Multiple sequence alignment - TraesCS7A01G152600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G152600 chr7A 100.000 3020 0 0 619 3638 105862706 105865725 0.000000e+00 5578
1 TraesCS7A01G152600 chr7A 100.000 132 0 0 1 132 105862088 105862219 1.010000e-60 244
2 TraesCS7A01G152600 chr7A 76.712 438 87 11 1225 1653 148657044 148657475 2.830000e-56 230
3 TraesCS7A01G152600 chr7A 79.920 249 36 10 1232 1480 237507745 237507979 1.740000e-38 171
4 TraesCS7A01G152600 chr7D 90.871 2607 111 55 721 3284 101806206 101808728 0.000000e+00 3378
5 TraesCS7A01G152600 chr7D 76.417 441 83 14 1225 1653 147411550 147411981 6.120000e-53 219
6 TraesCS7A01G152600 chr7B 91.126 2051 100 32 715 2721 59311005 59313017 0.000000e+00 2704
7 TraesCS7A01G152600 chr7B 84.717 530 45 16 2772 3294 59313029 59313529 7.020000e-137 497
8 TraesCS7A01G152600 chr7B 81.685 273 43 3 1386 1653 110308814 110309084 1.700000e-53 220
9 TraesCS7A01G152600 chr6D 80.159 504 79 15 1221 1718 436716922 436716434 1.240000e-94 357
10 TraesCS7A01G152600 chr6A 79.528 508 75 24 1221 1718 584912080 584911592 5.820000e-88 335
11 TraesCS7A01G152600 chr6B 79.596 495 66 24 1221 1696 659936584 659936106 4.530000e-84 322


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G152600 chr7A 105862088 105865725 3637 False 2911.0 5578 100.0000 1 3638 2 chr7A.!!$F3 3637
1 TraesCS7A01G152600 chr7D 101806206 101808728 2522 False 3378.0 3378 90.8710 721 3284 1 chr7D.!!$F1 2563
2 TraesCS7A01G152600 chr7B 59311005 59313529 2524 False 1600.5 2704 87.9215 715 3294 2 chr7B.!!$F2 2579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.251608 GCTTAGGGGGCAGAAAACCA 60.252 55.0 0.00 0.0 0.00 3.67 F
1113 1121 0.249784 CATGTCCAGCATCTCGGGAG 60.250 60.0 0.00 0.0 39.76 4.30 F
2602 2634 0.519519 TACAGGAATTGCGGCGTTTG 59.480 50.0 9.37 0.0 0.00 2.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1896 1928 1.222936 CATGGACAGGCACCTCCTC 59.777 63.158 0.00 0.0 45.52 3.71 R
2608 2649 0.041839 GCTATCTGTGCGCCAATTCG 60.042 55.000 4.18 0.0 0.00 3.34 R
3535 3610 0.040058 TACTGACTGGCGGGTCCTAA 59.960 55.000 0.00 0.0 35.54 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.771577 CTAGCTTCGGGGGAACATAAT 57.228 47.619 0.00 0.00 0.00 1.28
21 22 4.884668 CTAGCTTCGGGGGAACATAATA 57.115 45.455 0.00 0.00 0.00 0.98
22 23 3.771577 AGCTTCGGGGGAACATAATAG 57.228 47.619 0.00 0.00 0.00 1.73
23 24 3.046374 AGCTTCGGGGGAACATAATAGT 58.954 45.455 0.00 0.00 0.00 2.12
24 25 3.458487 AGCTTCGGGGGAACATAATAGTT 59.542 43.478 0.00 0.00 0.00 2.24
25 26 3.564225 GCTTCGGGGGAACATAATAGTTG 59.436 47.826 0.00 0.00 0.00 3.16
26 27 4.777463 CTTCGGGGGAACATAATAGTTGT 58.223 43.478 0.00 0.00 0.00 3.32
27 28 4.847990 TCGGGGGAACATAATAGTTGTT 57.152 40.909 0.00 0.00 39.91 2.83
39 40 9.561069 AACATAATAGTTGTTCCATAGCTTAGG 57.439 33.333 0.00 0.00 31.87 2.69
40 41 8.157476 ACATAATAGTTGTTCCATAGCTTAGGG 58.843 37.037 0.00 0.00 0.00 3.53
41 42 3.283259 AGTTGTTCCATAGCTTAGGGC 57.717 47.619 0.00 0.00 42.19 5.19
50 51 2.516405 GCTTAGGGCTTAGGGGGC 59.484 66.667 0.00 0.00 38.06 5.80
51 52 2.383601 GCTTAGGGCTTAGGGGGCA 61.384 63.158 0.00 0.00 38.06 5.36
52 53 1.839894 CTTAGGGCTTAGGGGGCAG 59.160 63.158 0.00 0.00 0.00 4.85
53 54 0.694444 CTTAGGGCTTAGGGGGCAGA 60.694 60.000 0.00 0.00 0.00 4.26
54 55 0.253441 TTAGGGCTTAGGGGGCAGAA 60.253 55.000 0.00 0.00 0.00 3.02
55 56 0.253441 TAGGGCTTAGGGGGCAGAAA 60.253 55.000 0.00 0.00 0.00 2.52
56 57 1.146544 AGGGCTTAGGGGGCAGAAAA 61.147 55.000 0.00 0.00 0.00 2.29
57 58 0.970937 GGGCTTAGGGGGCAGAAAAC 60.971 60.000 0.00 0.00 0.00 2.43
58 59 0.970937 GGCTTAGGGGGCAGAAAACC 60.971 60.000 0.00 0.00 0.00 3.27
59 60 0.251608 GCTTAGGGGGCAGAAAACCA 60.252 55.000 0.00 0.00 0.00 3.67
60 61 1.545841 CTTAGGGGGCAGAAAACCAC 58.454 55.000 0.00 0.00 0.00 4.16
61 62 1.075536 CTTAGGGGGCAGAAAACCACT 59.924 52.381 0.00 0.00 44.32 4.00
62 63 1.154430 TAGGGGGCAGAAAACCACTT 58.846 50.000 0.00 0.00 37.12 3.16
63 64 0.264657 AGGGGGCAGAAAACCACTTT 59.735 50.000 0.00 0.00 37.12 2.66
64 65 1.128200 GGGGGCAGAAAACCACTTTT 58.872 50.000 0.00 0.00 31.91 2.27
65 66 1.070134 GGGGGCAGAAAACCACTTTTC 59.930 52.381 0.00 0.00 43.97 2.29
74 75 5.986004 GAAAACCACTTTTCTCTCTCGAA 57.014 39.130 0.00 0.00 41.46 3.71
75 76 6.359480 GAAAACCACTTTTCTCTCTCGAAA 57.641 37.500 0.00 0.00 41.46 3.46
76 77 6.753107 AAAACCACTTTTCTCTCTCGAAAA 57.247 33.333 0.00 0.00 39.74 2.29
77 78 5.736486 AACCACTTTTCTCTCTCGAAAAC 57.264 39.130 0.00 0.00 37.81 2.43
78 79 4.766375 ACCACTTTTCTCTCTCGAAAACA 58.234 39.130 0.00 0.00 37.81 2.83
79 80 4.571176 ACCACTTTTCTCTCTCGAAAACAC 59.429 41.667 0.00 0.00 37.81 3.32
80 81 4.570772 CCACTTTTCTCTCTCGAAAACACA 59.429 41.667 0.00 0.00 37.81 3.72
81 82 5.064707 CCACTTTTCTCTCTCGAAAACACAA 59.935 40.000 0.00 0.00 37.81 3.33
82 83 6.403200 CCACTTTTCTCTCTCGAAAACACAAA 60.403 38.462 0.00 0.00 37.81 2.83
83 84 6.684555 CACTTTTCTCTCTCGAAAACACAAAG 59.315 38.462 0.00 0.00 37.81 2.77
84 85 6.371825 ACTTTTCTCTCTCGAAAACACAAAGT 59.628 34.615 4.43 4.43 37.81 2.66
85 86 6.737254 TTTCTCTCTCGAAAACACAAAGTT 57.263 33.333 0.00 0.00 43.89 2.66
98 99 5.464168 AACACAAAGTTTGCATCTAGATGC 58.536 37.500 39.23 39.23 46.91 3.91
651 652 3.030475 CGAGCAAACATCGTCTGAATG 57.970 47.619 0.00 0.00 35.48 2.67
652 653 2.413112 CGAGCAAACATCGTCTGAATGT 59.587 45.455 0.00 0.00 35.48 2.71
653 654 3.120546 CGAGCAAACATCGTCTGAATGTT 60.121 43.478 2.62 2.62 39.88 2.71
654 655 4.398247 GAGCAAACATCGTCTGAATGTTC 58.602 43.478 7.87 0.00 37.52 3.18
655 656 3.814842 AGCAAACATCGTCTGAATGTTCA 59.185 39.130 7.87 0.00 37.52 3.18
656 657 4.275689 AGCAAACATCGTCTGAATGTTCAA 59.724 37.500 7.87 0.00 37.52 2.69
657 658 4.379793 GCAAACATCGTCTGAATGTTCAAC 59.620 41.667 7.87 0.00 37.52 3.18
658 659 5.509771 CAAACATCGTCTGAATGTTCAACA 58.490 37.500 7.87 0.00 37.52 3.33
659 660 5.749596 AACATCGTCTGAATGTTCAACAA 57.250 34.783 0.00 0.00 36.64 2.83
660 661 5.749596 ACATCGTCTGAATGTTCAACAAA 57.250 34.783 0.00 0.00 36.64 2.83
661 662 5.510671 ACATCGTCTGAATGTTCAACAAAC 58.489 37.500 0.00 0.00 36.64 2.93
662 663 4.545823 TCGTCTGAATGTTCAACAAACC 57.454 40.909 0.00 0.00 37.03 3.27
663 664 3.001838 TCGTCTGAATGTTCAACAAACCG 59.998 43.478 0.00 0.00 37.03 4.44
664 665 3.242608 CGTCTGAATGTTCAACAAACCGT 60.243 43.478 0.00 0.00 37.03 4.83
665 666 4.025563 CGTCTGAATGTTCAACAAACCGTA 60.026 41.667 0.00 0.00 37.03 4.02
666 667 5.333798 CGTCTGAATGTTCAACAAACCGTAT 60.334 40.000 0.00 0.00 37.03 3.06
667 668 6.435428 GTCTGAATGTTCAACAAACCGTATT 58.565 36.000 0.00 0.00 37.03 1.89
668 669 6.359617 GTCTGAATGTTCAACAAACCGTATTG 59.640 38.462 0.00 0.00 37.03 1.90
669 670 4.979197 TGAATGTTCAACAAACCGTATTGC 59.021 37.500 0.00 0.00 37.03 3.56
670 671 2.988343 TGTTCAACAAACCGTATTGCG 58.012 42.857 0.00 0.00 37.03 4.85
671 672 2.355132 TGTTCAACAAACCGTATTGCGT 59.645 40.909 0.00 0.00 37.03 5.24
672 673 2.672188 TCAACAAACCGTATTGCGTG 57.328 45.000 0.00 0.00 39.32 5.34
673 674 2.210961 TCAACAAACCGTATTGCGTGA 58.789 42.857 0.00 0.44 39.32 4.35
674 675 2.222213 TCAACAAACCGTATTGCGTGAG 59.778 45.455 0.00 0.00 39.32 3.51
675 676 1.153353 ACAAACCGTATTGCGTGAGG 58.847 50.000 0.00 0.00 39.32 3.86
676 677 1.153353 CAAACCGTATTGCGTGAGGT 58.847 50.000 0.00 0.00 39.32 3.85
677 678 1.533731 CAAACCGTATTGCGTGAGGTT 59.466 47.619 0.00 0.00 45.99 3.50
678 679 1.435577 AACCGTATTGCGTGAGGTTC 58.564 50.000 0.00 0.00 40.81 3.62
679 680 0.606604 ACCGTATTGCGTGAGGTTCT 59.393 50.000 0.00 0.00 39.32 3.01
680 681 0.999406 CCGTATTGCGTGAGGTTCTG 59.001 55.000 0.00 0.00 39.32 3.02
681 682 1.403647 CCGTATTGCGTGAGGTTCTGA 60.404 52.381 0.00 0.00 39.32 3.27
682 683 1.654105 CGTATTGCGTGAGGTTCTGAC 59.346 52.381 0.00 0.00 35.54 3.51
683 684 1.654105 GTATTGCGTGAGGTTCTGACG 59.346 52.381 2.76 2.76 43.36 4.35
684 685 0.317160 ATTGCGTGAGGTTCTGACGA 59.683 50.000 10.74 0.00 43.19 4.20
685 686 0.317160 TTGCGTGAGGTTCTGACGAT 59.683 50.000 10.74 0.00 43.19 3.73
686 687 1.170442 TGCGTGAGGTTCTGACGATA 58.830 50.000 10.74 0.00 43.19 2.92
687 688 1.135489 TGCGTGAGGTTCTGACGATAC 60.135 52.381 10.74 0.00 43.19 2.24
688 689 1.811428 CGTGAGGTTCTGACGATACG 58.189 55.000 0.89 0.00 43.19 3.06
689 690 1.129998 CGTGAGGTTCTGACGATACGT 59.870 52.381 0.89 0.00 43.19 3.57
690 691 2.516923 GTGAGGTTCTGACGATACGTG 58.483 52.381 0.00 0.00 41.37 4.49
691 692 2.161012 GTGAGGTTCTGACGATACGTGA 59.839 50.000 0.00 0.00 41.37 4.35
692 693 3.014623 TGAGGTTCTGACGATACGTGAT 58.985 45.455 0.00 0.00 41.37 3.06
693 694 3.181500 TGAGGTTCTGACGATACGTGATG 60.181 47.826 0.00 0.00 41.37 3.07
694 695 3.014623 AGGTTCTGACGATACGTGATGA 58.985 45.455 0.00 0.00 41.37 2.92
695 696 3.442625 AGGTTCTGACGATACGTGATGAA 59.557 43.478 0.00 1.21 41.37 2.57
696 697 4.082408 AGGTTCTGACGATACGTGATGAAA 60.082 41.667 0.00 0.00 41.37 2.69
697 698 4.031426 GGTTCTGACGATACGTGATGAAAC 59.969 45.833 0.00 2.88 41.37 2.78
698 699 3.766151 TCTGACGATACGTGATGAAACC 58.234 45.455 0.00 0.00 41.37 3.27
699 700 3.442625 TCTGACGATACGTGATGAAACCT 59.557 43.478 0.00 0.00 41.37 3.50
700 701 4.082408 TCTGACGATACGTGATGAAACCTT 60.082 41.667 0.00 0.00 41.37 3.50
701 702 5.124297 TCTGACGATACGTGATGAAACCTTA 59.876 40.000 0.00 0.00 41.37 2.69
702 703 5.097529 TGACGATACGTGATGAAACCTTAC 58.902 41.667 0.00 0.00 41.37 2.34
703 704 5.106038 TGACGATACGTGATGAAACCTTACT 60.106 40.000 0.00 0.00 41.37 2.24
704 705 5.100259 ACGATACGTGATGAAACCTTACTG 58.900 41.667 0.00 0.00 39.18 2.74
705 706 4.026804 CGATACGTGATGAAACCTTACTGC 60.027 45.833 0.00 0.00 0.00 4.40
706 707 3.402628 ACGTGATGAAACCTTACTGCT 57.597 42.857 0.00 0.00 0.00 4.24
707 708 3.067106 ACGTGATGAAACCTTACTGCTG 58.933 45.455 0.00 0.00 0.00 4.41
708 709 3.244078 ACGTGATGAAACCTTACTGCTGA 60.244 43.478 0.00 0.00 0.00 4.26
709 710 3.745975 CGTGATGAAACCTTACTGCTGAA 59.254 43.478 0.00 0.00 0.00 3.02
710 711 4.393062 CGTGATGAAACCTTACTGCTGAAT 59.607 41.667 0.00 0.00 0.00 2.57
711 712 5.106555 CGTGATGAAACCTTACTGCTGAATT 60.107 40.000 0.00 0.00 0.00 2.17
712 713 6.088824 GTGATGAAACCTTACTGCTGAATTG 58.911 40.000 0.00 0.00 0.00 2.32
713 714 6.003326 TGATGAAACCTTACTGCTGAATTGA 58.997 36.000 0.00 0.00 0.00 2.57
714 715 5.689383 TGAAACCTTACTGCTGAATTGAC 57.311 39.130 0.00 0.00 0.00 3.18
715 716 5.376625 TGAAACCTTACTGCTGAATTGACT 58.623 37.500 0.00 0.00 0.00 3.41
716 717 5.239306 TGAAACCTTACTGCTGAATTGACTG 59.761 40.000 0.00 0.00 0.00 3.51
717 718 3.679389 ACCTTACTGCTGAATTGACTGG 58.321 45.455 0.00 0.00 0.00 4.00
750 751 0.526211 GGTCAAATCCGGGCAAACTC 59.474 55.000 0.00 0.00 0.00 3.01
850 852 1.509923 GATGCAGCTTTGGTCAGCC 59.490 57.895 0.00 0.00 41.12 4.85
918 920 3.181489 CCTCTGCAAATTCAGAATGGCTC 60.181 47.826 16.81 1.51 41.99 4.70
919 921 2.421073 TCTGCAAATTCAGAATGGCTCG 59.579 45.455 16.81 10.45 39.89 5.03
922 929 2.223433 GCAAATTCAGAATGGCTCGGAG 60.223 50.000 11.19 0.00 36.16 4.63
924 931 3.853355 AATTCAGAATGGCTCGGAGAT 57.147 42.857 9.69 0.00 36.16 2.75
928 935 4.060038 TCAGAATGGCTCGGAGATAAAC 57.940 45.455 9.69 0.00 36.16 2.01
938 945 2.726832 GGAGATAAACGGATCCGAGG 57.273 55.000 39.55 12.61 42.83 4.63
995 1002 0.609681 ATACCGATCGCCTCTCCCTC 60.610 60.000 10.32 0.00 0.00 4.30
1018 1025 0.725117 CACATTTACCTTCCGTCGCC 59.275 55.000 0.00 0.00 0.00 5.54
1112 1120 1.689243 CCATGTCCAGCATCTCGGGA 61.689 60.000 0.00 0.00 36.68 5.14
1113 1121 0.249784 CATGTCCAGCATCTCGGGAG 60.250 60.000 0.00 0.00 39.76 4.30
1117 1125 2.584418 CAGCATCTCGGGAGCACG 60.584 66.667 9.01 0.00 0.00 5.34
1317 1334 0.607217 TGCTGGTGCAGAACATCCTG 60.607 55.000 0.00 0.00 45.31 3.86
1635 1664 2.969016 CTGCTCTCGCACTCCACT 59.031 61.111 0.00 0.00 42.25 4.00
1776 1805 0.749454 ACGGCAATGAGAATGAGGCC 60.749 55.000 0.00 0.00 38.04 5.19
1778 1807 1.202687 CGGCAATGAGAATGAGGCCTA 60.203 52.381 4.42 0.00 39.23 3.93
1808 1837 1.370587 GAGGAGGTCGTCGAGGTGAG 61.371 65.000 4.85 0.00 0.00 3.51
1812 1841 2.637383 GGTCGTCGAGGTGAGGCTT 61.637 63.158 4.85 0.00 32.48 4.35
1870 1902 2.028190 ATCTCGCCGCCGATCAAG 59.972 61.111 0.00 0.00 43.47 3.02
1876 1908 4.585526 CCGCCGATCAAGCCGCTA 62.586 66.667 0.00 0.00 0.00 4.26
1896 1928 1.213013 CAGAGACGACCTTGGACGG 59.787 63.158 14.87 0.00 0.00 4.79
2052 2084 3.379445 GACGTCGCCAAGGGAGGA 61.379 66.667 0.00 0.00 35.08 3.71
2307 2339 2.502080 GACGTGGAGTCGCAGTCG 60.502 66.667 0.00 0.00 40.43 4.18
2469 2501 7.095355 GCATTTGATTTTTGCACATCTTCTTCT 60.095 33.333 0.00 0.00 36.40 2.85
2470 2502 8.770828 CATTTGATTTTTGCACATCTTCTTCTT 58.229 29.630 0.00 0.00 0.00 2.52
2471 2503 7.935338 TTGATTTTTGCACATCTTCTTCTTC 57.065 32.000 0.00 0.00 0.00 2.87
2472 2504 7.281040 TGATTTTTGCACATCTTCTTCTTCT 57.719 32.000 0.00 0.00 0.00 2.85
2473 2505 7.719483 TGATTTTTGCACATCTTCTTCTTCTT 58.281 30.769 0.00 0.00 0.00 2.52
2474 2506 7.864379 TGATTTTTGCACATCTTCTTCTTCTTC 59.136 33.333 0.00 0.00 0.00 2.87
2475 2507 6.949352 TTTTGCACATCTTCTTCTTCTTCT 57.051 33.333 0.00 0.00 0.00 2.85
2476 2508 6.949352 TTTGCACATCTTCTTCTTCTTCTT 57.051 33.333 0.00 0.00 0.00 2.52
2477 2509 6.551385 TTGCACATCTTCTTCTTCTTCTTC 57.449 37.500 0.00 0.00 0.00 2.87
2478 2510 5.862845 TGCACATCTTCTTCTTCTTCTTCT 58.137 37.500 0.00 0.00 0.00 2.85
2492 2524 9.618890 TTCTTCTTCTTCTTCTTGAAATTCAGA 57.381 29.630 0.00 0.00 33.79 3.27
2498 2530 7.365741 TCTTCTTCTTGAAATTCAGATTGCAC 58.634 34.615 0.00 0.00 30.30 4.57
2502 2534 8.199449 TCTTCTTGAAATTCAGATTGCACTTTT 58.801 29.630 0.00 0.00 30.30 2.27
2503 2535 7.703298 TCTTGAAATTCAGATTGCACTTTTG 57.297 32.000 0.00 0.00 30.30 2.44
2504 2536 7.490840 TCTTGAAATTCAGATTGCACTTTTGA 58.509 30.769 0.00 0.00 30.30 2.69
2505 2537 7.980662 TCTTGAAATTCAGATTGCACTTTTGAA 59.019 29.630 0.00 7.18 30.30 2.69
2506 2538 7.703298 TGAAATTCAGATTGCACTTTTGAAG 57.297 32.000 9.60 0.00 32.00 3.02
2507 2539 7.267128 TGAAATTCAGATTGCACTTTTGAAGT 58.733 30.769 9.60 5.65 44.06 3.01
2508 2540 7.765360 TGAAATTCAGATTGCACTTTTGAAGTT 59.235 29.630 13.62 13.62 40.46 2.66
2509 2541 8.496707 AAATTCAGATTGCACTTTTGAAGTTT 57.503 26.923 10.14 8.22 40.46 2.66
2514 2546 6.310956 CAGATTGCACTTTTGAAGTTTGAACA 59.689 34.615 0.00 0.00 40.46 3.18
2518 2550 4.327087 GCACTTTTGAAGTTTGAACACAGG 59.673 41.667 0.00 0.00 40.46 4.00
2523 2555 6.377327 TTTGAAGTTTGAACACAGGAGATC 57.623 37.500 0.00 0.00 0.00 2.75
2524 2556 5.034852 TGAAGTTTGAACACAGGAGATCA 57.965 39.130 0.00 0.00 0.00 2.92
2525 2557 5.059161 TGAAGTTTGAACACAGGAGATCAG 58.941 41.667 0.00 0.00 0.00 2.90
2528 2560 5.059833 AGTTTGAACACAGGAGATCAGTTC 58.940 41.667 0.00 0.00 39.11 3.01
2536 2568 4.752101 CACAGGAGATCAGTTCGTTTTTCT 59.248 41.667 0.00 0.00 0.00 2.52
2538 2570 5.467063 ACAGGAGATCAGTTCGTTTTTCTTC 59.533 40.000 0.00 0.00 0.00 2.87
2540 2572 4.387083 GAGATCAGTTCGTTTTTCTTCGC 58.613 43.478 0.00 0.00 0.00 4.70
2542 2574 1.928503 TCAGTTCGTTTTTCTTCGCGT 59.071 42.857 5.77 0.00 0.00 6.01
2543 2575 2.034339 TCAGTTCGTTTTTCTTCGCGTC 60.034 45.455 5.77 0.00 0.00 5.19
2544 2576 1.071698 AGTTCGTTTTTCTTCGCGTCG 60.072 47.619 5.77 0.00 0.00 5.12
2550 2582 2.916735 TTTTCTTCGCGTCGTTCTTC 57.083 45.000 5.77 0.00 0.00 2.87
2551 2583 1.842720 TTTCTTCGCGTCGTTCTTCA 58.157 45.000 5.77 0.00 0.00 3.02
2552 2584 1.405461 TTCTTCGCGTCGTTCTTCAG 58.595 50.000 5.77 0.00 0.00 3.02
2561 2593 3.000925 GCGTCGTTCTTCAGTTCTTTTGA 59.999 43.478 0.00 0.00 0.00 2.69
2562 2594 4.493545 GCGTCGTTCTTCAGTTCTTTTGAA 60.494 41.667 0.00 0.00 35.84 2.69
2591 2623 9.167311 GTTCAGATTGATTGTAGTTACAGGAAT 57.833 33.333 0.00 0.00 37.52 3.01
2596 2628 4.634004 TGATTGTAGTTACAGGAATTGCGG 59.366 41.667 0.00 0.00 37.52 5.69
2597 2629 2.352388 TGTAGTTACAGGAATTGCGGC 58.648 47.619 0.00 0.00 0.00 6.53
2602 2634 0.519519 TACAGGAATTGCGGCGTTTG 59.480 50.000 9.37 0.00 0.00 2.93
2615 2656 0.452122 GCGTTTGACGGACGAATTGG 60.452 55.000 0.00 0.00 42.82 3.16
2630 2671 0.816825 ATTGGCGCACAGATAGCAGG 60.817 55.000 10.83 0.00 0.00 4.85
2642 2683 4.760204 ACAGATAGCAGGGTAAAAACACAC 59.240 41.667 0.00 0.00 0.00 3.82
2643 2684 4.156008 CAGATAGCAGGGTAAAAACACACC 59.844 45.833 0.00 0.00 0.00 4.16
2676 2721 3.181451 TGACTTGCATTGTGAGAGAGGTT 60.181 43.478 0.00 0.00 0.00 3.50
2728 2781 9.518906 CATAATCTATAGTGATCTGTGATCTGC 57.481 37.037 8.71 2.96 0.00 4.26
2729 2782 7.536159 AATCTATAGTGATCTGTGATCTGCA 57.464 36.000 8.71 0.00 0.00 4.41
2732 2785 8.641498 TCTATAGTGATCTGTGATCTGCATAA 57.359 34.615 8.71 0.00 0.00 1.90
2733 2786 8.518702 TCTATAGTGATCTGTGATCTGCATAAC 58.481 37.037 8.71 0.00 0.00 1.89
2734 2787 5.611128 AGTGATCTGTGATCTGCATAACT 57.389 39.130 8.71 1.04 0.00 2.24
2735 2788 5.599732 AGTGATCTGTGATCTGCATAACTC 58.400 41.667 8.71 0.00 0.00 3.01
2736 2789 4.443725 GTGATCTGTGATCTGCATAACTCG 59.556 45.833 8.71 0.00 0.00 4.18
2737 2790 2.814269 TCTGTGATCTGCATAACTCGC 58.186 47.619 0.00 0.00 0.00 5.03
2738 2791 2.428530 TCTGTGATCTGCATAACTCGCT 59.571 45.455 0.00 0.00 0.00 4.93
2739 2792 3.632145 TCTGTGATCTGCATAACTCGCTA 59.368 43.478 0.00 0.00 0.00 4.26
2740 2793 4.097892 TCTGTGATCTGCATAACTCGCTAA 59.902 41.667 0.00 0.00 0.00 3.09
2741 2794 4.112634 TGTGATCTGCATAACTCGCTAAC 58.887 43.478 0.00 0.00 0.00 2.34
2742 2795 4.112634 GTGATCTGCATAACTCGCTAACA 58.887 43.478 0.00 0.00 0.00 2.41
2743 2796 4.566759 GTGATCTGCATAACTCGCTAACAA 59.433 41.667 0.00 0.00 0.00 2.83
2744 2797 4.805719 TGATCTGCATAACTCGCTAACAAG 59.194 41.667 0.00 0.00 0.00 3.16
2745 2798 4.188247 TCTGCATAACTCGCTAACAAGT 57.812 40.909 0.00 0.00 0.00 3.16
2746 2799 5.319140 TCTGCATAACTCGCTAACAAGTA 57.681 39.130 0.00 0.00 0.00 2.24
2747 2800 5.100259 TCTGCATAACTCGCTAACAAGTAC 58.900 41.667 0.00 0.00 0.00 2.73
2748 2801 5.068234 TGCATAACTCGCTAACAAGTACT 57.932 39.130 0.00 0.00 0.00 2.73
2749 2802 6.094464 TCTGCATAACTCGCTAACAAGTACTA 59.906 38.462 0.00 0.00 0.00 1.82
2750 2803 6.802608 TGCATAACTCGCTAACAAGTACTAT 58.197 36.000 0.00 0.00 0.00 2.12
2751 2804 7.933396 TGCATAACTCGCTAACAAGTACTATA 58.067 34.615 0.00 0.00 0.00 1.31
2752 2805 7.859377 TGCATAACTCGCTAACAAGTACTATAC 59.141 37.037 0.00 0.00 0.00 1.47
2753 2806 8.074972 GCATAACTCGCTAACAAGTACTATACT 58.925 37.037 0.00 0.00 41.73 2.12
2754 2807 9.596677 CATAACTCGCTAACAAGTACTATACTC 57.403 37.037 0.00 0.00 38.26 2.59
2755 2808 7.862512 AACTCGCTAACAAGTACTATACTCT 57.137 36.000 0.00 0.00 38.26 3.24
2756 2809 8.954950 AACTCGCTAACAAGTACTATACTCTA 57.045 34.615 0.00 0.00 38.26 2.43
2757 2810 8.364129 ACTCGCTAACAAGTACTATACTCTAC 57.636 38.462 0.00 0.00 38.26 2.59
2758 2811 7.984050 ACTCGCTAACAAGTACTATACTCTACA 59.016 37.037 0.00 0.00 38.26 2.74
2759 2812 8.722480 TCGCTAACAAGTACTATACTCTACAA 57.278 34.615 0.00 0.00 38.26 2.41
2760 2813 9.334947 TCGCTAACAAGTACTATACTCTACAAT 57.665 33.333 0.00 0.00 38.26 2.71
2805 2858 3.311048 GGCAACTTAGAAGCTACTCATGC 59.689 47.826 0.00 0.00 0.00 4.06
2816 2869 3.126000 AGCTACTCATGCGAAAAAGAAGC 59.874 43.478 0.00 0.00 35.28 3.86
2817 2870 3.120199 GCTACTCATGCGAAAAAGAAGCA 60.120 43.478 0.00 0.00 45.46 3.91
2824 2880 2.100584 TGCGAAAAAGAAGCATGGTTGT 59.899 40.909 16.18 8.41 35.81 3.32
2841 2897 7.066284 GCATGGTTGTACTTTCTGAAGATACAT 59.934 37.037 13.37 1.29 36.69 2.29
2886 2948 4.320935 GGTAAACTGCTGTGGTTACCATTG 60.321 45.833 22.68 4.78 35.28 2.82
2891 2953 4.161377 ACTGCTGTGGTTACCATTGTTTTT 59.839 37.500 7.58 0.00 35.28 1.94
2912 2974 2.575735 TGAGATTTGCCATGTCCCTACA 59.424 45.455 0.00 0.00 40.69 2.74
2960 3029 4.751600 TCCGCTGTCATAATTAGCATTCAG 59.248 41.667 0.00 0.00 37.29 3.02
3007 3076 1.272092 TGGAGAAAATCAGGTGCCTGG 60.272 52.381 17.23 0.00 43.75 4.45
3008 3077 1.272147 GGAGAAAATCAGGTGCCTGGT 60.272 52.381 17.23 8.32 43.75 4.00
3090 3159 8.013378 TGGACGTTTCGAATTCTTTTCTTAATC 58.987 33.333 0.00 0.00 0.00 1.75
3092 3161 8.095937 ACGTTTCGAATTCTTTTCTTAATCCT 57.904 30.769 0.00 0.00 0.00 3.24
3115 3187 1.396607 GGTCGGTTGGCCTTGGTTTT 61.397 55.000 3.32 0.00 0.00 2.43
3116 3188 0.249280 GTCGGTTGGCCTTGGTTTTG 60.249 55.000 3.32 0.00 0.00 2.44
3117 3189 0.684805 TCGGTTGGCCTTGGTTTTGT 60.685 50.000 3.32 0.00 0.00 2.83
3119 3191 0.179059 GGTTGGCCTTGGTTTTGTGG 60.179 55.000 3.32 0.00 0.00 4.17
3120 3192 0.827368 GTTGGCCTTGGTTTTGTGGA 59.173 50.000 3.32 0.00 0.00 4.02
3121 3193 1.118838 TTGGCCTTGGTTTTGTGGAG 58.881 50.000 3.32 0.00 0.00 3.86
3122 3194 0.758685 TGGCCTTGGTTTTGTGGAGG 60.759 55.000 3.32 0.00 0.00 4.30
3123 3195 0.759060 GGCCTTGGTTTTGTGGAGGT 60.759 55.000 0.00 0.00 0.00 3.85
3124 3196 0.389025 GCCTTGGTTTTGTGGAGGTG 59.611 55.000 0.00 0.00 0.00 4.00
3125 3197 2.026905 GCCTTGGTTTTGTGGAGGTGA 61.027 52.381 0.00 0.00 0.00 4.02
3126 3198 2.597455 CCTTGGTTTTGTGGAGGTGAT 58.403 47.619 0.00 0.00 0.00 3.06
3139 3211 1.277557 GAGGTGATGGTGAGCTGTTCT 59.722 52.381 0.00 0.00 0.00 3.01
3164 3236 1.767692 GGATCAAGGTGGTGGTGGT 59.232 57.895 0.00 0.00 0.00 4.16
3165 3237 0.609131 GGATCAAGGTGGTGGTGGTG 60.609 60.000 0.00 0.00 0.00 4.17
3166 3238 0.609131 GATCAAGGTGGTGGTGGTGG 60.609 60.000 0.00 0.00 0.00 4.61
3179 3251 2.740055 GGTGGACTCTGCGTGCTG 60.740 66.667 0.00 0.00 34.66 4.41
3219 3292 2.061028 GTTGCATTTACAGGCTGTTGC 58.939 47.619 27.61 27.61 33.53 4.17
3220 3293 1.619654 TGCATTTACAGGCTGTTGCT 58.380 45.000 31.46 14.60 33.93 3.91
3239 3314 1.298014 GCAGCAGTAGTTGGGCTCT 59.702 57.895 0.00 0.00 35.27 4.09
3241 3316 0.459237 CAGCAGTAGTTGGGCTCTCG 60.459 60.000 0.00 0.00 35.27 4.04
3242 3317 1.811679 GCAGTAGTTGGGCTCTCGC 60.812 63.158 0.00 0.00 0.00 5.03
3243 3318 1.591703 CAGTAGTTGGGCTCTCGCA 59.408 57.895 0.00 0.00 38.10 5.10
3244 3319 0.459237 CAGTAGTTGGGCTCTCGCAG 60.459 60.000 0.00 0.00 38.10 5.18
3245 3320 0.900647 AGTAGTTGGGCTCTCGCAGT 60.901 55.000 0.00 0.00 38.10 4.40
3246 3321 0.037232 GTAGTTGGGCTCTCGCAGTT 60.037 55.000 0.00 0.00 38.10 3.16
3247 3322 0.246635 TAGTTGGGCTCTCGCAGTTC 59.753 55.000 0.00 0.00 38.10 3.01
3248 3323 2.035442 GTTGGGCTCTCGCAGTTCC 61.035 63.158 0.00 0.00 38.10 3.62
3249 3324 2.515979 TTGGGCTCTCGCAGTTCCA 61.516 57.895 0.00 0.00 38.10 3.53
3250 3325 2.435059 GGGCTCTCGCAGTTCCAC 60.435 66.667 0.00 0.00 38.10 4.02
3251 3326 2.659610 GGCTCTCGCAGTTCCACT 59.340 61.111 0.00 0.00 38.10 4.00
3252 3327 1.004440 GGCTCTCGCAGTTCCACTT 60.004 57.895 0.00 0.00 38.10 3.16
3264 3339 3.812053 CAGTTCCACTTCTTCTTCCACTG 59.188 47.826 0.00 0.00 0.00 3.66
3269 3344 2.746362 CACTTCTTCTTCCACTGGATGC 59.254 50.000 0.00 0.00 0.00 3.91
3294 3369 0.728466 GCGACAGTACACGGTGAGAC 60.728 60.000 16.29 11.96 0.00 3.36
3295 3370 0.109873 CGACAGTACACGGTGAGACC 60.110 60.000 16.29 0.00 34.05 3.85
3306 3381 2.825861 GGTGAGACCGTCTAACCAAA 57.174 50.000 25.32 0.00 45.72 3.28
3307 3382 3.329929 GGTGAGACCGTCTAACCAAAT 57.670 47.619 25.32 0.00 45.72 2.32
3308 3383 4.460948 GGTGAGACCGTCTAACCAAATA 57.539 45.455 25.32 0.00 45.72 1.40
3309 3384 5.019785 GGTGAGACCGTCTAACCAAATAT 57.980 43.478 25.32 0.00 45.72 1.28
3310 3385 5.425630 GGTGAGACCGTCTAACCAAATATT 58.574 41.667 25.32 0.00 45.72 1.28
3311 3386 6.576185 GGTGAGACCGTCTAACCAAATATTA 58.424 40.000 25.32 0.00 45.72 0.98
3312 3387 6.478016 GGTGAGACCGTCTAACCAAATATTAC 59.522 42.308 25.32 0.00 45.72 1.89
3313 3388 7.037438 GTGAGACCGTCTAACCAAATATTACA 58.963 38.462 4.79 0.00 0.00 2.41
3314 3389 7.222224 GTGAGACCGTCTAACCAAATATTACAG 59.778 40.741 4.79 0.00 0.00 2.74
3315 3390 7.093640 TGAGACCGTCTAACCAAATATTACAGT 60.094 37.037 0.00 0.00 0.00 3.55
3316 3391 7.263496 AGACCGTCTAACCAAATATTACAGTC 58.737 38.462 0.00 0.00 0.00 3.51
3317 3392 7.123847 AGACCGTCTAACCAAATATTACAGTCT 59.876 37.037 0.00 0.00 0.00 3.24
3318 3393 7.263496 ACCGTCTAACCAAATATTACAGTCTC 58.737 38.462 0.00 0.00 0.00 3.36
3319 3394 7.093640 ACCGTCTAACCAAATATTACAGTCTCA 60.094 37.037 0.00 0.00 0.00 3.27
3320 3395 7.762615 CCGTCTAACCAAATATTACAGTCTCAA 59.237 37.037 0.00 0.00 0.00 3.02
3321 3396 8.592998 CGTCTAACCAAATATTACAGTCTCAAC 58.407 37.037 0.00 0.00 0.00 3.18
3322 3397 8.592998 GTCTAACCAAATATTACAGTCTCAACG 58.407 37.037 0.00 0.00 0.00 4.10
3323 3398 8.525316 TCTAACCAAATATTACAGTCTCAACGA 58.475 33.333 0.00 0.00 0.00 3.85
3324 3399 9.314321 CTAACCAAATATTACAGTCTCAACGAT 57.686 33.333 0.00 0.00 0.00 3.73
3325 3400 7.772332 ACCAAATATTACAGTCTCAACGATC 57.228 36.000 0.00 0.00 0.00 3.69
3326 3401 7.327975 ACCAAATATTACAGTCTCAACGATCA 58.672 34.615 0.00 0.00 0.00 2.92
3327 3402 7.987458 ACCAAATATTACAGTCTCAACGATCAT 59.013 33.333 0.00 0.00 0.00 2.45
3328 3403 8.278408 CCAAATATTACAGTCTCAACGATCATG 58.722 37.037 0.00 0.00 0.00 3.07
3329 3404 7.413475 AATATTACAGTCTCAACGATCATGC 57.587 36.000 0.00 0.00 0.00 4.06
3330 3405 2.749280 ACAGTCTCAACGATCATGCA 57.251 45.000 0.00 0.00 0.00 3.96
3331 3406 2.614779 ACAGTCTCAACGATCATGCAG 58.385 47.619 0.00 0.00 0.00 4.41
3332 3407 2.028658 ACAGTCTCAACGATCATGCAGT 60.029 45.455 0.00 0.00 0.00 4.40
3333 3408 2.347755 CAGTCTCAACGATCATGCAGTG 59.652 50.000 0.00 0.00 0.00 3.66
3334 3409 2.028658 AGTCTCAACGATCATGCAGTGT 60.029 45.455 0.00 0.00 0.00 3.55
3335 3410 2.093310 GTCTCAACGATCATGCAGTGTG 59.907 50.000 0.00 0.00 0.00 3.82
3336 3411 1.395954 CTCAACGATCATGCAGTGTGG 59.604 52.381 0.00 0.00 0.00 4.17
3337 3412 1.159285 CAACGATCATGCAGTGTGGT 58.841 50.000 0.00 0.00 0.00 4.16
3338 3413 1.135888 CAACGATCATGCAGTGTGGTG 60.136 52.381 0.00 0.00 0.00 4.17
3339 3414 0.035317 ACGATCATGCAGTGTGGTGT 59.965 50.000 0.00 0.00 0.00 4.16
3340 3415 1.275010 ACGATCATGCAGTGTGGTGTA 59.725 47.619 0.00 0.00 0.00 2.90
3341 3416 2.093500 ACGATCATGCAGTGTGGTGTAT 60.093 45.455 0.00 0.00 0.00 2.29
3342 3417 3.132111 ACGATCATGCAGTGTGGTGTATA 59.868 43.478 0.00 0.00 0.00 1.47
3343 3418 3.737774 CGATCATGCAGTGTGGTGTATAG 59.262 47.826 0.00 0.00 0.00 1.31
3344 3419 4.697514 GATCATGCAGTGTGGTGTATAGT 58.302 43.478 0.00 0.00 0.00 2.12
3345 3420 5.507315 CGATCATGCAGTGTGGTGTATAGTA 60.507 44.000 0.00 0.00 0.00 1.82
3346 3421 5.006153 TCATGCAGTGTGGTGTATAGTAC 57.994 43.478 0.00 0.00 0.00 2.73
3347 3422 3.880047 TGCAGTGTGGTGTATAGTACC 57.120 47.619 0.00 0.11 38.71 3.34
3348 3423 3.166679 TGCAGTGTGGTGTATAGTACCA 58.833 45.455 4.97 4.97 45.52 3.25
3358 3433 7.983166 TGGTGTATAGTACCATCTAACCTTT 57.017 36.000 4.97 0.00 43.00 3.11
3359 3434 8.015185 TGGTGTATAGTACCATCTAACCTTTC 57.985 38.462 4.97 0.00 43.00 2.62
3360 3435 7.620491 TGGTGTATAGTACCATCTAACCTTTCA 59.380 37.037 4.97 0.00 43.00 2.69
3361 3436 8.480501 GGTGTATAGTACCATCTAACCTTTCAA 58.519 37.037 2.01 0.00 38.12 2.69
3362 3437 9.880157 GTGTATAGTACCATCTAACCTTTCAAA 57.120 33.333 0.00 0.00 0.00 2.69
3366 3441 7.745620 AGTACCATCTAACCTTTCAAAACAG 57.254 36.000 0.00 0.00 0.00 3.16
3367 3442 7.287810 AGTACCATCTAACCTTTCAAAACAGT 58.712 34.615 0.00 0.00 0.00 3.55
3368 3443 6.635030 ACCATCTAACCTTTCAAAACAGTC 57.365 37.500 0.00 0.00 0.00 3.51
3369 3444 6.365520 ACCATCTAACCTTTCAAAACAGTCT 58.634 36.000 0.00 0.00 0.00 3.24
3370 3445 7.514721 ACCATCTAACCTTTCAAAACAGTCTA 58.485 34.615 0.00 0.00 0.00 2.59
3371 3446 7.996644 ACCATCTAACCTTTCAAAACAGTCTAA 59.003 33.333 0.00 0.00 0.00 2.10
3372 3447 8.507249 CCATCTAACCTTTCAAAACAGTCTAAG 58.493 37.037 0.00 0.00 0.00 2.18
3373 3448 9.273016 CATCTAACCTTTCAAAACAGTCTAAGA 57.727 33.333 0.00 0.00 0.00 2.10
3374 3449 8.888579 TCTAACCTTTCAAAACAGTCTAAGAG 57.111 34.615 0.00 0.00 0.00 2.85
3375 3450 8.701895 TCTAACCTTTCAAAACAGTCTAAGAGA 58.298 33.333 0.00 0.00 0.00 3.10
3376 3451 9.326413 CTAACCTTTCAAAACAGTCTAAGAGAA 57.674 33.333 0.00 0.00 0.00 2.87
3377 3452 8.575649 AACCTTTCAAAACAGTCTAAGAGAAA 57.424 30.769 0.00 0.00 0.00 2.52
3378 3453 7.986562 ACCTTTCAAAACAGTCTAAGAGAAAC 58.013 34.615 0.00 0.00 0.00 2.78
3379 3454 7.829706 ACCTTTCAAAACAGTCTAAGAGAAACT 59.170 33.333 0.00 0.00 0.00 2.66
3380 3455 8.338986 CCTTTCAAAACAGTCTAAGAGAAACTC 58.661 37.037 0.00 0.00 0.00 3.01
3381 3456 7.787725 TTCAAAACAGTCTAAGAGAAACTCC 57.212 36.000 0.00 0.00 0.00 3.85
3382 3457 6.884832 TCAAAACAGTCTAAGAGAAACTCCA 58.115 36.000 0.00 0.00 0.00 3.86
3383 3458 7.335627 TCAAAACAGTCTAAGAGAAACTCCAA 58.664 34.615 0.00 0.00 0.00 3.53
3384 3459 7.280205 TCAAAACAGTCTAAGAGAAACTCCAAC 59.720 37.037 0.00 0.00 0.00 3.77
3385 3460 5.871396 ACAGTCTAAGAGAAACTCCAACA 57.129 39.130 0.00 0.00 0.00 3.33
3386 3461 5.848406 ACAGTCTAAGAGAAACTCCAACAG 58.152 41.667 0.00 0.00 0.00 3.16
3387 3462 4.688413 CAGTCTAAGAGAAACTCCAACAGC 59.312 45.833 0.00 0.00 0.00 4.40
3388 3463 4.591072 AGTCTAAGAGAAACTCCAACAGCT 59.409 41.667 0.00 0.00 0.00 4.24
3389 3464 4.926832 GTCTAAGAGAAACTCCAACAGCTC 59.073 45.833 0.00 0.00 0.00 4.09
3390 3465 2.849294 AGAGAAACTCCAACAGCTCC 57.151 50.000 0.00 0.00 0.00 4.70
3391 3466 1.349357 AGAGAAACTCCAACAGCTCCC 59.651 52.381 0.00 0.00 0.00 4.30
3392 3467 1.349357 GAGAAACTCCAACAGCTCCCT 59.651 52.381 0.00 0.00 0.00 4.20
3393 3468 1.777272 AGAAACTCCAACAGCTCCCTT 59.223 47.619 0.00 0.00 0.00 3.95
3394 3469 1.882623 GAAACTCCAACAGCTCCCTTG 59.117 52.381 0.00 0.00 0.00 3.61
3395 3470 1.140312 AACTCCAACAGCTCCCTTGA 58.860 50.000 0.00 0.00 0.00 3.02
3396 3471 1.140312 ACTCCAACAGCTCCCTTGAA 58.860 50.000 0.00 0.00 0.00 2.69
3397 3472 1.494721 ACTCCAACAGCTCCCTTGAAA 59.505 47.619 0.00 0.00 0.00 2.69
3398 3473 2.091885 ACTCCAACAGCTCCCTTGAAAA 60.092 45.455 0.00 0.00 0.00 2.29
3399 3474 2.958355 CTCCAACAGCTCCCTTGAAAAA 59.042 45.455 0.00 0.00 0.00 1.94
3400 3475 2.693074 TCCAACAGCTCCCTTGAAAAAC 59.307 45.455 0.00 0.00 0.00 2.43
3401 3476 2.695147 CCAACAGCTCCCTTGAAAAACT 59.305 45.455 0.00 0.00 0.00 2.66
3402 3477 3.132824 CCAACAGCTCCCTTGAAAAACTT 59.867 43.478 0.00 0.00 0.00 2.66
3403 3478 4.363138 CAACAGCTCCCTTGAAAAACTTC 58.637 43.478 0.00 0.00 0.00 3.01
3404 3479 2.959030 ACAGCTCCCTTGAAAAACTTCC 59.041 45.455 0.00 0.00 0.00 3.46
3405 3480 2.297315 CAGCTCCCTTGAAAAACTTCCC 59.703 50.000 0.00 0.00 0.00 3.97
3406 3481 1.269723 GCTCCCTTGAAAAACTTCCCG 59.730 52.381 0.00 0.00 0.00 5.14
3407 3482 2.583143 CTCCCTTGAAAAACTTCCCGT 58.417 47.619 0.00 0.00 0.00 5.28
3408 3483 3.746940 CTCCCTTGAAAAACTTCCCGTA 58.253 45.455 0.00 0.00 0.00 4.02
3409 3484 4.139038 CTCCCTTGAAAAACTTCCCGTAA 58.861 43.478 0.00 0.00 0.00 3.18
3410 3485 4.534797 TCCCTTGAAAAACTTCCCGTAAA 58.465 39.130 0.00 0.00 0.00 2.01
3411 3486 4.954826 TCCCTTGAAAAACTTCCCGTAAAA 59.045 37.500 0.00 0.00 0.00 1.52
3412 3487 5.045215 CCCTTGAAAAACTTCCCGTAAAAC 58.955 41.667 0.00 0.00 0.00 2.43
3413 3488 5.163488 CCCTTGAAAAACTTCCCGTAAAACT 60.163 40.000 0.00 0.00 0.00 2.66
3414 3489 5.746721 CCTTGAAAAACTTCCCGTAAAACTG 59.253 40.000 0.00 0.00 0.00 3.16
3415 3490 6.404954 CCTTGAAAAACTTCCCGTAAAACTGA 60.405 38.462 0.00 0.00 0.00 3.41
3416 3491 6.702716 TGAAAAACTTCCCGTAAAACTGAT 57.297 33.333 0.00 0.00 0.00 2.90
3417 3492 7.102847 TGAAAAACTTCCCGTAAAACTGATT 57.897 32.000 0.00 0.00 0.00 2.57
3418 3493 7.548967 TGAAAAACTTCCCGTAAAACTGATTT 58.451 30.769 0.00 0.00 34.92 2.17
3419 3494 8.035984 TGAAAAACTTCCCGTAAAACTGATTTT 58.964 29.630 0.00 0.00 41.07 1.82
3420 3495 9.518906 GAAAAACTTCCCGTAAAACTGATTTTA 57.481 29.630 0.00 0.00 38.91 1.52
3422 3497 9.471084 AAAACTTCCCGTAAAACTGATTTTATG 57.529 29.630 5.22 5.22 41.25 1.90
3423 3498 7.754851 ACTTCCCGTAAAACTGATTTTATGT 57.245 32.000 9.66 0.00 42.27 2.29
3424 3499 8.851541 ACTTCCCGTAAAACTGATTTTATGTA 57.148 30.769 9.66 0.00 42.27 2.29
3425 3500 9.287373 ACTTCCCGTAAAACTGATTTTATGTAA 57.713 29.630 9.66 4.81 42.27 2.41
3458 3533 8.727910 GGAATGACCGTAAAATTTAGAGAAAGT 58.272 33.333 0.00 0.00 0.00 2.66
3460 3535 9.893305 AATGACCGTAAAATTTAGAGAAAGTTG 57.107 29.630 0.00 0.00 33.35 3.16
3461 3536 8.441312 TGACCGTAAAATTTAGAGAAAGTTGT 57.559 30.769 0.00 0.00 33.35 3.32
3462 3537 8.553696 TGACCGTAAAATTTAGAGAAAGTTGTC 58.446 33.333 0.00 0.00 33.35 3.18
3463 3538 7.570161 ACCGTAAAATTTAGAGAAAGTTGTCG 58.430 34.615 0.00 0.00 33.35 4.35
3464 3539 7.439056 ACCGTAAAATTTAGAGAAAGTTGTCGA 59.561 33.333 0.00 0.00 33.35 4.20
3465 3540 8.277713 CCGTAAAATTTAGAGAAAGTTGTCGAA 58.722 33.333 0.00 0.00 33.35 3.71
3466 3541 9.640974 CGTAAAATTTAGAGAAAGTTGTCGAAA 57.359 29.630 0.00 0.29 33.35 3.46
3468 3543 8.561932 AAAATTTAGAGAAAGTTGTCGAAAGC 57.438 30.769 0.00 0.00 33.35 3.51
3469 3544 7.497925 AATTTAGAGAAAGTTGTCGAAAGCT 57.502 32.000 0.00 0.00 31.02 3.74
3470 3545 8.603242 AATTTAGAGAAAGTTGTCGAAAGCTA 57.397 30.769 0.00 0.00 31.02 3.32
3471 3546 7.404139 TTTAGAGAAAGTTGTCGAAAGCTAC 57.596 36.000 0.00 0.00 0.00 3.58
3472 3547 5.203060 AGAGAAAGTTGTCGAAAGCTACT 57.797 39.130 0.00 0.00 0.00 2.57
3473 3548 5.602628 AGAGAAAGTTGTCGAAAGCTACTT 58.397 37.500 0.00 0.00 35.89 2.24
3474 3549 6.049790 AGAGAAAGTTGTCGAAAGCTACTTT 58.950 36.000 11.76 11.76 41.45 2.66
3475 3550 6.539103 AGAGAAAGTTGTCGAAAGCTACTTTT 59.461 34.615 12.71 6.07 40.20 2.27
3476 3551 7.709613 AGAGAAAGTTGTCGAAAGCTACTTTTA 59.290 33.333 12.71 0.00 40.20 1.52
3477 3552 8.379457 AGAAAGTTGTCGAAAGCTACTTTTAT 57.621 30.769 12.71 5.55 40.20 1.40
3478 3553 8.496751 AGAAAGTTGTCGAAAGCTACTTTTATC 58.503 33.333 12.71 4.32 40.20 1.75
3479 3554 7.724305 AAGTTGTCGAAAGCTACTTTTATCA 57.276 32.000 0.00 0.00 33.49 2.15
3480 3555 7.724305 AGTTGTCGAAAGCTACTTTTATCAA 57.276 32.000 0.00 0.00 33.49 2.57
3481 3556 8.324163 AGTTGTCGAAAGCTACTTTTATCAAT 57.676 30.769 0.00 0.00 33.49 2.57
3482 3557 8.784043 AGTTGTCGAAAGCTACTTTTATCAATT 58.216 29.630 0.00 0.00 33.49 2.32
3483 3558 9.052080 GTTGTCGAAAGCTACTTTTATCAATTC 57.948 33.333 0.00 0.00 33.49 2.17
3484 3559 7.748847 TGTCGAAAGCTACTTTTATCAATTCC 58.251 34.615 0.00 0.00 33.49 3.01
3485 3560 7.389330 TGTCGAAAGCTACTTTTATCAATTCCA 59.611 33.333 0.00 0.00 33.49 3.53
3486 3561 7.905493 GTCGAAAGCTACTTTTATCAATTCCAG 59.095 37.037 0.00 0.00 33.49 3.86
3487 3562 7.606456 TCGAAAGCTACTTTTATCAATTCCAGT 59.394 33.333 0.00 0.00 33.49 4.00
3488 3563 8.879759 CGAAAGCTACTTTTATCAATTCCAGTA 58.120 33.333 0.00 0.00 33.49 2.74
3492 3567 9.740710 AGCTACTTTTATCAATTCCAGTAAACT 57.259 29.630 0.00 0.00 0.00 2.66
3543 3618 4.917906 AATAGATGATGGCTTAGGACCC 57.082 45.455 0.00 0.00 0.00 4.46
3544 3619 1.051812 AGATGATGGCTTAGGACCCG 58.948 55.000 0.00 0.00 0.00 5.28
3545 3620 0.603975 GATGATGGCTTAGGACCCGC 60.604 60.000 0.00 0.00 0.00 6.13
3546 3621 2.056906 ATGATGGCTTAGGACCCGCC 62.057 60.000 9.52 9.52 44.02 6.13
3549 3624 3.400054 GGCTTAGGACCCGCCAGT 61.400 66.667 11.16 0.00 43.25 4.00
3550 3625 2.187163 GCTTAGGACCCGCCAGTC 59.813 66.667 0.00 0.00 40.02 3.51
3551 3626 2.656069 GCTTAGGACCCGCCAGTCA 61.656 63.158 3.43 0.00 38.59 3.41
3552 3627 1.517832 CTTAGGACCCGCCAGTCAG 59.482 63.158 3.43 0.00 38.59 3.51
3553 3628 1.229082 TTAGGACCCGCCAGTCAGT 60.229 57.895 3.43 0.00 38.59 3.41
3554 3629 0.040058 TTAGGACCCGCCAGTCAGTA 59.960 55.000 3.43 0.00 38.59 2.74
3555 3630 0.395311 TAGGACCCGCCAGTCAGTAG 60.395 60.000 3.43 0.00 38.59 2.57
3556 3631 2.184579 GACCCGCCAGTCAGTAGC 59.815 66.667 0.00 0.00 36.73 3.58
3557 3632 2.603473 ACCCGCCAGTCAGTAGCA 60.603 61.111 0.00 0.00 0.00 3.49
3558 3633 2.125512 CCCGCCAGTCAGTAGCAC 60.126 66.667 0.00 0.00 0.00 4.40
3559 3634 2.507102 CCGCCAGTCAGTAGCACG 60.507 66.667 0.00 0.00 0.00 5.34
3560 3635 2.258591 CGCCAGTCAGTAGCACGT 59.741 61.111 0.00 0.00 0.00 4.49
3561 3636 2.088763 CGCCAGTCAGTAGCACGTG 61.089 63.158 12.28 12.28 0.00 4.49
3562 3637 1.006102 GCCAGTCAGTAGCACGTGT 60.006 57.895 18.38 6.65 0.00 4.49
3563 3638 1.284982 GCCAGTCAGTAGCACGTGTG 61.285 60.000 18.38 7.51 0.00 3.82
3564 3639 0.313987 CCAGTCAGTAGCACGTGTGA 59.686 55.000 18.38 9.99 0.00 3.58
3565 3640 1.409412 CAGTCAGTAGCACGTGTGAC 58.591 55.000 22.60 22.60 39.74 3.67
3614 3689 4.767255 GGGACAGCCGCCAGTGAG 62.767 72.222 0.00 0.00 33.83 3.51
3615 3690 4.767255 GGACAGCCGCCAGTGAGG 62.767 72.222 0.00 0.00 41.84 3.86
3616 3691 4.767255 GACAGCCGCCAGTGAGGG 62.767 72.222 6.72 1.53 38.09 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.046374 ACTATTATGTTCCCCCGAAGCT 58.954 45.455 0.00 0.00 0.00 3.74
3 4 3.487120 ACTATTATGTTCCCCCGAAGC 57.513 47.619 0.00 0.00 0.00 3.86
4 5 4.777463 ACAACTATTATGTTCCCCCGAAG 58.223 43.478 0.00 0.00 0.00 3.79
5 6 4.847990 ACAACTATTATGTTCCCCCGAA 57.152 40.909 0.00 0.00 0.00 4.30
6 7 4.773013 GAACAACTATTATGTTCCCCCGA 58.227 43.478 7.92 0.00 46.94 5.14
15 16 7.119846 GCCCTAAGCTATGGAACAACTATTATG 59.880 40.741 6.50 0.00 40.03 1.90
16 17 7.168905 GCCCTAAGCTATGGAACAACTATTAT 58.831 38.462 6.50 0.00 40.03 1.28
17 18 6.531021 GCCCTAAGCTATGGAACAACTATTA 58.469 40.000 6.50 0.00 40.03 0.98
18 19 5.377478 GCCCTAAGCTATGGAACAACTATT 58.623 41.667 6.50 0.00 40.03 1.73
19 20 4.974399 GCCCTAAGCTATGGAACAACTAT 58.026 43.478 6.50 0.00 40.03 2.12
20 21 4.417426 GCCCTAAGCTATGGAACAACTA 57.583 45.455 6.50 0.00 40.03 2.24
21 22 3.283259 GCCCTAAGCTATGGAACAACT 57.717 47.619 6.50 0.00 40.03 3.16
33 34 2.344878 CTGCCCCCTAAGCCCTAAGC 62.345 65.000 0.00 0.00 44.25 3.09
34 35 0.694444 TCTGCCCCCTAAGCCCTAAG 60.694 60.000 0.00 0.00 0.00 2.18
35 36 0.253441 TTCTGCCCCCTAAGCCCTAA 60.253 55.000 0.00 0.00 0.00 2.69
36 37 0.253441 TTTCTGCCCCCTAAGCCCTA 60.253 55.000 0.00 0.00 0.00 3.53
37 38 1.146544 TTTTCTGCCCCCTAAGCCCT 61.147 55.000 0.00 0.00 0.00 5.19
38 39 0.970937 GTTTTCTGCCCCCTAAGCCC 60.971 60.000 0.00 0.00 0.00 5.19
39 40 0.970937 GGTTTTCTGCCCCCTAAGCC 60.971 60.000 0.00 0.00 0.00 4.35
40 41 0.251608 TGGTTTTCTGCCCCCTAAGC 60.252 55.000 0.00 0.00 0.00 3.09
41 42 1.075536 AGTGGTTTTCTGCCCCCTAAG 59.924 52.381 0.00 0.00 0.00 2.18
42 43 1.154430 AGTGGTTTTCTGCCCCCTAA 58.846 50.000 0.00 0.00 0.00 2.69
43 44 1.154430 AAGTGGTTTTCTGCCCCCTA 58.846 50.000 0.00 0.00 0.00 3.53
44 45 0.264657 AAAGTGGTTTTCTGCCCCCT 59.735 50.000 0.00 0.00 0.00 4.79
45 46 1.070134 GAAAAGTGGTTTTCTGCCCCC 59.930 52.381 3.82 0.00 45.60 5.40
46 47 2.526304 GAAAAGTGGTTTTCTGCCCC 57.474 50.000 3.82 0.00 45.60 5.80
52 53 6.687531 GTTTTCGAGAGAGAAAAGTGGTTTTC 59.312 38.462 5.29 2.95 46.70 2.29
53 54 6.150474 TGTTTTCGAGAGAGAAAAGTGGTTTT 59.850 34.615 5.29 0.00 46.70 2.43
54 55 5.646360 TGTTTTCGAGAGAGAAAAGTGGTTT 59.354 36.000 5.29 0.00 46.70 3.27
55 56 5.064834 GTGTTTTCGAGAGAGAAAAGTGGTT 59.935 40.000 5.29 0.00 46.70 3.67
56 57 4.571176 GTGTTTTCGAGAGAGAAAAGTGGT 59.429 41.667 5.29 0.00 46.70 4.16
57 58 4.570772 TGTGTTTTCGAGAGAGAAAAGTGG 59.429 41.667 5.29 0.00 46.70 4.00
58 59 5.718649 TGTGTTTTCGAGAGAGAAAAGTG 57.281 39.130 5.29 0.00 46.70 3.16
59 60 6.371825 ACTTTGTGTTTTCGAGAGAGAAAAGT 59.628 34.615 5.29 8.58 46.70 2.66
60 61 6.776094 ACTTTGTGTTTTCGAGAGAGAAAAG 58.224 36.000 5.29 7.64 46.70 2.27
61 62 6.737254 ACTTTGTGTTTTCGAGAGAGAAAA 57.263 33.333 1.32 1.32 44.79 2.29
62 63 6.737254 AACTTTGTGTTTTCGAGAGAGAAA 57.263 33.333 0.00 0.00 43.69 2.52
63 64 6.542852 CAAACTTTGTGTTTTCGAGAGAGAA 58.457 36.000 0.00 0.00 45.69 2.87
64 65 5.447279 GCAAACTTTGTGTTTTCGAGAGAGA 60.447 40.000 3.48 0.00 45.69 3.10
65 66 4.730521 GCAAACTTTGTGTTTTCGAGAGAG 59.269 41.667 3.48 0.00 45.69 3.20
66 67 4.155099 TGCAAACTTTGTGTTTTCGAGAGA 59.845 37.500 3.48 0.00 45.69 3.10
67 68 4.411327 TGCAAACTTTGTGTTTTCGAGAG 58.589 39.130 3.48 0.00 45.69 3.20
68 69 4.427096 TGCAAACTTTGTGTTTTCGAGA 57.573 36.364 3.48 0.00 45.69 4.04
69 70 5.036737 AGATGCAAACTTTGTGTTTTCGAG 58.963 37.500 3.48 0.00 45.69 4.04
70 71 4.992688 AGATGCAAACTTTGTGTTTTCGA 58.007 34.783 3.48 0.00 45.69 3.71
71 72 6.198687 TCTAGATGCAAACTTTGTGTTTTCG 58.801 36.000 3.48 0.00 45.69 3.46
72 73 8.000285 CATCTAGATGCAAACTTTGTGTTTTC 58.000 34.615 19.47 0.00 46.11 2.29
73 74 7.935338 CATCTAGATGCAAACTTTGTGTTTT 57.065 32.000 19.47 0.00 46.11 2.43
626 627 1.596752 ACGATGTTTGCTCGTGGCA 60.597 52.632 0.00 2.12 46.76 4.92
627 628 3.253955 ACGATGTTTGCTCGTGGC 58.746 55.556 0.00 0.00 46.76 5.01
631 632 2.413112 ACATTCAGACGATGTTTGCTCG 59.587 45.455 0.00 0.00 41.77 5.03
632 633 4.083855 TGAACATTCAGACGATGTTTGCTC 60.084 41.667 2.60 0.00 38.48 4.26
633 634 3.814842 TGAACATTCAGACGATGTTTGCT 59.185 39.130 2.60 0.00 38.48 3.91
634 635 4.145876 TGAACATTCAGACGATGTTTGC 57.854 40.909 2.60 0.00 38.48 3.68
635 636 5.509771 TGTTGAACATTCAGACGATGTTTG 58.490 37.500 0.00 0.33 38.48 2.93
636 637 5.749596 TGTTGAACATTCAGACGATGTTT 57.250 34.783 0.00 0.00 38.48 2.83
637 638 5.749596 TTGTTGAACATTCAGACGATGTT 57.250 34.783 0.00 0.75 40.75 2.71
638 639 5.505654 GGTTTGTTGAACATTCAGACGATGT 60.506 40.000 0.00 0.00 40.13 3.06
639 640 4.911610 GGTTTGTTGAACATTCAGACGATG 59.088 41.667 0.00 0.00 40.13 3.84
640 641 4.319477 CGGTTTGTTGAACATTCAGACGAT 60.319 41.667 0.00 0.00 40.13 3.73
641 642 3.001838 CGGTTTGTTGAACATTCAGACGA 59.998 43.478 0.00 0.00 40.13 4.20
642 643 3.242608 ACGGTTTGTTGAACATTCAGACG 60.243 43.478 0.00 1.73 40.13 4.18
643 644 4.287238 ACGGTTTGTTGAACATTCAGAC 57.713 40.909 0.00 0.00 40.13 3.51
644 645 6.434596 CAATACGGTTTGTTGAACATTCAGA 58.565 36.000 0.00 0.00 40.13 3.27
645 646 5.116983 GCAATACGGTTTGTTGAACATTCAG 59.883 40.000 0.00 0.00 40.13 3.02
646 647 4.979197 GCAATACGGTTTGTTGAACATTCA 59.021 37.500 0.00 0.00 40.13 2.57
647 648 4.087930 CGCAATACGGTTTGTTGAACATTC 59.912 41.667 0.00 0.00 40.13 2.67
648 649 3.978217 CGCAATACGGTTTGTTGAACATT 59.022 39.130 0.00 0.00 40.13 2.71
649 650 3.560503 CGCAATACGGTTTGTTGAACAT 58.439 40.909 0.00 0.00 40.13 2.71
650 651 2.988343 CGCAATACGGTTTGTTGAACA 58.012 42.857 0.00 0.00 40.13 3.18
663 664 1.654105 CGTCAGAACCTCACGCAATAC 59.346 52.381 0.00 0.00 0.00 1.89
664 665 1.542472 TCGTCAGAACCTCACGCAATA 59.458 47.619 0.00 0.00 33.46 1.90
665 666 0.317160 TCGTCAGAACCTCACGCAAT 59.683 50.000 0.00 0.00 33.46 3.56
666 667 0.317160 ATCGTCAGAACCTCACGCAA 59.683 50.000 0.00 0.00 33.46 4.85
667 668 1.135489 GTATCGTCAGAACCTCACGCA 60.135 52.381 0.00 0.00 33.46 5.24
668 669 1.546834 GTATCGTCAGAACCTCACGC 58.453 55.000 0.00 0.00 33.46 5.34
669 670 1.129998 ACGTATCGTCAGAACCTCACG 59.870 52.381 0.00 0.00 33.69 4.35
670 671 2.161012 TCACGTATCGTCAGAACCTCAC 59.839 50.000 0.00 0.00 38.32 3.51
671 672 2.429478 TCACGTATCGTCAGAACCTCA 58.571 47.619 0.00 0.00 38.32 3.86
672 673 3.064958 TCATCACGTATCGTCAGAACCTC 59.935 47.826 0.00 0.00 38.32 3.85
673 674 3.014623 TCATCACGTATCGTCAGAACCT 58.985 45.455 0.00 0.00 38.32 3.50
674 675 3.416119 TCATCACGTATCGTCAGAACC 57.584 47.619 0.00 0.00 38.32 3.62
675 676 4.031426 GGTTTCATCACGTATCGTCAGAAC 59.969 45.833 0.00 0.00 38.32 3.01
676 677 4.082408 AGGTTTCATCACGTATCGTCAGAA 60.082 41.667 0.00 0.00 38.32 3.02
677 678 3.442625 AGGTTTCATCACGTATCGTCAGA 59.557 43.478 0.00 0.00 38.32 3.27
678 679 3.770666 AGGTTTCATCACGTATCGTCAG 58.229 45.455 0.00 0.00 38.32 3.51
679 680 3.861276 AGGTTTCATCACGTATCGTCA 57.139 42.857 0.00 0.00 38.32 4.35
680 681 5.229469 CAGTAAGGTTTCATCACGTATCGTC 59.771 44.000 0.00 0.00 38.32 4.20
681 682 5.100259 CAGTAAGGTTTCATCACGTATCGT 58.900 41.667 0.00 0.00 42.36 3.73
682 683 4.026804 GCAGTAAGGTTTCATCACGTATCG 60.027 45.833 0.00 0.00 0.00 2.92
683 684 5.005779 CAGCAGTAAGGTTTCATCACGTATC 59.994 44.000 0.00 0.00 0.00 2.24
684 685 4.870426 CAGCAGTAAGGTTTCATCACGTAT 59.130 41.667 0.00 0.00 0.00 3.06
685 686 4.021807 TCAGCAGTAAGGTTTCATCACGTA 60.022 41.667 0.00 0.00 0.00 3.57
686 687 3.067106 CAGCAGTAAGGTTTCATCACGT 58.933 45.455 0.00 0.00 0.00 4.49
687 688 3.325870 TCAGCAGTAAGGTTTCATCACG 58.674 45.455 0.00 0.00 0.00 4.35
688 689 5.886960 ATTCAGCAGTAAGGTTTCATCAC 57.113 39.130 0.00 0.00 0.00 3.06
689 690 6.003326 TCAATTCAGCAGTAAGGTTTCATCA 58.997 36.000 0.00 0.00 0.00 3.07
690 691 6.150140 AGTCAATTCAGCAGTAAGGTTTCATC 59.850 38.462 0.00 0.00 0.00 2.92
691 692 6.006449 AGTCAATTCAGCAGTAAGGTTTCAT 58.994 36.000 0.00 0.00 0.00 2.57
692 693 5.239306 CAGTCAATTCAGCAGTAAGGTTTCA 59.761 40.000 0.00 0.00 0.00 2.69
693 694 5.335191 CCAGTCAATTCAGCAGTAAGGTTTC 60.335 44.000 0.00 0.00 0.00 2.78
694 695 4.520492 CCAGTCAATTCAGCAGTAAGGTTT 59.480 41.667 0.00 0.00 0.00 3.27
695 696 4.074970 CCAGTCAATTCAGCAGTAAGGTT 58.925 43.478 0.00 0.00 0.00 3.50
696 697 3.679389 CCAGTCAATTCAGCAGTAAGGT 58.321 45.455 0.00 0.00 0.00 3.50
697 698 2.421424 GCCAGTCAATTCAGCAGTAAGG 59.579 50.000 0.00 0.00 0.00 2.69
698 699 2.094894 CGCCAGTCAATTCAGCAGTAAG 59.905 50.000 0.00 0.00 0.00 2.34
699 700 2.076100 CGCCAGTCAATTCAGCAGTAA 58.924 47.619 0.00 0.00 0.00 2.24
700 701 1.675714 CCGCCAGTCAATTCAGCAGTA 60.676 52.381 0.00 0.00 0.00 2.74
701 702 0.957395 CCGCCAGTCAATTCAGCAGT 60.957 55.000 0.00 0.00 0.00 4.40
702 703 0.957395 ACCGCCAGTCAATTCAGCAG 60.957 55.000 0.00 0.00 0.00 4.24
703 704 0.323302 TACCGCCAGTCAATTCAGCA 59.677 50.000 0.00 0.00 0.00 4.41
704 705 0.727398 GTACCGCCAGTCAATTCAGC 59.273 55.000 0.00 0.00 0.00 4.26
705 706 2.093306 TGTACCGCCAGTCAATTCAG 57.907 50.000 0.00 0.00 0.00 3.02
706 707 2.552599 TTGTACCGCCAGTCAATTCA 57.447 45.000 0.00 0.00 0.00 2.57
707 708 3.907894 TTTTGTACCGCCAGTCAATTC 57.092 42.857 0.00 0.00 0.00 2.17
750 751 1.508632 ACGTGATTTGAACCCGTGAG 58.491 50.000 0.00 0.00 0.00 3.51
850 852 5.046529 AGATCGCTTGCTACTATTTGTCTG 58.953 41.667 0.00 0.00 0.00 3.51
858 860 1.676746 ACGGAGATCGCTTGCTACTA 58.323 50.000 0.00 0.00 43.89 1.82
859 861 1.676746 TACGGAGATCGCTTGCTACT 58.323 50.000 0.00 0.00 43.89 2.57
860 862 2.031069 TGATACGGAGATCGCTTGCTAC 60.031 50.000 0.00 0.00 43.89 3.58
893 895 3.119245 CCATTCTGAATTTGCAGAGGGTG 60.119 47.826 0.00 0.00 44.93 4.61
919 921 1.962100 ACCTCGGATCCGTTTATCTCC 59.038 52.381 32.15 0.00 40.74 3.71
922 929 1.684983 TGGACCTCGGATCCGTTTATC 59.315 52.381 32.15 23.16 39.30 1.75
924 931 1.559368 TTGGACCTCGGATCCGTTTA 58.441 50.000 32.15 13.84 39.30 2.01
928 935 1.595382 GCATTGGACCTCGGATCCG 60.595 63.158 28.62 28.62 39.30 4.18
937 944 4.166011 GCACTCGCGCATTGGACC 62.166 66.667 8.75 0.00 0.00 4.46
938 945 3.121030 AGCACTCGCGCATTGGAC 61.121 61.111 8.75 0.00 45.49 4.02
995 1002 0.675522 ACGGAAGGTAAATGTGGGCG 60.676 55.000 0.00 0.00 0.00 6.13
1112 1120 2.738521 GTGACCGTGATGCGTGCT 60.739 61.111 0.00 0.00 39.32 4.40
1113 1121 4.134187 CGTGACCGTGATGCGTGC 62.134 66.667 0.00 0.00 39.32 5.34
1117 1125 1.490693 CTATGCCGTGACCGTGATGC 61.491 60.000 0.00 0.00 0.00 3.91
1145 1153 3.792053 GAGGCGTCCATGGTAGGCG 62.792 68.421 22.29 17.90 0.00 5.52
1749 1778 1.815421 CTCATTGCCGTCCCTTCCG 60.815 63.158 0.00 0.00 0.00 4.30
1760 1789 2.225467 GGTAGGCCTCATTCTCATTGC 58.775 52.381 9.68 0.00 0.00 3.56
1778 1807 2.685380 CCTCCTCTGCCTTCGGGT 60.685 66.667 0.00 0.00 37.45 5.28
1812 1841 4.349503 ATGCACCGGAGCTTGCCA 62.350 61.111 24.52 4.25 38.00 4.92
1870 1902 2.278271 GTCGTCTCTGCTAGCGGC 60.278 66.667 19.27 4.11 42.22 6.53
1876 1908 1.867919 CGTCCAAGGTCGTCTCTGCT 61.868 60.000 0.00 0.00 0.00 4.24
1896 1928 1.222936 CATGGACAGGCACCTCCTC 59.777 63.158 0.00 0.00 45.52 3.71
2470 2502 8.295288 GCAATCTGAATTTCAAGAAGAAGAAGA 58.705 33.333 0.01 0.00 37.57 2.87
2471 2503 8.080417 TGCAATCTGAATTTCAAGAAGAAGAAG 58.920 33.333 0.01 0.00 37.57 2.85
2472 2504 7.864379 GTGCAATCTGAATTTCAAGAAGAAGAA 59.136 33.333 0.01 0.00 37.57 2.52
2473 2505 7.230108 AGTGCAATCTGAATTTCAAGAAGAAGA 59.770 33.333 0.01 0.00 37.57 2.87
2474 2506 7.368833 AGTGCAATCTGAATTTCAAGAAGAAG 58.631 34.615 0.01 0.00 37.57 2.85
2475 2507 7.281040 AGTGCAATCTGAATTTCAAGAAGAA 57.719 32.000 0.01 0.00 0.00 2.52
2476 2508 6.889301 AGTGCAATCTGAATTTCAAGAAGA 57.111 33.333 0.01 0.00 0.00 2.87
2477 2509 7.941795 AAAGTGCAATCTGAATTTCAAGAAG 57.058 32.000 0.01 0.79 0.00 2.85
2478 2510 7.980662 TCAAAAGTGCAATCTGAATTTCAAGAA 59.019 29.630 0.01 0.00 0.00 2.52
2492 2524 5.931146 TGTGTTCAAACTTCAAAAGTGCAAT 59.069 32.000 0.00 0.00 41.91 3.56
2498 2530 6.194796 TCTCCTGTGTTCAAACTTCAAAAG 57.805 37.500 0.00 0.00 0.00 2.27
2502 2534 5.034852 TGATCTCCTGTGTTCAAACTTCA 57.965 39.130 0.00 0.00 0.00 3.02
2503 2535 5.059833 ACTGATCTCCTGTGTTCAAACTTC 58.940 41.667 0.00 0.00 0.00 3.01
2504 2536 5.041191 ACTGATCTCCTGTGTTCAAACTT 57.959 39.130 0.00 0.00 0.00 2.66
2505 2537 4.696479 ACTGATCTCCTGTGTTCAAACT 57.304 40.909 0.00 0.00 0.00 2.66
2506 2538 4.084328 CGAACTGATCTCCTGTGTTCAAAC 60.084 45.833 0.00 0.00 37.46 2.93
2507 2539 4.058124 CGAACTGATCTCCTGTGTTCAAA 58.942 43.478 0.00 0.00 37.46 2.69
2508 2540 3.069586 ACGAACTGATCTCCTGTGTTCAA 59.930 43.478 0.00 0.00 37.46 2.69
2509 2541 2.628178 ACGAACTGATCTCCTGTGTTCA 59.372 45.455 0.00 0.00 37.46 3.18
2514 2546 4.962155 AGAAAAACGAACTGATCTCCTGT 58.038 39.130 0.00 0.00 0.00 4.00
2518 2550 4.387083 GCGAAGAAAAACGAACTGATCTC 58.613 43.478 0.00 0.00 0.00 2.75
2523 2555 2.287079 GACGCGAAGAAAAACGAACTG 58.713 47.619 15.93 0.00 0.00 3.16
2524 2556 1.071698 CGACGCGAAGAAAAACGAACT 60.072 47.619 15.93 0.00 0.00 3.01
2525 2557 1.293818 CGACGCGAAGAAAAACGAAC 58.706 50.000 15.93 0.00 0.00 3.95
2528 2560 1.071698 AGAACGACGCGAAGAAAAACG 60.072 47.619 15.93 7.56 0.00 3.60
2536 2568 1.126079 GAACTGAAGAACGACGCGAA 58.874 50.000 15.93 0.00 0.00 4.70
2538 2570 1.129326 AAGAACTGAAGAACGACGCG 58.871 50.000 3.53 3.53 0.00 6.01
2540 2572 4.772046 TCAAAAGAACTGAAGAACGACG 57.228 40.909 0.00 0.00 0.00 5.12
2542 2574 7.083875 ACAATTCAAAAGAACTGAAGAACGA 57.916 32.000 0.00 0.00 36.30 3.85
2543 2575 7.484641 TGAACAATTCAAAAGAACTGAAGAACG 59.515 33.333 0.00 0.00 36.30 3.95
2544 2576 8.687824 TGAACAATTCAAAAGAACTGAAGAAC 57.312 30.769 0.00 0.00 36.30 3.01
2550 2582 8.861033 TCAATCTGAACAATTCAAAAGAACTG 57.139 30.769 0.00 0.00 39.58 3.16
2562 2594 8.950210 CCTGTAACTACAATCAATCTGAACAAT 58.050 33.333 0.00 0.00 35.50 2.71
2591 2623 3.641986 GTCCGTCAAACGCCGCAA 61.642 61.111 0.00 0.00 40.91 4.85
2596 2628 0.452122 CCAATTCGTCCGTCAAACGC 60.452 55.000 0.00 0.00 40.91 4.84
2597 2629 0.452122 GCCAATTCGTCCGTCAAACG 60.452 55.000 0.00 0.00 42.11 3.60
2602 2634 3.115892 TGCGCCAATTCGTCCGTC 61.116 61.111 4.18 0.00 0.00 4.79
2608 2649 0.041839 GCTATCTGTGCGCCAATTCG 60.042 55.000 4.18 0.00 0.00 3.34
2615 2656 0.179084 TTACCCTGCTATCTGTGCGC 60.179 55.000 0.00 0.00 0.00 6.09
2630 2671 4.519540 ATCATGCAGGTGTGTTTTTACC 57.480 40.909 0.00 0.00 37.23 2.85
2642 2683 1.542472 TGCAAGTCACAATCATGCAGG 59.458 47.619 0.00 0.00 41.67 4.85
2721 2774 4.385358 TGTTAGCGAGTTATGCAGATCA 57.615 40.909 0.00 0.00 33.85 2.92
2722 2775 4.806247 ACTTGTTAGCGAGTTATGCAGATC 59.194 41.667 0.00 0.00 35.91 2.75
2723 2776 4.759782 ACTTGTTAGCGAGTTATGCAGAT 58.240 39.130 0.00 0.00 35.91 2.90
2725 2778 5.103000 AGTACTTGTTAGCGAGTTATGCAG 58.897 41.667 4.64 0.00 39.85 4.41
2726 2779 5.068234 AGTACTTGTTAGCGAGTTATGCA 57.932 39.130 4.64 0.00 39.85 3.96
2727 2780 8.074972 AGTATAGTACTTGTTAGCGAGTTATGC 58.925 37.037 0.00 2.47 39.85 3.14
2728 2781 9.596677 GAGTATAGTACTTGTTAGCGAGTTATG 57.403 37.037 0.00 0.00 39.59 1.90
2729 2782 9.558396 AGAGTATAGTACTTGTTAGCGAGTTAT 57.442 33.333 0.00 1.31 39.59 1.89
2732 2785 7.984050 TGTAGAGTATAGTACTTGTTAGCGAGT 59.016 37.037 0.00 4.73 39.59 4.18
2733 2786 8.362860 TGTAGAGTATAGTACTTGTTAGCGAG 57.637 38.462 0.00 0.00 39.59 5.03
2734 2787 8.722480 TTGTAGAGTATAGTACTTGTTAGCGA 57.278 34.615 0.00 0.00 39.59 4.93
2756 2809 9.799106 CCATTTCTATTGGGACTATTCTATTGT 57.201 33.333 0.00 0.00 0.00 2.71
2770 2823 5.200483 TCTAAGTTGCCCCATTTCTATTGG 58.800 41.667 0.00 0.00 0.00 3.16
2779 2832 2.846827 AGTAGCTTCTAAGTTGCCCCAT 59.153 45.455 0.00 0.00 0.00 4.00
2805 2858 5.108385 AGTACAACCATGCTTCTTTTTCG 57.892 39.130 0.00 0.00 0.00 3.46
2816 2869 7.905604 TGTATCTTCAGAAAGTACAACCATG 57.094 36.000 0.00 0.00 31.75 3.66
2817 2870 9.520515 AAATGTATCTTCAGAAAGTACAACCAT 57.479 29.630 9.99 0.00 35.07 3.55
2818 2871 8.918202 AAATGTATCTTCAGAAAGTACAACCA 57.082 30.769 9.99 0.00 35.07 3.67
2824 2880 9.793259 ACTGGAAAAATGTATCTTCAGAAAGTA 57.207 29.630 0.00 0.00 33.95 2.24
2841 2897 5.656416 ACCTGACAAATCTGAACTGGAAAAA 59.344 36.000 0.00 0.00 0.00 1.94
2871 2931 4.688021 TCAAAAACAATGGTAACCACAGC 58.312 39.130 0.00 0.00 35.80 4.40
2875 2935 6.481644 GCAAATCTCAAAAACAATGGTAACCA 59.518 34.615 0.00 0.00 38.19 3.67
2876 2936 6.073276 GGCAAATCTCAAAAACAATGGTAACC 60.073 38.462 0.00 0.00 0.00 2.85
2878 2938 6.586344 TGGCAAATCTCAAAAACAATGGTAA 58.414 32.000 0.00 0.00 0.00 2.85
2886 2948 3.996363 GGGACATGGCAAATCTCAAAAAC 59.004 43.478 0.00 0.00 0.00 2.43
2891 2953 2.575735 TGTAGGGACATGGCAAATCTCA 59.424 45.455 0.00 0.00 0.00 3.27
2912 2974 7.155328 AGACACAACGATCAGTTTCTTAATCT 58.845 34.615 0.00 0.00 42.02 2.40
2960 3029 2.978010 CGCCACCAAGGACACCAC 60.978 66.667 0.00 0.00 41.22 4.16
3007 3076 2.334946 ACATCGGCACATGCACCAC 61.335 57.895 6.15 0.00 44.36 4.16
3008 3077 2.033911 ACATCGGCACATGCACCA 59.966 55.556 6.15 0.00 44.36 4.17
3090 3159 2.438434 GGCCAACCGACCATGAGG 60.438 66.667 0.00 0.00 42.21 3.86
3092 3161 1.303236 CAAGGCCAACCGACCATGA 60.303 57.895 5.01 0.00 42.76 3.07
3115 3187 0.837691 AGCTCACCATCACCTCCACA 60.838 55.000 0.00 0.00 0.00 4.17
3116 3188 0.392193 CAGCTCACCATCACCTCCAC 60.392 60.000 0.00 0.00 0.00 4.02
3117 3189 0.837691 ACAGCTCACCATCACCTCCA 60.838 55.000 0.00 0.00 0.00 3.86
3119 3191 1.277557 AGAACAGCTCACCATCACCTC 59.722 52.381 0.00 0.00 0.00 3.85
3120 3192 1.356124 AGAACAGCTCACCATCACCT 58.644 50.000 0.00 0.00 0.00 4.00
3121 3193 2.079925 GAAGAACAGCTCACCATCACC 58.920 52.381 0.00 0.00 0.00 4.02
3122 3194 2.079925 GGAAGAACAGCTCACCATCAC 58.920 52.381 0.00 0.00 0.00 3.06
3123 3195 1.699083 TGGAAGAACAGCTCACCATCA 59.301 47.619 0.00 0.00 31.25 3.07
3124 3196 2.479566 TGGAAGAACAGCTCACCATC 57.520 50.000 0.00 0.00 31.25 3.51
3125 3197 2.508526 GTTGGAAGAACAGCTCACCAT 58.491 47.619 0.00 0.00 34.53 3.55
3126 3198 1.810031 CGTTGGAAGAACAGCTCACCA 60.810 52.381 0.00 0.00 33.31 4.17
3139 3211 0.768622 ACCACCTTGATCCGTTGGAA 59.231 50.000 6.72 0.00 34.34 3.53
3164 3236 4.687215 GCCAGCACGCAGAGTCCA 62.687 66.667 0.00 0.00 0.00 4.02
3165 3237 4.687215 TGCCAGCACGCAGAGTCC 62.687 66.667 0.00 0.00 33.92 3.85
3166 3238 3.418068 GTGCCAGCACGCAGAGTC 61.418 66.667 7.07 0.00 40.05 3.36
3179 3251 1.084370 GTGATACGGAGCACTGTGCC 61.084 60.000 27.74 18.73 46.52 5.01
3219 3292 1.002868 AGCCCAACTACTGCTGCAG 60.003 57.895 27.02 27.02 37.52 4.41
3220 3293 1.003355 GAGCCCAACTACTGCTGCA 60.003 57.895 0.88 0.88 34.99 4.41
3242 3317 8.650835 ATCCAGTGGAAGAAGAAGTGGAACTG 62.651 46.154 17.71 0.00 44.51 3.16
3243 3318 6.699347 ATCCAGTGGAAGAAGAAGTGGAACT 61.699 44.000 17.71 0.00 44.51 3.01
3244 3319 3.142174 CCAGTGGAAGAAGAAGTGGAAC 58.858 50.000 1.68 0.00 36.66 3.62
3245 3320 3.045634 TCCAGTGGAAGAAGAAGTGGAA 58.954 45.455 10.20 0.00 39.84 3.53
3246 3321 2.689658 TCCAGTGGAAGAAGAAGTGGA 58.310 47.619 10.20 0.00 40.37 4.02
3247 3322 3.341823 CATCCAGTGGAAGAAGAAGTGG 58.658 50.000 17.71 0.00 34.34 4.00
3248 3323 2.746362 GCATCCAGTGGAAGAAGAAGTG 59.254 50.000 17.71 8.38 34.34 3.16
3249 3324 2.641815 AGCATCCAGTGGAAGAAGAAGT 59.358 45.455 17.71 0.00 34.34 3.01
3250 3325 3.008330 CAGCATCCAGTGGAAGAAGAAG 58.992 50.000 17.71 1.75 34.34 2.85
3251 3326 2.373169 ACAGCATCCAGTGGAAGAAGAA 59.627 45.455 17.71 0.00 34.34 2.52
3252 3327 1.980765 ACAGCATCCAGTGGAAGAAGA 59.019 47.619 17.71 0.00 34.34 2.87
3294 3369 7.262772 TGAGACTGTAATATTTGGTTAGACGG 58.737 38.462 0.00 0.00 0.00 4.79
3295 3370 8.592998 GTTGAGACTGTAATATTTGGTTAGACG 58.407 37.037 0.00 0.00 0.00 4.18
3296 3371 8.592998 CGTTGAGACTGTAATATTTGGTTAGAC 58.407 37.037 0.00 0.00 0.00 2.59
3297 3372 8.525316 TCGTTGAGACTGTAATATTTGGTTAGA 58.475 33.333 0.00 0.00 0.00 2.10
3298 3373 8.697846 TCGTTGAGACTGTAATATTTGGTTAG 57.302 34.615 0.00 0.00 0.00 2.34
3299 3374 9.309516 GATCGTTGAGACTGTAATATTTGGTTA 57.690 33.333 0.00 0.00 0.00 2.85
3300 3375 7.822334 TGATCGTTGAGACTGTAATATTTGGTT 59.178 33.333 0.00 0.00 0.00 3.67
3301 3376 7.327975 TGATCGTTGAGACTGTAATATTTGGT 58.672 34.615 0.00 0.00 0.00 3.67
3302 3377 7.770801 TGATCGTTGAGACTGTAATATTTGG 57.229 36.000 0.00 0.00 0.00 3.28
3303 3378 7.795734 GCATGATCGTTGAGACTGTAATATTTG 59.204 37.037 0.00 0.00 0.00 2.32
3304 3379 7.495606 TGCATGATCGTTGAGACTGTAATATTT 59.504 33.333 0.00 0.00 0.00 1.40
3305 3380 6.986231 TGCATGATCGTTGAGACTGTAATATT 59.014 34.615 0.00 0.00 0.00 1.28
3306 3381 6.515832 TGCATGATCGTTGAGACTGTAATAT 58.484 36.000 0.00 0.00 0.00 1.28
3307 3382 5.901552 TGCATGATCGTTGAGACTGTAATA 58.098 37.500 0.00 0.00 0.00 0.98
3308 3383 4.758688 TGCATGATCGTTGAGACTGTAAT 58.241 39.130 0.00 0.00 0.00 1.89
3309 3384 4.176271 CTGCATGATCGTTGAGACTGTAA 58.824 43.478 0.00 0.00 0.00 2.41
3310 3385 3.193479 ACTGCATGATCGTTGAGACTGTA 59.807 43.478 0.00 0.00 0.00 2.74
3311 3386 2.028658 ACTGCATGATCGTTGAGACTGT 60.029 45.455 0.00 0.00 0.00 3.55
3312 3387 2.347755 CACTGCATGATCGTTGAGACTG 59.652 50.000 0.00 0.00 0.00 3.51
3313 3388 2.028658 ACACTGCATGATCGTTGAGACT 60.029 45.455 0.00 0.00 0.00 3.24
3314 3389 2.093310 CACACTGCATGATCGTTGAGAC 59.907 50.000 0.00 0.00 0.00 3.36
3315 3390 2.340337 CACACTGCATGATCGTTGAGA 58.660 47.619 0.00 0.00 0.00 3.27
3316 3391 1.395954 CCACACTGCATGATCGTTGAG 59.604 52.381 0.00 0.00 0.00 3.02
3317 3392 1.270785 ACCACACTGCATGATCGTTGA 60.271 47.619 0.00 0.00 0.00 3.18
3318 3393 1.135888 CACCACACTGCATGATCGTTG 60.136 52.381 0.00 0.00 0.00 4.10
3319 3394 1.159285 CACCACACTGCATGATCGTT 58.841 50.000 0.00 0.00 0.00 3.85
3320 3395 0.035317 ACACCACACTGCATGATCGT 59.965 50.000 0.00 0.00 0.00 3.73
3321 3396 2.008752 TACACCACACTGCATGATCG 57.991 50.000 0.00 0.00 0.00 3.69
3322 3397 4.697514 ACTATACACCACACTGCATGATC 58.302 43.478 0.00 0.00 0.00 2.92
3323 3398 4.760530 ACTATACACCACACTGCATGAT 57.239 40.909 0.00 0.00 0.00 2.45
3324 3399 4.142026 GGTACTATACACCACACTGCATGA 60.142 45.833 0.00 0.00 36.01 3.07
3325 3400 4.119862 GGTACTATACACCACACTGCATG 58.880 47.826 0.00 0.00 36.01 4.06
3326 3401 3.772572 TGGTACTATACACCACACTGCAT 59.227 43.478 0.00 0.00 41.17 3.96
3327 3402 3.166679 TGGTACTATACACCACACTGCA 58.833 45.455 0.00 0.00 41.17 4.41
3328 3403 3.880047 TGGTACTATACACCACACTGC 57.120 47.619 0.00 0.00 41.17 4.40
3335 3410 8.015185 TGAAAGGTTAGATGGTACTATACACC 57.985 38.462 0.00 0.00 36.54 4.16
3336 3411 9.880157 TTTGAAAGGTTAGATGGTACTATACAC 57.120 33.333 0.00 0.00 0.00 2.90
3340 3415 9.449719 CTGTTTTGAAAGGTTAGATGGTACTAT 57.550 33.333 0.00 0.00 0.00 2.12
3341 3416 8.434392 ACTGTTTTGAAAGGTTAGATGGTACTA 58.566 33.333 0.00 0.00 0.00 1.82
3342 3417 7.287810 ACTGTTTTGAAAGGTTAGATGGTACT 58.712 34.615 0.00 0.00 0.00 2.73
3343 3418 7.444487 AGACTGTTTTGAAAGGTTAGATGGTAC 59.556 37.037 0.00 0.00 0.00 3.34
3344 3419 7.514721 AGACTGTTTTGAAAGGTTAGATGGTA 58.485 34.615 0.00 0.00 0.00 3.25
3345 3420 6.365520 AGACTGTTTTGAAAGGTTAGATGGT 58.634 36.000 0.00 0.00 0.00 3.55
3346 3421 6.884280 AGACTGTTTTGAAAGGTTAGATGG 57.116 37.500 0.00 0.00 0.00 3.51
3347 3422 9.273016 TCTTAGACTGTTTTGAAAGGTTAGATG 57.727 33.333 0.00 0.00 0.00 2.90
3348 3423 9.495572 CTCTTAGACTGTTTTGAAAGGTTAGAT 57.504 33.333 0.00 0.00 0.00 1.98
3349 3424 8.701895 TCTCTTAGACTGTTTTGAAAGGTTAGA 58.298 33.333 0.00 0.00 0.00 2.10
3350 3425 8.888579 TCTCTTAGACTGTTTTGAAAGGTTAG 57.111 34.615 0.00 0.00 0.00 2.34
3351 3426 9.675464 TTTCTCTTAGACTGTTTTGAAAGGTTA 57.325 29.630 0.00 0.00 0.00 2.85
3352 3427 8.459635 GTTTCTCTTAGACTGTTTTGAAAGGTT 58.540 33.333 0.00 0.00 0.00 3.50
3353 3428 7.829706 AGTTTCTCTTAGACTGTTTTGAAAGGT 59.170 33.333 0.00 0.00 0.00 3.50
3354 3429 8.214721 AGTTTCTCTTAGACTGTTTTGAAAGG 57.785 34.615 0.00 0.00 0.00 3.11
3355 3430 8.338986 GGAGTTTCTCTTAGACTGTTTTGAAAG 58.661 37.037 0.00 0.00 0.00 2.62
3356 3431 7.827236 TGGAGTTTCTCTTAGACTGTTTTGAAA 59.173 33.333 0.00 0.00 0.00 2.69
3357 3432 7.335627 TGGAGTTTCTCTTAGACTGTTTTGAA 58.664 34.615 0.00 0.00 0.00 2.69
3358 3433 6.884832 TGGAGTTTCTCTTAGACTGTTTTGA 58.115 36.000 0.00 0.00 0.00 2.69
3359 3434 7.065803 TGTTGGAGTTTCTCTTAGACTGTTTTG 59.934 37.037 0.00 0.00 0.00 2.44
3360 3435 7.110155 TGTTGGAGTTTCTCTTAGACTGTTTT 58.890 34.615 0.00 0.00 0.00 2.43
3361 3436 6.650120 TGTTGGAGTTTCTCTTAGACTGTTT 58.350 36.000 0.00 0.00 0.00 2.83
3362 3437 6.235231 TGTTGGAGTTTCTCTTAGACTGTT 57.765 37.500 0.00 0.00 0.00 3.16
3363 3438 5.740513 GCTGTTGGAGTTTCTCTTAGACTGT 60.741 44.000 0.00 0.00 0.00 3.55
3364 3439 4.688413 GCTGTTGGAGTTTCTCTTAGACTG 59.312 45.833 0.00 0.00 0.00 3.51
3365 3440 4.591072 AGCTGTTGGAGTTTCTCTTAGACT 59.409 41.667 0.00 0.00 0.00 3.24
3366 3441 4.888917 AGCTGTTGGAGTTTCTCTTAGAC 58.111 43.478 0.00 0.00 0.00 2.59
3367 3442 4.021016 GGAGCTGTTGGAGTTTCTCTTAGA 60.021 45.833 0.00 0.00 0.00 2.10
3368 3443 4.249661 GGAGCTGTTGGAGTTTCTCTTAG 58.750 47.826 0.00 0.00 0.00 2.18
3369 3444 3.008049 GGGAGCTGTTGGAGTTTCTCTTA 59.992 47.826 0.00 0.00 0.00 2.10
3370 3445 2.224646 GGGAGCTGTTGGAGTTTCTCTT 60.225 50.000 0.00 0.00 0.00 2.85
3371 3446 1.349357 GGGAGCTGTTGGAGTTTCTCT 59.651 52.381 0.00 0.00 0.00 3.10
3372 3447 1.349357 AGGGAGCTGTTGGAGTTTCTC 59.651 52.381 0.00 0.00 0.00 2.87
3373 3448 1.439543 AGGGAGCTGTTGGAGTTTCT 58.560 50.000 0.00 0.00 0.00 2.52
3374 3449 1.882623 CAAGGGAGCTGTTGGAGTTTC 59.117 52.381 0.00 0.00 0.00 2.78
3375 3450 1.494721 TCAAGGGAGCTGTTGGAGTTT 59.505 47.619 0.00 0.00 0.00 2.66
3376 3451 1.140312 TCAAGGGAGCTGTTGGAGTT 58.860 50.000 0.00 0.00 0.00 3.01
3377 3452 1.140312 TTCAAGGGAGCTGTTGGAGT 58.860 50.000 0.00 0.00 0.00 3.85
3378 3453 2.276732 TTTCAAGGGAGCTGTTGGAG 57.723 50.000 0.00 0.00 0.00 3.86
3379 3454 2.693074 GTTTTTCAAGGGAGCTGTTGGA 59.307 45.455 0.00 0.00 0.00 3.53
3380 3455 2.695147 AGTTTTTCAAGGGAGCTGTTGG 59.305 45.455 0.00 0.00 0.00 3.77
3381 3456 4.363138 GAAGTTTTTCAAGGGAGCTGTTG 58.637 43.478 0.00 0.00 33.38 3.33
3382 3457 3.384789 GGAAGTTTTTCAAGGGAGCTGTT 59.615 43.478 0.00 0.00 34.90 3.16
3383 3458 2.959030 GGAAGTTTTTCAAGGGAGCTGT 59.041 45.455 0.00 0.00 34.90 4.40
3384 3459 2.297315 GGGAAGTTTTTCAAGGGAGCTG 59.703 50.000 0.00 0.00 34.90 4.24
3385 3460 2.598565 GGGAAGTTTTTCAAGGGAGCT 58.401 47.619 0.00 0.00 34.90 4.09
3386 3461 1.269723 CGGGAAGTTTTTCAAGGGAGC 59.730 52.381 0.00 0.00 34.90 4.70
3387 3462 2.583143 ACGGGAAGTTTTTCAAGGGAG 58.417 47.619 0.00 0.00 34.90 4.30
3388 3463 2.740506 ACGGGAAGTTTTTCAAGGGA 57.259 45.000 0.00 0.00 34.90 4.20
3389 3464 4.922471 TTTACGGGAAGTTTTTCAAGGG 57.078 40.909 0.00 0.00 34.90 3.95
3390 3465 5.746721 CAGTTTTACGGGAAGTTTTTCAAGG 59.253 40.000 0.00 0.00 34.90 3.61
3391 3466 6.557110 TCAGTTTTACGGGAAGTTTTTCAAG 58.443 36.000 0.00 0.00 34.90 3.02
3392 3467 6.512342 TCAGTTTTACGGGAAGTTTTTCAA 57.488 33.333 0.00 0.00 34.90 2.69
3393 3468 6.702716 ATCAGTTTTACGGGAAGTTTTTCA 57.297 33.333 0.00 0.00 34.90 2.69
3394 3469 7.997107 AAATCAGTTTTACGGGAAGTTTTTC 57.003 32.000 0.00 0.00 0.00 2.29
3396 3471 9.471084 CATAAAATCAGTTTTACGGGAAGTTTT 57.529 29.630 0.00 0.00 41.25 2.43
3397 3472 8.635328 ACATAAAATCAGTTTTACGGGAAGTTT 58.365 29.630 0.00 0.00 41.25 2.66
3398 3473 8.173542 ACATAAAATCAGTTTTACGGGAAGTT 57.826 30.769 0.00 0.00 41.25 2.66
3399 3474 7.754851 ACATAAAATCAGTTTTACGGGAAGT 57.245 32.000 0.00 0.00 41.25 3.01
3432 3507 8.727910 ACTTTCTCTAAATTTTACGGTCATTCC 58.272 33.333 0.00 0.00 0.00 3.01
3434 3509 9.893305 CAACTTTCTCTAAATTTTACGGTCATT 57.107 29.630 0.00 0.00 0.00 2.57
3435 3510 9.063615 ACAACTTTCTCTAAATTTTACGGTCAT 57.936 29.630 0.00 0.00 0.00 3.06
3436 3511 8.441312 ACAACTTTCTCTAAATTTTACGGTCA 57.559 30.769 0.00 0.00 0.00 4.02
3437 3512 7.739043 CGACAACTTTCTCTAAATTTTACGGTC 59.261 37.037 0.00 0.00 0.00 4.79
3438 3513 7.439056 TCGACAACTTTCTCTAAATTTTACGGT 59.561 33.333 0.00 0.00 0.00 4.83
3439 3514 7.790000 TCGACAACTTTCTCTAAATTTTACGG 58.210 34.615 0.00 0.00 0.00 4.02
3440 3515 9.640974 TTTCGACAACTTTCTCTAAATTTTACG 57.359 29.630 0.00 0.00 0.00 3.18
3442 3517 9.659830 GCTTTCGACAACTTTCTCTAAATTTTA 57.340 29.630 0.00 0.00 0.00 1.52
3443 3518 8.406297 AGCTTTCGACAACTTTCTCTAAATTTT 58.594 29.630 0.00 0.00 0.00 1.82
3444 3519 7.931275 AGCTTTCGACAACTTTCTCTAAATTT 58.069 30.769 0.00 0.00 0.00 1.82
3445 3520 7.497925 AGCTTTCGACAACTTTCTCTAAATT 57.502 32.000 0.00 0.00 0.00 1.82
3446 3521 7.873505 AGTAGCTTTCGACAACTTTCTCTAAAT 59.126 33.333 0.00 0.00 0.00 1.40
3447 3522 7.208080 AGTAGCTTTCGACAACTTTCTCTAAA 58.792 34.615 0.00 0.00 0.00 1.85
3448 3523 6.746120 AGTAGCTTTCGACAACTTTCTCTAA 58.254 36.000 0.00 0.00 0.00 2.10
3449 3524 6.328641 AGTAGCTTTCGACAACTTTCTCTA 57.671 37.500 0.00 0.00 0.00 2.43
3450 3525 5.203060 AGTAGCTTTCGACAACTTTCTCT 57.797 39.130 0.00 0.00 0.00 3.10
3451 3526 5.908916 AAGTAGCTTTCGACAACTTTCTC 57.091 39.130 0.00 0.00 0.00 2.87
3452 3527 6.679327 AAAAGTAGCTTTCGACAACTTTCT 57.321 33.333 8.55 0.00 38.95 2.52
3453 3528 8.280497 TGATAAAAGTAGCTTTCGACAACTTTC 58.720 33.333 8.55 0.00 38.95 2.62
3454 3529 8.149973 TGATAAAAGTAGCTTTCGACAACTTT 57.850 30.769 0.00 0.00 40.98 2.66
3455 3530 7.724305 TGATAAAAGTAGCTTTCGACAACTT 57.276 32.000 0.00 0.00 31.99 2.66
3456 3531 7.724305 TTGATAAAAGTAGCTTTCGACAACT 57.276 32.000 0.00 0.00 31.99 3.16
3457 3532 8.950403 AATTGATAAAAGTAGCTTTCGACAAC 57.050 30.769 0.00 0.00 31.99 3.32
3458 3533 8.234546 GGAATTGATAAAAGTAGCTTTCGACAA 58.765 33.333 0.00 0.00 31.99 3.18
3459 3534 7.389330 TGGAATTGATAAAAGTAGCTTTCGACA 59.611 33.333 0.00 0.00 31.99 4.35
3460 3535 7.748847 TGGAATTGATAAAAGTAGCTTTCGAC 58.251 34.615 0.00 0.00 31.99 4.20
3461 3536 7.606456 ACTGGAATTGATAAAAGTAGCTTTCGA 59.394 33.333 0.00 0.00 31.99 3.71
3462 3537 7.752695 ACTGGAATTGATAAAAGTAGCTTTCG 58.247 34.615 0.00 0.00 31.99 3.46
3466 3541 9.740710 AGTTTACTGGAATTGATAAAAGTAGCT 57.259 29.630 0.00 0.00 0.00 3.32
3519 3594 6.071320 GGGTCCTAAGCCATCATCTATTTTT 58.929 40.000 0.00 0.00 42.92 1.94
3520 3595 5.635120 GGGTCCTAAGCCATCATCTATTTT 58.365 41.667 0.00 0.00 42.92 1.82
3521 3596 4.263068 CGGGTCCTAAGCCATCATCTATTT 60.263 45.833 0.00 0.00 43.63 1.40
3522 3597 3.261897 CGGGTCCTAAGCCATCATCTATT 59.738 47.826 0.00 0.00 43.63 1.73
3523 3598 2.834549 CGGGTCCTAAGCCATCATCTAT 59.165 50.000 0.00 0.00 43.63 1.98
3524 3599 2.248248 CGGGTCCTAAGCCATCATCTA 58.752 52.381 0.00 0.00 43.63 1.98
3525 3600 1.051812 CGGGTCCTAAGCCATCATCT 58.948 55.000 0.00 0.00 43.63 2.90
3526 3601 0.603975 GCGGGTCCTAAGCCATCATC 60.604 60.000 0.00 0.00 43.63 2.92
3527 3602 1.451936 GCGGGTCCTAAGCCATCAT 59.548 57.895 0.00 0.00 43.63 2.45
3528 3603 2.908015 GCGGGTCCTAAGCCATCA 59.092 61.111 0.00 0.00 43.63 3.07
3533 3608 2.187163 GACTGGCGGGTCCTAAGC 59.813 66.667 0.00 0.00 35.26 3.09
3534 3609 1.258445 ACTGACTGGCGGGTCCTAAG 61.258 60.000 0.00 0.00 35.54 2.18
3535 3610 0.040058 TACTGACTGGCGGGTCCTAA 59.960 55.000 0.00 0.00 35.54 2.69
3536 3611 0.395311 CTACTGACTGGCGGGTCCTA 60.395 60.000 0.00 0.00 35.54 2.94
3537 3612 1.682684 CTACTGACTGGCGGGTCCT 60.683 63.158 0.00 0.00 35.54 3.85
3538 3613 2.893398 CTACTGACTGGCGGGTCC 59.107 66.667 0.00 0.00 35.54 4.46
3539 3614 2.184579 GCTACTGACTGGCGGGTC 59.815 66.667 0.00 0.52 36.81 4.46
3540 3615 2.603473 TGCTACTGACTGGCGGGT 60.603 61.111 0.00 0.00 0.00 5.28
3541 3616 2.125512 GTGCTACTGACTGGCGGG 60.126 66.667 0.00 0.00 0.00 6.13
3542 3617 2.507102 CGTGCTACTGACTGGCGG 60.507 66.667 0.00 0.00 0.00 6.13
3543 3618 2.088763 CACGTGCTACTGACTGGCG 61.089 63.158 0.82 0.00 0.00 5.69
3544 3619 1.006102 ACACGTGCTACTGACTGGC 60.006 57.895 17.22 0.00 0.00 4.85
3545 3620 0.313987 TCACACGTGCTACTGACTGG 59.686 55.000 17.22 0.00 0.00 4.00
3546 3621 1.409412 GTCACACGTGCTACTGACTG 58.591 55.000 22.72 10.15 31.99 3.51
3547 3622 0.040336 CGTCACACGTGCTACTGACT 60.040 55.000 25.36 0.96 36.74 3.41
3548 3623 1.002250 CCGTCACACGTGCTACTGAC 61.002 60.000 21.02 21.02 40.58 3.51
3549 3624 1.284715 CCGTCACACGTGCTACTGA 59.715 57.895 17.22 9.11 40.58 3.41
3550 3625 2.372690 GCCGTCACACGTGCTACTG 61.373 63.158 17.22 11.34 40.58 2.74
3551 3626 2.049433 GCCGTCACACGTGCTACT 60.049 61.111 17.22 0.00 40.58 2.57
3552 3627 3.110178 GGCCGTCACACGTGCTAC 61.110 66.667 17.22 13.01 40.58 3.58
3553 3628 4.710695 CGGCCGTCACACGTGCTA 62.711 66.667 19.50 0.00 40.58 3.49
3597 3672 4.767255 CTCACTGGCGGCTGTCCC 62.767 72.222 18.65 0.00 0.00 4.46
3598 3673 4.767255 CCTCACTGGCGGCTGTCC 62.767 72.222 18.65 0.00 0.00 4.02
3599 3674 4.767255 CCCTCACTGGCGGCTGTC 62.767 72.222 18.65 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.