 43.478 0.00 0.00 36.03 3.10
4236 4953 4.730966 TGGCCAAACCTTACACTTGATAA 58.269 39.130 0.61 0.00 40.22 1.75
4245 4962 5.045578 ACCTTACACTTGATAAGCTCACCAT 60.046 40.000 0.00 0.00 32.17 3.55
4252 4969 2.159099 TGATAAGCTCACCATGGACGTC 60.159 50.000 21.47 7.13 0.00 4.34
4259 4976 0.594028 CACCATGGACGTCGTATCCG 60.594 60.000 21.47 2.15 39.30 4.18
4263 4980 3.214845 GGACGTCGTATCCGGGCT 61.215 66.667 9.92 0.00 33.95 5.19
4268 4985 0.101040 CGTCGTATCCGGGCTACAAA 59.899 55.000 0.00 0.00 33.95 2.83
4271 4988 2.035576 GTCGTATCCGGGCTACAAATCT 59.964 50.000 0.00 0.00 33.95 2.40
4274 4991 2.622064 ATCCGGGCTACAAATCTGAC 57.378 50.000 0.00 0.00 0.00 3.51
4275 4992 0.174845 TCCGGGCTACAAATCTGACG 59.825 55.000 0.00 0.00 0.00 4.35
4276 4993 0.108329 CCGGGCTACAAATCTGACGT 60.108 55.000 0.00 0.00 0.00 4.34
4277 4994 1.278238 CGGGCTACAAATCTGACGTC 58.722 55.000 9.11 9.11 0.00 4.34
4278 4995 1.403647 CGGGCTACAAATCTGACGTCA 60.404 52.381 18.88 18.88 0.00 4.35
4279 4996 2.000447 GGGCTACAAATCTGACGTCAC 59.000 52.381 15.76 0.91 0.00 3.67
4280 4997 2.611971 GGGCTACAAATCTGACGTCACA 60.612 50.000 15.76 4.70 0.00 3.58
4281 4998 3.262420 GGCTACAAATCTGACGTCACAT 58.738 45.455 15.76 7.43 0.00 3.21
4282 4999 3.684788 GGCTACAAATCTGACGTCACATT 59.315 43.478 15.76 13.97 0.00 2.71
4283 5000 4.154195 GGCTACAAATCTGACGTCACATTT 59.846 41.667 21.57 21.57 0.00 2.32
4284 5001 5.082059 GCTACAAATCTGACGTCACATTTG 58.918 41.667 36.76 36.76 43.34 2.32
4286 5003 6.128661 GCTACAAATCTGACGTCACATTTGTA 60.129 38.462 39.55 39.55 46.29 2.41
4287 5004 6.228273 ACAAATCTGACGTCACATTTGTAG 57.772 37.500 39.97 26.30 46.29 2.74
4288 5005 5.179368 ACAAATCTGACGTCACATTTGTAGG 59.821 40.000 39.97 26.05 46.29 3.18
4289 5006 2.683968 TCTGACGTCACATTTGTAGGC 58.316 47.619 15.76 0.00 0.00 3.93
4290 5007 2.036604 TCTGACGTCACATTTGTAGGCA 59.963 45.455 15.76 0.00 0.00 4.75
4291 5008 3.002791 CTGACGTCACATTTGTAGGCAT 58.997 45.455 15.76 0.00 0.00 4.40
4292 5009 2.741517 TGACGTCACATTTGTAGGCATG 59.258 45.455 15.76 0.00 0.00 4.06
4293 5010 2.083774 ACGTCACATTTGTAGGCATGG 58.916 47.619 0.00 0.00 0.00 3.66
4294 5011 1.202177 CGTCACATTTGTAGGCATGGC 60.202 52.381 12.14 12.14 0.00 4.40
4295 5012 1.818060 GTCACATTTGTAGGCATGGCA 59.182 47.619 22.64 4.62 0.00 4.92
4296 5013 2.230992 GTCACATTTGTAGGCATGGCAA 59.769 45.455 22.64 7.14 0.00 4.52
4297 5014 2.896044 TCACATTTGTAGGCATGGCAAA 59.104 40.909 22.64 13.44 36.68 3.68
4298 5015 3.514706 TCACATTTGTAGGCATGGCAAAT 59.485 39.130 22.64 15.11 41.69 2.32
4299 5016 4.708909 TCACATTTGTAGGCATGGCAAATA 59.291 37.500 22.64 4.49 39.79 1.40
4300 5017 5.363292 TCACATTTGTAGGCATGGCAAATAT 59.637 36.000 22.64 5.31 39.79 1.28
4301 5018 5.464057 CACATTTGTAGGCATGGCAAATATG 59.536 40.000 22.64 17.92 39.79 1.78
4302 5019 5.363292 ACATTTGTAGGCATGGCAAATATGA 59.637 36.000 22.64 1.25 39.79 2.15
4303 5020 6.042322 ACATTTGTAGGCATGGCAAATATGAT 59.958 34.615 22.64 0.00 39.79 2.45
4304 5021 5.456548 TTGTAGGCATGGCAAATATGATG 57.543 39.130 22.64 0.00 0.00 3.07
4305 5022 4.472496 TGTAGGCATGGCAAATATGATGT 58.528 39.130 22.64 0.00 0.00 3.06
4306 5023 4.520111 TGTAGGCATGGCAAATATGATGTC 59.480 41.667 22.64 0.00 0.00 3.06
4307 5024 2.895404 AGGCATGGCAAATATGATGTCC 59.105 45.455 22.64 0.00 0.00 4.02
4308 5025 2.352030 GGCATGGCAAATATGATGTCCG 60.352 50.000 15.47 0.00 0.00 4.79
4309 5026 2.352030 GCATGGCAAATATGATGTCCGG 60.352 50.000 0.00 0.00 0.00 5.14
4310 5027 1.979855 TGGCAAATATGATGTCCGGG 58.020 50.000 0.00 0.00 0.00 5.73
4311 5028 0.598065 GGCAAATATGATGTCCGGGC 59.402 55.000 0.00 0.00 0.00 6.13
4312 5029 1.609208 GCAAATATGATGTCCGGGCT 58.391 50.000 7.97 0.00 0.00 5.19
4313 5030 2.552155 GGCAAATATGATGTCCGGGCTA 60.552 50.000 7.97 0.00 0.00 3.93
4314 5031 2.484264 GCAAATATGATGTCCGGGCTAC 59.516 50.000 7.97 1.28 0.00 3.58
4315 5032 3.738982 CAAATATGATGTCCGGGCTACA 58.261 45.455 7.97 8.00 0.00 2.74
4316 5033 4.133820 CAAATATGATGTCCGGGCTACAA 58.866 43.478 7.97 0.00 0.00 2.41
4317 5034 4.431416 AATATGATGTCCGGGCTACAAA 57.569 40.909 7.97 0.00 0.00 2.83
4318 5035 2.038387 ATGATGTCCGGGCTACAAAC 57.962 50.000 7.97 1.75 0.00 2.93
4319 5036 0.035820 TGATGTCCGGGCTACAAACC 60.036 55.000 7.97 0.00 0.00 3.27
4320 5037 0.252197 GATGTCCGGGCTACAAACCT 59.748 55.000 7.97 0.00 0.00 3.50
4321 5038 0.696501 ATGTCCGGGCTACAAACCTT 59.303 50.000 7.97 0.00 0.00 3.50
4322 5039 0.475044 TGTCCGGGCTACAAACCTTT 59.525 50.000 7.97 0.00 0.00 3.11
4323 5040 0.879090 GTCCGGGCTACAAACCTTTG 59.121 55.000 0.00 0.00 43.62 2.77
4324 5041 0.766131 TCCGGGCTACAAACCTTTGA 59.234 50.000 0.00 0.00 40.55 2.69
4325 5042 0.879090 CCGGGCTACAAACCTTTGAC 59.121 55.000 4.77 0.00 40.55 3.18
4326 5043 0.515564 CGGGCTACAAACCTTTGACG 59.484 55.000 4.77 0.00 40.55 4.35
4327 5044 0.240145 GGGCTACAAACCTTTGACGC 59.760 55.000 4.77 6.23 40.55 5.19
4328 5045 0.948678 GGCTACAAACCTTTGACGCA 59.051 50.000 4.77 0.00 40.55 5.24
4329 5046 1.334689 GGCTACAAACCTTTGACGCAC 60.335 52.381 4.77 0.00 40.55 5.34
4330 5047 1.659211 GCTACAAACCTTTGACGCACG 60.659 52.381 4.77 0.00 40.55 5.34
4331 5048 1.595794 CTACAAACCTTTGACGCACGT 59.404 47.619 4.77 0.00 40.55 4.49
4332 5049 0.806241 ACAAACCTTTGACGCACGTT 59.194 45.000 4.77 0.00 40.55 3.99
4333 5050 1.200484 ACAAACCTTTGACGCACGTTT 59.800 42.857 4.77 0.00 40.55 3.60
4334 5051 1.843753 CAAACCTTTGACGCACGTTTC 59.156 47.619 0.00 0.00 40.55 2.78
4335 5052 1.375551 AACCTTTGACGCACGTTTCT 58.624 45.000 0.00 0.00 0.00 2.52
4336 5053 1.375551 ACCTTTGACGCACGTTTCTT 58.624 45.000 0.00 0.00 0.00 2.52
4337 5054 1.063469 ACCTTTGACGCACGTTTCTTG 59.937 47.619 0.00 0.00 0.00 3.02
4338 5055 1.112459 CTTTGACGCACGTTTCTTGC 58.888 50.000 0.00 0.00 36.57 4.01
4339 5056 0.730265 TTTGACGCACGTTTCTTGCT 59.270 45.000 0.00 0.00 37.87 3.91
4340 5057 1.573026 TTGACGCACGTTTCTTGCTA 58.427 45.000 0.00 0.00 37.87 3.49
4341 5058 1.136690 TGACGCACGTTTCTTGCTAG 58.863 50.000 0.00 0.00 37.87 3.42
4342 5059 0.438830 GACGCACGTTTCTTGCTAGG 59.561 55.000 0.00 0.00 37.87 3.02
4343 5060 0.032952 ACGCACGTTTCTTGCTAGGA 59.967 50.000 0.00 0.00 37.87 2.94
4344 5061 1.337823 ACGCACGTTTCTTGCTAGGAT 60.338 47.619 0.00 0.00 37.87 3.24
4345 5062 1.732259 CGCACGTTTCTTGCTAGGATT 59.268 47.619 0.00 0.00 37.87 3.01
4346 5063 2.159627 CGCACGTTTCTTGCTAGGATTT 59.840 45.455 0.00 0.00 37.87 2.17
4347 5064 3.492313 GCACGTTTCTTGCTAGGATTTG 58.508 45.455 0.00 0.00 37.00 2.32
4348 5065 3.492313 CACGTTTCTTGCTAGGATTTGC 58.508 45.455 0.00 0.00 0.00 3.68
4349 5066 2.488153 ACGTTTCTTGCTAGGATTTGCC 59.512 45.455 0.00 0.00 0.00 4.52
4350 5067 2.487762 CGTTTCTTGCTAGGATTTGCCA 59.512 45.455 0.00 0.00 40.02 4.92
4351 5068 3.129287 CGTTTCTTGCTAGGATTTGCCAT 59.871 43.478 0.00 0.00 40.02 4.40
4352 5069 4.427312 GTTTCTTGCTAGGATTTGCCATG 58.573 43.478 0.00 0.00 40.02 3.66
4353 5070 3.370840 TCTTGCTAGGATTTGCCATGT 57.629 42.857 0.00 0.00 40.02 3.21
4354 5071 3.700538 TCTTGCTAGGATTTGCCATGTT 58.299 40.909 0.00 0.00 40.02 2.71
4355 5072 3.696051 TCTTGCTAGGATTTGCCATGTTC 59.304 43.478 0.00 0.00 40.02 3.18
4356 5073 3.084536 TGCTAGGATTTGCCATGTTCA 57.915 42.857 0.00 0.00 40.02 3.18
4357 5074 2.754552 TGCTAGGATTTGCCATGTTCAC 59.245 45.455 0.00 0.00 40.02 3.18
4358 5075 2.099756 GCTAGGATTTGCCATGTTCACC 59.900 50.000 0.00 0.00 40.02 4.02
4359 5076 1.560505 AGGATTTGCCATGTTCACCC 58.439 50.000 0.00 0.00 40.02 4.61
4360 5077 1.203162 AGGATTTGCCATGTTCACCCA 60.203 47.619 0.00 0.00 40.02 4.51
4361 5078 1.622811 GGATTTGCCATGTTCACCCAA 59.377 47.619 0.00 0.00 36.34 4.12
4362 5079 2.354003 GGATTTGCCATGTTCACCCAAG 60.354 50.000 0.00 0.00 36.34 3.61
4363 5080 1.047002 TTTGCCATGTTCACCCAAGG 58.953 50.000 0.00 0.00 0.00 3.61
4364 5081 0.187117 TTGCCATGTTCACCCAAGGA 59.813 50.000 0.00 0.00 0.00 3.36
4365 5082 0.187117 TGCCATGTTCACCCAAGGAA 59.813 50.000 0.00 0.00 0.00 3.36
4366 5083 1.337118 GCCATGTTCACCCAAGGAAA 58.663 50.000 0.00 0.00 0.00 3.13
4370 5087 3.328505 CATGTTCACCCAAGGAAATTGC 58.671 45.455 0.00 0.00 37.60 3.56
4375 5092 0.614812 ACCCAAGGAAATTGCCATGC 59.385 50.000 4.92 0.00 37.60 4.06
4385 5102 2.257286 ATTGCCATGCTCGCGACAAC 62.257 55.000 3.71 0.00 0.00 3.32
4394 5111 1.840141 GCTCGCGACAACATAATTTGC 59.160 47.619 3.71 0.00 0.00 3.68
4399 5116 3.510719 GCGACAACATAATTTGCCATGT 58.489 40.909 0.00 0.00 36.96 3.21
4402 5119 5.668376 GCGACAACATAATTTGCCATGTTTG 60.668 40.000 2.25 2.36 42.09 2.93
4403 5120 5.610235 ACAACATAATTTGCCATGTTTGC 57.390 34.783 2.25 0.00 42.09 3.68
4404 5121 5.307204 ACAACATAATTTGCCATGTTTGCT 58.693 33.333 2.25 0.00 42.09 3.91
4405 5122 5.179742 ACAACATAATTTGCCATGTTTGCTG 59.820 36.000 2.25 0.00 42.09 4.41
4407 5124 5.549347 ACATAATTTGCCATGTTTGCTGAA 58.451 33.333 0.00 0.00 31.32 3.02
4408 5125 5.409214 ACATAATTTGCCATGTTTGCTGAAC 59.591 36.000 0.00 0.00 38.78 3.18
4409 5126 1.850377 TTTGCCATGTTTGCTGAACG 58.150 45.000 0.00 0.00 41.29 3.95
4410 5127 1.028130 TTGCCATGTTTGCTGAACGA 58.972 45.000 0.00 0.00 41.29 3.85
4412 5129 1.406898 TGCCATGTTTGCTGAACGAAA 59.593 42.857 0.00 0.00 41.29 3.46
4413 5130 2.035704 TGCCATGTTTGCTGAACGAAAT 59.964 40.909 0.00 0.00 41.29 2.17
4415 5132 4.233789 GCCATGTTTGCTGAACGAAATTA 58.766 39.130 0.00 0.00 41.29 1.40
4416 5133 4.089923 GCCATGTTTGCTGAACGAAATTAC 59.910 41.667 0.00 0.00 41.29 1.89
4417 5134 4.621034 CCATGTTTGCTGAACGAAATTACC 59.379 41.667 0.00 0.00 41.29 2.85
4420 5137 5.218885 TGTTTGCTGAACGAAATTACCATG 58.781 37.500 0.00 0.00 41.29 3.66
4421 5138 3.485947 TGCTGAACGAAATTACCATGC 57.514 42.857 0.00 0.00 0.00 4.06
4423 5140 3.126858 TGCTGAACGAAATTACCATGCTC 59.873 43.478 0.00 0.00 0.00 4.26
4424 5141 3.785505 GCTGAACGAAATTACCATGCTCG 60.786 47.826 0.00 0.00 35.68 5.03
4425 5142 3.331150 TGAACGAAATTACCATGCTCGT 58.669 40.909 0.00 0.00 44.08 4.18
4426 5143 3.124466 TGAACGAAATTACCATGCTCGTG 59.876 43.478 0.27 0.00 41.56 4.35
4428 5145 2.671396 ACGAAATTACCATGCTCGTGAC 59.329 45.455 0.00 0.00 40.93 3.67
4429 5146 2.670905 CGAAATTACCATGCTCGTGACA 59.329 45.455 0.00 0.00 0.00 3.58
4430 5147 3.124466 CGAAATTACCATGCTCGTGACAA 59.876 43.478 0.00 0.00 0.00 3.18
4431 5148 4.403453 GAAATTACCATGCTCGTGACAAC 58.597 43.478 0.00 0.00 0.00 3.32
4432 5149 2.535012 TTACCATGCTCGTGACAACA 57.465 45.000 0.00 0.00 0.00 3.33
4433 5150 2.760634 TACCATGCTCGTGACAACAT 57.239 45.000 0.00 0.00 0.00 2.71
4434 5151 2.760634 ACCATGCTCGTGACAACATA 57.239 45.000 0.00 0.00 0.00 2.29
4435 5152 3.052455 ACCATGCTCGTGACAACATAA 57.948 42.857 0.00 0.00 0.00 1.90
4436 5153 3.609853 ACCATGCTCGTGACAACATAAT 58.390 40.909 0.00 0.00 0.00 1.28
4437 5154 4.009675 ACCATGCTCGTGACAACATAATT 58.990 39.130 0.00 0.00 0.00 1.40
4438 5155 4.458989 ACCATGCTCGTGACAACATAATTT 59.541 37.500 0.00 0.00 0.00 1.82
4439 5156 4.794762 CCATGCTCGTGACAACATAATTTG 59.205 41.667 0.00 0.00 0.00 2.32
4440 5157 3.820689 TGCTCGTGACAACATAATTTGC 58.179 40.909 0.00 0.00 0.00 3.68
4441 5158 3.171277 GCTCGTGACAACATAATTTGCC 58.829 45.455 0.00 0.00 0.00 4.52
4442 5159 3.365868 GCTCGTGACAACATAATTTGCCA 60.366 43.478 0.00 0.00 0.00 4.92
4443 5160 4.675146 GCTCGTGACAACATAATTTGCCAT 60.675 41.667 0.00 0.00 0.00 4.40
4444 5161 4.980590 TCGTGACAACATAATTTGCCATC 58.019 39.130 0.00 0.00 0.00 3.51
4445 5162 4.699735 TCGTGACAACATAATTTGCCATCT 59.300 37.500 0.00 0.00 0.00 2.90
4446 5163 5.030295 CGTGACAACATAATTTGCCATCTC 58.970 41.667 0.00 0.00 0.00 2.75
4447 5164 5.391843 CGTGACAACATAATTTGCCATCTCA 60.392 40.000 0.00 0.00 0.00 3.27
4448 5165 6.389091 GTGACAACATAATTTGCCATCTCAA 58.611 36.000 0.00 0.00 0.00 3.02
4449 5166 6.867816 GTGACAACATAATTTGCCATCTCAAA 59.132 34.615 0.00 0.00 39.87 2.69
4450 5167 6.867816 TGACAACATAATTTGCCATCTCAAAC 59.132 34.615 0.00 0.00 38.58 2.93
4451 5168 6.757237 ACAACATAATTTGCCATCTCAAACA 58.243 32.000 0.00 0.00 38.58 2.83
4452 5169 7.388437 ACAACATAATTTGCCATCTCAAACAT 58.612 30.769 0.00 0.00 38.58 2.71
4453 5170 8.530311 ACAACATAATTTGCCATCTCAAACATA 58.470 29.630 0.00 0.00 38.58 2.29
4454 5171 9.368674 CAACATAATTTGCCATCTCAAACATAA 57.631 29.630 0.00 0.00 38.58 1.90
4455 5172 9.590451 AACATAATTTGCCATCTCAAACATAAG 57.410 29.630 0.00 0.00 38.58 1.73
4456 5173 8.970020 ACATAATTTGCCATCTCAAACATAAGA 58.030 29.630 0.00 0.00 38.58 2.10
4457 5174 9.976511 CATAATTTGCCATCTCAAACATAAGAT 57.023 29.630 0.00 0.00 38.58 2.40
4460 5177 9.729281 AATTTGCCATCTCAAACATAAGATTTT 57.271 25.926 0.00 0.00 38.58 1.82
4461 5178 8.761575 TTTGCCATCTCAAACATAAGATTTTC 57.238 30.769 0.00 0.00 31.64 2.29
4462 5179 6.866480 TGCCATCTCAAACATAAGATTTTCC 58.134 36.000 0.00 0.00 29.77 3.13
4463 5180 6.127366 TGCCATCTCAAACATAAGATTTTCCC 60.127 38.462 0.00 0.00 29.77 3.97
4464 5181 6.097412 GCCATCTCAAACATAAGATTTTCCCT 59.903 38.462 0.00 0.00 29.77 4.20
4465 5182 7.486647 CCATCTCAAACATAAGATTTTCCCTG 58.513 38.462 0.00 0.00 29.77 4.45
4488 5205 4.094739 GCTGAAAAGCAAAATTGTTGTGGT 59.905 37.500 0.00 0.00 34.41 4.16
4491 5208 4.354071 AAAGCAAAATTGTTGTGGTTGC 57.646 36.364 1.38 1.38 43.83 4.17
4508 5225 3.540314 TTGCTGTGCAAGGACATTTTT 57.460 38.095 0.45 0.00 43.99 1.94
4509 5226 4.662468 TTGCTGTGCAAGGACATTTTTA 57.338 36.364 0.45 0.00 43.99 1.52
4510 5227 3.976169 TGCTGTGCAAGGACATTTTTAC 58.024 40.909 0.00 0.00 34.76 2.01
4511 5228 3.382865 TGCTGTGCAAGGACATTTTTACA 59.617 39.130 0.00 0.00 34.76 2.41
4512 5229 4.039004 TGCTGTGCAAGGACATTTTTACAT 59.961 37.500 0.00 0.00 34.76 2.29
4513 5230 4.622740 GCTGTGCAAGGACATTTTTACATC 59.377 41.667 0.00 0.00 0.00 3.06
4514 5231 5.771469 CTGTGCAAGGACATTTTTACATCA 58.229 37.500 0.00 0.00 0.00 3.07
4520 5237 7.224362 TGCAAGGACATTTTTACATCAAAGTTG 59.776 33.333 0.00 0.00 0.00 3.16
4524 5241 8.908903 AGGACATTTTTACATCAAAGTTGTACA 58.091 29.630 0.00 0.00 31.10 2.90
4532 5249 2.613506 AAAGTTGTACAGCGCGCCC 61.614 57.895 30.33 14.15 0.00 6.13
4546 5263 4.049393 GCCCGAATAGCAGCGAAT 57.951 55.556 0.00 0.00 0.00 3.34
4553 5270 1.869767 GAATAGCAGCGAATCCACCTG 59.130 52.381 0.00 0.00 0.00 4.00
4554 5271 1.123077 ATAGCAGCGAATCCACCTGA 58.877 50.000 0.00 0.00 0.00 3.86
4555 5272 0.461548 TAGCAGCGAATCCACCTGAG 59.538 55.000 0.00 0.00 0.00 3.35
4556 5273 1.817099 GCAGCGAATCCACCTGAGG 60.817 63.158 0.00 0.00 0.00 3.86
4557 5274 1.153289 CAGCGAATCCACCTGAGGG 60.153 63.158 2.38 0.00 38.88 4.30
4558 5275 2.514824 GCGAATCCACCTGAGGGC 60.515 66.667 2.38 0.00 35.63 5.19
4559 5276 3.036429 GCGAATCCACCTGAGGGCT 62.036 63.158 2.38 0.00 35.63 5.19
4560 5277 1.144936 CGAATCCACCTGAGGGCTC 59.855 63.158 2.38 0.00 35.63 4.70
4561 5278 1.617018 CGAATCCACCTGAGGGCTCA 61.617 60.000 2.38 0.00 38.06 4.26
4585 5302 3.935818 TCTCACTGTTAAACCAACCCA 57.064 42.857 0.00 0.00 36.20 4.51
4586 5303 3.815809 TCTCACTGTTAAACCAACCCAG 58.184 45.455 0.00 0.00 36.20 4.45
4587 5304 2.293399 CTCACTGTTAAACCAACCCAGC 59.707 50.000 0.00 0.00 36.20 4.85
4588 5305 2.028130 CACTGTTAAACCAACCCAGCA 58.972 47.619 0.00 0.00 36.20 4.41
4589 5306 2.028876 ACTGTTAAACCAACCCAGCAC 58.971 47.619 0.00 0.00 36.20 4.40
4598 5315 1.829533 AACCCAGCACCAGCAGTTG 60.830 57.895 0.00 0.00 45.49 3.16
4604 5321 1.673665 GCACCAGCAGTTGAGGGAG 60.674 63.158 0.00 0.00 41.58 4.30
4607 5324 1.140312 ACCAGCAGTTGAGGGAGAAA 58.860 50.000 0.00 0.00 0.00 2.52
4608 5325 1.072965 ACCAGCAGTTGAGGGAGAAAG 59.927 52.381 0.00 0.00 0.00 2.62
4609 5326 1.612726 CCAGCAGTTGAGGGAGAAAGG 60.613 57.143 0.00 0.00 0.00 3.11
4610 5327 0.037447 AGCAGTTGAGGGAGAAAGGC 59.963 55.000 0.00 0.00 0.00 4.35
4611 5328 0.250901 GCAGTTGAGGGAGAAAGGCA 60.251 55.000 0.00 0.00 0.00 4.75
4612 5329 1.615384 GCAGTTGAGGGAGAAAGGCAT 60.615 52.381 0.00 0.00 0.00 4.40
4613 5330 2.800250 CAGTTGAGGGAGAAAGGCATT 58.200 47.619 0.00 0.00 0.00 3.56
4614 5331 3.160269 CAGTTGAGGGAGAAAGGCATTT 58.840 45.455 0.00 0.00 0.00 2.32
4615 5332 3.575687 CAGTTGAGGGAGAAAGGCATTTT 59.424 43.478 0.00 0.00 0.00 1.82
4616 5333 4.039609 CAGTTGAGGGAGAAAGGCATTTTT 59.960 41.667 0.00 0.00 0.00 1.94
4617 5334 4.281941 AGTTGAGGGAGAAAGGCATTTTTC 59.718 41.667 5.86 5.86 37.34 2.29
4618 5335 2.819608 TGAGGGAGAAAGGCATTTTTCG 59.180 45.455 8.09 0.00 40.99 3.46
4619 5336 3.081804 GAGGGAGAAAGGCATTTTTCGA 58.918 45.455 8.09 0.00 40.99 3.71
4620 5337 3.696548 GAGGGAGAAAGGCATTTTTCGAT 59.303 43.478 8.09 0.00 40.99 3.59
4621 5338 4.855340 AGGGAGAAAGGCATTTTTCGATA 58.145 39.130 8.09 0.00 40.99 2.92
4622 5339 5.261216 AGGGAGAAAGGCATTTTTCGATAA 58.739 37.500 8.09 0.00 40.99 1.75
4623 5340 5.714806 AGGGAGAAAGGCATTTTTCGATAAA 59.285 36.000 8.09 3.47 40.99 1.40
4624 5341 6.036470 GGGAGAAAGGCATTTTTCGATAAAG 58.964 40.000 8.09 1.57 40.99 1.85
4625 5342 6.127730 GGGAGAAAGGCATTTTTCGATAAAGA 60.128 38.462 8.09 0.00 40.99 2.52
4626 5343 6.969473 GGAGAAAGGCATTTTTCGATAAAGAG 59.031 38.462 8.09 3.82 40.99 2.85
4627 5344 6.856895 AGAAAGGCATTTTTCGATAAAGAGG 58.143 36.000 7.13 1.34 40.99 3.69
4628 5345 5.582689 AAGGCATTTTTCGATAAAGAGGG 57.417 39.130 7.13 0.00 0.00 4.30
4629 5346 4.855340 AGGCATTTTTCGATAAAGAGGGA 58.145 39.130 7.13 0.00 0.00 4.20
4630 5347 4.884164 AGGCATTTTTCGATAAAGAGGGAG 59.116 41.667 7.13 0.00 0.00 4.30
4634 5351 6.969473 GCATTTTTCGATAAAGAGGGAGAAAG 59.031 38.462 7.13 0.00 0.00 2.62
4697 5414 2.292103 ACAAACCAATGCACACACAC 57.708 45.000 0.00 0.00 0.00 3.82
4698 5415 1.547820 ACAAACCAATGCACACACACA 59.452 42.857 0.00 0.00 0.00 3.72
4699 5416 1.925847 CAAACCAATGCACACACACAC 59.074 47.619 0.00 0.00 0.00 3.82
4700 5417 0.459489 AACCAATGCACACACACACC 59.541 50.000 0.00 0.00 0.00 4.16
4708 5425 1.377987 ACACACACACCCACACACC 60.378 57.895 0.00 0.00 0.00 4.16
4824 5542 9.442047 GTACAATATGAGCATCCTAAAGCTAAT 57.558 33.333 0.00 0.00 42.04 1.73
4845 5567 1.174783 CTACAGCACTGTCCTACCGT 58.825 55.000 6.56 0.00 43.74 4.83
4846 5568 1.544691 CTACAGCACTGTCCTACCGTT 59.455 52.381 6.56 0.00 43.74 4.44
4858 5580 1.479021 CCTACCGTTCCCAAACCCAAA 60.479 52.381 0.00 0.00 31.27 3.28
4869 5591 0.762842 AAACCCAAACCCCAGAAGCC 60.763 55.000 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.166829 TCGCCACTAATTGCACCAATT 58.833 42.857 8.11 8.11 44.74 2.32
64 65 1.293498 CACGGCTACAAGCAGGACT 59.707 57.895 4.16 0.00 44.75 3.85
87 100 0.826062 TGATGATCTCGGCTGAGCAA 59.174 50.000 18.28 1.57 42.26 3.91
93 106 0.179073 CCGGTTTGATGATCTCGGCT 60.179 55.000 0.00 0.00 0.00 5.52
104 117 1.002624 GAGGTGATGGCCGGTTTGA 60.003 57.895 1.90 0.00 0.00 2.69
105 118 2.398554 CGAGGTGATGGCCGGTTTG 61.399 63.158 1.90 0.00 0.00 2.93
106 119 2.046314 CGAGGTGATGGCCGGTTT 60.046 61.111 1.90 0.00 0.00 3.27
113 126 2.184322 CCGTGACCGAGGTGATGG 59.816 66.667 5.61 5.61 35.63 3.51
128 141 1.476007 CCTAATCCTGCCTCCTCCCG 61.476 65.000 0.00 0.00 0.00 5.14
132 145 3.994000 GGCCTAATCCTGCCTCCT 58.006 61.111 0.00 0.00 44.46 3.69
167 184 0.898320 CCTGCTGCTACAGTACACCT 59.102 55.000 0.00 0.00 35.83 4.00
168 185 0.895530 TCCTGCTGCTACAGTACACC 59.104 55.000 0.00 0.00 35.83 4.16
169 186 1.272490 TGTCCTGCTGCTACAGTACAC 59.728 52.381 0.00 0.00 35.83 2.90
174 191 1.736126 CACAATGTCCTGCTGCTACAG 59.264 52.381 0.00 0.09 37.42 2.74
200 217 4.347453 CACGCAGGCTTTGGGCAC 62.347 66.667 5.89 0.00 43.14 5.01
244 262 2.590575 ACAAACCCAGGCACGTCG 60.591 61.111 0.00 0.00 0.00 5.12
246 264 1.227853 GAGACAAACCCAGGCACGT 60.228 57.895 0.00 0.00 0.00 4.49
267 286 2.111878 GGCATCATCGACCCAGGG 59.888 66.667 2.85 2.85 0.00 4.45
271 290 1.449601 ACAACGGCATCATCGACCC 60.450 57.895 0.00 0.00 0.00 4.46
281 300 1.029408 ACTTGAGTTGCACAACGGCA 61.029 50.000 7.81 7.73 45.50 5.69
287 306 0.465460 GGGTGGACTTGAGTTGCACA 60.465 55.000 0.00 0.00 0.00 4.57
297 316 4.619227 CACGTGCGGGGTGGACTT 62.619 66.667 0.82 0.00 36.65 3.01
312 331 2.685897 ACCATACTCTCTTCTCGCTCAC 59.314 50.000 0.00 0.00 0.00 3.51
349 368 1.134075 CTCGTAGTCACCACCGTCG 59.866 63.158 0.00 0.00 0.00 5.12
354 373 4.573162 GGTGCTCGTAGTCACCAC 57.427 61.111 15.99 0.00 45.76 4.16
363 382 1.476085 CTCTCTCATTCTGGTGCTCGT 59.524 52.381 0.00 0.00 0.00 4.18
377 396 3.876309 ATACACCTCTCCCTCTCTCTC 57.124 52.381 0.00 0.00 0.00 3.20
378 397 5.451354 GTTTATACACCTCTCCCTCTCTCT 58.549 45.833 0.00 0.00 0.00 3.10
414 433 1.202879 AGGACCAAAACGGATGCAAGA 60.203 47.619 0.00 0.00 38.63 3.02
418 437 1.534729 AGAAGGACCAAAACGGATGC 58.465 50.000 0.00 0.00 38.63 3.91
423 442 6.792326 AGAAAGTAAAAGAAGGACCAAAACG 58.208 36.000 0.00 0.00 0.00 3.60
453 472 7.881775 GTGATATACACTTTGAGGGGAAAAT 57.118 36.000 0.00 0.00 45.13 1.82
480 500 2.399396 AACGAGTTGCCGATTTGTTG 57.601 45.000 0.00 0.00 0.00 3.33
510 533 6.860023 GTGTATGTGGGTATCTACGATTGTAC 59.140 42.308 0.00 0.00 0.00 2.90
524 547 3.368013 CGAGTGTATGTGTGTATGTGGGT 60.368 47.826 0.00 0.00 0.00 4.51
532 555 1.618837 AGAAGGCGAGTGTATGTGTGT 59.381 47.619 0.00 0.00 0.00 3.72
546 569 1.086696 TGCGTGCTTTCATAGAAGGC 58.913 50.000 6.88 6.88 42.57 4.35
549 572 0.442310 GCGTGCGTGCTTTCATAGAA 59.558 50.000 0.00 0.00 0.00 2.10
550 573 0.669012 TGCGTGCGTGCTTTCATAGA 60.669 50.000 1.52 0.00 35.36 1.98
570 593 1.112916 TTCCTGTCGACTGTGAGGCA 61.113 55.000 17.92 2.30 0.00 4.75
576 599 1.546476 GGAGATGTTCCTGTCGACTGT 59.454 52.381 17.92 0.00 43.16 3.55
577 600 2.285827 GGAGATGTTCCTGTCGACTG 57.714 55.000 17.92 16.32 43.16 3.51
591 614 1.577736 CTGGTTCAGTGGGAGGAGAT 58.422 55.000 0.00 0.00 0.00 2.75
604 627 2.485814 GACTCCTCAACAATGCTGGTTC 59.514 50.000 0.00 0.00 0.00 3.62
608 631 3.049708 TCAGACTCCTCAACAATGCTG 57.950 47.619 0.00 0.00 0.00 4.41
683 706 6.204882 AGAGGGTAATTCTTTGAAGTGAAACG 59.795 38.462 0.00 0.00 45.86 3.60
708 745 0.801872 CCACATTTGATTCGGCGACA 59.198 50.000 10.16 1.63 0.00 4.35
709 746 0.802494 ACCACATTTGATTCGGCGAC 59.198 50.000 10.16 0.00 0.00 5.19
795 832 5.231568 GCTGACATCTGAAGCAAATTAATGC 59.768 40.000 0.00 0.00 46.78 3.56
822 1227 0.647410 CATCGCAAGCAAGTCCTACG 59.353 55.000 0.00 0.00 37.18 3.51
898 1303 2.536365 TGATCGCCGTTGATTGACTAC 58.464 47.619 0.00 0.00 0.00 2.73
901 1306 1.526986 CGTTGATCGCCGTTGATTGAC 60.527 52.381 0.00 0.00 0.00 3.18
921 1327 3.442100 CGAACGACCTGGTTATTAGTCC 58.558 50.000 0.00 0.00 0.00 3.85
939 1345 1.332144 CGGGGGACTCCATTACCGAA 61.332 60.000 12.03 0.00 43.69 4.30
943 1349 0.398948 TACCCGGGGGACTCCATTAC 60.399 60.000 27.92 0.00 38.96 1.89
964 1370 3.565214 TGTGGCCGTGTGGTGGAT 61.565 61.111 0.00 0.00 37.67 3.41
965 1371 4.555709 GTGTGGCCGTGTGGTGGA 62.556 66.667 0.00 0.00 37.67 4.02
968 1374 4.102815 TGTGTGTGGCCGTGTGGT 62.103 61.111 0.00 0.00 37.67 4.16
988 1395 2.107141 CCTCGAATCTGACGGGGC 59.893 66.667 0.00 0.00 44.34 5.80
994 1401 0.324738 AGAGTGGGCCTCGAATCTGA 60.325 55.000 4.53 0.00 45.44 3.27
998 1405 2.066999 GGGAGAGTGGGCCTCGAAT 61.067 63.158 4.53 0.00 45.44 3.34
999 1406 2.683933 GGGAGAGTGGGCCTCGAA 60.684 66.667 4.53 0.00 45.44 3.71
1217 1631 4.641989 CGAGGTGAAATTTCATTCCAGGAT 59.358 41.667 23.05 5.72 39.73 3.24
1218 1632 4.009675 CGAGGTGAAATTTCATTCCAGGA 58.990 43.478 23.05 0.00 39.73 3.86
1222 1636 2.477863 CGGCGAGGTGAAATTTCATTCC 60.478 50.000 23.05 19.39 39.73 3.01
1224 1638 2.159382 ACGGCGAGGTGAAATTTCATT 58.841 42.857 23.05 14.71 39.73 2.57
1226 1640 1.153353 GACGGCGAGGTGAAATTTCA 58.847 50.000 16.91 16.91 34.20 2.69
1227 1641 0.446616 GGACGGCGAGGTGAAATTTC 59.553 55.000 16.62 11.41 0.00 2.17
1228 1642 0.036306 AGGACGGCGAGGTGAAATTT 59.964 50.000 16.62 0.00 0.00 1.82
1244 1658 3.249189 ACAGCTTTCGCCCCAGGA 61.249 61.111 0.00 0.00 36.60 3.86
1271 1685 1.202651 AGAAGTGACAGAAACCACCCG 60.203 52.381 0.00 0.00 34.00 5.28
1296 1710 0.955428 GCTGAAATCAGGGTGTCGCA 60.955 55.000 12.09 0.00 43.94 5.10
1299 1713 1.808945 CACTGCTGAAATCAGGGTGTC 59.191 52.381 12.09 0.00 43.94 3.67
1304 1718 1.250328 TTGCCACTGCTGAAATCAGG 58.750 50.000 12.09 0.00 43.94 3.86
1328 1761 2.897969 TCCAGAGTCACCCAAGAAGTAC 59.102 50.000 0.00 0.00 0.00 2.73
1330 1763 1.694696 GTCCAGAGTCACCCAAGAAGT 59.305 52.381 0.00 0.00 0.00 3.01
1331 1764 1.337260 CGTCCAGAGTCACCCAAGAAG 60.337 57.143 0.00 0.00 0.00 2.85
1332 1765 0.679505 CGTCCAGAGTCACCCAAGAA 59.320 55.000 0.00 0.00 0.00 2.52
1333 1766 1.816863 GCGTCCAGAGTCACCCAAGA 61.817 60.000 0.00 0.00 0.00 3.02
1334 1767 1.374758 GCGTCCAGAGTCACCCAAG 60.375 63.158 0.00 0.00 0.00 3.61
1335 1768 2.741092 GCGTCCAGAGTCACCCAA 59.259 61.111 0.00 0.00 0.00 4.12
1336 1769 3.680786 CGCGTCCAGAGTCACCCA 61.681 66.667 0.00 0.00 0.00 4.51
1337 1770 4.436998 CCGCGTCCAGAGTCACCC 62.437 72.222 4.92 0.00 0.00 4.61
1339 1772 3.973267 GAGCCGCGTCCAGAGTCAC 62.973 68.421 4.92 0.00 0.00 3.67
1340 1773 3.749064 GAGCCGCGTCCAGAGTCA 61.749 66.667 4.92 0.00 0.00 3.41
1341 1774 3.069980 ATGAGCCGCGTCCAGAGTC 62.070 63.158 4.92 0.00 0.00 3.36
1402 1842 4.646492 GCCACACTCAAATCCAAATCCTAT 59.354 41.667 0.00 0.00 0.00 2.57
1448 1888 9.421806 CCAACATTTCAATGAAAACTAAGCATA 57.578 29.630 12.75 0.00 39.67 3.14
1449 1889 7.388500 CCCAACATTTCAATGAAAACTAAGCAT 59.612 33.333 12.75 0.00 39.67 3.79
1450 1890 6.705381 CCCAACATTTCAATGAAAACTAAGCA 59.295 34.615 12.75 0.00 39.67 3.91
1451 1891 6.928492 TCCCAACATTTCAATGAAAACTAAGC 59.072 34.615 12.75 0.00 39.67 3.09
1452 1892 8.143835 AGTCCCAACATTTCAATGAAAACTAAG 58.856 33.333 12.75 2.52 39.67 2.18
1453 1893 8.017418 AGTCCCAACATTTCAATGAAAACTAA 57.983 30.769 12.75 0.00 39.67 2.24
1454 1894 7.595819 AGTCCCAACATTTCAATGAAAACTA 57.404 32.000 12.75 0.00 39.67 2.24
1455 1895 6.484364 AGTCCCAACATTTCAATGAAAACT 57.516 33.333 12.75 6.81 39.67 2.66
1457 1897 8.306038 CAGATAGTCCCAACATTTCAATGAAAA 58.694 33.333 12.75 0.00 39.67 2.29
1462 1902 7.451255 TGTTTCAGATAGTCCCAACATTTCAAT 59.549 33.333 0.00 0.00 0.00 2.57
1516 1963 5.404946 CAGCCATATTTGTGAGGTGAAAAG 58.595 41.667 0.00 0.00 0.00 2.27
1606 2261 4.081322 AGGTCGACCTACACAACAATTT 57.919 40.909 35.59 6.84 46.48 1.82
1679 2343 2.030562 GCCCTGTACACGCACTGT 59.969 61.111 5.49 0.00 36.82 3.55
1680 2344 0.955428 ATTGCCCTGTACACGCACTG 60.955 55.000 11.50 0.00 30.84 3.66
1682 2346 0.109781 CAATTGCCCTGTACACGCAC 60.110 55.000 11.50 0.00 30.84 5.34
1683 2347 0.536233 ACAATTGCCCTGTACACGCA 60.536 50.000 5.05 8.47 0.00 5.24
1684 2348 0.596082 AACAATTGCCCTGTACACGC 59.404 50.000 5.05 0.00 0.00 5.34
1685 2349 2.034053 ACAAACAATTGCCCTGTACACG 59.966 45.455 5.05 0.00 40.34 4.49
1686 2350 3.726291 ACAAACAATTGCCCTGTACAC 57.274 42.857 5.05 0.00 40.34 2.90
1687 2351 5.854010 TTAACAAACAATTGCCCTGTACA 57.146 34.783 5.05 0.00 40.34 2.90
1688 2352 6.926272 TGATTTAACAAACAATTGCCCTGTAC 59.074 34.615 5.05 0.00 40.34 2.90
1689 2353 7.055667 TGATTTAACAAACAATTGCCCTGTA 57.944 32.000 5.05 0.00 40.34 2.74
1690 2354 5.923204 TGATTTAACAAACAATTGCCCTGT 58.077 33.333 5.05 3.62 40.34 4.00
1691 2355 8.605746 CATATGATTTAACAAACAATTGCCCTG 58.394 33.333 5.05 2.95 40.34 4.45
1694 2358 8.934825 ACACATATGATTTAACAAACAATTGCC 58.065 29.630 10.38 0.00 40.34 4.52
1695 2359 9.743937 CACACATATGATTTAACAAACAATTGC 57.256 29.630 10.38 0.00 40.34 3.56
1699 2363 7.382110 CCCCACACATATGATTTAACAAACAA 58.618 34.615 10.38 0.00 0.00 2.83
1700 2364 6.573289 GCCCCACACATATGATTTAACAAACA 60.573 38.462 10.38 0.00 0.00 2.83
1701 2365 5.810074 GCCCCACACATATGATTTAACAAAC 59.190 40.000 10.38 0.00 0.00 2.93
1702 2366 5.719085 AGCCCCACACATATGATTTAACAAA 59.281 36.000 10.38 0.00 0.00 2.83
1703 2367 5.268387 AGCCCCACACATATGATTTAACAA 58.732 37.500 10.38 0.00 0.00 2.83
1719 2393 1.265454 ACCAGTGCTAGTAGCCCCAC 61.265 60.000 19.41 10.96 41.51 4.61
1731 2405 3.064271 TGTTCGTTGTTCTTTACCAGTGC 59.936 43.478 0.00 0.00 0.00 4.40
1736 2410 4.497966 GCAACTTGTTCGTTGTTCTTTACC 59.502 41.667 5.68 0.00 44.61 2.85
1737 2411 4.201558 CGCAACTTGTTCGTTGTTCTTTAC 59.798 41.667 5.68 0.00 44.61 2.01
1738 2412 4.142859 ACGCAACTTGTTCGTTGTTCTTTA 60.143 37.500 5.68 0.00 44.61 1.85
1791 2482 7.370383 CAGTAGGCACAAGAATGTTTAATTGT 58.630 34.615 0.00 0.00 37.82 2.71
1810 2501 1.049289 GGTCCCCTGTAGGCAGTAGG 61.049 65.000 0.00 0.00 41.02 3.18
1811 2502 0.032017 AGGTCCCCTGTAGGCAGTAG 60.032 60.000 0.00 0.00 41.02 2.57
1812 2503 0.325296 CAGGTCCCCTGTAGGCAGTA 60.325 60.000 1.99 0.00 45.82 2.74
1813 2504 1.613630 CAGGTCCCCTGTAGGCAGT 60.614 63.158 1.99 0.00 45.82 4.40
1843 2534 0.613292 GAGTCACCAGGCCTCTCTGA 60.613 60.000 0.00 0.00 36.93 3.27
1871 2562 6.952358 AGGTGACAGACTTAGTTTGGATAGTA 59.048 38.462 7.79 0.00 0.00 1.82
1886 2579 0.891373 TCTAGCAGCAGGTGACAGAC 59.109 55.000 3.02 0.00 0.00 3.51
1888 2581 2.277969 CAATCTAGCAGCAGGTGACAG 58.722 52.381 3.02 0.00 0.00 3.51
1891 2584 1.625315 ACACAATCTAGCAGCAGGTGA 59.375 47.619 3.02 0.00 0.00 4.02
1910 2603 7.281999 CAGAAAATCCCAATCTTTCTCCTCTAC 59.718 40.741 0.00 0.00 37.31 2.59
1915 2608 6.659242 TGTACAGAAAATCCCAATCTTTCTCC 59.341 38.462 0.00 0.00 37.31 3.71
1958 2651 4.547532 GCTGATGCATTTCTCATTCCATC 58.452 43.478 0.00 0.00 39.41 3.51
1961 2654 2.287427 CGGCTGATGCATTTCTCATTCC 60.287 50.000 0.00 0.00 41.91 3.01
1963 2656 2.372264 ACGGCTGATGCATTTCTCATT 58.628 42.857 0.00 0.00 41.91 2.57
1982 2675 2.552231 AATGGTCAGGCGCCCCTAAC 62.552 60.000 26.15 15.94 40.33 2.34
1984 2677 2.265467 GAAATGGTCAGGCGCCCCTA 62.265 60.000 26.15 10.13 40.33 3.53
2058 2751 2.388310 TGACGAAAACCATCGCCATA 57.612 45.000 0.00 0.00 46.51 2.74
2187 2880 1.497286 ACAACCCAACCAGGCTTAGAA 59.503 47.619 0.00 0.00 35.39 2.10
2281 2974 5.301298 GCCATGCTGAGATCTTTCCTTTTAT 59.699 40.000 0.00 0.00 0.00 1.40
2327 3020 9.926158 ACATTTGCATTATAGAAAATTGACACA 57.074 25.926 0.00 0.00 0.00 3.72
2465 3158 4.881920 ACATTTTTACCTGTGTTGATGGC 58.118 39.130 0.00 0.00 0.00 4.40
2600 3294 3.425193 GCGACACCTAAAACAATTTGCAG 59.575 43.478 0.00 0.00 0.00 4.41
2627 3321 1.298859 CTAAGGCGGTGCAGACAACC 61.299 60.000 0.00 0.00 0.00 3.77
2648 3342 0.317269 CAAGTGCTGCAACAAGGACG 60.317 55.000 2.77 0.00 42.80 4.79
2807 3505 5.582269 CACCAGAATCAAATACATCGTCTGT 59.418 40.000 0.00 0.00 42.13 3.41
2879 3577 8.846943 ATGGAATCGACAATATGCTGTTATAA 57.153 30.769 0.00 0.00 0.00 0.98
2939 3637 3.245052 ACAGAACTGAAAGAGAATGGGGG 60.245 47.826 8.87 0.00 37.43 5.40
2983 3681 9.936329 ATGAAGTTTGATAAACCTATACCCATT 57.064 29.630 1.14 0.00 42.34 3.16
3007 3705 8.277490 AGATTGCCATCTTATATGTGCTAATG 57.723 34.615 0.00 0.00 36.18 1.90
3033 3731 2.035321 GGGATCCGAACAAAGCACAAAA 59.965 45.455 5.45 0.00 0.00 2.44
3048 3746 2.708325 AGTCATGAGCTAAAGGGGATCC 59.292 50.000 1.92 1.92 0.00 3.36
3076 3774 7.232330 TCTGATCTAGAATCCTAGTGTGAATGG 59.768 40.741 0.00 0.00 42.33 3.16
3147 3846 4.514816 TCTGATGCAGAAACAAACGATCAA 59.485 37.500 0.00 0.00 37.57 2.57
3258 3957 3.809832 CGATACCCATCACCAGTGAAATC 59.190 47.826 4.31 3.30 43.58 2.17
3279 3978 5.390885 CCAGAACATGGTGTAATTGAGAACG 60.391 44.000 0.00 0.00 44.91 3.95
3373 4072 6.721704 AAGCACATCATAGACTGATAGACA 57.278 37.500 0.00 0.00 42.91 3.41
3469 4170 4.101448 GACGCCTCCCAGCACCAT 62.101 66.667 0.00 0.00 0.00 3.55
3549 4250 1.693467 TCTGCGTGTACTTTGCGTAG 58.307 50.000 0.00 3.33 39.14 3.51
3787 4495 5.064198 GCTGATAAACACACGGTGCTATTTA 59.936 40.000 8.30 10.59 36.98 1.40
3837 4545 6.928348 TTACAGTTACTTGATTCCCTGAGA 57.072 37.500 0.00 0.00 0.00 3.27
3841 4549 6.659242 CCAACATTACAGTTACTTGATTCCCT 59.341 38.462 0.00 0.00 0.00 4.20
3904 4612 7.826252 ACTGATAATCTTGCAAGTACAACTGAT 59.174 33.333 25.19 7.02 0.00 2.90
3916 4624 5.417580 GGTAAAACCCACTGATAATCTTGCA 59.582 40.000 0.00 0.00 30.04 4.08
4014 4722 2.617276 CCATCCACAGAGCTCACATGTT 60.617 50.000 17.77 0.00 0.00 2.71
4019 4727 0.107312 ATGCCATCCACAGAGCTCAC 60.107 55.000 17.77 0.00 0.00 3.51
4036 4749 4.090354 GGCATTTTGACAACATCGTTCATG 59.910 41.667 0.00 0.00 38.64 3.07
4062 4775 1.277842 TGCTATCTTTGCCCAGAACGA 59.722 47.619 0.00 0.00 0.00 3.85
4066 4779 2.094675 GCTTTGCTATCTTTGCCCAGA 58.905 47.619 0.00 0.00 0.00 3.86
4090 4807 2.878406 TCAGTGTAGCAAAAGGTGAAGC 59.122 45.455 0.00 0.00 0.00 3.86
4095 4812 4.082571 GCAATCATCAGTGTAGCAAAAGGT 60.083 41.667 0.00 0.00 0.00 3.50
4097 4814 5.050644 TGCAATCATCAGTGTAGCAAAAG 57.949 39.130 0.00 0.00 0.00 2.27
4102 4819 3.273434 TCCTTGCAATCATCAGTGTAGC 58.727 45.455 0.00 0.00 0.00 3.58
4104 4821 4.637091 CACATCCTTGCAATCATCAGTGTA 59.363 41.667 0.00 0.00 0.00 2.90
4109 4826 4.157105 CAGAACACATCCTTGCAATCATCA 59.843 41.667 0.00 0.00 0.00 3.07
4110 4827 4.397103 TCAGAACACATCCTTGCAATCATC 59.603 41.667 0.00 0.00 0.00 2.92
4111 4828 4.338012 TCAGAACACATCCTTGCAATCAT 58.662 39.130 0.00 0.00 0.00 2.45
4119 4836 6.040166 GCCATAAATGATCAGAACACATCCTT 59.960 38.462 0.09 0.00 0.00 3.36
4125 4842 5.220931 GGACAGCCATAAATGATCAGAACAC 60.221 44.000 0.09 0.00 0.00 3.32
4147 4864 1.001393 GAACCTGGCGGAAATGGGA 60.001 57.895 0.00 0.00 0.00 4.37
4148 4865 2.406616 CGAACCTGGCGGAAATGGG 61.407 63.158 0.00 0.00 0.00 4.00
4149 4866 1.674322 ACGAACCTGGCGGAAATGG 60.674 57.895 0.00 0.00 0.00 3.16
4150 4867 1.501741 CACGAACCTGGCGGAAATG 59.498 57.895 0.00 0.00 0.00 2.32
4151 4868 2.332654 GCACGAACCTGGCGGAAAT 61.333 57.895 0.00 0.00 0.00 2.17
4152 4869 2.975799 GCACGAACCTGGCGGAAA 60.976 61.111 0.00 0.00 0.00 3.13
4153 4870 3.545124 ATGCACGAACCTGGCGGAA 62.545 57.895 0.00 0.00 0.00 4.30
4154 4871 4.015406 ATGCACGAACCTGGCGGA 62.015 61.111 0.00 0.00 0.00 5.54
4155 4872 3.803082 CATGCACGAACCTGGCGG 61.803 66.667 0.00 0.00 0.00 6.13
4156 4873 3.049674 ACATGCACGAACCTGGCG 61.050 61.111 0.00 0.00 0.00 5.69
4157 4874 1.514678 TTCACATGCACGAACCTGGC 61.515 55.000 0.00 0.00 0.00 4.85
4158 4875 0.238289 GTTCACATGCACGAACCTGG 59.762 55.000 12.33 0.00 36.36 4.45
4159 4876 1.195448 GAGTTCACATGCACGAACCTG 59.805 52.381 17.40 2.04 42.00 4.00
4160 4877 1.512926 GAGTTCACATGCACGAACCT 58.487 50.000 17.40 8.59 42.00 3.50
4161 4878 0.517316 GGAGTTCACATGCACGAACC 59.483 55.000 17.40 11.21 42.00 3.62
4162 4879 1.195448 CAGGAGTTCACATGCACGAAC 59.805 52.381 14.58 14.58 41.48 3.95
4163 4880 1.511850 CAGGAGTTCACATGCACGAA 58.488 50.000 0.00 0.00 0.00 3.85
4164 4881 0.320683 CCAGGAGTTCACATGCACGA 60.321 55.000 0.00 0.00 0.00 4.35
4165 4882 1.915614 GCCAGGAGTTCACATGCACG 61.916 60.000 0.00 0.00 0.00 5.34
4166 4883 0.607489 AGCCAGGAGTTCACATGCAC 60.607 55.000 0.00 0.00 0.00 4.57
4167 4884 0.111061 AAGCCAGGAGTTCACATGCA 59.889 50.000 0.00 0.00 0.00 3.96
4168 4885 2.113860 TAAGCCAGGAGTTCACATGC 57.886 50.000 0.00 0.00 0.00 4.06
4169 4886 2.357009 GCATAAGCCAGGAGTTCACATG 59.643 50.000 0.00 0.00 33.58 3.21
4170 4887 2.240667 AGCATAAGCCAGGAGTTCACAT 59.759 45.455 0.00 0.00 43.56 3.21
4171 4888 1.630369 AGCATAAGCCAGGAGTTCACA 59.370 47.619 0.00 0.00 43.56 3.58
4172 4889 2.409948 AGCATAAGCCAGGAGTTCAC 57.590 50.000 0.00 0.00 43.56 3.18
4173 4890 3.084039 CAAAGCATAAGCCAGGAGTTCA 58.916 45.455 0.00 0.00 43.56 3.18
4174 4891 3.084786 ACAAAGCATAAGCCAGGAGTTC 58.915 45.455 0.00 0.00 43.56 3.01
4175 4892 2.821969 CACAAAGCATAAGCCAGGAGTT 59.178 45.455 0.00 0.00 43.56 3.01
4176 4893 2.440409 CACAAAGCATAAGCCAGGAGT 58.560 47.619 0.00 0.00 43.56 3.85
4179 4896 0.174162 GCCACAAAGCATAAGCCAGG 59.826 55.000 0.00 0.00 43.56 4.45
4187 4904 3.920231 TCAGAGATAGCCACAAAGCAT 57.080 42.857 0.00 0.00 34.23 3.79
4205 4922 2.905415 AGGTTTGGCCAATCTCATCA 57.095 45.000 21.26 0.00 40.61 3.07
4214 4931 2.738587 TCAAGTGTAAGGTTTGGCCA 57.261 45.000 0.00 0.00 40.61 5.36
4218 4935 6.348540 GGTGAGCTTATCAAGTGTAAGGTTTG 60.349 42.308 0.00 0.00 40.43 2.93
4236 4953 0.963856 TACGACGTCCATGGTGAGCT 60.964 55.000 12.58 0.00 0.00 4.09
4259 4976 2.000447 GTGACGTCAGATTTGTAGCCC 59.000 52.381 20.73 0.00 0.00 5.19
4268 4985 3.262420 GCCTACAAATGTGACGTCAGAT 58.738 45.455 21.50 21.50 0.00 2.90
4271 4988 2.535012 TGCCTACAAATGTGACGTCA 57.465 45.000 15.76 15.76 0.00 4.35
4274 4991 1.202177 GCCATGCCTACAAATGTGACG 60.202 52.381 0.00 0.00 0.00 4.35
4275 4992 1.818060 TGCCATGCCTACAAATGTGAC 59.182 47.619 0.00 0.00 0.00 3.67
4276 4993 2.212812 TGCCATGCCTACAAATGTGA 57.787 45.000 0.00 0.00 0.00 3.58
4277 4994 3.316071 TTTGCCATGCCTACAAATGTG 57.684 42.857 0.00 0.00 0.00 3.21
4278 4995 5.363292 TCATATTTGCCATGCCTACAAATGT 59.637 36.000 17.38 11.72 42.38 2.71
4279 4996 5.845103 TCATATTTGCCATGCCTACAAATG 58.155 37.500 17.38 8.84 42.38 2.32
4280 4997 6.042322 ACATCATATTTGCCATGCCTACAAAT 59.958 34.615 14.50 14.50 44.09 2.32
4281 4998 5.363292 ACATCATATTTGCCATGCCTACAAA 59.637 36.000 4.59 4.59 37.66 2.83
4282 4999 4.894705 ACATCATATTTGCCATGCCTACAA 59.105 37.500 0.00 0.00 0.00 2.41
4283 5000 4.472496 ACATCATATTTGCCATGCCTACA 58.528 39.130 0.00 0.00 0.00 2.74
4284 5001 4.082571 GGACATCATATTTGCCATGCCTAC 60.083 45.833 0.00 0.00 0.00 3.18
4285 5002 4.081406 GGACATCATATTTGCCATGCCTA 58.919 43.478 0.00 0.00 0.00 3.93
4286 5003 2.895404 GGACATCATATTTGCCATGCCT 59.105 45.455 0.00 0.00 0.00 4.75
4287 5004 2.352030 CGGACATCATATTTGCCATGCC 60.352 50.000 0.00 0.00 0.00 4.40
4288 5005 2.352030 CCGGACATCATATTTGCCATGC 60.352 50.000 0.00 0.00 0.00 4.06
4289 5006 2.229543 CCCGGACATCATATTTGCCATG 59.770 50.000 0.73 0.00 0.00 3.66
4290 5007 2.517959 CCCGGACATCATATTTGCCAT 58.482 47.619 0.73 0.00 0.00 4.40
4291 5008 1.979855 CCCGGACATCATATTTGCCA 58.020 50.000 0.73 0.00 0.00 4.92
4292 5009 0.598065 GCCCGGACATCATATTTGCC 59.402 55.000 0.73 0.00 0.00 4.52
4293 5010 1.609208 AGCCCGGACATCATATTTGC 58.391 50.000 0.73 0.00 0.00 3.68
4294 5011 3.738982 TGTAGCCCGGACATCATATTTG 58.261 45.455 0.73 0.00 0.00 2.32
4295 5012 4.431416 TTGTAGCCCGGACATCATATTT 57.569 40.909 0.73 0.00 0.00 1.40
4296 5013 4.134563 GTTTGTAGCCCGGACATCATATT 58.865 43.478 0.73 0.00 0.00 1.28
4297 5014 3.496160 GGTTTGTAGCCCGGACATCATAT 60.496 47.826 0.73 0.00 0.00 1.78
4298 5015 2.158871 GGTTTGTAGCCCGGACATCATA 60.159 50.000 0.73 0.00 0.00 2.15
4299 5016 1.408266 GGTTTGTAGCCCGGACATCAT 60.408 52.381 0.73 0.00 0.00 2.45
4300 5017 0.035820 GGTTTGTAGCCCGGACATCA 60.036 55.000 0.73 0.00 0.00 3.07
4301 5018 0.252197 AGGTTTGTAGCCCGGACATC 59.748 55.000 0.73 0.00 0.00 3.06
4302 5019 0.696501 AAGGTTTGTAGCCCGGACAT 59.303 50.000 0.73 0.00 0.00 3.06
4303 5020 0.475044 AAAGGTTTGTAGCCCGGACA 59.525 50.000 0.73 0.00 0.00 4.02
4304 5021 0.879090 CAAAGGTTTGTAGCCCGGAC 59.121 55.000 0.73 0.00 33.59 4.79
4305 5022 0.766131 TCAAAGGTTTGTAGCCCGGA 59.234 50.000 0.73 0.00 39.18 5.14
4306 5023 0.879090 GTCAAAGGTTTGTAGCCCGG 59.121 55.000 0.00 0.00 39.18 5.73
4307 5024 0.515564 CGTCAAAGGTTTGTAGCCCG 59.484 55.000 2.49 0.00 39.18 6.13
4308 5025 0.240145 GCGTCAAAGGTTTGTAGCCC 59.760 55.000 11.23 0.00 39.18 5.19
4309 5026 0.948678 TGCGTCAAAGGTTTGTAGCC 59.051 50.000 16.27 0.00 39.18 3.93
4310 5027 1.659211 CGTGCGTCAAAGGTTTGTAGC 60.659 52.381 13.80 13.80 39.79 3.58
4311 5028 1.595794 ACGTGCGTCAAAGGTTTGTAG 59.404 47.619 2.49 0.23 39.18 2.74
4312 5029 1.654317 ACGTGCGTCAAAGGTTTGTA 58.346 45.000 2.49 0.00 39.18 2.41
4313 5030 0.806241 AACGTGCGTCAAAGGTTTGT 59.194 45.000 0.00 0.00 39.18 2.83
4314 5031 1.843753 GAAACGTGCGTCAAAGGTTTG 59.156 47.619 0.00 0.00 36.17 2.93
4315 5032 1.741145 AGAAACGTGCGTCAAAGGTTT 59.259 42.857 0.00 0.00 38.08 3.27
4316 5033 1.375551 AGAAACGTGCGTCAAAGGTT 58.624 45.000 0.00 0.00 0.00 3.50
4317 5034 1.063469 CAAGAAACGTGCGTCAAAGGT 59.937 47.619 0.00 0.00 0.00 3.50
4318 5035 1.741993 CAAGAAACGTGCGTCAAAGG 58.258 50.000 0.00 0.00 0.00 3.11
4319 5036 1.112459 GCAAGAAACGTGCGTCAAAG 58.888 50.000 0.00 0.00 31.20 2.77
4320 5037 0.730265 AGCAAGAAACGTGCGTCAAA 59.270 45.000 0.00 0.00 46.86 2.69
4321 5038 1.525197 CTAGCAAGAAACGTGCGTCAA 59.475 47.619 0.00 0.00 46.86 3.18
4322 5039 1.136690 CTAGCAAGAAACGTGCGTCA 58.863 50.000 0.00 0.00 46.86 4.35
4323 5040 0.438830 CCTAGCAAGAAACGTGCGTC 59.561 55.000 0.00 0.00 46.86 5.19
4324 5041 0.032952 TCCTAGCAAGAAACGTGCGT 59.967 50.000 0.00 0.00 46.86 5.24
4325 5042 1.359848 ATCCTAGCAAGAAACGTGCG 58.640 50.000 0.00 0.00 46.86 5.34
4326 5043 3.492313 CAAATCCTAGCAAGAAACGTGC 58.508 45.455 0.00 0.00 42.55 5.34
4327 5044 3.492313 GCAAATCCTAGCAAGAAACGTG 58.508 45.455 0.00 0.00 0.00 4.49
4328 5045 2.488153 GGCAAATCCTAGCAAGAAACGT 59.512 45.455 0.00 0.00 0.00 3.99
4329 5046 2.487762 TGGCAAATCCTAGCAAGAAACG 59.512 45.455 0.00 0.00 35.26 3.60
4330 5047 4.082026 ACATGGCAAATCCTAGCAAGAAAC 60.082 41.667 0.00 0.00 35.26 2.78
4331 5048 4.088634 ACATGGCAAATCCTAGCAAGAAA 58.911 39.130 0.00 0.00 35.26 2.52
4332 5049 3.700538 ACATGGCAAATCCTAGCAAGAA 58.299 40.909 0.00 0.00 35.26 2.52
4333 5050 3.370840 ACATGGCAAATCCTAGCAAGA 57.629 42.857 0.00 0.00 35.26 3.02
4334 5051 3.444742 TGAACATGGCAAATCCTAGCAAG 59.555 43.478 0.00 0.00 35.26 4.01
4335 5052 3.193267 GTGAACATGGCAAATCCTAGCAA 59.807 43.478 0.00 0.00 35.26 3.91
4336 5053 2.754552 GTGAACATGGCAAATCCTAGCA 59.245 45.455 0.00 0.00 35.26 3.49
4337 5054 2.099756 GGTGAACATGGCAAATCCTAGC 59.900 50.000 0.00 0.00 35.26 3.42
4338 5055 2.689983 GGGTGAACATGGCAAATCCTAG 59.310 50.000 0.00 0.00 35.26 3.02
4339 5056 2.042297 TGGGTGAACATGGCAAATCCTA 59.958 45.455 0.00 0.00 35.26 2.94
4340 5057 1.203162 TGGGTGAACATGGCAAATCCT 60.203 47.619 0.00 0.00 35.26 3.24
4341 5058 1.265236 TGGGTGAACATGGCAAATCC 58.735 50.000 0.00 0.00 0.00 3.01
4342 5059 2.354003 CCTTGGGTGAACATGGCAAATC 60.354 50.000 0.00 0.00 0.00 2.17
4343 5060 1.624813 CCTTGGGTGAACATGGCAAAT 59.375 47.619 0.00 0.00 0.00 2.32
4344 5061 1.047002 CCTTGGGTGAACATGGCAAA 58.953 50.000 0.00 0.00 0.00 3.68
4345 5062 0.187117 TCCTTGGGTGAACATGGCAA 59.813 50.000 0.00 0.00 36.06 4.52
4346 5063 0.187117 TTCCTTGGGTGAACATGGCA 59.813 50.000 0.00 0.00 36.06 4.92
4347 5064 1.337118 TTTCCTTGGGTGAACATGGC 58.663 50.000 0.00 0.00 36.06 4.40
4348 5065 3.865684 GCAATTTCCTTGGGTGAACATGG 60.866 47.826 0.00 0.00 37.10 3.66
4349 5066 3.328505 GCAATTTCCTTGGGTGAACATG 58.671 45.455 0.00 0.00 35.25 3.21
4350 5067 2.302733 GGCAATTTCCTTGGGTGAACAT 59.697 45.455 0.00 0.00 35.25 2.71
4351 5068 1.691434 GGCAATTTCCTTGGGTGAACA 59.309 47.619 0.00 0.00 35.25 3.18
4352 5069 1.691434 TGGCAATTTCCTTGGGTGAAC 59.309 47.619 0.00 0.00 35.25 3.18
4353 5070 2.094100 TGGCAATTTCCTTGGGTGAA 57.906 45.000 0.00 0.00 35.25 3.18
4354 5071 1.901159 CATGGCAATTTCCTTGGGTGA 59.099 47.619 2.57 0.00 35.25 4.02
4355 5072 1.676615 GCATGGCAATTTCCTTGGGTG 60.677 52.381 11.10 0.00 35.25 4.61
4356 5073 0.614812 GCATGGCAATTTCCTTGGGT 59.385 50.000 11.10 0.00 35.25 4.51
4357 5074 0.906775 AGCATGGCAATTTCCTTGGG 59.093 50.000 11.10 0.00 35.25 4.12
4358 5075 1.470285 CGAGCATGGCAATTTCCTTGG 60.470 52.381 11.10 0.00 35.25 3.61
4359 5076 1.917273 CGAGCATGGCAATTTCCTTG 58.083 50.000 5.76 5.76 37.94 3.61
4360 5077 0.174162 GCGAGCATGGCAATTTCCTT 59.826 50.000 0.00 0.00 40.68 3.36
4361 5078 1.811860 GCGAGCATGGCAATTTCCT 59.188 52.632 0.00 0.00 40.68 3.36
4362 5079 1.587088 CGCGAGCATGGCAATTTCC 60.587 57.895 0.00 0.00 41.24 3.13
4363 5080 0.863119 GTCGCGAGCATGGCAATTTC 60.863 55.000 10.24 0.00 41.24 2.17
4364 5081 1.137404 GTCGCGAGCATGGCAATTT 59.863 52.632 10.24 0.00 41.24 1.82
4365 5082 1.585267 TTGTCGCGAGCATGGCAATT 61.585 50.000 10.24 0.00 41.24 2.32
4366 5083 2.039974 TTGTCGCGAGCATGGCAAT 61.040 52.632 10.24 0.00 41.24 3.56
4370 5087 1.006086 TTATGTTGTCGCGAGCATGG 58.994 50.000 22.81 0.00 0.00 3.66
4375 5092 2.159585 TGGCAAATTATGTTGTCGCGAG 60.160 45.455 10.24 0.00 35.83 5.03
4385 5102 5.444877 CGTTCAGCAAACATGGCAAATTATG 60.445 40.000 0.00 0.00 37.77 1.90
4394 5111 4.621034 GGTAATTTCGTTCAGCAAACATGG 59.379 41.667 0.00 0.00 37.77 3.66
4399 5116 4.022416 AGCATGGTAATTTCGTTCAGCAAA 60.022 37.500 0.00 0.00 0.00 3.68
4402 5119 3.685058 GAGCATGGTAATTTCGTTCAGC 58.315 45.455 0.00 0.00 0.00 4.26
4403 5120 3.370978 ACGAGCATGGTAATTTCGTTCAG 59.629 43.478 0.00 0.00 41.19 3.02
4404 5121 3.124466 CACGAGCATGGTAATTTCGTTCA 59.876 43.478 5.92 0.00 41.97 3.18
4405 5122 3.369756 TCACGAGCATGGTAATTTCGTTC 59.630 43.478 5.92 0.00 41.97 3.95
4407 5124 2.671396 GTCACGAGCATGGTAATTTCGT 59.329 45.455 0.00 0.00 44.38 3.85
4408 5125 2.670905 TGTCACGAGCATGGTAATTTCG 59.329 45.455 0.00 0.00 37.31 3.46
4409 5126 4.083537 TGTTGTCACGAGCATGGTAATTTC 60.084 41.667 0.00 0.00 0.00 2.17
4410 5127 3.818210 TGTTGTCACGAGCATGGTAATTT 59.182 39.130 0.00 0.00 0.00 1.82
4412 5129 3.052455 TGTTGTCACGAGCATGGTAAT 57.948 42.857 0.00 0.00 0.00 1.89
4413 5130 2.535012 TGTTGTCACGAGCATGGTAA 57.465 45.000 0.00 0.00 0.00 2.85
4415 5132 2.760634 TATGTTGTCACGAGCATGGT 57.239 45.000 0.00 0.00 0.00 3.55
4416 5133 4.621068 AATTATGTTGTCACGAGCATGG 57.379 40.909 0.00 0.00 0.00 3.66
4417 5134 4.263677 GCAAATTATGTTGTCACGAGCATG 59.736 41.667 0.00 0.00 0.00 4.06
4420 5137 3.171277 GGCAAATTATGTTGTCACGAGC 58.829 45.455 0.00 0.00 33.19 5.03
4421 5138 4.418013 TGGCAAATTATGTTGTCACGAG 57.582 40.909 0.00 0.00 38.17 4.18
4423 5140 4.985413 AGATGGCAAATTATGTTGTCACG 58.015 39.130 0.00 0.00 45.31 4.35
4424 5141 5.953183 TGAGATGGCAAATTATGTTGTCAC 58.047 37.500 0.00 0.00 45.31 3.67
4425 5142 6.587206 TTGAGATGGCAAATTATGTTGTCA 57.413 33.333 0.00 0.00 46.45 3.58
4426 5143 6.867816 TGTTTGAGATGGCAAATTATGTTGTC 59.132 34.615 0.00 0.00 39.65 3.18
4428 5145 7.837202 ATGTTTGAGATGGCAAATTATGTTG 57.163 32.000 0.00 0.00 39.65 3.33
4429 5146 9.590451 CTTATGTTTGAGATGGCAAATTATGTT 57.410 29.630 0.00 0.00 39.65 2.71
4430 5147 8.970020 TCTTATGTTTGAGATGGCAAATTATGT 58.030 29.630 0.00 0.00 39.65 2.29
4431 5148 9.976511 ATCTTATGTTTGAGATGGCAAATTATG 57.023 29.630 0.00 0.00 39.65 1.90
4434 5151 9.729281 AAAATCTTATGTTTGAGATGGCAAATT 57.271 25.926 0.00 0.00 39.65 1.82
4435 5152 9.374838 GAAAATCTTATGTTTGAGATGGCAAAT 57.625 29.630 0.00 0.00 39.65 2.32
4436 5153 7.818930 GGAAAATCTTATGTTTGAGATGGCAAA 59.181 33.333 0.00 0.00 35.54 3.68
4437 5154 7.322664 GGAAAATCTTATGTTTGAGATGGCAA 58.677 34.615 0.00 0.00 33.12 4.52
4438 5155 6.127366 GGGAAAATCTTATGTTTGAGATGGCA 60.127 38.462 0.00 0.00 33.12 4.92
4439 5156 6.097412 AGGGAAAATCTTATGTTTGAGATGGC 59.903 38.462 0.00 0.00 33.12 4.40
4440 5157 7.486647 CAGGGAAAATCTTATGTTTGAGATGG 58.513 38.462 0.00 0.00 33.12 3.51
4441 5158 6.976925 GCAGGGAAAATCTTATGTTTGAGATG 59.023 38.462 0.00 0.00 33.12 2.90
4442 5159 6.894103 AGCAGGGAAAATCTTATGTTTGAGAT 59.106 34.615 0.00 0.00 34.19 2.75
4443 5160 6.151648 CAGCAGGGAAAATCTTATGTTTGAGA 59.848 38.462 0.00 0.00 0.00 3.27
4444 5161 6.151648 TCAGCAGGGAAAATCTTATGTTTGAG 59.848 38.462 0.00 0.00 0.00 3.02
4445 5162 6.009589 TCAGCAGGGAAAATCTTATGTTTGA 58.990 36.000 0.00 0.00 0.00 2.69
4446 5163 6.271488 TCAGCAGGGAAAATCTTATGTTTG 57.729 37.500 0.00 0.00 0.00 2.93
4447 5164 6.916360 TTCAGCAGGGAAAATCTTATGTTT 57.084 33.333 0.00 0.00 0.00 2.83
4448 5165 6.916360 TTTCAGCAGGGAAAATCTTATGTT 57.084 33.333 0.00 0.00 34.05 2.71
4449 5166 6.573094 GCTTTTCAGCAGGGAAAATCTTATGT 60.573 38.462 10.18 0.00 46.49 2.29
4450 5167 5.809051 GCTTTTCAGCAGGGAAAATCTTATG 59.191 40.000 10.18 1.98 46.49 1.90
4451 5168 5.970592 GCTTTTCAGCAGGGAAAATCTTAT 58.029 37.500 10.18 0.00 46.49 1.73
4452 5169 5.391312 GCTTTTCAGCAGGGAAAATCTTA 57.609 39.130 10.18 0.00 46.49 2.10
4453 5170 4.263018 GCTTTTCAGCAGGGAAAATCTT 57.737 40.909 10.18 0.00 46.49 2.40
4454 5171 3.949842 GCTTTTCAGCAGGGAAAATCT 57.050 42.857 10.18 0.00 46.49 2.40
4488 5205 3.540314 AAAAATGTCCTTGCACAGCAA 57.460 38.095 4.22 4.22 46.80 3.91
4491 5208 5.771469 TGATGTAAAAATGTCCTTGCACAG 58.229 37.500 0.00 0.00 0.00 3.66
4508 5225 2.410392 CGCGCTGTACAACTTTGATGTA 59.590 45.455 5.56 0.00 32.27 2.29
4509 5226 1.194547 CGCGCTGTACAACTTTGATGT 59.805 47.619 5.56 0.00 34.81 3.06
4510 5227 1.869503 CGCGCTGTACAACTTTGATG 58.130 50.000 5.56 0.00 0.00 3.07
4511 5228 0.165944 GCGCGCTGTACAACTTTGAT 59.834 50.000 26.67 0.00 0.00 2.57
4512 5229 1.567537 GCGCGCTGTACAACTTTGA 59.432 52.632 26.67 0.00 0.00 2.69
4513 5230 1.440353 GGCGCGCTGTACAACTTTG 60.440 57.895 32.29 0.00 0.00 2.77
4514 5231 2.613506 GGGCGCGCTGTACAACTTT 61.614 57.895 32.29 0.00 0.00 2.66
4520 5237 2.278989 TATTCGGGCGCGCTGTAC 60.279 61.111 32.29 14.29 0.00 2.90
4532 5249 0.861837 GGTGGATTCGCTGCTATTCG 59.138 55.000 0.00 0.00 0.00 3.34
4543 5260 2.300996 TGAGCCCTCAGGTGGATTC 58.699 57.895 0.00 0.00 34.14 2.52
4553 5270 0.752054 CAGTGAGATCCTGAGCCCTC 59.248 60.000 0.00 0.00 31.38 4.30
4554 5271 0.042431 ACAGTGAGATCCTGAGCCCT 59.958 55.000 0.00 0.00 34.04 5.19
4555 5272 0.908198 AACAGTGAGATCCTGAGCCC 59.092 55.000 0.00 0.00 34.04 5.19
4556 5273 3.895232 TTAACAGTGAGATCCTGAGCC 57.105 47.619 0.00 0.00 34.04 4.70
4557 5274 3.935828 GGTTTAACAGTGAGATCCTGAGC 59.064 47.826 0.00 0.00 34.04 4.26
4558 5275 5.152623 TGGTTTAACAGTGAGATCCTGAG 57.847 43.478 0.00 0.00 34.04 3.35
4559 5276 5.305585 GTTGGTTTAACAGTGAGATCCTGA 58.694 41.667 0.00 0.00 39.16 3.86
4560 5277 4.455877 GGTTGGTTTAACAGTGAGATCCTG 59.544 45.833 0.00 0.00 41.18 3.86
4561 5278 4.506802 GGGTTGGTTTAACAGTGAGATCCT 60.507 45.833 0.00 0.00 41.18 3.24
4562 5279 3.756963 GGGTTGGTTTAACAGTGAGATCC 59.243 47.826 0.00 0.00 41.18 3.36
4569 5286 2.028876 GTGCTGGGTTGGTTTAACAGT 58.971 47.619 0.00 0.00 41.18 3.55
4585 5302 2.121992 CTCCCTCAACTGCTGGTGCT 62.122 60.000 3.32 0.00 40.48 4.40
4586 5303 1.673665 CTCCCTCAACTGCTGGTGC 60.674 63.158 3.32 0.00 40.20 5.01
4587 5304 0.397941 TTCTCCCTCAACTGCTGGTG 59.602 55.000 1.51 1.51 0.00 4.17
4588 5305 1.072965 CTTTCTCCCTCAACTGCTGGT 59.927 52.381 0.00 0.00 0.00 4.00
4589 5306 1.612726 CCTTTCTCCCTCAACTGCTGG 60.613 57.143 0.00 0.00 0.00 4.85
4598 5315 3.081804 TCGAAAAATGCCTTTCTCCCTC 58.918 45.455 0.00 0.00 33.86 4.30
4604 5321 6.036470 CCCTCTTTATCGAAAAATGCCTTTC 58.964 40.000 0.00 0.00 32.88 2.62
4607 5324 4.855340 TCCCTCTTTATCGAAAAATGCCT 58.145 39.130 0.00 0.00 0.00 4.75
4608 5325 4.881850 TCTCCCTCTTTATCGAAAAATGCC 59.118 41.667 0.00 0.00 0.00 4.40
4609 5326 6.436843 TTCTCCCTCTTTATCGAAAAATGC 57.563 37.500 0.00 0.00 0.00 3.56
4610 5327 8.178313 GTCTTTCTCCCTCTTTATCGAAAAATG 58.822 37.037 0.00 0.00 0.00 2.32
4611 5328 7.883311 TGTCTTTCTCCCTCTTTATCGAAAAAT 59.117 33.333 0.00 0.00 0.00 1.82
4612 5329 7.221450 TGTCTTTCTCCCTCTTTATCGAAAAA 58.779 34.615 0.00 0.00 0.00 1.94
4613 5330 6.765403 TGTCTTTCTCCCTCTTTATCGAAAA 58.235 36.000 0.00 0.00 0.00 2.29
4614 5331 6.354794 TGTCTTTCTCCCTCTTTATCGAAA 57.645 37.500 0.00 0.00 0.00 3.46
4615 5332 5.995565 TGTCTTTCTCCCTCTTTATCGAA 57.004 39.130 0.00 0.00 0.00 3.71
4616 5333 5.656859 TCATGTCTTTCTCCCTCTTTATCGA 59.343 40.000 0.00 0.00 0.00 3.59
4617 5334 5.751028 GTCATGTCTTTCTCCCTCTTTATCG 59.249 44.000 0.00 0.00 0.00 2.92
4618 5335 6.052360 GGTCATGTCTTTCTCCCTCTTTATC 58.948 44.000 0.00 0.00 0.00 1.75
4619 5336 5.488919 TGGTCATGTCTTTCTCCCTCTTTAT 59.511 40.000 0.00 0.00 0.00 1.40
4620 5337 4.844085 TGGTCATGTCTTTCTCCCTCTTTA 59.156 41.667 0.00 0.00 0.00 1.85
4621 5338 3.652869 TGGTCATGTCTTTCTCCCTCTTT 59.347 43.478 0.00 0.00 0.00 2.52
4622 5339 3.251484 TGGTCATGTCTTTCTCCCTCTT 58.749 45.455 0.00 0.00 0.00 2.85
4623 5340 2.907892 TGGTCATGTCTTTCTCCCTCT 58.092 47.619 0.00 0.00 0.00 3.69
4624 5341 3.604582 CTTGGTCATGTCTTTCTCCCTC 58.395 50.000 0.00 0.00 0.00 4.30
4625 5342 2.290577 GCTTGGTCATGTCTTTCTCCCT 60.291 50.000 0.00 0.00 0.00 4.20
4626 5343 2.087646 GCTTGGTCATGTCTTTCTCCC 58.912 52.381 0.00 0.00 0.00 4.30
4627 5344 2.087646 GGCTTGGTCATGTCTTTCTCC 58.912 52.381 0.00 0.00 0.00 3.71
4628 5345 2.783135 TGGCTTGGTCATGTCTTTCTC 58.217 47.619 0.00 0.00 0.00 2.87
4629 5346 2.957402 TGGCTTGGTCATGTCTTTCT 57.043 45.000 0.00 0.00 0.00 2.52
4630 5347 3.507233 TCATTGGCTTGGTCATGTCTTTC 59.493 43.478 0.00 0.00 0.00 2.62
4634 5351 3.940209 TTTCATTGGCTTGGTCATGTC 57.060 42.857 0.00 0.00 0.00 3.06
4697 5414 2.113139 GAGTGGGGTGTGTGGGTG 59.887 66.667 0.00 0.00 0.00 4.61
4698 5415 2.367648 TGAGTGGGGTGTGTGGGT 60.368 61.111 0.00 0.00 0.00 4.51
4699 5416 2.113139 GTGAGTGGGGTGTGTGGG 59.887 66.667 0.00 0.00 0.00 4.61
4700 5417 0.178992 ATTGTGAGTGGGGTGTGTGG 60.179 55.000 0.00 0.00 0.00 4.17
4708 5425 1.293924 GCGATCAGATTGTGAGTGGG 58.706 55.000 0.00 0.00 39.07 4.61
4824 5542 1.848652 GGTAGGACAGTGCTGTAGGA 58.151 55.000 4.51 0.00 45.05 2.94
4845 5567 0.399233 CTGGGGTTTGGGTTTGGGAA 60.399 55.000 0.00 0.00 0.00 3.97
4846 5568 1.234529 CTGGGGTTTGGGTTTGGGA 59.765 57.895 0.00 0.00 0.00 4.37
4858 5580 2.069165 GACTGGTTGGCTTCTGGGGT 62.069 60.000 0.00 0.00 0.00 4.95
4869 5591 1.299976 GGGCAGGGTAGACTGGTTG 59.700 63.158 0.00 0.00 38.90 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.