Multiple sequence alignment - TraesCS7A01G151200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G151200 chr7A 100.000 5189 0 0 1 5189 105243322 105248510 0.000000e+00 9583.0
1 TraesCS7A01G151200 chr7A 95.935 2017 77 3 1993 4006 24633932 24631918 0.000000e+00 3265.0
2 TraesCS7A01G151200 chr7A 91.803 183 15 0 1192 1374 105244468 105244650 6.670000e-64 255.0
3 TraesCS7A01G151200 chr7A 91.803 183 15 0 1147 1329 105244513 105244695 6.670000e-64 255.0
4 TraesCS7A01G151200 chr7A 87.586 145 17 1 1231 1374 105244461 105244605 3.210000e-37 167.0
5 TraesCS7A01G151200 chr7A 87.586 145 17 1 1140 1284 105244552 105244695 3.210000e-37 167.0
6 TraesCS7A01G151200 chr1A 98.510 2013 29 1 1995 4006 40145097 40143085 0.000000e+00 3550.0
7 TraesCS7A01G151200 chr1A 97.716 2014 43 3 1993 4006 592127010 592125000 0.000000e+00 3461.0
8 TraesCS7A01G151200 chr3A 95.996 1998 74 5 2012 4006 7969496 7967502 0.000000e+00 3241.0
9 TraesCS7A01G151200 chr3A 95.644 2020 81 6 1992 4006 689506831 689508848 0.000000e+00 3236.0
10 TraesCS7A01G151200 chr3A 89.166 803 30 22 4387 5189 54458601 54457856 0.000000e+00 948.0
11 TraesCS7A01G151200 chr3A 90.476 84 7 1 4627 4710 731846184 731846266 5.490000e-20 110.0
12 TraesCS7A01G151200 chr3D 93.020 2020 112 23 2000 4006 16548914 16546911 0.000000e+00 2922.0
13 TraesCS7A01G151200 chr3D 97.143 35 1 0 2 36 556932706 556932740 5.610000e-05 60.2
14 TraesCS7A01G151200 chr2A 95.998 1774 61 9 2235 4006 705544066 705545831 0.000000e+00 2874.0
15 TraesCS7A01G151200 chr2A 93.023 43 1 2 4388 4430 400972766 400972806 1.560000e-05 62.1
16 TraesCS7A01G151200 chr1D 92.247 2038 118 28 1982 4006 180128992 180131002 0.000000e+00 2852.0
17 TraesCS7A01G151200 chr1D 94.595 37 0 2 2 38 260985785 260985819 7.260000e-04 56.5
18 TraesCS7A01G151200 chr6D 90.918 2015 139 28 2008 4006 121363412 121361426 0.000000e+00 2667.0
19 TraesCS7A01G151200 chr6D 91.379 116 10 0 4391 4506 199142199 199142084 5.380000e-35 159.0
20 TraesCS7A01G151200 chr7D 87.413 1573 113 33 324 1857 101556935 101558461 0.000000e+00 1729.0
21 TraesCS7A01G151200 chr7D 86.866 335 25 12 4063 4384 101558816 101559144 1.780000e-94 357.0
22 TraesCS7A01G151200 chr7D 91.597 119 10 0 1260 1378 101557797 101557915 1.160000e-36 165.0
23 TraesCS7A01G151200 chr1B 99.005 804 8 0 4386 5189 18383413 18382610 0.000000e+00 1441.0
24 TraesCS7A01G151200 chr1B 94.340 53 2 1 4626 4677 517482832 517482884 4.310000e-11 80.5
25 TraesCS7A01G151200 chr1B 97.059 34 1 0 2 35 184497736 184497769 2.020000e-04 58.4
26 TraesCS7A01G151200 chr7B 89.557 1015 76 15 324 1329 58716061 58717054 0.000000e+00 1260.0
27 TraesCS7A01G151200 chr7B 91.602 774 51 12 1214 1984 58716894 58717656 0.000000e+00 1057.0
28 TraesCS7A01G151200 chr7B 90.244 328 23 7 4013 4336 58717777 58718099 2.230000e-113 420.0
29 TraesCS7A01G151200 chr7B 87.838 148 17 1 1231 1377 58716865 58717012 6.910000e-39 172.0
30 TraesCS7A01G151200 chr6A 84.848 1023 76 35 356 1329 74109124 74108132 0.000000e+00 957.0
31 TraesCS7A01G151200 chr6A 90.172 641 54 6 1201 1838 74108305 74107671 0.000000e+00 826.0
32 TraesCS7A01G151200 chr6A 85.161 465 40 4 4391 4850 255327812 255328252 2.850000e-122 449.0
33 TraesCS7A01G151200 chr6A 92.042 289 20 2 4895 5183 255328252 255328537 2.250000e-108 403.0
34 TraesCS7A01G151200 chr6A 87.087 333 25 11 4063 4384 74106945 74106620 1.370000e-95 361.0
35 TraesCS7A01G151200 chr6A 92.188 64 5 0 4627 4690 255327966 255328029 1.990000e-14 91.6
36 TraesCS7A01G151200 chr2B 89.152 802 30 22 4388 5189 756350772 756350028 0.000000e+00 946.0
37 TraesCS7A01G151200 chr2B 97.059 34 0 1 238 270 210010360 210010327 7.260000e-04 56.5
38 TraesCS7A01G151200 chr2B 94.595 37 0 2 1 37 224230107 224230073 7.260000e-04 56.5
39 TraesCS7A01G151200 chr2B 100.000 28 0 0 2 29 456054060 456054087 9.000000e-03 52.8
40 TraesCS7A01G151200 chr2B 94.286 35 0 2 233 267 551040394 551040426 9.000000e-03 52.8
41 TraesCS7A01G151200 chr3B 91.667 84 6 1 4627 4710 809511644 809511726 1.180000e-21 115.0
42 TraesCS7A01G151200 chr3B 100.000 33 0 0 1 33 92567408 92567376 1.560000e-05 62.1
43 TraesCS7A01G151200 chr3B 100.000 30 0 0 239 268 31060693 31060722 7.260000e-04 56.5
44 TraesCS7A01G151200 chr4D 93.478 46 3 0 4627 4672 3394611 3394566 9.320000e-08 69.4
45 TraesCS7A01G151200 chr4A 100.000 32 0 0 1 32 57855824 57855793 5.610000e-05 60.2
46 TraesCS7A01G151200 chr2D 94.595 37 2 0 1 37 131419767 131419731 2.020000e-04 58.4
47 TraesCS7A01G151200 chr5B 92.308 39 3 0 1 39 381369432 381369470 7.260000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G151200 chr7A 105243322 105248510 5188 False 9583.000000 9583 100.000000 1 5189 1 chr7A.!!$F1 5188
1 TraesCS7A01G151200 chr7A 24631918 24633932 2014 True 3265.000000 3265 95.935000 1993 4006 1 chr7A.!!$R1 2013
2 TraesCS7A01G151200 chr1A 40143085 40145097 2012 True 3550.000000 3550 98.510000 1995 4006 1 chr1A.!!$R1 2011
3 TraesCS7A01G151200 chr1A 592125000 592127010 2010 True 3461.000000 3461 97.716000 1993 4006 1 chr1A.!!$R2 2013
4 TraesCS7A01G151200 chr3A 7967502 7969496 1994 True 3241.000000 3241 95.996000 2012 4006 1 chr3A.!!$R1 1994
5 TraesCS7A01G151200 chr3A 689506831 689508848 2017 False 3236.000000 3236 95.644000 1992 4006 1 chr3A.!!$F1 2014
6 TraesCS7A01G151200 chr3A 54457856 54458601 745 True 948.000000 948 89.166000 4387 5189 1 chr3A.!!$R2 802
7 TraesCS7A01G151200 chr3D 16546911 16548914 2003 True 2922.000000 2922 93.020000 2000 4006 1 chr3D.!!$R1 2006
8 TraesCS7A01G151200 chr2A 705544066 705545831 1765 False 2874.000000 2874 95.998000 2235 4006 1 chr2A.!!$F2 1771
9 TraesCS7A01G151200 chr1D 180128992 180131002 2010 False 2852.000000 2852 92.247000 1982 4006 1 chr1D.!!$F1 2024
10 TraesCS7A01G151200 chr6D 121361426 121363412 1986 True 2667.000000 2667 90.918000 2008 4006 1 chr6D.!!$R1 1998
11 TraesCS7A01G151200 chr7D 101556935 101559144 2209 False 750.333333 1729 88.625333 324 4384 3 chr7D.!!$F1 4060
12 TraesCS7A01G151200 chr1B 18382610 18383413 803 True 1441.000000 1441 99.005000 4386 5189 1 chr1B.!!$R1 803
13 TraesCS7A01G151200 chr7B 58716061 58718099 2038 False 727.250000 1260 89.810250 324 4336 4 chr7B.!!$F1 4012
14 TraesCS7A01G151200 chr6A 74106620 74109124 2504 True 714.666667 957 87.369000 356 4384 3 chr6A.!!$R1 4028
15 TraesCS7A01G151200 chr6A 255327812 255328537 725 False 314.533333 449 89.797000 4391 5183 3 chr6A.!!$F1 792
16 TraesCS7A01G151200 chr2B 756350028 756350772 744 True 946.000000 946 89.152000 4388 5189 1 chr2B.!!$R3 801


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
181 182 0.031721 GGGAATAGTAGTGCGACCCG 59.968 60.0 0.00 0.0 0.00 5.28 F
203 204 0.032540 CAGCAAAGCTTCGGCCTTTT 59.967 50.0 16.78 0.0 43.01 2.27 F
850 898 0.108138 CCAAACTCCTACTCGCTGGG 60.108 60.0 0.00 0.0 0.00 4.45 F
1812 1886 0.453793 CCTCGCTCTACACCACAGAG 59.546 60.0 0.00 0.0 42.09 3.35 F
3715 4332 0.391597 TGCCTCGTTCGAAACTCCTT 59.608 50.0 0.00 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1943 2524 1.077930 ATCAACGCATGCCAGCTCT 60.078 52.632 13.15 0.0 0.00 4.09 R
2161 2747 1.220206 CCCGCTCTCTGCAACTGAT 59.780 57.895 0.00 0.0 43.06 2.90 R
2314 2906 6.003326 TGATTGCCTATTCAACAGAGTTTGA 58.997 36.000 0.00 0.0 33.55 2.69 R
3863 4486 2.728690 ATTCCAACGTACGTGCTGTA 57.271 45.000 23.57 8.0 0.00 2.74 R
4525 5161 6.653989 ACTTCCTTTTAGTCCATCATGGTAG 58.346 40.000 2.79 0.0 39.03 3.18 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.599036 GGTACCCATTGCCATCCC 57.401 61.111 0.00 0.00 0.00 3.85
27 28 1.930520 GGTACCCATTGCCATCCCT 59.069 57.895 0.00 0.00 0.00 4.20
28 29 1.145571 GGTACCCATTGCCATCCCTA 58.854 55.000 0.00 0.00 0.00 3.53
29 30 1.497286 GGTACCCATTGCCATCCCTAA 59.503 52.381 0.00 0.00 0.00 2.69
30 31 2.489073 GGTACCCATTGCCATCCCTAAG 60.489 54.545 0.00 0.00 0.00 2.18
31 32 1.607225 ACCCATTGCCATCCCTAAGA 58.393 50.000 0.00 0.00 0.00 2.10
32 33 1.929494 ACCCATTGCCATCCCTAAGAA 59.071 47.619 0.00 0.00 0.00 2.52
33 34 2.519691 ACCCATTGCCATCCCTAAGAAT 59.480 45.455 0.00 0.00 0.00 2.40
34 35 2.895404 CCCATTGCCATCCCTAAGAATG 59.105 50.000 0.00 0.00 0.00 2.67
35 36 3.436906 CCCATTGCCATCCCTAAGAATGA 60.437 47.826 0.00 0.00 0.00 2.57
36 37 3.825014 CCATTGCCATCCCTAAGAATGAG 59.175 47.826 0.00 0.00 0.00 2.90
37 38 3.582998 TTGCCATCCCTAAGAATGAGG 57.417 47.619 0.00 0.00 35.98 3.86
38 39 1.143684 TGCCATCCCTAAGAATGAGGC 59.856 52.381 0.00 0.00 34.22 4.70
39 40 1.879796 GCCATCCCTAAGAATGAGGCG 60.880 57.143 0.00 0.00 34.22 5.52
40 41 1.694150 CCATCCCTAAGAATGAGGCGA 59.306 52.381 0.00 0.00 34.22 5.54
41 42 2.548920 CCATCCCTAAGAATGAGGCGAC 60.549 54.545 0.00 0.00 34.22 5.19
43 44 2.467880 TCCCTAAGAATGAGGCGACTT 58.532 47.619 0.00 0.00 44.43 3.01
44 45 2.168521 TCCCTAAGAATGAGGCGACTTG 59.831 50.000 0.00 0.00 44.43 3.16
45 46 2.555199 CCTAAGAATGAGGCGACTTGG 58.445 52.381 0.00 0.00 44.43 3.61
46 47 2.168521 CCTAAGAATGAGGCGACTTGGA 59.831 50.000 0.00 0.00 44.43 3.53
47 48 2.859165 AAGAATGAGGCGACTTGGAA 57.141 45.000 0.00 0.00 44.43 3.53
48 49 3.356529 AAGAATGAGGCGACTTGGAAT 57.643 42.857 0.00 0.00 44.43 3.01
49 50 2.636830 AGAATGAGGCGACTTGGAATG 58.363 47.619 0.00 0.00 44.43 2.67
50 51 1.672881 GAATGAGGCGACTTGGAATGG 59.327 52.381 0.00 0.00 44.43 3.16
51 52 0.911769 ATGAGGCGACTTGGAATGGA 59.088 50.000 0.00 0.00 44.43 3.41
52 53 0.036388 TGAGGCGACTTGGAATGGAC 60.036 55.000 0.00 0.00 44.43 4.02
53 54 0.250513 GAGGCGACTTGGAATGGACT 59.749 55.000 0.00 0.00 44.43 3.85
54 55 0.036010 AGGCGACTTGGAATGGACTG 60.036 55.000 0.00 0.00 37.44 3.51
55 56 1.026718 GGCGACTTGGAATGGACTGG 61.027 60.000 0.00 0.00 0.00 4.00
56 57 1.648467 GCGACTTGGAATGGACTGGC 61.648 60.000 0.00 0.00 0.00 4.85
57 58 0.321564 CGACTTGGAATGGACTGGCA 60.322 55.000 0.00 0.00 0.00 4.92
58 59 1.457346 GACTTGGAATGGACTGGCAG 58.543 55.000 14.16 14.16 0.00 4.85
59 60 0.610232 ACTTGGAATGGACTGGCAGC 60.610 55.000 15.89 7.42 0.00 5.25
60 61 0.323178 CTTGGAATGGACTGGCAGCT 60.323 55.000 15.89 1.32 0.00 4.24
61 62 0.112995 TTGGAATGGACTGGCAGCTT 59.887 50.000 15.89 3.06 0.00 3.74
62 63 0.322816 TGGAATGGACTGGCAGCTTC 60.323 55.000 15.89 12.05 0.00 3.86
63 64 1.372087 GGAATGGACTGGCAGCTTCG 61.372 60.000 15.89 0.00 0.00 3.79
64 65 1.372087 GAATGGACTGGCAGCTTCGG 61.372 60.000 15.89 0.00 0.00 4.30
65 66 3.984193 ATGGACTGGCAGCTTCGGC 62.984 63.158 15.89 0.00 42.17 5.54
76 77 4.421479 CTTCGGCCGAGACGCTGT 62.421 66.667 29.20 0.00 36.46 4.40
77 78 3.916392 CTTCGGCCGAGACGCTGTT 62.916 63.158 29.20 0.00 36.46 3.16
78 79 3.509137 TTCGGCCGAGACGCTGTTT 62.509 57.895 29.20 0.00 36.46 2.83
79 80 2.126228 CGGCCGAGACGCTGTTTA 60.126 61.111 24.07 0.00 0.00 2.01
80 81 1.518572 CGGCCGAGACGCTGTTTAT 60.519 57.895 24.07 0.00 0.00 1.40
81 82 1.480219 CGGCCGAGACGCTGTTTATC 61.480 60.000 24.07 0.00 0.00 1.75
82 83 0.459585 GGCCGAGACGCTGTTTATCA 60.460 55.000 0.00 0.00 0.00 2.15
83 84 1.571919 GCCGAGACGCTGTTTATCAT 58.428 50.000 0.00 0.00 0.00 2.45
84 85 1.523095 GCCGAGACGCTGTTTATCATC 59.477 52.381 0.00 0.00 0.00 2.92
85 86 2.799917 GCCGAGACGCTGTTTATCATCT 60.800 50.000 0.00 0.00 0.00 2.90
86 87 3.046390 CCGAGACGCTGTTTATCATCTC 58.954 50.000 0.00 0.00 0.00 2.75
87 88 3.046390 CGAGACGCTGTTTATCATCTCC 58.954 50.000 0.00 0.00 30.32 3.71
88 89 3.243234 CGAGACGCTGTTTATCATCTCCT 60.243 47.826 0.00 0.00 30.32 3.69
89 90 4.688021 GAGACGCTGTTTATCATCTCCTT 58.312 43.478 0.00 0.00 0.00 3.36
90 91 4.688021 AGACGCTGTTTATCATCTCCTTC 58.312 43.478 0.00 0.00 0.00 3.46
91 92 3.798202 ACGCTGTTTATCATCTCCTTCC 58.202 45.455 0.00 0.00 0.00 3.46
92 93 3.452627 ACGCTGTTTATCATCTCCTTCCT 59.547 43.478 0.00 0.00 0.00 3.36
93 94 4.054671 CGCTGTTTATCATCTCCTTCCTC 58.945 47.826 0.00 0.00 0.00 3.71
94 95 4.202202 CGCTGTTTATCATCTCCTTCCTCT 60.202 45.833 0.00 0.00 0.00 3.69
95 96 5.055812 GCTGTTTATCATCTCCTTCCTCTG 58.944 45.833 0.00 0.00 0.00 3.35
96 97 5.163364 GCTGTTTATCATCTCCTTCCTCTGA 60.163 44.000 0.00 0.00 0.00 3.27
97 98 6.464180 GCTGTTTATCATCTCCTTCCTCTGAT 60.464 42.308 0.00 0.00 0.00 2.90
98 99 7.060383 TGTTTATCATCTCCTTCCTCTGATC 57.940 40.000 0.00 0.00 0.00 2.92
99 100 6.042552 TGTTTATCATCTCCTTCCTCTGATCC 59.957 42.308 0.00 0.00 0.00 3.36
100 101 2.969628 TCATCTCCTTCCTCTGATCCC 58.030 52.381 0.00 0.00 0.00 3.85
101 102 1.977129 CATCTCCTTCCTCTGATCCCC 59.023 57.143 0.00 0.00 0.00 4.81
102 103 1.324014 TCTCCTTCCTCTGATCCCCT 58.676 55.000 0.00 0.00 0.00 4.79
103 104 1.219213 TCTCCTTCCTCTGATCCCCTC 59.781 57.143 0.00 0.00 0.00 4.30
104 105 1.220236 CTCCTTCCTCTGATCCCCTCT 59.780 57.143 0.00 0.00 0.00 3.69
105 106 1.219213 TCCTTCCTCTGATCCCCTCTC 59.781 57.143 0.00 0.00 0.00 3.20
106 107 1.220236 CCTTCCTCTGATCCCCTCTCT 59.780 57.143 0.00 0.00 0.00 3.10
107 108 2.597455 CTTCCTCTGATCCCCTCTCTC 58.403 57.143 0.00 0.00 0.00 3.20
108 109 1.919933 TCCTCTGATCCCCTCTCTCT 58.080 55.000 0.00 0.00 0.00 3.10
109 110 2.222271 TCCTCTGATCCCCTCTCTCTT 58.778 52.381 0.00 0.00 0.00 2.85
110 111 2.091389 TCCTCTGATCCCCTCTCTCTTG 60.091 54.545 0.00 0.00 0.00 3.02
111 112 2.091389 CCTCTGATCCCCTCTCTCTTGA 60.091 54.545 0.00 0.00 0.00 3.02
112 113 3.225104 CTCTGATCCCCTCTCTCTTGAG 58.775 54.545 0.00 0.00 41.51 3.02
113 114 2.855599 TCTGATCCCCTCTCTCTTGAGA 59.144 50.000 0.13 0.13 46.13 3.27
114 115 3.466723 TCTGATCCCCTCTCTCTTGAGAT 59.533 47.826 0.41 0.00 46.93 2.75
115 116 4.078688 TCTGATCCCCTCTCTCTTGAGATT 60.079 45.833 0.41 0.00 46.93 2.40
116 117 4.222336 TGATCCCCTCTCTCTTGAGATTC 58.778 47.826 0.41 0.00 46.93 2.52
117 118 3.039252 TCCCCTCTCTCTTGAGATTCC 57.961 52.381 0.41 0.00 46.93 3.01
118 119 2.589664 TCCCCTCTCTCTTGAGATTCCT 59.410 50.000 0.41 0.00 46.93 3.36
119 120 2.965147 CCCCTCTCTCTTGAGATTCCTC 59.035 54.545 0.41 0.00 46.93 3.71
120 121 2.965147 CCCTCTCTCTTGAGATTCCTCC 59.035 54.545 0.41 0.00 46.93 4.30
121 122 2.622942 CCTCTCTCTTGAGATTCCTCCG 59.377 54.545 0.41 0.00 46.93 4.63
122 123 3.287222 CTCTCTCTTGAGATTCCTCCGT 58.713 50.000 0.41 0.00 46.93 4.69
123 124 4.456535 CTCTCTCTTGAGATTCCTCCGTA 58.543 47.826 0.41 0.00 46.93 4.02
124 125 4.856509 TCTCTCTTGAGATTCCTCCGTAA 58.143 43.478 0.41 0.00 43.73 3.18
125 126 5.450453 TCTCTCTTGAGATTCCTCCGTAAT 58.550 41.667 0.41 0.00 43.73 1.89
126 127 5.894393 TCTCTCTTGAGATTCCTCCGTAATT 59.106 40.000 0.41 0.00 43.73 1.40
127 128 6.039941 TCTCTCTTGAGATTCCTCCGTAATTC 59.960 42.308 0.41 0.00 43.73 2.17
128 129 4.933330 TCTTGAGATTCCTCCGTAATTCG 58.067 43.478 0.00 0.00 38.66 3.34
129 130 4.643334 TCTTGAGATTCCTCCGTAATTCGA 59.357 41.667 0.00 0.00 38.66 3.71
130 131 4.994907 TGAGATTCCTCCGTAATTCGAA 57.005 40.909 0.00 0.00 38.66 3.71
131 132 4.933330 TGAGATTCCTCCGTAATTCGAAG 58.067 43.478 3.35 0.00 38.66 3.79
132 133 4.401519 TGAGATTCCTCCGTAATTCGAAGT 59.598 41.667 3.35 3.02 38.66 3.01
133 134 5.105473 TGAGATTCCTCCGTAATTCGAAGTT 60.105 40.000 2.37 0.82 38.66 2.66
134 135 5.109903 AGATTCCTCCGTAATTCGAAGTTG 58.890 41.667 2.37 0.00 42.86 3.16
135 136 3.947910 TCCTCCGTAATTCGAAGTTGT 57.052 42.857 2.37 0.00 42.86 3.32
136 137 5.389859 TTCCTCCGTAATTCGAAGTTGTA 57.610 39.130 2.37 0.00 42.86 2.41
137 138 4.990257 TCCTCCGTAATTCGAAGTTGTAG 58.010 43.478 2.37 0.00 42.86 2.74
138 139 4.460382 TCCTCCGTAATTCGAAGTTGTAGT 59.540 41.667 2.37 0.00 42.86 2.73
139 140 4.797349 CCTCCGTAATTCGAAGTTGTAGTC 59.203 45.833 2.37 0.00 42.86 2.59
140 141 5.375417 TCCGTAATTCGAAGTTGTAGTCA 57.625 39.130 2.37 0.00 42.86 3.41
141 142 5.396484 TCCGTAATTCGAAGTTGTAGTCAG 58.604 41.667 2.37 0.00 42.86 3.51
142 143 5.048504 TCCGTAATTCGAAGTTGTAGTCAGT 60.049 40.000 2.37 0.00 42.86 3.41
143 144 5.060569 CCGTAATTCGAAGTTGTAGTCAGTG 59.939 44.000 2.37 0.00 42.86 3.66
144 145 5.854866 CGTAATTCGAAGTTGTAGTCAGTGA 59.145 40.000 2.37 0.00 42.86 3.41
145 146 6.361481 CGTAATTCGAAGTTGTAGTCAGTGAA 59.639 38.462 2.37 0.00 42.86 3.18
146 147 7.061905 CGTAATTCGAAGTTGTAGTCAGTGAAT 59.938 37.037 2.37 0.00 42.86 2.57
147 148 6.712241 ATTCGAAGTTGTAGTCAGTGAATG 57.288 37.500 3.35 0.00 0.00 2.67
148 149 5.447624 TCGAAGTTGTAGTCAGTGAATGA 57.552 39.130 2.72 0.00 34.79 2.57
149 150 5.838529 TCGAAGTTGTAGTCAGTGAATGAA 58.161 37.500 2.72 0.00 40.43 2.57
150 151 6.455647 TCGAAGTTGTAGTCAGTGAATGAAT 58.544 36.000 2.72 0.00 40.43 2.57
151 152 6.366061 TCGAAGTTGTAGTCAGTGAATGAATG 59.634 38.462 2.72 0.00 40.43 2.67
152 153 6.366061 CGAAGTTGTAGTCAGTGAATGAATGA 59.634 38.462 2.72 0.00 40.43 2.57
153 154 7.063898 CGAAGTTGTAGTCAGTGAATGAATGAT 59.936 37.037 2.72 0.00 40.43 2.45
154 155 7.606858 AGTTGTAGTCAGTGAATGAATGATG 57.393 36.000 2.72 0.00 40.43 3.07
155 156 7.389232 AGTTGTAGTCAGTGAATGAATGATGA 58.611 34.615 2.72 0.00 40.43 2.92
156 157 7.879677 AGTTGTAGTCAGTGAATGAATGATGAA 59.120 33.333 2.72 0.00 40.43 2.57
157 158 8.671921 GTTGTAGTCAGTGAATGAATGATGAAT 58.328 33.333 2.72 0.00 40.43 2.57
158 159 8.797350 TGTAGTCAGTGAATGAATGATGAATT 57.203 30.769 2.72 0.00 40.43 2.17
159 160 8.671028 TGTAGTCAGTGAATGAATGATGAATTG 58.329 33.333 2.72 0.00 40.43 2.32
160 161 7.933215 AGTCAGTGAATGAATGATGAATTGA 57.067 32.000 0.00 0.00 40.43 2.57
161 162 7.986562 AGTCAGTGAATGAATGATGAATTGAG 58.013 34.615 0.00 0.00 40.43 3.02
162 163 7.067129 AGTCAGTGAATGAATGATGAATTGAGG 59.933 37.037 0.00 0.00 40.43 3.86
163 164 6.320418 TCAGTGAATGAATGATGAATTGAGGG 59.680 38.462 0.00 0.00 34.02 4.30
164 165 5.597182 AGTGAATGAATGATGAATTGAGGGG 59.403 40.000 0.00 0.00 0.00 4.79
165 166 5.595542 GTGAATGAATGATGAATTGAGGGGA 59.404 40.000 0.00 0.00 0.00 4.81
166 167 6.097270 GTGAATGAATGATGAATTGAGGGGAA 59.903 38.462 0.00 0.00 0.00 3.97
167 168 6.842280 TGAATGAATGATGAATTGAGGGGAAT 59.158 34.615 0.00 0.00 0.00 3.01
168 169 8.005976 TGAATGAATGATGAATTGAGGGGAATA 58.994 33.333 0.00 0.00 0.00 1.75
169 170 8.418597 AATGAATGATGAATTGAGGGGAATAG 57.581 34.615 0.00 0.00 0.00 1.73
170 171 6.914665 TGAATGATGAATTGAGGGGAATAGT 58.085 36.000 0.00 0.00 0.00 2.12
171 172 8.044574 TGAATGATGAATTGAGGGGAATAGTA 57.955 34.615 0.00 0.00 0.00 1.82
172 173 8.159447 TGAATGATGAATTGAGGGGAATAGTAG 58.841 37.037 0.00 0.00 0.00 2.57
173 174 7.639062 ATGATGAATTGAGGGGAATAGTAGT 57.361 36.000 0.00 0.00 0.00 2.73
174 175 6.830912 TGATGAATTGAGGGGAATAGTAGTG 58.169 40.000 0.00 0.00 0.00 2.74
175 176 5.036117 TGAATTGAGGGGAATAGTAGTGC 57.964 43.478 0.00 0.00 0.00 4.40
176 177 3.753294 ATTGAGGGGAATAGTAGTGCG 57.247 47.619 0.00 0.00 0.00 5.34
177 178 2.447408 TGAGGGGAATAGTAGTGCGA 57.553 50.000 0.00 0.00 0.00 5.10
178 179 2.029623 TGAGGGGAATAGTAGTGCGAC 58.970 52.381 0.00 0.00 0.00 5.19
179 180 1.340568 GAGGGGAATAGTAGTGCGACC 59.659 57.143 0.00 0.00 0.00 4.79
180 181 0.391966 GGGGAATAGTAGTGCGACCC 59.608 60.000 0.00 0.00 35.60 4.46
181 182 0.031721 GGGAATAGTAGTGCGACCCG 59.968 60.000 0.00 0.00 0.00 5.28
182 183 1.027357 GGAATAGTAGTGCGACCCGA 58.973 55.000 0.00 0.00 0.00 5.14
183 184 1.406539 GGAATAGTAGTGCGACCCGAA 59.593 52.381 0.00 0.00 0.00 4.30
184 185 2.457970 GAATAGTAGTGCGACCCGAAC 58.542 52.381 0.00 0.00 35.31 3.95
185 186 1.466856 ATAGTAGTGCGACCCGAACA 58.533 50.000 0.01 0.00 37.97 3.18
186 187 0.806868 TAGTAGTGCGACCCGAACAG 59.193 55.000 0.01 0.00 37.97 3.16
187 188 2.092882 GTAGTGCGACCCGAACAGC 61.093 63.158 0.01 0.00 37.97 4.40
188 189 2.566570 TAGTGCGACCCGAACAGCA 61.567 57.895 0.01 0.00 37.97 4.41
189 190 2.089887 TAGTGCGACCCGAACAGCAA 62.090 55.000 0.01 0.00 37.97 3.91
190 191 2.203084 TGCGACCCGAACAGCAAA 60.203 55.556 0.00 0.00 36.60 3.68
191 192 2.250939 TGCGACCCGAACAGCAAAG 61.251 57.895 0.00 0.00 36.60 2.77
192 193 2.556287 CGACCCGAACAGCAAAGC 59.444 61.111 0.00 0.00 0.00 3.51
193 194 1.961277 CGACCCGAACAGCAAAGCT 60.961 57.895 0.00 0.00 40.77 3.74
194 195 1.507141 CGACCCGAACAGCAAAGCTT 61.507 55.000 0.00 0.00 36.40 3.74
195 196 0.238553 GACCCGAACAGCAAAGCTTC 59.761 55.000 0.00 0.00 36.40 3.86
196 197 1.207593 CCCGAACAGCAAAGCTTCG 59.792 57.895 0.00 6.21 38.25 3.79
197 198 4.826600 CGAACAGCAAAGCTTCGG 57.173 55.556 0.00 0.00 36.40 4.30
198 199 1.441016 CGAACAGCAAAGCTTCGGC 60.441 57.895 13.57 13.57 36.40 5.54
199 200 1.081175 GAACAGCAAAGCTTCGGCC 60.081 57.895 16.78 0.00 43.01 6.13
200 201 1.518903 GAACAGCAAAGCTTCGGCCT 61.519 55.000 16.78 4.97 43.01 5.19
201 202 1.109323 AACAGCAAAGCTTCGGCCTT 61.109 50.000 16.78 8.11 43.01 4.35
202 203 1.109323 ACAGCAAAGCTTCGGCCTTT 61.109 50.000 16.78 0.00 43.01 3.11
203 204 0.032540 CAGCAAAGCTTCGGCCTTTT 59.967 50.000 16.78 0.00 43.01 2.27
204 205 0.752658 AGCAAAGCTTCGGCCTTTTT 59.247 45.000 16.78 0.00 43.01 1.94
222 223 4.333633 TTTTTGGCTTTGCTTTTTGTCG 57.666 36.364 0.00 0.00 0.00 4.35
223 224 1.933247 TTGGCTTTGCTTTTTGTCGG 58.067 45.000 0.00 0.00 0.00 4.79
224 225 0.820871 TGGCTTTGCTTTTTGTCGGT 59.179 45.000 0.00 0.00 0.00 4.69
225 226 1.208259 GGCTTTGCTTTTTGTCGGTG 58.792 50.000 0.00 0.00 0.00 4.94
226 227 1.470805 GGCTTTGCTTTTTGTCGGTGT 60.471 47.619 0.00 0.00 0.00 4.16
227 228 1.587946 GCTTTGCTTTTTGTCGGTGTG 59.412 47.619 0.00 0.00 0.00 3.82
228 229 2.733858 GCTTTGCTTTTTGTCGGTGTGA 60.734 45.455 0.00 0.00 0.00 3.58
229 230 3.705604 CTTTGCTTTTTGTCGGTGTGAT 58.294 40.909 0.00 0.00 0.00 3.06
230 231 3.347958 TTGCTTTTTGTCGGTGTGATC 57.652 42.857 0.00 0.00 0.00 2.92
231 232 1.606668 TGCTTTTTGTCGGTGTGATCC 59.393 47.619 0.00 0.00 0.00 3.36
232 233 1.880027 GCTTTTTGTCGGTGTGATCCT 59.120 47.619 0.00 0.00 0.00 3.24
233 234 2.293399 GCTTTTTGTCGGTGTGATCCTT 59.707 45.455 0.00 0.00 0.00 3.36
234 235 3.243401 GCTTTTTGTCGGTGTGATCCTTT 60.243 43.478 0.00 0.00 0.00 3.11
235 236 3.980646 TTTTGTCGGTGTGATCCTTTG 57.019 42.857 0.00 0.00 0.00 2.77
236 237 1.234821 TTGTCGGTGTGATCCTTTGC 58.765 50.000 0.00 0.00 0.00 3.68
237 238 0.948623 TGTCGGTGTGATCCTTTGCG 60.949 55.000 0.00 0.00 0.00 4.85
238 239 0.949105 GTCGGTGTGATCCTTTGCGT 60.949 55.000 0.00 0.00 0.00 5.24
239 240 0.948623 TCGGTGTGATCCTTTGCGTG 60.949 55.000 0.00 0.00 0.00 5.34
240 241 1.227999 CGGTGTGATCCTTTGCGTGT 61.228 55.000 0.00 0.00 0.00 4.49
241 242 1.803334 GGTGTGATCCTTTGCGTGTA 58.197 50.000 0.00 0.00 0.00 2.90
242 243 2.356135 GGTGTGATCCTTTGCGTGTAT 58.644 47.619 0.00 0.00 0.00 2.29
243 244 2.095853 GGTGTGATCCTTTGCGTGTATG 59.904 50.000 0.00 0.00 0.00 2.39
244 245 2.742053 GTGTGATCCTTTGCGTGTATGT 59.258 45.455 0.00 0.00 0.00 2.29
245 246 2.741517 TGTGATCCTTTGCGTGTATGTG 59.258 45.455 0.00 0.00 0.00 3.21
246 247 2.742053 GTGATCCTTTGCGTGTATGTGT 59.258 45.455 0.00 0.00 0.00 3.72
247 248 3.188460 GTGATCCTTTGCGTGTATGTGTT 59.812 43.478 0.00 0.00 0.00 3.32
248 249 3.188254 TGATCCTTTGCGTGTATGTGTTG 59.812 43.478 0.00 0.00 0.00 3.33
249 250 1.876799 TCCTTTGCGTGTATGTGTTGG 59.123 47.619 0.00 0.00 0.00 3.77
250 251 1.606668 CCTTTGCGTGTATGTGTTGGT 59.393 47.619 0.00 0.00 0.00 3.67
251 252 2.604373 CCTTTGCGTGTATGTGTTGGTG 60.604 50.000 0.00 0.00 0.00 4.17
252 253 1.669604 TTGCGTGTATGTGTTGGTGT 58.330 45.000 0.00 0.00 0.00 4.16
253 254 1.669604 TGCGTGTATGTGTTGGTGTT 58.330 45.000 0.00 0.00 0.00 3.32
254 255 1.332065 TGCGTGTATGTGTTGGTGTTG 59.668 47.619 0.00 0.00 0.00 3.33
255 256 1.600013 GCGTGTATGTGTTGGTGTTGA 59.400 47.619 0.00 0.00 0.00 3.18
256 257 2.225491 GCGTGTATGTGTTGGTGTTGAT 59.775 45.455 0.00 0.00 0.00 2.57
257 258 3.304391 GCGTGTATGTGTTGGTGTTGATT 60.304 43.478 0.00 0.00 0.00 2.57
258 259 4.218265 CGTGTATGTGTTGGTGTTGATTG 58.782 43.478 0.00 0.00 0.00 2.67
259 260 4.260990 CGTGTATGTGTTGGTGTTGATTGT 60.261 41.667 0.00 0.00 0.00 2.71
260 261 4.975502 GTGTATGTGTTGGTGTTGATTGTG 59.024 41.667 0.00 0.00 0.00 3.33
261 262 4.642437 TGTATGTGTTGGTGTTGATTGTGT 59.358 37.500 0.00 0.00 0.00 3.72
262 263 3.500558 TGTGTTGGTGTTGATTGTGTG 57.499 42.857 0.00 0.00 0.00 3.82
263 264 2.192624 GTGTTGGTGTTGATTGTGTGC 58.807 47.619 0.00 0.00 0.00 4.57
264 265 1.821136 TGTTGGTGTTGATTGTGTGCA 59.179 42.857 0.00 0.00 0.00 4.57
265 266 2.429971 TGTTGGTGTTGATTGTGTGCAT 59.570 40.909 0.00 0.00 0.00 3.96
266 267 3.052036 GTTGGTGTTGATTGTGTGCATC 58.948 45.455 0.00 0.00 0.00 3.91
267 268 2.585330 TGGTGTTGATTGTGTGCATCT 58.415 42.857 0.00 0.00 0.00 2.90
268 269 3.749226 TGGTGTTGATTGTGTGCATCTA 58.251 40.909 0.00 0.00 0.00 1.98
269 270 4.140536 TGGTGTTGATTGTGTGCATCTAA 58.859 39.130 0.00 0.00 0.00 2.10
270 271 4.216042 TGGTGTTGATTGTGTGCATCTAAG 59.784 41.667 0.00 0.00 0.00 2.18
271 272 4.455533 GGTGTTGATTGTGTGCATCTAAGA 59.544 41.667 0.00 0.00 0.00 2.10
272 273 5.048782 GGTGTTGATTGTGTGCATCTAAGAA 60.049 40.000 0.00 0.00 0.00 2.52
273 274 6.437928 GTGTTGATTGTGTGCATCTAAGAAA 58.562 36.000 0.00 0.00 0.00 2.52
274 275 6.917477 GTGTTGATTGTGTGCATCTAAGAAAA 59.083 34.615 0.00 0.00 0.00 2.29
275 276 7.596248 GTGTTGATTGTGTGCATCTAAGAAAAT 59.404 33.333 0.00 0.00 0.00 1.82
276 277 8.791675 TGTTGATTGTGTGCATCTAAGAAAATA 58.208 29.630 0.00 0.00 0.00 1.40
277 278 9.065871 GTTGATTGTGTGCATCTAAGAAAATAC 57.934 33.333 0.00 0.00 0.00 1.89
278 279 8.334263 TGATTGTGTGCATCTAAGAAAATACA 57.666 30.769 0.00 0.00 0.00 2.29
279 280 8.791675 TGATTGTGTGCATCTAAGAAAATACAA 58.208 29.630 0.00 0.00 0.00 2.41
280 281 9.624697 GATTGTGTGCATCTAAGAAAATACAAA 57.375 29.630 0.00 0.00 0.00 2.83
281 282 9.979578 ATTGTGTGCATCTAAGAAAATACAAAA 57.020 25.926 0.00 0.00 0.00 2.44
282 283 8.795786 TGTGTGCATCTAAGAAAATACAAAAC 57.204 30.769 0.00 0.00 0.00 2.43
283 284 8.409371 TGTGTGCATCTAAGAAAATACAAAACA 58.591 29.630 0.00 0.00 0.00 2.83
284 285 8.690840 GTGTGCATCTAAGAAAATACAAAACAC 58.309 33.333 0.00 0.00 0.00 3.32
285 286 8.409371 TGTGCATCTAAGAAAATACAAAACACA 58.591 29.630 0.00 0.00 0.00 3.72
286 287 9.243637 GTGCATCTAAGAAAATACAAAACACAA 57.756 29.630 0.00 0.00 0.00 3.33
287 288 9.979578 TGCATCTAAGAAAATACAAAACACAAT 57.020 25.926 0.00 0.00 0.00 2.71
300 301 7.757097 ACAAAACACAATAAATAAACACGCA 57.243 28.000 0.00 0.00 0.00 5.24
301 302 8.359060 ACAAAACACAATAAATAAACACGCAT 57.641 26.923 0.00 0.00 0.00 4.73
302 303 8.272176 ACAAAACACAATAAATAAACACGCATG 58.728 29.630 0.00 0.00 0.00 4.06
303 304 8.483218 CAAAACACAATAAATAAACACGCATGA 58.517 29.630 0.00 0.00 0.00 3.07
304 305 8.755696 AAACACAATAAATAAACACGCATGAT 57.244 26.923 0.00 0.00 0.00 2.45
305 306 7.969387 ACACAATAAATAAACACGCATGATC 57.031 32.000 0.00 0.00 0.00 2.92
306 307 7.761409 ACACAATAAATAAACACGCATGATCT 58.239 30.769 0.00 0.00 0.00 2.75
307 308 7.697710 ACACAATAAATAAACACGCATGATCTG 59.302 33.333 0.00 0.00 0.00 2.90
308 309 7.697710 CACAATAAATAAACACGCATGATCTGT 59.302 33.333 0.00 0.00 0.00 3.41
309 310 7.697710 ACAATAAATAAACACGCATGATCTGTG 59.302 33.333 0.00 1.40 41.32 3.66
310 311 5.878332 AAATAAACACGCATGATCTGTGA 57.122 34.783 12.71 0.00 38.77 3.58
311 312 5.878332 AATAAACACGCATGATCTGTGAA 57.122 34.783 12.71 1.87 38.77 3.18
312 313 6.441093 AATAAACACGCATGATCTGTGAAT 57.559 33.333 12.71 5.59 38.77 2.57
313 314 7.552458 AATAAACACGCATGATCTGTGAATA 57.448 32.000 12.71 7.06 38.77 1.75
314 315 5.878332 AAACACGCATGATCTGTGAATAA 57.122 34.783 12.71 0.00 38.77 1.40
315 316 4.864916 ACACGCATGATCTGTGAATAAC 57.135 40.909 12.71 0.00 38.77 1.89
316 317 4.507710 ACACGCATGATCTGTGAATAACT 58.492 39.130 12.71 0.00 38.77 2.24
317 318 5.660460 ACACGCATGATCTGTGAATAACTA 58.340 37.500 12.71 0.00 38.77 2.24
318 319 6.106003 ACACGCATGATCTGTGAATAACTAA 58.894 36.000 12.71 0.00 38.77 2.24
319 320 6.256539 ACACGCATGATCTGTGAATAACTAAG 59.743 38.462 12.71 0.00 38.77 2.18
320 321 6.476706 CACGCATGATCTGTGAATAACTAAGA 59.523 38.462 0.00 0.00 38.77 2.10
321 322 7.170489 CACGCATGATCTGTGAATAACTAAGAT 59.830 37.037 0.00 0.00 38.77 2.40
322 323 7.712639 ACGCATGATCTGTGAATAACTAAGATT 59.287 33.333 0.00 0.00 38.77 2.40
323 324 9.196552 CGCATGATCTGTGAATAACTAAGATTA 57.803 33.333 0.00 0.00 37.57 1.75
354 355 5.722021 AAGGTGCCCTTTACATTTGTAAG 57.278 39.130 3.60 0.00 41.69 2.34
474 475 6.841229 TCAGCTCTTCCTTTATCTTCTGGATA 59.159 38.462 0.00 0.00 35.98 2.59
477 478 7.734410 AGCTCTTCCTTTATCTTCTGGATAGAT 59.266 37.037 0.00 0.00 38.07 1.98
509 510 9.665719 TTTCTTTATTTTAAAAGGCATCATCCC 57.334 29.630 6.79 0.00 37.13 3.85
510 511 8.372877 TCTTTATTTTAAAAGGCATCATCCCA 57.627 30.769 6.79 0.00 37.13 4.37
512 513 9.264719 CTTTATTTTAAAAGGCATCATCCCATC 57.735 33.333 6.79 0.00 33.64 3.51
513 514 5.612725 TTTTAAAAGGCATCATCCCATCC 57.387 39.130 0.00 0.00 0.00 3.51
514 515 2.092598 AAAAGGCATCATCCCATCCC 57.907 50.000 0.00 0.00 0.00 3.85
515 516 0.178981 AAAGGCATCATCCCATCCCG 60.179 55.000 0.00 0.00 0.00 5.14
516 517 1.355718 AAGGCATCATCCCATCCCGT 61.356 55.000 0.00 0.00 0.00 5.28
518 519 1.302832 GCATCATCCCATCCCGTCC 60.303 63.158 0.00 0.00 0.00 4.79
546 550 3.129262 TCCCATCCATGAGTTAGGTCA 57.871 47.619 0.00 0.00 0.00 4.02
596 615 4.388485 TGTACGCAAGGCATGATATCATT 58.612 39.130 15.74 0.00 46.39 2.57
643 671 3.313249 GGCATTGACGTGATTGATGATCA 59.687 43.478 0.00 0.00 42.42 2.92
668 696 1.519455 GTCCGTCGATGGAGCAAGG 60.519 63.158 26.78 0.00 39.14 3.61
743 771 0.821711 TTGTTGGTGCCACTAGTGCC 60.822 55.000 17.86 13.57 0.00 5.01
805 844 0.307453 TGTCACACAATCAAGTGCGC 59.693 50.000 0.00 0.00 43.23 6.09
818 857 4.580835 TGCGCGCACAATGTACTA 57.419 50.000 33.09 2.14 0.00 1.82
833 877 3.083293 TGTACTATGTGTCTACGTGCCA 58.917 45.455 0.00 0.00 0.00 4.92
850 898 0.108138 CCAAACTCCTACTCGCTGGG 60.108 60.000 0.00 0.00 0.00 4.45
872 920 2.456119 GGGTGAAGCAGTGATCGCG 61.456 63.158 0.00 0.00 0.00 5.87
889 937 2.805546 GCGACCCGTCTATCAGCA 59.194 61.111 0.00 0.00 0.00 4.41
914 962 6.494669 GCATAAAAGGTGCAGCTACTGAGC 62.495 50.000 20.51 16.53 42.08 4.26
947 995 1.136356 CAGCGCACACAAACACACA 59.864 52.632 11.47 0.00 0.00 3.72
971 1019 2.104963 AGAAACACCTGAGGGACTGTTC 59.895 50.000 2.38 0.00 41.55 3.18
994 1042 2.175878 CTCTGCTAGCAAGTGTTGGT 57.824 50.000 19.86 0.00 44.64 3.67
995 1043 1.802960 CTCTGCTAGCAAGTGTTGGTG 59.197 52.381 19.86 3.59 42.14 4.17
996 1044 1.416030 TCTGCTAGCAAGTGTTGGTGA 59.584 47.619 19.86 6.14 42.14 4.02
997 1045 2.038952 TCTGCTAGCAAGTGTTGGTGAT 59.961 45.455 19.86 0.00 42.14 3.06
1004 1052 2.698803 CAAGTGTTGGTGATCGATGGA 58.301 47.619 0.54 0.00 0.00 3.41
1078 1126 3.610911 GACATGAATCGGTTCCTTCCTT 58.389 45.455 5.84 0.00 33.26 3.36
1110 1160 3.426695 CCGTGAATTAACGTACTCGGTCT 60.427 47.826 14.24 0.00 42.01 3.85
1391 1462 4.521062 CGGCGAGGGAGCTTCAGG 62.521 72.222 0.00 0.00 37.29 3.86
1537 1608 4.224818 CCAATCTCCTCTCCTATTCATCCC 59.775 50.000 0.00 0.00 0.00 3.85
1572 1643 4.202202 CCATCATAGATTCGGCTCTATCCC 60.202 50.000 5.12 0.00 36.53 3.85
1579 1650 1.633774 TCGGCTCTATCCCATTCCTC 58.366 55.000 0.00 0.00 0.00 3.71
1802 1876 3.518998 GCAGGTCGCCTCGCTCTA 61.519 66.667 10.59 0.00 32.94 2.43
1812 1886 0.453793 CCTCGCTCTACACCACAGAG 59.546 60.000 0.00 0.00 42.09 3.35
1838 1912 4.232221 CACATACTTGTCGTACGTCCTTT 58.768 43.478 16.05 1.06 32.34 3.11
1844 1918 6.259550 ACTTGTCGTACGTCCTTTTATACT 57.740 37.500 16.05 0.00 0.00 2.12
1845 1919 7.377766 ACTTGTCGTACGTCCTTTTATACTA 57.622 36.000 16.05 0.00 0.00 1.82
1846 1920 7.467623 ACTTGTCGTACGTCCTTTTATACTAG 58.532 38.462 16.05 10.79 0.00 2.57
1847 1921 5.810525 TGTCGTACGTCCTTTTATACTAGC 58.189 41.667 16.05 0.00 0.00 3.42
1848 1922 5.586243 TGTCGTACGTCCTTTTATACTAGCT 59.414 40.000 16.05 0.00 0.00 3.32
1849 1923 6.761242 TGTCGTACGTCCTTTTATACTAGCTA 59.239 38.462 16.05 0.00 0.00 3.32
1851 1925 8.926710 GTCGTACGTCCTTTTATACTAGCTATA 58.073 37.037 16.05 0.00 0.00 1.31
1852 1926 8.926710 TCGTACGTCCTTTTATACTAGCTATAC 58.073 37.037 16.05 0.00 0.00 1.47
1853 1927 7.895259 CGTACGTCCTTTTATACTAGCTATACG 59.105 40.741 7.22 0.00 0.00 3.06
1856 2422 8.713271 ACGTCCTTTTATACTAGCTATACGTAC 58.287 37.037 0.00 0.00 0.00 3.67
1943 2524 2.659016 CAGAGCGGCAAGAGGTCA 59.341 61.111 1.45 0.00 38.46 4.02
1952 2533 1.675801 CAAGAGGTCAGAGCTGGCA 59.324 57.895 6.92 0.00 36.81 4.92
1958 2539 2.037136 GTCAGAGCTGGCATGCGTT 61.037 57.895 12.44 0.00 38.13 4.84
1980 2566 3.382865 TGATCTCCTAGCAGCAGTAAGTG 59.617 47.826 0.00 0.00 0.00 3.16
2140 2726 2.111878 GGCGTATGCTCTGCCCAT 59.888 61.111 6.92 0.00 43.06 4.00
2161 2747 1.141185 TGGTGTGACAACCCCACATA 58.859 50.000 0.00 0.00 45.00 2.29
2506 3099 7.494298 AGAAACGGATTTTTACAGTGCAAAAAT 59.506 29.630 21.48 21.48 44.30 1.82
2550 3143 9.830975 TGTGCACATATAGAAGTGTAACATATT 57.169 29.630 17.42 0.00 41.43 1.28
3528 4144 9.650539 TTTATATGGGAAAAATTGTGTGTCATG 57.349 29.630 0.00 0.00 0.00 3.07
3673 4290 2.092538 AGTTCAGCTGCATGGCTAGATT 60.093 45.455 9.47 0.00 41.00 2.40
3715 4332 0.391597 TGCCTCGTTCGAAACTCCTT 59.608 50.000 0.00 0.00 0.00 3.36
3985 4608 0.517316 CCGCACAGGACAAGTTTAGC 59.483 55.000 0.00 0.00 45.00 3.09
4006 4629 3.560068 GCCACCTCCGATGTATTTAACTG 59.440 47.826 0.00 0.00 0.00 3.16
4007 4630 4.682320 GCCACCTCCGATGTATTTAACTGA 60.682 45.833 0.00 0.00 0.00 3.41
4008 4631 4.809426 CCACCTCCGATGTATTTAACTGAC 59.191 45.833 0.00 0.00 0.00 3.51
4009 4632 4.809426 CACCTCCGATGTATTTAACTGACC 59.191 45.833 0.00 0.00 0.00 4.02
4010 4633 4.049186 CCTCCGATGTATTTAACTGACCG 58.951 47.826 0.00 0.00 0.00 4.79
4011 4634 3.450578 TCCGATGTATTTAACTGACCGC 58.549 45.455 0.00 0.00 0.00 5.68
4012 4635 3.119065 TCCGATGTATTTAACTGACCGCA 60.119 43.478 0.00 0.00 0.00 5.69
4013 4636 3.000925 CCGATGTATTTAACTGACCGCAC 59.999 47.826 0.00 0.00 0.00 5.34
4014 4637 3.615056 CGATGTATTTAACTGACCGCACA 59.385 43.478 0.00 0.00 0.00 4.57
4015 4638 4.259810 CGATGTATTTAACTGACCGCACAG 60.260 45.833 5.72 5.72 42.78 3.66
4046 4669 3.873361 CAGATACATCCATTTCAGCGTGT 59.127 43.478 0.00 0.00 0.00 4.49
4047 4670 3.873361 AGATACATCCATTTCAGCGTGTG 59.127 43.478 0.00 0.00 0.00 3.82
4098 4721 0.321653 ATGTGAAGAACGTGGGAGGC 60.322 55.000 0.00 0.00 0.00 4.70
4196 4819 3.305964 CTGCAGCAATCTGAAACAACTG 58.694 45.455 0.00 0.00 42.95 3.16
4203 4835 6.372659 CAGCAATCTGAAACAACTGGTAGTAT 59.627 38.462 0.00 0.00 42.95 2.12
4204 4836 6.942576 AGCAATCTGAAACAACTGGTAGTATT 59.057 34.615 0.00 0.00 0.00 1.89
4205 4837 8.100791 AGCAATCTGAAACAACTGGTAGTATTA 58.899 33.333 0.00 0.00 0.00 0.98
4206 4838 8.893727 GCAATCTGAAACAACTGGTAGTATTAT 58.106 33.333 0.00 0.00 0.00 1.28
4209 4841 9.823647 ATCTGAAACAACTGGTAGTATTATCTG 57.176 33.333 0.00 0.00 0.00 2.90
4210 4842 8.812972 TCTGAAACAACTGGTAGTATTATCTGT 58.187 33.333 0.00 0.00 0.00 3.41
4246 4882 1.789078 GCAGCCACCAGTTCTGTGTG 61.789 60.000 11.59 11.59 31.71 3.82
4254 4890 1.506493 CAGTTCTGTGTGGTGCTCTC 58.494 55.000 0.00 0.00 0.00 3.20
4255 4891 1.069823 CAGTTCTGTGTGGTGCTCTCT 59.930 52.381 0.00 0.00 0.00 3.10
4256 4892 1.069823 AGTTCTGTGTGGTGCTCTCTG 59.930 52.381 0.00 0.00 0.00 3.35
4257 4893 0.250038 TTCTGTGTGGTGCTCTCTGC 60.250 55.000 0.00 0.00 43.25 4.26
4258 4894 1.670406 CTGTGTGGTGCTCTCTGCC 60.670 63.158 0.00 0.00 42.00 4.85
4259 4895 2.109517 CTGTGTGGTGCTCTCTGCCT 62.110 60.000 0.00 0.00 42.00 4.75
4260 4896 1.670406 GTGTGGTGCTCTCTGCCTG 60.670 63.158 0.00 0.00 42.00 4.85
4264 4900 0.831711 TGGTGCTCTCTGCCTGTGTA 60.832 55.000 0.00 0.00 42.00 2.90
4323 4959 7.308770 CGATGGATGGCTGTGATAATAAAACAT 60.309 37.037 0.00 0.00 0.00 2.71
4349 4985 0.321671 GTGCCTGCCACAGTAAGAGA 59.678 55.000 0.00 0.00 44.06 3.10
4365 5001 6.935763 AGTAAGAGACTCATGCTAGACAGCG 61.936 48.000 5.02 0.00 42.46 5.18
4374 5010 0.873743 GCTAGACAGCGTCATGGCTC 60.874 60.000 10.52 0.00 42.53 4.70
4375 5011 0.593518 CTAGACAGCGTCATGGCTCG 60.594 60.000 10.52 0.00 42.53 5.03
4377 5013 2.125912 ACAGCGTCATGGCTCGTC 60.126 61.111 0.00 0.00 42.53 4.20
4378 5014 2.182791 CAGCGTCATGGCTCGTCT 59.817 61.111 0.00 0.00 42.53 4.18
4379 5015 1.313091 ACAGCGTCATGGCTCGTCTA 61.313 55.000 0.00 0.00 42.53 2.59
4381 5017 1.032657 AGCGTCATGGCTCGTCTACT 61.033 55.000 0.00 0.00 39.61 2.57
4382 5018 0.592754 GCGTCATGGCTCGTCTACTC 60.593 60.000 0.00 0.00 0.00 2.59
4383 5019 0.029567 CGTCATGGCTCGTCTACTCC 59.970 60.000 0.00 0.00 0.00 3.85
4384 5020 1.103803 GTCATGGCTCGTCTACTCCA 58.896 55.000 0.00 0.00 0.00 3.86
4406 5042 1.141881 CTAGATGACCCGTTGCGCT 59.858 57.895 9.73 0.00 0.00 5.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.607225 TCTTAGGGATGGCAATGGGT 58.393 50.000 0.00 0.00 0.00 4.51
13 14 2.754012 TTCTTAGGGATGGCAATGGG 57.246 50.000 0.00 0.00 0.00 4.00
14 15 3.825014 CTCATTCTTAGGGATGGCAATGG 59.175 47.826 0.00 0.00 0.00 3.16
15 16 3.825014 CCTCATTCTTAGGGATGGCAATG 59.175 47.826 0.00 0.00 0.00 2.82
16 17 3.753193 GCCTCATTCTTAGGGATGGCAAT 60.753 47.826 0.00 0.00 38.99 3.56
17 18 2.423373 GCCTCATTCTTAGGGATGGCAA 60.423 50.000 0.00 0.00 38.99 4.52
18 19 1.143684 GCCTCATTCTTAGGGATGGCA 59.856 52.381 0.00 0.00 38.99 4.92
19 20 1.879796 CGCCTCATTCTTAGGGATGGC 60.880 57.143 0.00 0.00 34.46 4.40
20 21 1.694150 TCGCCTCATTCTTAGGGATGG 59.306 52.381 0.00 0.00 34.46 3.51
21 22 2.366916 AGTCGCCTCATTCTTAGGGATG 59.633 50.000 0.00 0.00 34.46 3.51
22 23 2.683768 AGTCGCCTCATTCTTAGGGAT 58.316 47.619 0.00 0.00 34.46 3.85
23 24 2.160721 AGTCGCCTCATTCTTAGGGA 57.839 50.000 0.00 0.00 34.46 4.20
24 25 2.555199 CAAGTCGCCTCATTCTTAGGG 58.445 52.381 0.00 0.00 34.46 3.53
25 26 2.168521 TCCAAGTCGCCTCATTCTTAGG 59.831 50.000 0.00 0.00 37.17 2.69
26 27 3.526931 TCCAAGTCGCCTCATTCTTAG 57.473 47.619 0.00 0.00 0.00 2.18
27 28 3.973206 TTCCAAGTCGCCTCATTCTTA 57.027 42.857 0.00 0.00 0.00 2.10
28 29 2.859165 TTCCAAGTCGCCTCATTCTT 57.141 45.000 0.00 0.00 0.00 2.52
29 30 2.636830 CATTCCAAGTCGCCTCATTCT 58.363 47.619 0.00 0.00 0.00 2.40
30 31 1.672881 CCATTCCAAGTCGCCTCATTC 59.327 52.381 0.00 0.00 0.00 2.67
31 32 1.281867 TCCATTCCAAGTCGCCTCATT 59.718 47.619 0.00 0.00 0.00 2.57
32 33 0.911769 TCCATTCCAAGTCGCCTCAT 59.088 50.000 0.00 0.00 0.00 2.90
33 34 0.036388 GTCCATTCCAAGTCGCCTCA 60.036 55.000 0.00 0.00 0.00 3.86
34 35 0.250513 AGTCCATTCCAAGTCGCCTC 59.749 55.000 0.00 0.00 0.00 4.70
35 36 0.036010 CAGTCCATTCCAAGTCGCCT 60.036 55.000 0.00 0.00 0.00 5.52
36 37 1.026718 CCAGTCCATTCCAAGTCGCC 61.027 60.000 0.00 0.00 0.00 5.54
37 38 1.648467 GCCAGTCCATTCCAAGTCGC 61.648 60.000 0.00 0.00 0.00 5.19
38 39 0.321564 TGCCAGTCCATTCCAAGTCG 60.322 55.000 0.00 0.00 0.00 4.18
39 40 1.457346 CTGCCAGTCCATTCCAAGTC 58.543 55.000 0.00 0.00 0.00 3.01
40 41 0.610232 GCTGCCAGTCCATTCCAAGT 60.610 55.000 0.00 0.00 0.00 3.16
41 42 0.323178 AGCTGCCAGTCCATTCCAAG 60.323 55.000 0.00 0.00 0.00 3.61
42 43 0.112995 AAGCTGCCAGTCCATTCCAA 59.887 50.000 0.00 0.00 0.00 3.53
43 44 0.322816 GAAGCTGCCAGTCCATTCCA 60.323 55.000 0.00 0.00 0.00 3.53
44 45 1.372087 CGAAGCTGCCAGTCCATTCC 61.372 60.000 0.00 0.00 0.00 3.01
45 46 1.372087 CCGAAGCTGCCAGTCCATTC 61.372 60.000 0.00 0.00 0.00 2.67
46 47 1.377725 CCGAAGCTGCCAGTCCATT 60.378 57.895 0.00 0.00 0.00 3.16
47 48 2.270205 CCGAAGCTGCCAGTCCAT 59.730 61.111 0.00 0.00 0.00 3.41
48 49 4.704833 GCCGAAGCTGCCAGTCCA 62.705 66.667 0.00 0.00 35.50 4.02
59 60 3.916392 AACAGCGTCTCGGCCGAAG 62.916 63.158 30.53 22.97 0.00 3.79
60 61 2.144833 TAAACAGCGTCTCGGCCGAA 62.145 55.000 30.53 17.19 0.00 4.30
61 62 1.940883 ATAAACAGCGTCTCGGCCGA 61.941 55.000 29.03 29.03 0.00 5.54
62 63 1.480219 GATAAACAGCGTCTCGGCCG 61.480 60.000 22.12 22.12 0.00 6.13
63 64 0.459585 TGATAAACAGCGTCTCGGCC 60.460 55.000 0.00 0.00 0.00 6.13
64 65 1.523095 GATGATAAACAGCGTCTCGGC 59.477 52.381 0.00 0.00 0.00 5.54
65 66 3.046390 GAGATGATAAACAGCGTCTCGG 58.954 50.000 0.00 0.00 40.13 4.63
66 67 3.046390 GGAGATGATAAACAGCGTCTCG 58.954 50.000 0.00 0.00 44.34 4.04
67 68 4.314740 AGGAGATGATAAACAGCGTCTC 57.685 45.455 0.00 0.00 43.26 3.36
68 69 4.442192 GGAAGGAGATGATAAACAGCGTCT 60.442 45.833 0.00 0.00 40.13 4.18
69 70 3.804873 GGAAGGAGATGATAAACAGCGTC 59.195 47.826 0.00 0.00 40.13 5.19
70 71 3.452627 AGGAAGGAGATGATAAACAGCGT 59.547 43.478 0.00 0.00 40.13 5.07
71 72 4.054671 GAGGAAGGAGATGATAAACAGCG 58.945 47.826 0.00 0.00 40.13 5.18
72 73 5.055812 CAGAGGAAGGAGATGATAAACAGC 58.944 45.833 0.00 0.00 34.85 4.40
73 74 6.477053 TCAGAGGAAGGAGATGATAAACAG 57.523 41.667 0.00 0.00 0.00 3.16
74 75 6.042552 GGATCAGAGGAAGGAGATGATAAACA 59.957 42.308 0.00 0.00 30.98 2.83
75 76 6.463360 GGATCAGAGGAAGGAGATGATAAAC 58.537 44.000 0.00 0.00 30.98 2.01
76 77 5.545723 GGGATCAGAGGAAGGAGATGATAAA 59.454 44.000 0.00 0.00 30.98 1.40
77 78 5.090139 GGGATCAGAGGAAGGAGATGATAA 58.910 45.833 0.00 0.00 30.98 1.75
78 79 4.511841 GGGGATCAGAGGAAGGAGATGATA 60.512 50.000 0.00 0.00 30.98 2.15
79 80 3.519667 GGGATCAGAGGAAGGAGATGAT 58.480 50.000 0.00 0.00 33.44 2.45
80 81 2.427002 GGGGATCAGAGGAAGGAGATGA 60.427 54.545 0.00 0.00 0.00 2.92
81 82 1.977129 GGGGATCAGAGGAAGGAGATG 59.023 57.143 0.00 0.00 0.00 2.90
82 83 1.872367 AGGGGATCAGAGGAAGGAGAT 59.128 52.381 0.00 0.00 0.00 2.75
83 84 1.219213 GAGGGGATCAGAGGAAGGAGA 59.781 57.143 0.00 0.00 0.00 3.71
84 85 1.220236 AGAGGGGATCAGAGGAAGGAG 59.780 57.143 0.00 0.00 0.00 3.69
85 86 1.219213 GAGAGGGGATCAGAGGAAGGA 59.781 57.143 0.00 0.00 0.00 3.36
86 87 1.220236 AGAGAGGGGATCAGAGGAAGG 59.780 57.143 0.00 0.00 0.00 3.46
87 88 2.177669 AGAGAGAGGGGATCAGAGGAAG 59.822 54.545 0.00 0.00 0.00 3.46
88 89 2.222271 AGAGAGAGGGGATCAGAGGAA 58.778 52.381 0.00 0.00 0.00 3.36
89 90 1.919933 AGAGAGAGGGGATCAGAGGA 58.080 55.000 0.00 0.00 0.00 3.71
90 91 2.091389 TCAAGAGAGAGGGGATCAGAGG 60.091 54.545 0.00 0.00 0.00 3.69
91 92 3.117550 TCTCAAGAGAGAGGGGATCAGAG 60.118 52.174 0.00 0.00 45.73 3.35
92 93 2.855599 TCTCAAGAGAGAGGGGATCAGA 59.144 50.000 0.00 0.00 45.73 3.27
93 94 3.311167 TCTCAAGAGAGAGGGGATCAG 57.689 52.381 0.00 0.00 45.73 2.90
102 103 9.068445 CGAATTACGGAGGAATCTCAAGAGAGA 62.068 44.444 5.93 0.00 45.43 3.10
103 104 5.782893 ATTACGGAGGAATCTCAAGAGAG 57.217 43.478 5.93 0.00 41.33 3.20
104 105 5.221067 CGAATTACGGAGGAATCTCAAGAGA 60.221 44.000 1.74 1.74 41.69 3.10
105 106 4.979197 CGAATTACGGAGGAATCTCAAGAG 59.021 45.833 0.00 0.00 41.69 2.85
106 107 4.643334 TCGAATTACGGAGGAATCTCAAGA 59.357 41.667 0.00 0.00 41.69 3.02
107 108 4.933330 TCGAATTACGGAGGAATCTCAAG 58.067 43.478 0.00 0.00 41.69 3.02
108 109 4.994907 TCGAATTACGGAGGAATCTCAA 57.005 40.909 0.00 0.00 41.69 3.02
109 110 4.933330 CTTCGAATTACGGAGGAATCTCA 58.067 43.478 0.00 0.00 43.27 3.27
118 119 5.048504 ACTGACTACAACTTCGAATTACGGA 60.049 40.000 0.00 0.00 42.82 4.69
119 120 5.060569 CACTGACTACAACTTCGAATTACGG 59.939 44.000 0.00 0.00 42.82 4.02
120 121 5.854866 TCACTGACTACAACTTCGAATTACG 59.145 40.000 0.00 0.00 44.09 3.18
121 122 7.633361 TTCACTGACTACAACTTCGAATTAC 57.367 36.000 0.00 0.00 0.00 1.89
122 123 8.085909 TCATTCACTGACTACAACTTCGAATTA 58.914 33.333 0.00 0.00 0.00 1.40
123 124 6.929049 TCATTCACTGACTACAACTTCGAATT 59.071 34.615 0.00 0.00 0.00 2.17
124 125 6.455647 TCATTCACTGACTACAACTTCGAAT 58.544 36.000 0.00 0.00 0.00 3.34
125 126 5.838529 TCATTCACTGACTACAACTTCGAA 58.161 37.500 0.00 0.00 0.00 3.71
126 127 5.447624 TCATTCACTGACTACAACTTCGA 57.552 39.130 0.00 0.00 0.00 3.71
127 128 6.366061 TCATTCATTCACTGACTACAACTTCG 59.634 38.462 0.00 0.00 32.17 3.79
128 129 7.658179 TCATTCATTCACTGACTACAACTTC 57.342 36.000 0.00 0.00 32.17 3.01
129 130 7.879677 TCATCATTCATTCACTGACTACAACTT 59.120 33.333 0.00 0.00 32.17 2.66
130 131 7.389232 TCATCATTCATTCACTGACTACAACT 58.611 34.615 0.00 0.00 32.17 3.16
131 132 7.601073 TCATCATTCATTCACTGACTACAAC 57.399 36.000 0.00 0.00 32.17 3.32
132 133 8.797350 ATTCATCATTCATTCACTGACTACAA 57.203 30.769 0.00 0.00 32.17 2.41
133 134 8.671028 CAATTCATCATTCATTCACTGACTACA 58.329 33.333 0.00 0.00 32.17 2.74
134 135 8.886719 TCAATTCATCATTCATTCACTGACTAC 58.113 33.333 0.00 0.00 32.17 2.73
135 136 9.106070 CTCAATTCATCATTCATTCACTGACTA 57.894 33.333 0.00 0.00 32.17 2.59
136 137 7.067129 CCTCAATTCATCATTCATTCACTGACT 59.933 37.037 0.00 0.00 32.17 3.41
137 138 7.194278 CCTCAATTCATCATTCATTCACTGAC 58.806 38.462 0.00 0.00 32.17 3.51
138 139 6.320418 CCCTCAATTCATCATTCATTCACTGA 59.680 38.462 0.00 0.00 0.00 3.41
139 140 6.461092 CCCCTCAATTCATCATTCATTCACTG 60.461 42.308 0.00 0.00 0.00 3.66
140 141 5.597182 CCCCTCAATTCATCATTCATTCACT 59.403 40.000 0.00 0.00 0.00 3.41
141 142 5.595542 TCCCCTCAATTCATCATTCATTCAC 59.404 40.000 0.00 0.00 0.00 3.18
142 143 5.768752 TCCCCTCAATTCATCATTCATTCA 58.231 37.500 0.00 0.00 0.00 2.57
143 144 6.720112 TTCCCCTCAATTCATCATTCATTC 57.280 37.500 0.00 0.00 0.00 2.67
144 145 8.008922 ACTATTCCCCTCAATTCATCATTCATT 58.991 33.333 0.00 0.00 0.00 2.57
145 146 7.533083 ACTATTCCCCTCAATTCATCATTCAT 58.467 34.615 0.00 0.00 0.00 2.57
146 147 6.914665 ACTATTCCCCTCAATTCATCATTCA 58.085 36.000 0.00 0.00 0.00 2.57
147 148 8.160106 ACTACTATTCCCCTCAATTCATCATTC 58.840 37.037 0.00 0.00 0.00 2.67
148 149 7.941238 CACTACTATTCCCCTCAATTCATCATT 59.059 37.037 0.00 0.00 0.00 2.57
149 150 7.456725 CACTACTATTCCCCTCAATTCATCAT 58.543 38.462 0.00 0.00 0.00 2.45
150 151 6.688922 GCACTACTATTCCCCTCAATTCATCA 60.689 42.308 0.00 0.00 0.00 3.07
151 152 5.703130 GCACTACTATTCCCCTCAATTCATC 59.297 44.000 0.00 0.00 0.00 2.92
152 153 5.625150 GCACTACTATTCCCCTCAATTCAT 58.375 41.667 0.00 0.00 0.00 2.57
153 154 4.442893 CGCACTACTATTCCCCTCAATTCA 60.443 45.833 0.00 0.00 0.00 2.57
154 155 4.058817 CGCACTACTATTCCCCTCAATTC 58.941 47.826 0.00 0.00 0.00 2.17
155 156 3.709653 TCGCACTACTATTCCCCTCAATT 59.290 43.478 0.00 0.00 0.00 2.32
156 157 3.069729 GTCGCACTACTATTCCCCTCAAT 59.930 47.826 0.00 0.00 0.00 2.57
157 158 2.429610 GTCGCACTACTATTCCCCTCAA 59.570 50.000 0.00 0.00 0.00 3.02
158 159 2.029623 GTCGCACTACTATTCCCCTCA 58.970 52.381 0.00 0.00 0.00 3.86
159 160 1.340568 GGTCGCACTACTATTCCCCTC 59.659 57.143 0.00 0.00 0.00 4.30
160 161 1.411041 GGTCGCACTACTATTCCCCT 58.589 55.000 0.00 0.00 0.00 4.79
161 162 0.391966 GGGTCGCACTACTATTCCCC 59.608 60.000 0.00 0.00 0.00 4.81
162 163 0.031721 CGGGTCGCACTACTATTCCC 59.968 60.000 0.00 0.00 0.00 3.97
163 164 1.027357 TCGGGTCGCACTACTATTCC 58.973 55.000 0.00 0.00 0.00 3.01
164 165 2.159338 TGTTCGGGTCGCACTACTATTC 60.159 50.000 0.00 0.00 0.00 1.75
165 166 1.820519 TGTTCGGGTCGCACTACTATT 59.179 47.619 0.00 0.00 0.00 1.73
166 167 1.404391 CTGTTCGGGTCGCACTACTAT 59.596 52.381 0.00 0.00 0.00 2.12
167 168 0.806868 CTGTTCGGGTCGCACTACTA 59.193 55.000 0.00 0.00 0.00 1.82
168 169 1.585006 CTGTTCGGGTCGCACTACT 59.415 57.895 0.00 0.00 0.00 2.57
169 170 2.092882 GCTGTTCGGGTCGCACTAC 61.093 63.158 0.00 0.00 0.00 2.73
170 171 2.089887 TTGCTGTTCGGGTCGCACTA 62.090 55.000 0.00 0.00 31.24 2.74
171 172 2.933878 TTTGCTGTTCGGGTCGCACT 62.934 55.000 0.00 0.00 31.24 4.40
172 173 2.443957 CTTTGCTGTTCGGGTCGCAC 62.444 60.000 0.00 0.00 31.24 5.34
173 174 2.203084 TTTGCTGTTCGGGTCGCA 60.203 55.556 0.00 0.00 0.00 5.10
174 175 2.556287 CTTTGCTGTTCGGGTCGC 59.444 61.111 0.00 0.00 0.00 5.19
175 176 1.507141 AAGCTTTGCTGTTCGGGTCG 61.507 55.000 0.00 0.00 39.62 4.79
176 177 0.238553 GAAGCTTTGCTGTTCGGGTC 59.761 55.000 0.00 0.00 39.62 4.46
177 178 1.507141 CGAAGCTTTGCTGTTCGGGT 61.507 55.000 0.00 0.00 39.62 5.28
178 179 1.207593 CGAAGCTTTGCTGTTCGGG 59.792 57.895 0.00 0.00 39.62 5.14
179 180 4.826600 CGAAGCTTTGCTGTTCGG 57.173 55.556 0.00 0.00 39.62 4.30
180 181 1.441016 GCCGAAGCTTTGCTGTTCG 60.441 57.895 8.32 1.22 39.62 3.95
181 182 1.081175 GGCCGAAGCTTTGCTGTTC 60.081 57.895 17.96 2.24 39.62 3.18
182 183 1.109323 AAGGCCGAAGCTTTGCTGTT 61.109 50.000 17.96 11.08 39.62 3.16
183 184 1.109323 AAAGGCCGAAGCTTTGCTGT 61.109 50.000 17.96 6.67 38.49 4.40
184 185 0.032540 AAAAGGCCGAAGCTTTGCTG 59.967 50.000 17.96 4.17 38.49 4.41
185 186 0.752658 AAAAAGGCCGAAGCTTTGCT 59.247 45.000 17.96 5.20 38.49 3.91
186 187 3.289128 AAAAAGGCCGAAGCTTTGC 57.711 47.368 8.32 10.51 38.49 3.68
201 202 3.126000 CCGACAAAAAGCAAAGCCAAAAA 59.874 39.130 0.00 0.00 0.00 1.94
202 203 2.675348 CCGACAAAAAGCAAAGCCAAAA 59.325 40.909 0.00 0.00 0.00 2.44
203 204 2.275318 CCGACAAAAAGCAAAGCCAAA 58.725 42.857 0.00 0.00 0.00 3.28
204 205 1.205893 ACCGACAAAAAGCAAAGCCAA 59.794 42.857 0.00 0.00 0.00 4.52
205 206 0.820871 ACCGACAAAAAGCAAAGCCA 59.179 45.000 0.00 0.00 0.00 4.75
206 207 1.208259 CACCGACAAAAAGCAAAGCC 58.792 50.000 0.00 0.00 0.00 4.35
207 208 1.587946 CACACCGACAAAAAGCAAAGC 59.412 47.619 0.00 0.00 0.00 3.51
208 209 3.143807 TCACACCGACAAAAAGCAAAG 57.856 42.857 0.00 0.00 0.00 2.77
209 210 3.490078 GGATCACACCGACAAAAAGCAAA 60.490 43.478 0.00 0.00 0.00 3.68
210 211 2.034053 GGATCACACCGACAAAAAGCAA 59.966 45.455 0.00 0.00 0.00 3.91
211 212 1.606668 GGATCACACCGACAAAAAGCA 59.393 47.619 0.00 0.00 0.00 3.91
212 213 1.880027 AGGATCACACCGACAAAAAGC 59.120 47.619 0.00 0.00 34.73 3.51
213 214 4.290155 CAAAGGATCACACCGACAAAAAG 58.710 43.478 0.00 0.00 34.73 2.27
214 215 3.490078 GCAAAGGATCACACCGACAAAAA 60.490 43.478 0.00 0.00 34.73 1.94
215 216 2.034053 GCAAAGGATCACACCGACAAAA 59.966 45.455 0.00 0.00 34.73 2.44
216 217 1.606668 GCAAAGGATCACACCGACAAA 59.393 47.619 0.00 0.00 34.73 2.83
217 218 1.234821 GCAAAGGATCACACCGACAA 58.765 50.000 0.00 0.00 34.73 3.18
218 219 0.948623 CGCAAAGGATCACACCGACA 60.949 55.000 0.00 0.00 34.73 4.35
219 220 0.949105 ACGCAAAGGATCACACCGAC 60.949 55.000 0.00 0.00 34.73 4.79
220 221 0.948623 CACGCAAAGGATCACACCGA 60.949 55.000 0.00 0.00 34.73 4.69
221 222 1.227999 ACACGCAAAGGATCACACCG 61.228 55.000 0.00 0.00 34.73 4.94
222 223 1.803334 TACACGCAAAGGATCACACC 58.197 50.000 0.00 0.00 0.00 4.16
223 224 2.742053 ACATACACGCAAAGGATCACAC 59.258 45.455 0.00 0.00 0.00 3.82
224 225 2.741517 CACATACACGCAAAGGATCACA 59.258 45.455 0.00 0.00 0.00 3.58
225 226 2.742053 ACACATACACGCAAAGGATCAC 59.258 45.455 0.00 0.00 0.00 3.06
226 227 3.052455 ACACATACACGCAAAGGATCA 57.948 42.857 0.00 0.00 0.00 2.92
227 228 3.426159 CCAACACATACACGCAAAGGATC 60.426 47.826 0.00 0.00 0.00 3.36
228 229 2.487762 CCAACACATACACGCAAAGGAT 59.512 45.455 0.00 0.00 0.00 3.24
229 230 1.876799 CCAACACATACACGCAAAGGA 59.123 47.619 0.00 0.00 0.00 3.36
230 231 1.606668 ACCAACACATACACGCAAAGG 59.393 47.619 0.00 0.00 0.00 3.11
231 232 2.032799 ACACCAACACATACACGCAAAG 59.967 45.455 0.00 0.00 0.00 2.77
232 233 2.017782 ACACCAACACATACACGCAAA 58.982 42.857 0.00 0.00 0.00 3.68
233 234 1.669604 ACACCAACACATACACGCAA 58.330 45.000 0.00 0.00 0.00 4.85
234 235 1.332065 CAACACCAACACATACACGCA 59.668 47.619 0.00 0.00 0.00 5.24
235 236 1.600013 TCAACACCAACACATACACGC 59.400 47.619 0.00 0.00 0.00 5.34
236 237 4.218265 CAATCAACACCAACACATACACG 58.782 43.478 0.00 0.00 0.00 4.49
237 238 4.975502 CACAATCAACACCAACACATACAC 59.024 41.667 0.00 0.00 0.00 2.90
238 239 4.642437 ACACAATCAACACCAACACATACA 59.358 37.500 0.00 0.00 0.00 2.29
239 240 4.975502 CACACAATCAACACCAACACATAC 59.024 41.667 0.00 0.00 0.00 2.39
240 241 4.498850 GCACACAATCAACACCAACACATA 60.499 41.667 0.00 0.00 0.00 2.29
241 242 3.737663 GCACACAATCAACACCAACACAT 60.738 43.478 0.00 0.00 0.00 3.21
242 243 2.416566 GCACACAATCAACACCAACACA 60.417 45.455 0.00 0.00 0.00 3.72
243 244 2.192624 GCACACAATCAACACCAACAC 58.807 47.619 0.00 0.00 0.00 3.32
244 245 1.821136 TGCACACAATCAACACCAACA 59.179 42.857 0.00 0.00 0.00 3.33
245 246 2.575694 TGCACACAATCAACACCAAC 57.424 45.000 0.00 0.00 0.00 3.77
246 247 2.957680 AGATGCACACAATCAACACCAA 59.042 40.909 0.00 0.00 0.00 3.67
247 248 2.585330 AGATGCACACAATCAACACCA 58.415 42.857 0.00 0.00 0.00 4.17
248 249 4.455533 TCTTAGATGCACACAATCAACACC 59.544 41.667 0.00 0.00 0.00 4.16
249 250 5.611796 TCTTAGATGCACACAATCAACAC 57.388 39.130 0.00 0.00 0.00 3.32
250 251 6.631971 TTTCTTAGATGCACACAATCAACA 57.368 33.333 0.00 0.00 0.00 3.33
251 252 9.065871 GTATTTTCTTAGATGCACACAATCAAC 57.934 33.333 0.00 0.00 0.00 3.18
252 253 8.791675 TGTATTTTCTTAGATGCACACAATCAA 58.208 29.630 0.00 0.00 0.00 2.57
253 254 8.334263 TGTATTTTCTTAGATGCACACAATCA 57.666 30.769 0.00 0.00 0.00 2.57
254 255 9.624697 TTTGTATTTTCTTAGATGCACACAATC 57.375 29.630 0.00 0.00 0.00 2.67
255 256 9.979578 TTTTGTATTTTCTTAGATGCACACAAT 57.020 25.926 0.00 0.00 0.00 2.71
256 257 9.243637 GTTTTGTATTTTCTTAGATGCACACAA 57.756 29.630 0.00 0.00 0.00 3.33
257 258 8.409371 TGTTTTGTATTTTCTTAGATGCACACA 58.591 29.630 0.00 0.00 0.00 3.72
258 259 8.690840 GTGTTTTGTATTTTCTTAGATGCACAC 58.309 33.333 0.00 0.00 0.00 3.82
259 260 8.409371 TGTGTTTTGTATTTTCTTAGATGCACA 58.591 29.630 0.00 0.00 0.00 4.57
260 261 8.795786 TGTGTTTTGTATTTTCTTAGATGCAC 57.204 30.769 0.00 0.00 0.00 4.57
261 262 9.979578 ATTGTGTTTTGTATTTTCTTAGATGCA 57.020 25.926 0.00 0.00 0.00 3.96
274 275 9.464714 TGCGTGTTTATTTATTGTGTTTTGTAT 57.535 25.926 0.00 0.00 0.00 2.29
275 276 8.851960 TGCGTGTTTATTTATTGTGTTTTGTA 57.148 26.923 0.00 0.00 0.00 2.41
276 277 7.757097 TGCGTGTTTATTTATTGTGTTTTGT 57.243 28.000 0.00 0.00 0.00 2.83
277 278 8.483218 TCATGCGTGTTTATTTATTGTGTTTTG 58.517 29.630 5.68 0.00 0.00 2.44
278 279 8.581057 TCATGCGTGTTTATTTATTGTGTTTT 57.419 26.923 5.68 0.00 0.00 2.43
279 280 8.755696 ATCATGCGTGTTTATTTATTGTGTTT 57.244 26.923 5.68 0.00 0.00 2.83
280 281 8.243426 AGATCATGCGTGTTTATTTATTGTGTT 58.757 29.630 5.68 0.00 0.00 3.32
281 282 7.697710 CAGATCATGCGTGTTTATTTATTGTGT 59.302 33.333 5.68 0.00 0.00 3.72
282 283 7.697710 ACAGATCATGCGTGTTTATTTATTGTG 59.302 33.333 5.68 0.00 0.00 3.33
283 284 7.697710 CACAGATCATGCGTGTTTATTTATTGT 59.302 33.333 5.68 0.00 0.00 2.71
284 285 7.909641 TCACAGATCATGCGTGTTTATTTATTG 59.090 33.333 5.68 0.00 32.42 1.90
285 286 7.984391 TCACAGATCATGCGTGTTTATTTATT 58.016 30.769 5.68 0.00 32.42 1.40
286 287 7.552458 TCACAGATCATGCGTGTTTATTTAT 57.448 32.000 5.68 0.00 32.42 1.40
287 288 6.976636 TCACAGATCATGCGTGTTTATTTA 57.023 33.333 5.68 0.00 32.42 1.40
288 289 5.878332 TCACAGATCATGCGTGTTTATTT 57.122 34.783 5.68 0.00 32.42 1.40
289 290 5.878332 TTCACAGATCATGCGTGTTTATT 57.122 34.783 5.68 0.00 32.42 1.40
290 291 7.280876 AGTTATTCACAGATCATGCGTGTTTAT 59.719 33.333 5.68 0.00 32.42 1.40
291 292 6.593770 AGTTATTCACAGATCATGCGTGTTTA 59.406 34.615 5.68 0.00 32.42 2.01
292 293 5.412594 AGTTATTCACAGATCATGCGTGTTT 59.587 36.000 5.68 0.00 32.42 2.83
293 294 4.937620 AGTTATTCACAGATCATGCGTGTT 59.062 37.500 5.68 0.00 32.42 3.32
294 295 4.507710 AGTTATTCACAGATCATGCGTGT 58.492 39.130 5.68 0.00 32.42 4.49
295 296 6.476706 TCTTAGTTATTCACAGATCATGCGTG 59.523 38.462 0.00 0.00 0.00 5.34
296 297 6.573434 TCTTAGTTATTCACAGATCATGCGT 58.427 36.000 0.00 0.00 0.00 5.24
297 298 7.649370 ATCTTAGTTATTCACAGATCATGCG 57.351 36.000 0.00 0.00 0.00 4.73
362 363 3.485463 TCCACTGAAATTGGAACGAGT 57.515 42.857 0.00 0.00 40.35 4.18
436 437 2.593026 AGAGCTGAGTAGAGTATGGGC 58.407 52.381 0.00 0.00 0.00 5.36
503 504 1.073783 ATGGGACGGGATGGGATGA 60.074 57.895 0.00 0.00 0.00 2.92
504 505 1.376466 GATGGGACGGGATGGGATG 59.624 63.158 0.00 0.00 0.00 3.51
505 506 1.847968 GGATGGGACGGGATGGGAT 60.848 63.158 0.00 0.00 0.00 3.85
506 507 2.447765 GGATGGGACGGGATGGGA 60.448 66.667 0.00 0.00 0.00 4.37
509 510 1.376466 GATGGGATGGGACGGGATG 59.624 63.158 0.00 0.00 0.00 3.51
510 511 1.847968 GGATGGGATGGGACGGGAT 60.848 63.158 0.00 0.00 0.00 3.85
512 513 3.570212 GGGATGGGATGGGACGGG 61.570 72.222 0.00 0.00 0.00 5.28
513 514 2.129555 GATGGGATGGGATGGGACGG 62.130 65.000 0.00 0.00 0.00 4.79
514 515 1.376466 GATGGGATGGGATGGGACG 59.624 63.158 0.00 0.00 0.00 4.79
515 516 1.067762 TGGATGGGATGGGATGGGAC 61.068 60.000 0.00 0.00 0.00 4.46
516 517 0.103228 ATGGATGGGATGGGATGGGA 60.103 55.000 0.00 0.00 0.00 4.37
518 519 1.005569 CTCATGGATGGGATGGGATGG 59.994 57.143 0.00 0.00 0.00 3.51
546 550 2.852449 TCCCAGAACCAGAATAATGCCT 59.148 45.455 0.00 0.00 0.00 4.75
596 615 1.068083 GCGAGCGAATGGATCAGGA 59.932 57.895 0.00 0.00 0.00 3.86
805 844 4.204370 CGTAGACACATAGTACATTGTGCG 59.796 45.833 21.41 15.17 45.59 5.34
809 848 4.503007 GGCACGTAGACACATAGTACATTG 59.497 45.833 0.00 0.00 0.00 2.82
816 855 3.585862 AGTTTGGCACGTAGACACATAG 58.414 45.455 0.00 0.00 0.00 2.23
817 856 3.581755 GAGTTTGGCACGTAGACACATA 58.418 45.455 0.00 0.00 0.00 2.29
818 857 2.413837 GAGTTTGGCACGTAGACACAT 58.586 47.619 0.00 0.00 0.00 3.21
833 877 1.187087 CTCCCAGCGAGTAGGAGTTT 58.813 55.000 0.00 0.00 41.96 2.66
850 898 1.731720 GATCACTGCTTCACCCACTC 58.268 55.000 0.00 0.00 0.00 3.51
855 903 3.084579 CGCGATCACTGCTTCACC 58.915 61.111 0.00 0.00 0.00 4.02
872 920 0.872021 CTTGCTGATAGACGGGTCGC 60.872 60.000 0.00 0.00 34.09 5.19
882 930 4.015764 TGCACCTTTTATGCTTGCTGATA 58.984 39.130 0.00 0.00 43.77 2.15
889 937 3.441572 CAGTAGCTGCACCTTTTATGCTT 59.558 43.478 4.12 0.00 43.77 3.91
914 962 1.743252 GCTGCTTCTGGAGAACCCG 60.743 63.158 0.00 0.00 37.93 5.28
915 963 1.743252 CGCTGCTTCTGGAGAACCC 60.743 63.158 0.00 0.00 33.10 4.11
947 995 2.127708 AGTCCCTCAGGTGTTTCTTGT 58.872 47.619 0.00 0.00 0.00 3.16
990 1038 1.209504 GGAGGTTCCATCGATCACCAA 59.790 52.381 16.66 0.00 36.28 3.67
991 1039 0.830648 GGAGGTTCCATCGATCACCA 59.169 55.000 16.66 0.00 36.28 4.17
992 1040 1.069358 GAGGAGGTTCCATCGATCACC 59.931 57.143 9.16 9.16 39.61 4.02
993 1041 1.069358 GGAGGAGGTTCCATCGATCAC 59.931 57.143 0.00 0.00 39.61 3.06
994 1042 1.414158 GGAGGAGGTTCCATCGATCA 58.586 55.000 0.00 0.00 39.61 2.92
995 1043 0.682292 GGGAGGAGGTTCCATCGATC 59.318 60.000 0.00 0.00 39.61 3.69
996 1044 0.764752 GGGGAGGAGGTTCCATCGAT 60.765 60.000 0.00 0.00 39.61 3.59
997 1045 1.382695 GGGGAGGAGGTTCCATCGA 60.383 63.158 0.00 0.00 39.61 3.59
1004 1052 1.157751 TTCTCGTGGGGAGGAGGTT 59.842 57.895 0.00 0.00 43.34 3.50
1078 1126 3.075884 GTTAATTCACGGTAAGGTGCCA 58.924 45.455 0.00 0.00 37.83 4.92
1110 1160 5.782893 AATCCAGTCAAACCAAATCGAAA 57.217 34.783 0.00 0.00 0.00 3.46
1298 1360 4.675029 CACCGTCGTCACCCCCAC 62.675 72.222 0.00 0.00 0.00 4.61
1301 1363 4.368543 GTCCACCGTCGTCACCCC 62.369 72.222 0.00 0.00 0.00 4.95
1302 1364 4.712425 CGTCCACCGTCGTCACCC 62.712 72.222 0.00 0.00 0.00 4.61
1312 1374 4.295119 ACCGTCTGCACGTCCACC 62.295 66.667 0.00 0.00 45.17 4.61
1319 1381 4.961511 TGGCGTCACCGTCTGCAC 62.962 66.667 0.00 0.00 43.94 4.57
1320 1382 4.961511 GTGGCGTCACCGTCTGCA 62.962 66.667 9.56 0.00 43.94 4.41
1347 1409 4.712425 CGTCCACCGTCGTCACCC 62.712 72.222 0.00 0.00 0.00 4.61
1385 1456 1.447489 CGTCCTGCTGCTCCTGAAG 60.447 63.158 0.00 0.00 0.00 3.02
1386 1457 2.659016 CGTCCTGCTGCTCCTGAA 59.341 61.111 0.00 0.00 0.00 3.02
1387 1458 3.385384 CCGTCCTGCTGCTCCTGA 61.385 66.667 0.00 0.00 0.00 3.86
1390 1461 4.479993 ATGCCGTCCTGCTGCTCC 62.480 66.667 0.00 0.00 0.00 4.70
1391 1462 2.937379 ATCATGCCGTCCTGCTGCTC 62.937 60.000 0.00 0.00 0.00 4.26
1512 1583 6.019748 GGATGAATAGGAGAGGAGATTGGTA 58.980 44.000 0.00 0.00 0.00 3.25
1537 1608 2.099756 TCTATGATGGCGTCAGTGTCAG 59.900 50.000 15.57 7.04 40.92 3.51
1572 1643 3.885297 AGGTTAATTGATGCGGAGGAATG 59.115 43.478 0.00 0.00 0.00 2.67
1579 1650 1.597663 GACGGAGGTTAATTGATGCGG 59.402 52.381 0.00 0.00 0.00 5.69
1718 1792 2.305928 CACCCACCAAATCAGTTCACA 58.694 47.619 0.00 0.00 0.00 3.58
1719 1793 1.613437 CCACCCACCAAATCAGTTCAC 59.387 52.381 0.00 0.00 0.00 3.18
1802 1876 2.104792 AGTATGTGTTGCTCTGTGGTGT 59.895 45.455 0.00 0.00 0.00 4.16
1812 1886 3.348795 CGTACGACAAGTATGTGTTGC 57.651 47.619 10.44 0.00 40.74 4.17
1943 2524 1.077930 ATCAACGCATGCCAGCTCT 60.078 52.632 13.15 0.00 0.00 4.09
1952 2533 1.539929 GCTGCTAGGAGATCAACGCAT 60.540 52.381 16.44 0.00 0.00 4.73
1958 2539 3.382865 CACTTACTGCTGCTAGGAGATCA 59.617 47.826 16.44 3.39 35.49 2.92
1980 2566 7.743400 GTGTATTTACCTCTTCGTTTTACTTGC 59.257 37.037 0.00 0.00 0.00 4.01
1988 2574 5.128335 CCCCTAGTGTATTTACCTCTTCGTT 59.872 44.000 0.00 0.00 0.00 3.85
1989 2575 4.648307 CCCCTAGTGTATTTACCTCTTCGT 59.352 45.833 0.00 0.00 0.00 3.85
1990 2576 4.648307 ACCCCTAGTGTATTTACCTCTTCG 59.352 45.833 0.00 0.00 0.00 3.79
1991 2577 5.915175 CACCCCTAGTGTATTTACCTCTTC 58.085 45.833 0.00 0.00 41.93 2.87
2161 2747 1.220206 CCCGCTCTCTGCAACTGAT 59.780 57.895 0.00 0.00 43.06 2.90
2249 2835 6.292168 CGCTTATACTGACATAGGTTTTTCCG 60.292 42.308 0.00 0.00 41.99 4.30
2314 2906 6.003326 TGATTGCCTATTCAACAGAGTTTGA 58.997 36.000 0.00 0.00 33.55 2.69
2550 3143 7.042590 GCACAGATTTTGATGAAAATTCACACA 60.043 33.333 4.32 0.04 41.06 3.72
3863 4486 2.728690 ATTCCAACGTACGTGCTGTA 57.271 45.000 23.57 8.00 0.00 2.74
3985 4608 4.809426 GTCAGTTAAATACATCGGAGGTGG 59.191 45.833 5.42 0.00 0.00 4.61
4006 4629 3.585862 TCTGAACTATTTCTGTGCGGTC 58.414 45.455 0.00 0.00 33.51 4.79
4007 4630 3.678056 TCTGAACTATTTCTGTGCGGT 57.322 42.857 0.00 0.00 33.51 5.68
4008 4631 5.109210 TGTATCTGAACTATTTCTGTGCGG 58.891 41.667 0.00 0.00 33.51 5.69
4009 4632 6.074088 GGATGTATCTGAACTATTTCTGTGCG 60.074 42.308 0.00 0.00 33.51 5.34
4010 4633 6.763135 TGGATGTATCTGAACTATTTCTGTGC 59.237 38.462 0.00 0.00 33.51 4.57
4011 4634 8.899427 ATGGATGTATCTGAACTATTTCTGTG 57.101 34.615 0.00 0.00 33.51 3.66
4012 4635 9.911788 AAATGGATGTATCTGAACTATTTCTGT 57.088 29.630 0.00 0.00 33.51 3.41
4046 4669 6.126968 CCCCTGCATATATCACTCATCATACA 60.127 42.308 0.00 0.00 0.00 2.29
4047 4670 6.126940 ACCCCTGCATATATCACTCATCATAC 60.127 42.308 0.00 0.00 0.00 2.39
4110 4733 1.891919 GAGTCCGTTGTGCAGCCAA 60.892 57.895 0.00 0.00 0.00 4.52
4203 4835 8.695456 TGCAGAGTTGATAGATGTTACAGATAA 58.305 33.333 0.00 0.00 0.00 1.75
4204 4836 8.237811 TGCAGAGTTGATAGATGTTACAGATA 57.762 34.615 0.00 0.00 0.00 1.98
4205 4837 7.117285 TGCAGAGTTGATAGATGTTACAGAT 57.883 36.000 0.00 0.00 0.00 2.90
4206 4838 6.530019 TGCAGAGTTGATAGATGTTACAGA 57.470 37.500 0.00 0.00 0.00 3.41
4209 4841 4.509600 GGCTGCAGAGTTGATAGATGTTAC 59.490 45.833 20.43 0.00 0.00 2.50
4210 4842 4.162131 TGGCTGCAGAGTTGATAGATGTTA 59.838 41.667 20.43 0.00 0.00 2.41
4211 4843 3.054875 TGGCTGCAGAGTTGATAGATGTT 60.055 43.478 20.43 0.00 0.00 2.71
4223 4859 0.954449 CAGAACTGGTGGCTGCAGAG 60.954 60.000 20.43 7.96 0.00 3.35
4227 4863 1.526917 ACACAGAACTGGTGGCTGC 60.527 57.895 6.76 0.00 40.54 5.25
4254 4890 6.168389 TCATAGATGCATTATACACAGGCAG 58.832 40.000 0.00 0.00 37.96 4.85
4255 4891 6.112927 TCATAGATGCATTATACACAGGCA 57.887 37.500 0.00 0.00 39.03 4.75
4256 4892 7.470079 CATTCATAGATGCATTATACACAGGC 58.530 38.462 0.00 0.00 0.00 4.85
4297 4933 6.017192 TGTTTTATTATCACAGCCATCCATCG 60.017 38.462 0.00 0.00 0.00 3.84
4365 5001 1.103803 TGGAGTAGACGAGCCATGAC 58.896 55.000 0.00 0.00 0.00 3.06
4366 5002 1.847328 TTGGAGTAGACGAGCCATGA 58.153 50.000 0.00 0.00 0.00 3.07
4371 5007 5.701750 TCATCTAGTATTGGAGTAGACGAGC 59.298 44.000 0.00 0.00 41.88 5.03
4374 5010 5.181622 GGGTCATCTAGTATTGGAGTAGACG 59.818 48.000 0.00 0.00 41.88 4.18
4375 5011 5.181622 CGGGTCATCTAGTATTGGAGTAGAC 59.818 48.000 0.00 0.00 41.88 2.59
4377 5013 5.071370 ACGGGTCATCTAGTATTGGAGTAG 58.929 45.833 0.00 0.00 32.91 2.57
4378 5014 5.057843 ACGGGTCATCTAGTATTGGAGTA 57.942 43.478 0.00 0.00 0.00 2.59
4379 5015 3.912248 ACGGGTCATCTAGTATTGGAGT 58.088 45.455 0.00 0.00 0.00 3.85
4381 5017 3.181469 GCAACGGGTCATCTAGTATTGGA 60.181 47.826 0.00 0.00 0.00 3.53
4382 5018 3.131396 GCAACGGGTCATCTAGTATTGG 58.869 50.000 0.00 0.00 0.00 3.16
4383 5019 2.794910 CGCAACGGGTCATCTAGTATTG 59.205 50.000 0.00 0.00 0.00 1.90
4384 5020 2.802057 GCGCAACGGGTCATCTAGTATT 60.802 50.000 0.30 0.00 0.00 1.89
4429 5065 4.614555 TGTATGCTTTCAATACTTGGCG 57.385 40.909 0.00 0.00 0.00 5.69
4525 5161 6.653989 ACTTCCTTTTAGTCCATCATGGTAG 58.346 40.000 2.79 0.00 39.03 3.18



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.