Multiple sequence alignment - TraesCS7A01G150000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G150000 chr7A 100.000 3296 0 0 1 3296 103070485 103073780 0.000000e+00 6087.0
1 TraesCS7A01G150000 chr7A 83.901 1292 180 18 1014 2294 103115834 103114560 0.000000e+00 1208.0
2 TraesCS7A01G150000 chr7A 94.208 259 11 4 2550 2807 424976607 424976352 3.080000e-105 392.0
3 TraesCS7A01G150000 chr7D 93.682 1757 88 11 798 2549 100939352 100941090 0.000000e+00 2608.0
4 TraesCS7A01G150000 chr7D 95.398 1456 43 10 903 2346 100307816 100306373 0.000000e+00 2296.0
5 TraesCS7A01G150000 chr7D 83.926 1294 180 18 1014 2296 100987730 100986454 0.000000e+00 1212.0
6 TraesCS7A01G150000 chr7D 89.082 632 52 6 1 618 100310273 100309645 0.000000e+00 769.0
7 TraesCS7A01G150000 chr7D 91.727 411 31 2 2804 3212 100941089 100941498 4.770000e-158 568.0
8 TraesCS7A01G150000 chr7D 94.574 258 12 1 2550 2805 369463526 369463269 6.630000e-107 398.0
9 TraesCS7A01G150000 chr7D 78.744 207 22 18 815 1003 100938790 100938992 5.780000e-23 119.0
10 TraesCS7A01G150000 chr7D 91.837 49 4 0 2425 2473 626257439 626257391 5.900000e-08 69.4
11 TraesCS7A01G150000 chr7B 93.641 1604 64 17 903 2499 57065842 57067414 0.000000e+00 2362.0
12 TraesCS7A01G150000 chr7B 94.059 1397 67 10 903 2299 56390435 56389055 0.000000e+00 2106.0
13 TraesCS7A01G150000 chr7B 84.068 1293 182 12 1013 2296 57269333 57268056 0.000000e+00 1225.0
14 TraesCS7A01G150000 chr7B 88.430 484 43 1 1 471 56456480 56455997 3.690000e-159 571.0
15 TraesCS7A01G150000 chr7B 85.586 444 51 5 1 431 57062950 57063393 1.390000e-123 453.0
16 TraesCS7A01G150000 chr7B 91.753 194 14 2 425 618 57065520 57065711 5.420000e-68 268.0
17 TraesCS7A01G150000 chr7B 90.385 156 13 1 463 618 56449446 56449293 1.550000e-48 204.0
18 TraesCS7A01G150000 chr7B 91.549 142 2 5 2366 2499 56388757 56388618 1.560000e-43 187.0
19 TraesCS7A01G150000 chr7B 86.957 115 6 3 798 903 57065700 57065814 1.610000e-23 121.0
20 TraesCS7A01G150000 chr7B 97.727 44 1 0 2804 2847 56388587 56388544 3.530000e-10 76.8
21 TraesCS7A01G150000 chr7B 88.889 54 6 0 2425 2478 726008113 726008060 2.120000e-07 67.6
22 TraesCS7A01G150000 chr7B 87.037 54 7 0 2425 2478 725825318 725825371 9.880000e-06 62.1
23 TraesCS7A01G150000 chr6B 83.577 1297 202 7 997 2289 11173259 11174548 0.000000e+00 1205.0
24 TraesCS7A01G150000 chr6B 95.238 252 12 0 2550 2801 347227393 347227142 1.840000e-107 399.0
25 TraesCS7A01G150000 chr6B 99.451 182 1 0 620 801 613442750 613442569 6.820000e-87 331.0
26 TraesCS7A01G150000 chr3D 83.126 1286 191 15 1014 2289 428533898 428532629 0.000000e+00 1149.0
27 TraesCS7A01G150000 chr3D 93.116 276 15 3 2542 2814 269465754 269465480 5.120000e-108 401.0
28 TraesCS7A01G150000 chr2D 94.636 261 12 1 2547 2805 541547288 541547548 1.420000e-108 403.0
29 TraesCS7A01G150000 chr4A 95.181 249 12 0 2547 2795 615435031 615435279 8.570000e-106 394.0
30 TraesCS7A01G150000 chr4A 100.000 183 0 0 620 802 590600581 590600763 4.070000e-89 339.0
31 TraesCS7A01G150000 chr4A 99.451 182 1 0 620 801 86932538 86932719 6.820000e-87 331.0
32 TraesCS7A01G150000 chr4A 95.082 183 7 2 620 801 734432066 734432247 1.500000e-73 287.0
33 TraesCS7A01G150000 chr2B 94.141 256 15 0 2550 2805 5367700 5367445 1.110000e-104 390.0
34 TraesCS7A01G150000 chr5B 93.798 258 16 0 2550 2807 198382034 198381777 3.990000e-104 388.0
35 TraesCS7A01G150000 chr5B 98.907 183 2 0 619 801 429095752 429095934 8.820000e-86 327.0
36 TraesCS7A01G150000 chr6A 92.857 266 16 2 2550 2812 55267320 55267055 1.860000e-102 383.0
37 TraesCS7A01G150000 chr5A 100.000 183 0 0 619 801 57441715 57441533 4.070000e-89 339.0
38 TraesCS7A01G150000 chr5A 98.901 182 2 0 620 801 707234727 707234908 3.170000e-85 326.0
39 TraesCS7A01G150000 chr4B 96.133 181 6 1 620 799 633753219 633753039 8.940000e-76 294.0
40 TraesCS7A01G150000 chr4B 93.023 43 2 1 161 202 633151856 633151814 9.880000e-06 62.1
41 TraesCS7A01G150000 chr2A 96.133 181 4 3 622 801 753087123 753086945 3.220000e-75 292.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G150000 chr7A 103070485 103073780 3295 False 6087.000000 6087 100.00000 1 3296 1 chr7A.!!$F1 3295
1 TraesCS7A01G150000 chr7A 103114560 103115834 1274 True 1208.000000 1208 83.90100 1014 2294 1 chr7A.!!$R1 1280
2 TraesCS7A01G150000 chr7D 100306373 100310273 3900 True 1532.500000 2296 92.24000 1 2346 2 chr7D.!!$R4 2345
3 TraesCS7A01G150000 chr7D 100986454 100987730 1276 True 1212.000000 1212 83.92600 1014 2296 1 chr7D.!!$R1 1282
4 TraesCS7A01G150000 chr7D 100938790 100941498 2708 False 1098.333333 2608 88.05100 798 3212 3 chr7D.!!$F1 2414
5 TraesCS7A01G150000 chr7B 57268056 57269333 1277 True 1225.000000 1225 84.06800 1013 2296 1 chr7B.!!$R3 1283
6 TraesCS7A01G150000 chr7B 57062950 57067414 4464 False 801.000000 2362 89.48425 1 2499 4 chr7B.!!$F2 2498
7 TraesCS7A01G150000 chr7B 56388544 56390435 1891 True 789.933333 2106 94.44500 903 2847 3 chr7B.!!$R5 1944
8 TraesCS7A01G150000 chr6B 11173259 11174548 1289 False 1205.000000 1205 83.57700 997 2289 1 chr6B.!!$F1 1292
9 TraesCS7A01G150000 chr3D 428532629 428533898 1269 True 1149.000000 1149 83.12600 1014 2289 1 chr3D.!!$R2 1275

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
420 435 0.034186 AACCGTCCATGTGGCATGAT 60.034 50.0 10.34 0.0 34.44 2.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2313 6241 0.032815 TCCATGCAACGAACGTCAGA 59.967 50.0 0.0 0.0 0.0 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 78 9.226606 TGATTTAGTTATTTTCGTCCAGACATT 57.773 29.630 0.00 0.00 0.00 2.71
76 79 9.490663 GATTTAGTTATTTTCGTCCAGACATTG 57.509 33.333 0.00 0.00 0.00 2.82
108 111 8.648422 TTTATGTCATCACGAAATTTTACACG 57.352 30.769 0.00 0.00 0.00 4.49
116 119 3.046390 CGAAATTTTACACGCAGGCAAA 58.954 40.909 0.00 0.00 0.00 3.68
212 226 6.436218 AGCTCGGGATTATAAAACCACTTTTT 59.564 34.615 12.13 0.00 40.65 1.94
229 244 6.459710 CCACTTTTTGGTTAGAGAGGTGTTTC 60.460 42.308 0.00 0.00 41.10 2.78
298 313 4.222847 CCCCGCTTAGCCCTCGTC 62.223 72.222 0.00 0.00 0.00 4.20
300 315 4.222847 CCGCTTAGCCCTCGTCCC 62.223 72.222 0.00 0.00 0.00 4.46
350 365 0.535335 GTTGAGGTATGTCTCCGGCA 59.465 55.000 0.00 0.00 33.04 5.69
351 366 0.535335 TTGAGGTATGTCTCCGGCAC 59.465 55.000 0.00 0.00 33.04 5.01
397 412 4.511826 AGCTAAGAATTAAGCCGAATTCCG 59.488 41.667 14.33 0.00 43.84 4.30
398 413 4.272748 GCTAAGAATTAAGCCGAATTCCGT 59.727 41.667 14.33 7.99 43.84 4.69
404 419 0.879090 AAGCCGAATTCCGTTGAACC 59.121 50.000 0.00 0.00 36.31 3.62
420 435 0.034186 AACCGTCCATGTGGCATGAT 60.034 50.000 10.34 0.00 34.44 2.45
423 438 1.381522 CGTCCATGTGGCATGATTCA 58.618 50.000 10.34 0.00 34.44 2.57
446 2594 1.554160 AGAGCTCAGATGGTCTGGTTG 59.446 52.381 17.77 0.63 44.39 3.77
478 2626 7.415229 ACTGTAACAAAAGGAGAAATTTCGTC 58.585 34.615 12.42 10.05 0.00 4.20
491 2639 4.468095 AATTTCGTCGAAGTGTTGGAAG 57.532 40.909 7.86 0.00 0.00 3.46
525 2673 2.158841 TGCGCGTTTATGAAAGGAGAAC 59.841 45.455 8.43 0.00 0.00 3.01
526 2674 2.475685 GCGCGTTTATGAAAGGAGAACC 60.476 50.000 8.43 0.00 0.00 3.62
556 2704 2.350772 GCATATGGTCTGCGCATTTACC 60.351 50.000 22.92 22.92 0.00 2.85
598 2746 1.146358 GACACGCGATAGGTCTTGCC 61.146 60.000 15.93 0.00 37.58 4.52
615 2763 3.715871 CCCAAACGGGCCAAATTTT 57.284 47.368 4.39 0.00 36.72 1.82
616 2764 2.841442 CCCAAACGGGCCAAATTTTA 57.159 45.000 4.39 0.00 36.72 1.52
617 2765 2.418692 CCCAAACGGGCCAAATTTTAC 58.581 47.619 4.39 0.00 36.72 2.01
618 2766 2.062519 CCAAACGGGCCAAATTTTACG 58.937 47.619 4.39 0.00 0.00 3.18
619 2767 1.457683 CAAACGGGCCAAATTTTACGC 59.542 47.619 4.39 0.00 0.00 4.42
620 2768 0.674534 AACGGGCCAAATTTTACGCA 59.325 45.000 4.39 0.00 0.00 5.24
621 2769 0.674534 ACGGGCCAAATTTTACGCAA 59.325 45.000 4.39 0.00 0.00 4.85
622 2770 1.068741 ACGGGCCAAATTTTACGCAAA 59.931 42.857 4.39 0.00 0.00 3.68
623 2771 2.135933 CGGGCCAAATTTTACGCAAAA 58.864 42.857 4.39 0.00 38.00 2.44
624 2772 2.544267 CGGGCCAAATTTTACGCAAAAA 59.456 40.909 4.39 0.00 41.21 1.94
626 2774 4.471373 GGGCCAAATTTTACGCAAAAATG 58.529 39.130 4.39 6.47 45.12 2.32
627 2775 3.911365 GGCCAAATTTTACGCAAAAATGC 59.089 39.130 0.00 8.50 45.12 3.56
628 2776 4.320129 GGCCAAATTTTACGCAAAAATGCT 60.320 37.500 0.00 0.00 45.12 3.79
629 2777 5.106908 GGCCAAATTTTACGCAAAAATGCTA 60.107 36.000 0.00 0.00 45.12 3.49
630 2778 5.788041 GCCAAATTTTACGCAAAAATGCTAC 59.212 36.000 9.17 0.00 45.12 3.58
631 2779 6.564873 GCCAAATTTTACGCAAAAATGCTACA 60.565 34.615 9.17 0.00 45.12 2.74
632 2780 6.789877 CCAAATTTTACGCAAAAATGCTACAC 59.210 34.615 9.17 0.00 45.12 2.90
633 2781 5.739237 ATTTTACGCAAAAATGCTACACG 57.261 34.783 7.95 0.00 44.36 4.49
634 2782 3.881780 TTACGCAAAAATGCTACACGT 57.118 38.095 0.00 0.00 36.17 4.49
635 2783 4.986875 TTACGCAAAAATGCTACACGTA 57.013 36.364 0.00 0.00 33.82 3.57
636 2784 3.177605 ACGCAAAAATGCTACACGTAC 57.822 42.857 0.00 0.00 0.00 3.67
637 2785 2.155024 CGCAAAAATGCTACACGTACG 58.845 47.619 15.01 15.01 0.00 3.67
638 2786 2.501881 GCAAAAATGCTACACGTACGG 58.498 47.619 21.06 11.05 0.00 4.02
639 2787 2.158058 GCAAAAATGCTACACGTACGGA 59.842 45.455 21.06 3.34 0.00 4.69
640 2788 3.181514 GCAAAAATGCTACACGTACGGAT 60.182 43.478 21.06 9.51 0.00 4.18
641 2789 4.670735 GCAAAAATGCTACACGTACGGATT 60.671 41.667 21.06 5.49 0.00 3.01
642 2790 5.387279 CAAAAATGCTACACGTACGGATTT 58.613 37.500 21.06 10.22 31.39 2.17
643 2791 4.593597 AAATGCTACACGTACGGATTTG 57.406 40.909 21.06 11.09 29.42 2.32
644 2792 2.728690 TGCTACACGTACGGATTTGT 57.271 45.000 21.06 16.45 0.00 2.83
645 2793 3.029320 TGCTACACGTACGGATTTGTT 57.971 42.857 21.06 2.65 0.00 2.83
646 2794 3.391965 TGCTACACGTACGGATTTGTTT 58.608 40.909 21.06 0.00 0.00 2.83
647 2795 3.808726 TGCTACACGTACGGATTTGTTTT 59.191 39.130 21.06 0.00 0.00 2.43
648 2796 4.987285 TGCTACACGTACGGATTTGTTTTA 59.013 37.500 21.06 0.00 0.00 1.52
649 2797 5.107530 TGCTACACGTACGGATTTGTTTTAC 60.108 40.000 21.06 5.81 0.00 2.01
650 2798 5.107530 GCTACACGTACGGATTTGTTTTACA 60.108 40.000 21.06 0.00 0.00 2.41
651 2799 5.731599 ACACGTACGGATTTGTTTTACAA 57.268 34.783 21.06 0.00 36.11 2.41
652 2800 5.740406 ACACGTACGGATTTGTTTTACAAG 58.260 37.500 21.06 0.00 39.53 3.16
653 2801 5.141568 CACGTACGGATTTGTTTTACAAGG 58.858 41.667 21.06 0.00 39.53 3.61
654 2802 5.050227 CACGTACGGATTTGTTTTACAAGGA 60.050 40.000 21.06 0.00 39.53 3.36
655 2803 5.702209 ACGTACGGATTTGTTTTACAAGGAT 59.298 36.000 21.06 0.00 39.53 3.24
656 2804 6.205270 ACGTACGGATTTGTTTTACAAGGATT 59.795 34.615 21.06 0.00 39.53 3.01
657 2805 7.079475 CGTACGGATTTGTTTTACAAGGATTT 58.921 34.615 7.57 0.00 39.53 2.17
658 2806 8.229137 CGTACGGATTTGTTTTACAAGGATTTA 58.771 33.333 7.57 0.00 39.53 1.40
659 2807 9.333497 GTACGGATTTGTTTTACAAGGATTTAC 57.667 33.333 0.00 0.00 39.53 2.01
660 2808 7.942990 ACGGATTTGTTTTACAAGGATTTACA 58.057 30.769 0.00 0.00 39.53 2.41
661 2809 8.079809 ACGGATTTGTTTTACAAGGATTTACAG 58.920 33.333 0.00 0.00 39.53 2.74
662 2810 8.293867 CGGATTTGTTTTACAAGGATTTACAGA 58.706 33.333 0.00 0.00 39.53 3.41
663 2811 9.406828 GGATTTGTTTTACAAGGATTTACAGAC 57.593 33.333 0.00 0.00 39.53 3.51
664 2812 9.406828 GATTTGTTTTACAAGGATTTACAGACC 57.593 33.333 0.00 0.00 39.53 3.85
665 2813 7.883391 TTGTTTTACAAGGATTTACAGACCA 57.117 32.000 0.00 0.00 32.34 4.02
666 2814 7.883391 TGTTTTACAAGGATTTACAGACCAA 57.117 32.000 0.00 0.00 0.00 3.67
667 2815 7.708998 TGTTTTACAAGGATTTACAGACCAAC 58.291 34.615 0.00 0.00 0.00 3.77
668 2816 6.887626 TTTACAAGGATTTACAGACCAACC 57.112 37.500 0.00 0.00 0.00 3.77
669 2817 3.763057 ACAAGGATTTACAGACCAACCC 58.237 45.455 0.00 0.00 0.00 4.11
670 2818 3.397955 ACAAGGATTTACAGACCAACCCT 59.602 43.478 0.00 0.00 0.00 4.34
671 2819 4.010349 CAAGGATTTACAGACCAACCCTC 58.990 47.826 0.00 0.00 0.00 4.30
672 2820 2.576648 AGGATTTACAGACCAACCCTCC 59.423 50.000 0.00 0.00 0.00 4.30
673 2821 2.576648 GGATTTACAGACCAACCCTCCT 59.423 50.000 0.00 0.00 0.00 3.69
674 2822 3.370633 GGATTTACAGACCAACCCTCCTC 60.371 52.174 0.00 0.00 0.00 3.71
675 2823 1.652947 TTACAGACCAACCCTCCTCC 58.347 55.000 0.00 0.00 0.00 4.30
676 2824 0.252558 TACAGACCAACCCTCCTCCC 60.253 60.000 0.00 0.00 0.00 4.30
677 2825 1.229658 CAGACCAACCCTCCTCCCT 60.230 63.158 0.00 0.00 0.00 4.20
678 2826 1.081277 AGACCAACCCTCCTCCCTC 59.919 63.158 0.00 0.00 0.00 4.30
679 2827 1.229529 GACCAACCCTCCTCCCTCA 60.230 63.158 0.00 0.00 0.00 3.86
680 2828 1.539124 ACCAACCCTCCTCCCTCAC 60.539 63.158 0.00 0.00 0.00 3.51
681 2829 1.229658 CCAACCCTCCTCCCTCACT 60.230 63.158 0.00 0.00 0.00 3.41
682 2830 0.042731 CCAACCCTCCTCCCTCACTA 59.957 60.000 0.00 0.00 0.00 2.74
683 2831 1.554822 CCAACCCTCCTCCCTCACTAA 60.555 57.143 0.00 0.00 0.00 2.24
684 2832 2.482494 CAACCCTCCTCCCTCACTAAT 58.518 52.381 0.00 0.00 0.00 1.73
685 2833 2.436173 CAACCCTCCTCCCTCACTAATC 59.564 54.545 0.00 0.00 0.00 1.75
686 2834 1.940957 ACCCTCCTCCCTCACTAATCT 59.059 52.381 0.00 0.00 0.00 2.40
687 2835 2.090999 ACCCTCCTCCCTCACTAATCTC 60.091 54.545 0.00 0.00 0.00 2.75
688 2836 2.604139 CCTCCTCCCTCACTAATCTCC 58.396 57.143 0.00 0.00 0.00 3.71
689 2837 2.178984 CCTCCTCCCTCACTAATCTCCT 59.821 54.545 0.00 0.00 0.00 3.69
690 2838 3.496331 CTCCTCCCTCACTAATCTCCTC 58.504 54.545 0.00 0.00 0.00 3.71
691 2839 2.178106 TCCTCCCTCACTAATCTCCTCC 59.822 54.545 0.00 0.00 0.00 4.30
692 2840 2.604139 CTCCCTCACTAATCTCCTCCC 58.396 57.143 0.00 0.00 0.00 4.30
693 2841 1.220750 TCCCTCACTAATCTCCTCCCC 59.779 57.143 0.00 0.00 0.00 4.81
694 2842 1.723288 CCTCACTAATCTCCTCCCCC 58.277 60.000 0.00 0.00 0.00 5.40
713 2861 1.303643 CTGAGTTTCAGGGTGGGGC 60.304 63.158 0.00 0.00 40.71 5.80
714 2862 2.035783 GAGTTTCAGGGTGGGGCC 59.964 66.667 0.00 0.00 0.00 5.80
715 2863 2.452491 AGTTTCAGGGTGGGGCCT 60.452 61.111 0.84 0.00 37.43 5.19
716 2864 2.283173 GTTTCAGGGTGGGGCCTG 60.283 66.667 0.84 0.00 37.43 4.85
717 2865 4.299796 TTTCAGGGTGGGGCCTGC 62.300 66.667 0.84 0.00 37.43 4.85
725 2873 2.372276 TGGGGCCTGCCTCATCTA 59.628 61.111 6.65 0.00 42.59 1.98
726 2874 1.307778 TGGGGCCTGCCTCATCTAA 60.308 57.895 6.65 0.00 42.59 2.10
727 2875 0.698886 TGGGGCCTGCCTCATCTAAT 60.699 55.000 6.65 0.00 42.59 1.73
728 2876 0.480252 GGGGCCTGCCTCATCTAATT 59.520 55.000 8.29 0.00 36.36 1.40
729 2877 1.705186 GGGGCCTGCCTCATCTAATTA 59.295 52.381 8.29 0.00 36.36 1.40
730 2878 2.553247 GGGGCCTGCCTCATCTAATTAC 60.553 54.545 8.29 0.00 36.36 1.89
731 2879 2.553247 GGGCCTGCCTCATCTAATTACC 60.553 54.545 8.29 0.00 36.10 2.85
732 2880 2.106511 GGCCTGCCTCATCTAATTACCA 59.893 50.000 0.00 0.00 0.00 3.25
733 2881 3.435026 GGCCTGCCTCATCTAATTACCAA 60.435 47.826 0.00 0.00 0.00 3.67
734 2882 4.401925 GCCTGCCTCATCTAATTACCAAT 58.598 43.478 0.00 0.00 0.00 3.16
735 2883 4.829492 GCCTGCCTCATCTAATTACCAATT 59.171 41.667 0.00 0.00 34.90 2.32
736 2884 6.003950 GCCTGCCTCATCTAATTACCAATTA 58.996 40.000 0.00 0.00 32.38 1.40
737 2885 6.490040 GCCTGCCTCATCTAATTACCAATTAA 59.510 38.462 0.00 0.00 33.26 1.40
738 2886 7.014230 GCCTGCCTCATCTAATTACCAATTAAA 59.986 37.037 0.00 0.00 33.26 1.52
739 2887 8.352942 CCTGCCTCATCTAATTACCAATTAAAC 58.647 37.037 0.00 0.00 33.26 2.01
740 2888 8.232913 TGCCTCATCTAATTACCAATTAAACC 57.767 34.615 0.00 0.00 33.26 3.27
741 2889 7.836685 TGCCTCATCTAATTACCAATTAAACCA 59.163 33.333 0.00 0.00 33.26 3.67
742 2890 8.352942 GCCTCATCTAATTACCAATTAAACCAG 58.647 37.037 0.00 0.00 33.26 4.00
743 2891 8.352942 CCTCATCTAATTACCAATTAAACCAGC 58.647 37.037 0.00 0.00 33.26 4.85
744 2892 8.232913 TCATCTAATTACCAATTAAACCAGCC 57.767 34.615 0.00 0.00 33.26 4.85
745 2893 7.286775 TCATCTAATTACCAATTAAACCAGCCC 59.713 37.037 0.00 0.00 33.26 5.19
746 2894 6.494952 TCTAATTACCAATTAAACCAGCCCA 58.505 36.000 0.00 0.00 33.26 5.36
747 2895 5.414789 AATTACCAATTAAACCAGCCCAC 57.585 39.130 0.00 0.00 0.00 4.61
748 2896 1.639722 ACCAATTAAACCAGCCCACC 58.360 50.000 0.00 0.00 0.00 4.61
749 2897 1.149077 ACCAATTAAACCAGCCCACCT 59.851 47.619 0.00 0.00 0.00 4.00
750 2898 1.824852 CCAATTAAACCAGCCCACCTC 59.175 52.381 0.00 0.00 0.00 3.85
751 2899 2.524306 CAATTAAACCAGCCCACCTCA 58.476 47.619 0.00 0.00 0.00 3.86
752 2900 2.493278 CAATTAAACCAGCCCACCTCAG 59.507 50.000 0.00 0.00 0.00 3.35
753 2901 0.251165 TTAAACCAGCCCACCTCAGC 60.251 55.000 0.00 0.00 0.00 4.26
754 2902 1.422977 TAAACCAGCCCACCTCAGCA 61.423 55.000 0.00 0.00 0.00 4.41
755 2903 2.085343 AAACCAGCCCACCTCAGCAT 62.085 55.000 0.00 0.00 0.00 3.79
756 2904 2.085343 AACCAGCCCACCTCAGCATT 62.085 55.000 0.00 0.00 0.00 3.56
757 2905 2.050350 CCAGCCCACCTCAGCATTG 61.050 63.158 0.00 0.00 0.00 2.82
758 2906 2.362120 AGCCCACCTCAGCATTGC 60.362 61.111 0.00 0.00 0.00 3.56
759 2907 3.455469 GCCCACCTCAGCATTGCC 61.455 66.667 4.70 0.00 0.00 4.52
760 2908 2.357836 CCCACCTCAGCATTGCCT 59.642 61.111 4.70 0.00 0.00 4.75
761 2909 2.050350 CCCACCTCAGCATTGCCTG 61.050 63.158 4.70 3.54 0.00 4.85
762 2910 1.303888 CCACCTCAGCATTGCCTGT 60.304 57.895 4.70 0.00 34.47 4.00
763 2911 0.035152 CCACCTCAGCATTGCCTGTA 60.035 55.000 4.70 0.00 34.47 2.74
764 2912 1.614051 CCACCTCAGCATTGCCTGTAA 60.614 52.381 4.70 0.00 34.47 2.41
765 2913 2.161855 CACCTCAGCATTGCCTGTAAA 58.838 47.619 4.70 0.00 34.47 2.01
766 2914 2.557924 CACCTCAGCATTGCCTGTAAAA 59.442 45.455 4.70 0.00 34.47 1.52
767 2915 2.821969 ACCTCAGCATTGCCTGTAAAAG 59.178 45.455 4.70 0.00 34.47 2.27
768 2916 2.821969 CCTCAGCATTGCCTGTAAAAGT 59.178 45.455 4.70 0.00 34.47 2.66
769 2917 3.119708 CCTCAGCATTGCCTGTAAAAGTC 60.120 47.826 4.70 0.00 34.47 3.01
770 2918 2.819608 TCAGCATTGCCTGTAAAAGTCC 59.180 45.455 4.70 0.00 34.47 3.85
771 2919 2.821969 CAGCATTGCCTGTAAAAGTCCT 59.178 45.455 4.70 0.00 0.00 3.85
772 2920 2.821969 AGCATTGCCTGTAAAAGTCCTG 59.178 45.455 4.70 0.00 0.00 3.86
773 2921 2.558359 GCATTGCCTGTAAAAGTCCTGT 59.442 45.455 0.00 0.00 0.00 4.00
774 2922 3.756434 GCATTGCCTGTAAAAGTCCTGTA 59.244 43.478 0.00 0.00 0.00 2.74
775 2923 4.217550 GCATTGCCTGTAAAAGTCCTGTAA 59.782 41.667 0.00 0.00 0.00 2.41
776 2924 5.278758 GCATTGCCTGTAAAAGTCCTGTAAA 60.279 40.000 0.00 0.00 0.00 2.01
777 2925 6.381801 CATTGCCTGTAAAAGTCCTGTAAAG 58.618 40.000 0.00 0.00 0.00 1.85
778 2926 3.818773 TGCCTGTAAAAGTCCTGTAAAGC 59.181 43.478 0.00 0.00 0.00 3.51
779 2927 3.190744 GCCTGTAAAAGTCCTGTAAAGCC 59.809 47.826 0.00 0.00 0.00 4.35
780 2928 4.652822 CCTGTAAAAGTCCTGTAAAGCCT 58.347 43.478 0.00 0.00 0.00 4.58
781 2929 4.695928 CCTGTAAAAGTCCTGTAAAGCCTC 59.304 45.833 0.00 0.00 0.00 4.70
782 2930 4.648651 TGTAAAAGTCCTGTAAAGCCTCC 58.351 43.478 0.00 0.00 0.00 4.30
783 2931 2.474410 AAAGTCCTGTAAAGCCTCCG 57.526 50.000 0.00 0.00 0.00 4.63
784 2932 1.349067 AAGTCCTGTAAAGCCTCCGT 58.651 50.000 0.00 0.00 0.00 4.69
785 2933 2.226962 AGTCCTGTAAAGCCTCCGTA 57.773 50.000 0.00 0.00 0.00 4.02
786 2934 1.823610 AGTCCTGTAAAGCCTCCGTAC 59.176 52.381 0.00 0.00 0.00 3.67
787 2935 0.813184 TCCTGTAAAGCCTCCGTACG 59.187 55.000 8.69 8.69 0.00 3.67
788 2936 0.529378 CCTGTAAAGCCTCCGTACGT 59.471 55.000 15.21 0.00 0.00 3.57
789 2937 1.468736 CCTGTAAAGCCTCCGTACGTC 60.469 57.143 15.21 0.32 0.00 4.34
790 2938 1.471684 CTGTAAAGCCTCCGTACGTCT 59.528 52.381 15.21 2.77 0.00 4.18
791 2939 2.679837 CTGTAAAGCCTCCGTACGTCTA 59.320 50.000 15.21 0.00 0.00 2.59
792 2940 2.679837 TGTAAAGCCTCCGTACGTCTAG 59.320 50.000 15.21 8.39 0.00 2.43
793 2941 0.455005 AAAGCCTCCGTACGTCTAGC 59.545 55.000 15.21 11.21 0.00 3.42
794 2942 0.679002 AAGCCTCCGTACGTCTAGCA 60.679 55.000 15.21 0.00 0.00 3.49
795 2943 0.465824 AGCCTCCGTACGTCTAGCAT 60.466 55.000 15.21 0.00 0.00 3.79
796 2944 0.384669 GCCTCCGTACGTCTAGCATT 59.615 55.000 15.21 0.00 0.00 3.56
797 2945 1.864435 GCCTCCGTACGTCTAGCATTG 60.864 57.143 15.21 0.00 0.00 2.82
798 2946 1.478137 CTCCGTACGTCTAGCATTGC 58.522 55.000 15.21 0.00 0.00 3.56
799 2947 0.101759 TCCGTACGTCTAGCATTGCC 59.898 55.000 15.21 0.00 0.00 4.52
800 2948 1.206745 CCGTACGTCTAGCATTGCCG 61.207 60.000 15.21 4.23 0.00 5.69
801 2949 0.248336 CGTACGTCTAGCATTGCCGA 60.248 55.000 7.22 0.00 0.00 5.54
809 2957 4.271687 GTCTAGCATTGCCGAATTTTACG 58.728 43.478 4.70 0.00 0.00 3.18
822 2970 4.364817 AATTTTACGTGTGACGACTTCG 57.635 40.909 0.00 0.00 46.05 3.79
957 4863 1.005037 TCCCAAGCACGTACAGCAG 60.005 57.895 9.63 2.38 0.00 4.24
958 4864 2.680913 CCCAAGCACGTACAGCAGC 61.681 63.158 9.63 0.00 0.00 5.25
959 4865 1.960763 CCAAGCACGTACAGCAGCA 60.961 57.895 9.63 0.00 0.00 4.41
960 4866 1.205064 CAAGCACGTACAGCAGCAC 59.795 57.895 9.63 0.00 0.00 4.40
961 4867 1.227527 AAGCACGTACAGCAGCACA 60.228 52.632 9.63 0.00 0.00 4.57
962 4868 0.813610 AAGCACGTACAGCAGCACAA 60.814 50.000 9.63 0.00 0.00 3.33
978 4886 2.874701 GCACAAAAGAGAGCAAGAGACA 59.125 45.455 0.00 0.00 0.00 3.41
979 4887 3.303659 GCACAAAAGAGAGCAAGAGACAC 60.304 47.826 0.00 0.00 0.00 3.67
980 4888 3.060003 CACAAAAGAGAGCAAGAGACACG 60.060 47.826 0.00 0.00 0.00 4.49
981 4889 3.126831 CAAAAGAGAGCAAGAGACACGT 58.873 45.455 0.00 0.00 0.00 4.49
1011 4919 3.041701 CACACAATGGCAGCCGTT 58.958 55.556 13.69 13.69 32.22 4.44
1043 4951 2.758737 GGAGATGGTCGTCCCGGT 60.759 66.667 0.00 0.00 35.15 5.28
1542 5456 2.436646 CGCGGCTCCACCAAAGAT 60.437 61.111 0.00 0.00 39.03 2.40
1620 5540 4.747529 GTGCCGTACGACCACCCC 62.748 72.222 18.76 0.00 0.00 4.95
1949 5872 0.683412 GTGTCTAACCCGGTGGACTT 59.317 55.000 18.77 0.00 34.81 3.01
1953 5876 0.036306 CTAACCCGGTGGACTTTGCT 59.964 55.000 0.00 0.00 34.81 3.91
1962 5885 4.451652 GACTTTGCTGCTCGGCGC 62.452 66.667 0.00 0.00 39.77 6.53
2388 6563 7.904558 TGAGAGAGAATGGATTGTATAGTGT 57.095 36.000 0.00 0.00 0.00 3.55
2503 6687 3.244249 ACCGTTGGGAGAGAAAGAAAGAG 60.244 47.826 0.00 0.00 36.97 2.85
2511 6695 5.045213 GGGAGAGAAAGAAAGAGGGAGAAAT 60.045 44.000 0.00 0.00 0.00 2.17
2514 6698 8.103935 GGAGAGAAAGAAAGAGGGAGAAATAAA 58.896 37.037 0.00 0.00 0.00 1.40
2517 6701 9.679661 GAGAAAGAAAGAGGGAGAAATAAAGAT 57.320 33.333 0.00 0.00 0.00 2.40
2520 6704 9.987726 AAAGAAAGAGGGAGAAATAAAGATCAT 57.012 29.630 0.00 0.00 0.00 2.45
2566 6750 6.642683 ACTTATTAGTCAATGTGTACGTGC 57.357 37.500 0.00 0.00 0.00 5.34
2567 6751 6.160684 ACTTATTAGTCAATGTGTACGTGCA 58.839 36.000 0.82 0.82 0.00 4.57
2568 6752 6.647481 ACTTATTAGTCAATGTGTACGTGCAA 59.353 34.615 8.25 0.00 0.00 4.08
2569 6753 7.333423 ACTTATTAGTCAATGTGTACGTGCAAT 59.667 33.333 8.25 1.77 0.00 3.56
2570 6754 3.811722 AGTCAATGTGTACGTGCAATG 57.188 42.857 8.25 8.35 0.00 2.82
2571 6755 2.095768 AGTCAATGTGTACGTGCAATGC 60.096 45.455 8.25 0.00 0.00 3.56
2572 6756 1.876156 TCAATGTGTACGTGCAATGCA 59.124 42.857 8.25 2.72 35.60 3.96
2586 6770 5.573296 TGCAATGCACGTTAATTTCAAAG 57.427 34.783 2.72 0.00 31.71 2.77
2587 6771 5.046529 TGCAATGCACGTTAATTTCAAAGT 58.953 33.333 2.72 0.00 31.71 2.66
2588 6772 6.209361 TGCAATGCACGTTAATTTCAAAGTA 58.791 32.000 2.72 0.00 31.71 2.24
2589 6773 6.865726 TGCAATGCACGTTAATTTCAAAGTAT 59.134 30.769 2.72 0.00 31.71 2.12
2590 6774 8.023706 TGCAATGCACGTTAATTTCAAAGTATA 58.976 29.630 2.72 0.00 31.71 1.47
2591 6775 9.019764 GCAATGCACGTTAATTTCAAAGTATAT 57.980 29.630 0.00 0.00 0.00 0.86
2603 6787 8.786937 ATTTCAAAGTATATTAAGTGCATGCG 57.213 30.769 14.09 0.00 0.00 4.73
2604 6788 6.299023 TCAAAGTATATTAAGTGCATGCGG 57.701 37.500 14.09 0.00 0.00 5.69
2605 6789 6.052360 TCAAAGTATATTAAGTGCATGCGGA 58.948 36.000 14.09 0.00 0.00 5.54
2606 6790 6.710295 TCAAAGTATATTAAGTGCATGCGGAT 59.290 34.615 14.09 3.59 0.00 4.18
2607 6791 7.875554 TCAAAGTATATTAAGTGCATGCGGATA 59.124 33.333 14.09 6.94 0.00 2.59
2608 6792 8.668353 CAAAGTATATTAAGTGCATGCGGATAT 58.332 33.333 14.09 13.06 0.00 1.63
2609 6793 8.792830 AAGTATATTAAGTGCATGCGGATATT 57.207 30.769 14.09 5.62 0.00 1.28
2610 6794 9.884636 AAGTATATTAAGTGCATGCGGATATTA 57.115 29.630 14.09 4.65 0.00 0.98
2611 6795 9.884636 AGTATATTAAGTGCATGCGGATATTAA 57.115 29.630 14.09 12.83 0.00 1.40
2613 6797 8.792830 ATATTAAGTGCATGCGGATATTAAGT 57.207 30.769 14.09 4.58 0.00 2.24
2614 6798 9.884636 ATATTAAGTGCATGCGGATATTAAGTA 57.115 29.630 14.09 8.17 0.00 2.24
2615 6799 7.652300 TTAAGTGCATGCGGATATTAAGTAG 57.348 36.000 14.09 0.00 0.00 2.57
2616 6800 4.569943 AGTGCATGCGGATATTAAGTAGG 58.430 43.478 14.09 0.00 0.00 3.18
2617 6801 4.283467 AGTGCATGCGGATATTAAGTAGGA 59.717 41.667 14.09 0.00 0.00 2.94
2618 6802 5.046304 AGTGCATGCGGATATTAAGTAGGAT 60.046 40.000 14.09 0.00 0.00 3.24
2619 6803 6.154534 AGTGCATGCGGATATTAAGTAGGATA 59.845 38.462 14.09 0.00 0.00 2.59
2620 6804 6.986817 GTGCATGCGGATATTAAGTAGGATAT 59.013 38.462 14.09 0.00 0.00 1.63
2621 6805 7.495934 GTGCATGCGGATATTAAGTAGGATATT 59.504 37.037 14.09 0.00 0.00 1.28
2622 6806 8.700973 TGCATGCGGATATTAAGTAGGATATTA 58.299 33.333 14.09 0.00 0.00 0.98
2623 6807 9.712305 GCATGCGGATATTAAGTAGGATATTAT 57.288 33.333 0.00 0.00 0.00 1.28
2675 6859 5.527511 TTTGGCATGAAATTAATTGCACG 57.472 34.783 11.20 4.34 36.82 5.34
2676 6860 2.928757 TGGCATGAAATTAATTGCACGC 59.071 40.909 17.18 17.18 33.92 5.34
2677 6861 3.189285 GGCATGAAATTAATTGCACGCT 58.811 40.909 22.83 1.49 35.02 5.07
2678 6862 4.142293 TGGCATGAAATTAATTGCACGCTA 60.142 37.500 22.83 16.47 35.02 4.26
2679 6863 4.803088 GGCATGAAATTAATTGCACGCTAA 59.197 37.500 22.83 0.00 35.02 3.09
2680 6864 5.290643 GGCATGAAATTAATTGCACGCTAAA 59.709 36.000 22.83 0.00 35.02 1.85
2681 6865 6.177822 GCATGAAATTAATTGCACGCTAAAC 58.822 36.000 17.97 0.00 32.06 2.01
2692 6876 4.417240 GCTAAACGTGTTGAGCGC 57.583 55.556 6.34 0.00 37.32 5.92
2693 6877 1.860078 GCTAAACGTGTTGAGCGCT 59.140 52.632 11.27 11.27 37.32 5.92
2694 6878 0.179248 GCTAAACGTGTTGAGCGCTC 60.179 55.000 30.42 30.42 37.32 5.03
2695 6879 0.091344 CTAAACGTGTTGAGCGCTCG 59.909 55.000 30.75 21.89 0.00 5.03
2696 6880 0.318022 TAAACGTGTTGAGCGCTCGA 60.318 50.000 30.75 27.40 0.00 4.04
2697 6881 1.818221 AAACGTGTTGAGCGCTCGAC 61.818 55.000 39.44 39.44 42.86 4.20
2700 6884 4.673403 TGTTGAGCGCTCGACATT 57.327 50.000 42.95 9.77 46.09 2.71
2701 6885 2.153039 TGTTGAGCGCTCGACATTG 58.847 52.632 42.95 0.00 46.09 2.82
2702 6886 0.319469 TGTTGAGCGCTCGACATTGA 60.319 50.000 42.95 27.81 46.09 2.57
2703 6887 0.790207 GTTGAGCGCTCGACATTGAA 59.210 50.000 40.41 22.88 42.27 2.69
2704 6888 1.194547 GTTGAGCGCTCGACATTGAAA 59.805 47.619 40.41 22.22 42.27 2.69
2705 6889 0.790207 TGAGCGCTCGACATTGAAAC 59.210 50.000 30.75 5.13 0.00 2.78
2706 6890 0.790207 GAGCGCTCGACATTGAAACA 59.210 50.000 23.61 0.00 0.00 2.83
2707 6891 0.792640 AGCGCTCGACATTGAAACAG 59.207 50.000 2.64 0.00 0.00 3.16
2708 6892 0.512952 GCGCTCGACATTGAAACAGT 59.487 50.000 0.00 0.00 0.00 3.55
2709 6893 1.462541 GCGCTCGACATTGAAACAGTC 60.463 52.381 0.00 0.00 0.00 3.51
2710 6894 2.061773 CGCTCGACATTGAAACAGTCT 58.938 47.619 0.00 0.00 0.00 3.24
2711 6895 3.242518 CGCTCGACATTGAAACAGTCTA 58.757 45.455 0.00 0.00 0.00 2.59
2712 6896 3.301906 CGCTCGACATTGAAACAGTCTAG 59.698 47.826 0.00 0.00 0.00 2.43
2713 6897 3.614616 GCTCGACATTGAAACAGTCTAGG 59.385 47.826 0.00 0.00 0.00 3.02
2714 6898 4.810790 CTCGACATTGAAACAGTCTAGGT 58.189 43.478 0.00 0.00 0.00 3.08
2715 6899 4.806330 TCGACATTGAAACAGTCTAGGTC 58.194 43.478 0.00 0.00 38.76 3.85
2717 6901 4.557205 GACATTGAAACAGTCTAGGTCGT 58.443 43.478 0.00 0.00 34.13 4.34
2718 6902 4.957296 ACATTGAAACAGTCTAGGTCGTT 58.043 39.130 0.00 0.00 0.00 3.85
2719 6903 4.750098 ACATTGAAACAGTCTAGGTCGTTG 59.250 41.667 0.00 0.00 0.00 4.10
2720 6904 3.380479 TGAAACAGTCTAGGTCGTTGG 57.620 47.619 0.00 0.00 0.00 3.77
2721 6905 2.960384 TGAAACAGTCTAGGTCGTTGGA 59.040 45.455 0.00 0.00 0.00 3.53
2722 6906 3.576982 TGAAACAGTCTAGGTCGTTGGAT 59.423 43.478 0.00 0.00 0.00 3.41
2723 6907 4.039973 TGAAACAGTCTAGGTCGTTGGATT 59.960 41.667 0.00 0.00 0.00 3.01
2724 6908 3.594603 ACAGTCTAGGTCGTTGGATTG 57.405 47.619 0.00 0.00 0.00 2.67
2725 6909 3.162666 ACAGTCTAGGTCGTTGGATTGA 58.837 45.455 0.00 0.00 0.00 2.57
2726 6910 3.056749 ACAGTCTAGGTCGTTGGATTGAC 60.057 47.826 0.00 0.00 0.00 3.18
2727 6911 3.056821 CAGTCTAGGTCGTTGGATTGACA 60.057 47.826 0.00 0.00 36.83 3.58
2728 6912 3.769844 AGTCTAGGTCGTTGGATTGACAT 59.230 43.478 0.00 0.00 36.83 3.06
2729 6913 3.865745 GTCTAGGTCGTTGGATTGACATG 59.134 47.826 0.00 0.00 36.83 3.21
2730 6914 3.767131 TCTAGGTCGTTGGATTGACATGA 59.233 43.478 0.00 0.00 36.83 3.07
2731 6915 3.634397 AGGTCGTTGGATTGACATGAT 57.366 42.857 0.00 0.00 36.83 2.45
2732 6916 3.955471 AGGTCGTTGGATTGACATGATT 58.045 40.909 0.00 0.00 36.83 2.57
2733 6917 4.335416 AGGTCGTTGGATTGACATGATTT 58.665 39.130 0.00 0.00 36.83 2.17
2734 6918 4.156556 AGGTCGTTGGATTGACATGATTTG 59.843 41.667 0.00 0.00 36.83 2.32
2735 6919 4.155826 GGTCGTTGGATTGACATGATTTGA 59.844 41.667 0.00 0.00 36.83 2.69
2736 6920 5.163622 GGTCGTTGGATTGACATGATTTGAT 60.164 40.000 0.00 0.00 36.83 2.57
2737 6921 6.038161 GGTCGTTGGATTGACATGATTTGATA 59.962 38.462 0.00 0.00 36.83 2.15
2738 6922 7.128331 GTCGTTGGATTGACATGATTTGATAG 58.872 38.462 0.00 0.00 35.20 2.08
2739 6923 5.911280 CGTTGGATTGACATGATTTGATAGC 59.089 40.000 0.00 0.00 0.00 2.97
2740 6924 6.211515 GTTGGATTGACATGATTTGATAGCC 58.788 40.000 0.00 0.00 0.00 3.93
2741 6925 4.516321 TGGATTGACATGATTTGATAGCCG 59.484 41.667 0.00 0.00 0.00 5.52
2742 6926 4.756642 GGATTGACATGATTTGATAGCCGA 59.243 41.667 0.00 0.00 0.00 5.54
2743 6927 5.106791 GGATTGACATGATTTGATAGCCGAG 60.107 44.000 0.00 0.00 0.00 4.63
2744 6928 4.670896 TGACATGATTTGATAGCCGAGA 57.329 40.909 0.00 0.00 0.00 4.04
2745 6929 5.219343 TGACATGATTTGATAGCCGAGAT 57.781 39.130 0.00 0.00 0.00 2.75
2746 6930 5.614308 TGACATGATTTGATAGCCGAGATT 58.386 37.500 0.00 0.00 0.00 2.40
2747 6931 6.758254 TGACATGATTTGATAGCCGAGATTA 58.242 36.000 0.00 0.00 0.00 1.75
2748 6932 7.216494 TGACATGATTTGATAGCCGAGATTAA 58.784 34.615 0.00 0.00 0.00 1.40
2749 6933 7.879677 TGACATGATTTGATAGCCGAGATTAAT 59.120 33.333 0.00 0.00 0.00 1.40
2750 6934 8.627208 ACATGATTTGATAGCCGAGATTAATT 57.373 30.769 0.00 0.00 0.00 1.40
2751 6935 8.509690 ACATGATTTGATAGCCGAGATTAATTG 58.490 33.333 0.00 0.00 0.00 2.32
2752 6936 7.439157 TGATTTGATAGCCGAGATTAATTGG 57.561 36.000 0.00 0.00 0.00 3.16
2753 6937 7.223584 TGATTTGATAGCCGAGATTAATTGGA 58.776 34.615 6.53 0.00 0.00 3.53
2754 6938 7.884877 TGATTTGATAGCCGAGATTAATTGGAT 59.115 33.333 6.53 3.24 0.00 3.41
2755 6939 7.672983 TTTGATAGCCGAGATTAATTGGATC 57.327 36.000 6.53 0.00 0.00 3.36
2756 6940 6.611613 TGATAGCCGAGATTAATTGGATCT 57.388 37.500 6.01 6.01 36.60 2.75
2757 6941 6.401394 TGATAGCCGAGATTAATTGGATCTG 58.599 40.000 9.96 4.52 34.13 2.90
2758 6942 3.406764 AGCCGAGATTAATTGGATCTGC 58.593 45.455 9.96 8.52 34.13 4.26
2759 6943 2.485814 GCCGAGATTAATTGGATCTGCC 59.514 50.000 9.96 0.00 34.13 4.85
2760 6944 3.077359 CCGAGATTAATTGGATCTGCCC 58.923 50.000 9.96 0.00 34.13 5.36
2761 6945 3.077359 CGAGATTAATTGGATCTGCCCC 58.923 50.000 9.96 0.00 34.13 5.80
2762 6946 3.244700 CGAGATTAATTGGATCTGCCCCT 60.245 47.826 9.96 0.00 34.13 4.79
2763 6947 4.734266 GAGATTAATTGGATCTGCCCCTT 58.266 43.478 9.96 0.00 34.13 3.95
2764 6948 5.143369 GAGATTAATTGGATCTGCCCCTTT 58.857 41.667 9.96 0.00 34.13 3.11
2765 6949 4.897670 AGATTAATTGGATCTGCCCCTTTG 59.102 41.667 5.62 0.00 32.79 2.77
2766 6950 1.870064 AATTGGATCTGCCCCTTTGG 58.130 50.000 0.00 0.00 34.97 3.28
2900 7084 6.654161 CCAATTTCCATTAAAGAAACCATGCA 59.346 34.615 6.26 0.00 36.13 3.96
2904 7088 6.418057 TCCATTAAAGAAACCATGCAGTTT 57.582 33.333 3.90 3.90 42.56 2.66
2907 7091 6.147656 CCATTAAAGAAACCATGCAGTTTTCC 59.852 38.462 5.64 0.00 40.01 3.13
2913 7097 6.012745 AGAAACCATGCAGTTTTCCTAAGAT 58.987 36.000 5.64 0.00 40.01 2.40
2931 7115 4.732285 AGATCAAACTACTGCACAAACG 57.268 40.909 0.00 0.00 0.00 3.60
2935 7119 5.798015 TCAAACTACTGCACAAACGTAAA 57.202 34.783 0.00 0.00 0.00 2.01
2938 7122 5.548706 AACTACTGCACAAACGTAAACAA 57.451 34.783 0.00 0.00 0.00 2.83
2967 7151 1.218316 GAGACTACCACAAGGCCCG 59.782 63.158 0.00 0.00 39.06 6.13
2968 7152 1.229082 AGACTACCACAAGGCCCGA 60.229 57.895 0.00 0.00 39.06 5.14
2977 7163 0.893727 ACAAGGCCCGACCAAACATC 60.894 55.000 0.00 0.00 43.14 3.06
2983 7169 1.586154 CCCGACCAAACATCTGCCAC 61.586 60.000 0.00 0.00 0.00 5.01
3024 7210 2.106511 CCCAGAGGAACAAAAGTGGAGA 59.893 50.000 0.00 0.00 33.47 3.71
3059 7245 4.327357 CGCTAGACCAAGTTCAACATAGTG 59.673 45.833 0.00 0.00 0.00 2.74
3109 7295 1.465777 TGAGAATGCAGCAACATGACG 59.534 47.619 0.00 0.00 0.00 4.35
3113 7299 2.336554 ATGCAGCAACATGACGAAAC 57.663 45.000 0.00 0.00 0.00 2.78
3115 7301 1.403323 TGCAGCAACATGACGAAACAA 59.597 42.857 0.00 0.00 0.00 2.83
3126 7312 2.744741 TGACGAAACAAACAGCTTCACA 59.255 40.909 0.00 0.00 0.00 3.58
3140 7326 5.188555 ACAGCTTCACAGGATCATCTTCTTA 59.811 40.000 0.00 0.00 0.00 2.10
3141 7327 6.126825 ACAGCTTCACAGGATCATCTTCTTAT 60.127 38.462 0.00 0.00 0.00 1.73
3159 7345 7.931407 TCTTCTTATCTTTTGTTCACTACAGCA 59.069 33.333 0.00 0.00 38.19 4.41
3174 7360 1.935933 CAGCATGTAGACCCCGTTAC 58.064 55.000 0.00 0.00 0.00 2.50
3212 7398 4.624125 GCCCTGTAAATCTCACTTGCTACT 60.624 45.833 0.00 0.00 0.00 2.57
3213 7399 5.491982 CCCTGTAAATCTCACTTGCTACTT 58.508 41.667 0.00 0.00 0.00 2.24
3214 7400 5.352569 CCCTGTAAATCTCACTTGCTACTTG 59.647 44.000 0.00 0.00 0.00 3.16
3215 7401 5.163814 CCTGTAAATCTCACTTGCTACTTGC 60.164 44.000 0.00 0.00 43.25 4.01
3216 7402 5.551233 TGTAAATCTCACTTGCTACTTGCT 58.449 37.500 0.00 0.00 43.37 3.91
3217 7403 5.997746 TGTAAATCTCACTTGCTACTTGCTT 59.002 36.000 0.00 0.00 43.37 3.91
3218 7404 7.158697 TGTAAATCTCACTTGCTACTTGCTTA 58.841 34.615 0.00 0.00 43.37 3.09
3219 7405 7.659799 TGTAAATCTCACTTGCTACTTGCTTAA 59.340 33.333 0.00 0.00 43.37 1.85
3220 7406 6.734104 AATCTCACTTGCTACTTGCTTAAG 57.266 37.500 0.00 0.00 43.37 1.85
3221 7407 5.468540 TCTCACTTGCTACTTGCTTAAGA 57.531 39.130 6.67 0.00 43.37 2.10
3222 7408 5.853936 TCTCACTTGCTACTTGCTTAAGAA 58.146 37.500 6.67 0.00 43.37 2.52
3223 7409 5.928839 TCTCACTTGCTACTTGCTTAAGAAG 59.071 40.000 6.67 9.50 43.37 2.85
3224 7410 5.611374 TCACTTGCTACTTGCTTAAGAAGT 58.389 37.500 18.20 18.20 43.37 3.01
3225 7411 5.696724 TCACTTGCTACTTGCTTAAGAAGTC 59.303 40.000 17.86 9.73 43.37 3.01
3226 7412 5.698545 CACTTGCTACTTGCTTAAGAAGTCT 59.301 40.000 17.86 4.39 43.37 3.24
3227 7413 6.203723 CACTTGCTACTTGCTTAAGAAGTCTT 59.796 38.462 17.86 0.00 43.37 3.01
3228 7414 6.203723 ACTTGCTACTTGCTTAAGAAGTCTTG 59.796 38.462 17.86 12.78 43.37 3.02
3229 7415 4.452455 TGCTACTTGCTTAAGAAGTCTTGC 59.548 41.667 17.86 18.51 43.37 4.01
3230 7416 4.142795 GCTACTTGCTTAAGAAGTCTTGCC 60.143 45.833 17.86 5.92 36.74 4.52
3231 7417 3.149981 ACTTGCTTAAGAAGTCTTGCCC 58.850 45.455 6.67 0.00 37.40 5.36
3232 7418 2.200373 TGCTTAAGAAGTCTTGCCCC 57.800 50.000 6.67 0.00 37.40 5.80
3233 7419 1.271926 TGCTTAAGAAGTCTTGCCCCC 60.272 52.381 6.67 0.00 37.40 5.40
3234 7420 1.271926 GCTTAAGAAGTCTTGCCCCCA 60.272 52.381 6.67 0.00 37.40 4.96
3235 7421 2.437413 CTTAAGAAGTCTTGCCCCCAC 58.563 52.381 0.00 0.00 37.40 4.61
3236 7422 0.696501 TAAGAAGTCTTGCCCCCACC 59.303 55.000 3.76 0.00 37.40 4.61
3237 7423 1.360393 AAGAAGTCTTGCCCCCACCA 61.360 55.000 0.00 0.00 34.38 4.17
3238 7424 1.142688 AGAAGTCTTGCCCCCACCAT 61.143 55.000 0.00 0.00 0.00 3.55
3239 7425 0.681243 GAAGTCTTGCCCCCACCATC 60.681 60.000 0.00 0.00 0.00 3.51
3240 7426 1.434513 AAGTCTTGCCCCCACCATCA 61.435 55.000 0.00 0.00 0.00 3.07
3241 7427 1.217057 AGTCTTGCCCCCACCATCAT 61.217 55.000 0.00 0.00 0.00 2.45
3242 7428 0.324645 GTCTTGCCCCCACCATCATT 60.325 55.000 0.00 0.00 0.00 2.57
3243 7429 0.324552 TCTTGCCCCCACCATCATTG 60.325 55.000 0.00 0.00 0.00 2.82
3244 7430 1.963464 CTTGCCCCCACCATCATTGC 61.963 60.000 0.00 0.00 0.00 3.56
3245 7431 3.156556 GCCCCCACCATCATTGCC 61.157 66.667 0.00 0.00 0.00 4.52
3246 7432 2.691732 CCCCCACCATCATTGCCT 59.308 61.111 0.00 0.00 0.00 4.75
3247 7433 1.456331 CCCCCACCATCATTGCCTC 60.456 63.158 0.00 0.00 0.00 4.70
3248 7434 1.616921 CCCCACCATCATTGCCTCT 59.383 57.895 0.00 0.00 0.00 3.69
3249 7435 0.466922 CCCCACCATCATTGCCTCTC 60.467 60.000 0.00 0.00 0.00 3.20
3250 7436 0.549950 CCCACCATCATTGCCTCTCT 59.450 55.000 0.00 0.00 0.00 3.10
3251 7437 1.064166 CCCACCATCATTGCCTCTCTT 60.064 52.381 0.00 0.00 0.00 2.85
3252 7438 2.622452 CCCACCATCATTGCCTCTCTTT 60.622 50.000 0.00 0.00 0.00 2.52
3253 7439 3.094572 CCACCATCATTGCCTCTCTTTT 58.905 45.455 0.00 0.00 0.00 2.27
3254 7440 3.512724 CCACCATCATTGCCTCTCTTTTT 59.487 43.478 0.00 0.00 0.00 1.94
3276 7462 4.952262 TTCTCCTTGATCTGCAAAATCG 57.048 40.909 0.00 0.00 35.74 3.34
3277 7463 4.206477 TCTCCTTGATCTGCAAAATCGA 57.794 40.909 0.00 0.00 35.74 3.59
3278 7464 3.935203 TCTCCTTGATCTGCAAAATCGAC 59.065 43.478 0.00 0.00 35.74 4.20
3279 7465 3.009723 TCCTTGATCTGCAAAATCGACC 58.990 45.455 0.00 0.00 35.74 4.79
3280 7466 2.749076 CCTTGATCTGCAAAATCGACCA 59.251 45.455 0.00 0.00 35.74 4.02
3281 7467 3.191162 CCTTGATCTGCAAAATCGACCAA 59.809 43.478 0.00 0.00 35.74 3.67
3282 7468 3.829886 TGATCTGCAAAATCGACCAAC 57.170 42.857 0.00 0.00 0.00 3.77
3283 7469 2.487762 TGATCTGCAAAATCGACCAACC 59.512 45.455 0.00 0.00 0.00 3.77
3284 7470 1.243902 TCTGCAAAATCGACCAACCC 58.756 50.000 0.00 0.00 0.00 4.11
3285 7471 0.958091 CTGCAAAATCGACCAACCCA 59.042 50.000 0.00 0.00 0.00 4.51
3286 7472 0.671251 TGCAAAATCGACCAACCCAC 59.329 50.000 0.00 0.00 0.00 4.61
3287 7473 0.386731 GCAAAATCGACCAACCCACG 60.387 55.000 0.00 0.00 0.00 4.94
3288 7474 1.231221 CAAAATCGACCAACCCACGA 58.769 50.000 0.00 0.00 40.18 4.35
3289 7475 1.810151 CAAAATCGACCAACCCACGAT 59.190 47.619 0.00 0.00 46.26 3.73
3290 7476 1.734163 AAATCGACCAACCCACGATC 58.266 50.000 0.00 0.00 44.13 3.69
3291 7477 0.107848 AATCGACCAACCCACGATCC 60.108 55.000 0.00 0.00 44.13 3.36
3292 7478 1.261938 ATCGACCAACCCACGATCCA 61.262 55.000 0.00 0.00 41.80 3.41
3293 7479 1.004320 CGACCAACCCACGATCCAA 60.004 57.895 0.00 0.00 0.00 3.53
3294 7480 0.392461 CGACCAACCCACGATCCAAT 60.392 55.000 0.00 0.00 0.00 3.16
3295 7481 1.134640 CGACCAACCCACGATCCAATA 60.135 52.381 0.00 0.00 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 119 4.180817 GGCAACAAACACTGCTTAGTTTT 58.819 39.130 0.00 0.00 38.65 2.43
212 226 5.017490 CCTCTAGAAACACCTCTCTAACCA 58.983 45.833 0.00 0.00 0.00 3.67
298 313 0.676466 TTGCTAGACACAATGCCGGG 60.676 55.000 2.18 0.00 0.00 5.73
300 315 0.095245 CGTTGCTAGACACAATGCCG 59.905 55.000 0.00 0.00 0.00 5.69
350 365 2.002586 CGACCGAATTCTGCAAGATGT 58.997 47.619 3.52 0.00 46.36 3.06
351 366 1.328680 CCGACCGAATTCTGCAAGATG 59.671 52.381 3.52 0.00 46.36 2.90
387 402 1.133869 CGGTTCAACGGAATTCGGC 59.866 57.895 12.54 0.00 44.45 5.54
397 412 1.169661 TGCCACATGGACGGTTCAAC 61.170 55.000 0.87 0.00 37.39 3.18
398 413 0.251121 ATGCCACATGGACGGTTCAA 60.251 50.000 0.87 0.00 37.39 2.69
404 419 1.381522 TGAATCATGCCACATGGACG 58.618 50.000 0.87 0.00 37.39 4.79
478 2626 3.138304 TGATTCACCTTCCAACACTTCG 58.862 45.455 0.00 0.00 0.00 3.79
491 2639 2.870372 GCGCACACCTGATTCACC 59.130 61.111 0.30 0.00 0.00 4.02
556 2704 7.339212 TGTCCATATTCTTATTGACCCACTTTG 59.661 37.037 0.00 0.00 32.20 2.77
598 2746 2.062519 CGTAAAATTTGGCCCGTTTGG 58.937 47.619 0.00 0.00 37.09 3.28
606 2754 4.782156 AGCATTTTTGCGTAAAATTTGGC 58.218 34.783 12.26 12.57 42.40 4.52
608 2756 6.511308 CGTGTAGCATTTTTGCGTAAAATTTG 59.489 34.615 12.26 13.27 42.40 2.32
610 2758 5.688176 ACGTGTAGCATTTTTGCGTAAAATT 59.312 32.000 12.26 6.29 42.40 1.82
611 2759 5.216648 ACGTGTAGCATTTTTGCGTAAAAT 58.783 33.333 12.26 8.16 45.14 1.82
612 2760 4.599047 ACGTGTAGCATTTTTGCGTAAAA 58.401 34.783 7.36 7.36 39.88 1.52
613 2761 4.212213 ACGTGTAGCATTTTTGCGTAAA 57.788 36.364 0.00 0.00 40.27 2.01
614 2762 3.881780 ACGTGTAGCATTTTTGCGTAA 57.118 38.095 0.00 0.00 40.27 3.18
615 2763 3.181542 CGTACGTGTAGCATTTTTGCGTA 60.182 43.478 7.22 0.00 40.27 4.42
616 2764 2.410517 CGTACGTGTAGCATTTTTGCGT 60.411 45.455 7.22 0.00 40.27 5.24
617 2765 2.155024 CGTACGTGTAGCATTTTTGCG 58.845 47.619 7.22 0.00 40.27 4.85
618 2766 2.158058 TCCGTACGTGTAGCATTTTTGC 59.842 45.455 15.21 0.00 0.00 3.68
619 2767 4.593597 ATCCGTACGTGTAGCATTTTTG 57.406 40.909 15.21 0.00 0.00 2.44
620 2768 5.049267 ACAAATCCGTACGTGTAGCATTTTT 60.049 36.000 15.21 0.00 0.00 1.94
621 2769 4.453136 ACAAATCCGTACGTGTAGCATTTT 59.547 37.500 15.21 0.00 0.00 1.82
622 2770 3.998341 ACAAATCCGTACGTGTAGCATTT 59.002 39.130 15.21 5.78 0.00 2.32
623 2771 3.592059 ACAAATCCGTACGTGTAGCATT 58.408 40.909 15.21 0.00 0.00 3.56
624 2772 3.241067 ACAAATCCGTACGTGTAGCAT 57.759 42.857 15.21 0.00 0.00 3.79
625 2773 2.728690 ACAAATCCGTACGTGTAGCA 57.271 45.000 15.21 0.00 0.00 3.49
626 2774 4.394099 AAAACAAATCCGTACGTGTAGC 57.606 40.909 15.21 0.00 0.00 3.58
627 2775 6.450845 TGTAAAACAAATCCGTACGTGTAG 57.549 37.500 15.21 0.00 0.00 2.74
628 2776 6.073873 CCTTGTAAAACAAATCCGTACGTGTA 60.074 38.462 15.21 0.00 37.69 2.90
629 2777 5.277442 CCTTGTAAAACAAATCCGTACGTGT 60.277 40.000 15.21 8.98 37.69 4.49
630 2778 5.050227 TCCTTGTAAAACAAATCCGTACGTG 60.050 40.000 15.21 8.29 37.69 4.49
631 2779 5.055812 TCCTTGTAAAACAAATCCGTACGT 58.944 37.500 15.21 0.00 37.69 3.57
632 2780 5.594724 TCCTTGTAAAACAAATCCGTACG 57.405 39.130 8.69 8.69 37.69 3.67
633 2781 9.333497 GTAAATCCTTGTAAAACAAATCCGTAC 57.667 33.333 0.00 0.00 37.69 3.67
634 2782 9.064706 TGTAAATCCTTGTAAAACAAATCCGTA 57.935 29.630 0.00 0.00 37.69 4.02
635 2783 7.942990 TGTAAATCCTTGTAAAACAAATCCGT 58.057 30.769 0.00 0.00 37.69 4.69
636 2784 8.293867 TCTGTAAATCCTTGTAAAACAAATCCG 58.706 33.333 0.00 0.00 37.69 4.18
637 2785 9.406828 GTCTGTAAATCCTTGTAAAACAAATCC 57.593 33.333 0.00 0.00 37.69 3.01
638 2786 9.406828 GGTCTGTAAATCCTTGTAAAACAAATC 57.593 33.333 0.00 0.00 37.69 2.17
639 2787 8.919145 TGGTCTGTAAATCCTTGTAAAACAAAT 58.081 29.630 0.00 0.00 37.69 2.32
640 2788 8.294954 TGGTCTGTAAATCCTTGTAAAACAAA 57.705 30.769 0.00 0.00 37.69 2.83
641 2789 7.883391 TGGTCTGTAAATCCTTGTAAAACAA 57.117 32.000 0.00 0.00 36.54 2.83
642 2790 7.201839 GGTTGGTCTGTAAATCCTTGTAAAACA 60.202 37.037 0.00 0.00 0.00 2.83
643 2791 7.143340 GGTTGGTCTGTAAATCCTTGTAAAAC 58.857 38.462 0.00 0.00 0.00 2.43
644 2792 6.265876 GGGTTGGTCTGTAAATCCTTGTAAAA 59.734 38.462 0.00 0.00 0.00 1.52
645 2793 5.771165 GGGTTGGTCTGTAAATCCTTGTAAA 59.229 40.000 0.00 0.00 0.00 2.01
646 2794 5.073965 AGGGTTGGTCTGTAAATCCTTGTAA 59.926 40.000 0.00 0.00 0.00 2.41
647 2795 4.600111 AGGGTTGGTCTGTAAATCCTTGTA 59.400 41.667 0.00 0.00 0.00 2.41
648 2796 3.397955 AGGGTTGGTCTGTAAATCCTTGT 59.602 43.478 0.00 0.00 0.00 3.16
649 2797 4.010349 GAGGGTTGGTCTGTAAATCCTTG 58.990 47.826 0.00 0.00 0.00 3.61
650 2798 3.010250 GGAGGGTTGGTCTGTAAATCCTT 59.990 47.826 0.00 0.00 0.00 3.36
651 2799 2.576648 GGAGGGTTGGTCTGTAAATCCT 59.423 50.000 0.00 0.00 0.00 3.24
652 2800 2.576648 AGGAGGGTTGGTCTGTAAATCC 59.423 50.000 0.00 0.00 0.00 3.01
653 2801 3.370633 GGAGGAGGGTTGGTCTGTAAATC 60.371 52.174 0.00 0.00 0.00 2.17
654 2802 2.576648 GGAGGAGGGTTGGTCTGTAAAT 59.423 50.000 0.00 0.00 0.00 1.40
655 2803 1.982958 GGAGGAGGGTTGGTCTGTAAA 59.017 52.381 0.00 0.00 0.00 2.01
656 2804 1.652947 GGAGGAGGGTTGGTCTGTAA 58.347 55.000 0.00 0.00 0.00 2.41
657 2805 0.252558 GGGAGGAGGGTTGGTCTGTA 60.253 60.000 0.00 0.00 0.00 2.74
658 2806 1.539124 GGGAGGAGGGTTGGTCTGT 60.539 63.158 0.00 0.00 0.00 3.41
659 2807 1.229658 AGGGAGGAGGGTTGGTCTG 60.230 63.158 0.00 0.00 0.00 3.51
660 2808 1.081277 GAGGGAGGAGGGTTGGTCT 59.919 63.158 0.00 0.00 0.00 3.85
661 2809 1.229529 TGAGGGAGGAGGGTTGGTC 60.230 63.158 0.00 0.00 0.00 4.02
662 2810 1.539124 GTGAGGGAGGAGGGTTGGT 60.539 63.158 0.00 0.00 0.00 3.67
663 2811 0.042731 TAGTGAGGGAGGAGGGTTGG 59.957 60.000 0.00 0.00 0.00 3.77
664 2812 1.952621 TTAGTGAGGGAGGAGGGTTG 58.047 55.000 0.00 0.00 0.00 3.77
665 2813 2.319438 AGATTAGTGAGGGAGGAGGGTT 59.681 50.000 0.00 0.00 0.00 4.11
666 2814 1.940957 AGATTAGTGAGGGAGGAGGGT 59.059 52.381 0.00 0.00 0.00 4.34
667 2815 2.604139 GAGATTAGTGAGGGAGGAGGG 58.396 57.143 0.00 0.00 0.00 4.30
668 2816 2.178984 AGGAGATTAGTGAGGGAGGAGG 59.821 54.545 0.00 0.00 0.00 4.30
669 2817 3.496331 GAGGAGATTAGTGAGGGAGGAG 58.504 54.545 0.00 0.00 0.00 3.69
670 2818 2.178106 GGAGGAGATTAGTGAGGGAGGA 59.822 54.545 0.00 0.00 0.00 3.71
671 2819 2.604139 GGAGGAGATTAGTGAGGGAGG 58.396 57.143 0.00 0.00 0.00 4.30
672 2820 2.604139 GGGAGGAGATTAGTGAGGGAG 58.396 57.143 0.00 0.00 0.00 4.30
673 2821 1.220750 GGGGAGGAGATTAGTGAGGGA 59.779 57.143 0.00 0.00 0.00 4.20
674 2822 1.723288 GGGGAGGAGATTAGTGAGGG 58.277 60.000 0.00 0.00 0.00 4.30
675 2823 1.723288 GGGGGAGGAGATTAGTGAGG 58.277 60.000 0.00 0.00 0.00 3.86
695 2843 1.303643 GCCCCACCCTGAAACTCAG 60.304 63.158 0.00 0.00 43.91 3.35
696 2844 2.840753 GGCCCCACCCTGAAACTCA 61.841 63.158 0.00 0.00 0.00 3.41
697 2845 2.035783 GGCCCCACCCTGAAACTC 59.964 66.667 0.00 0.00 0.00 3.01
698 2846 2.452491 AGGCCCCACCCTGAAACT 60.452 61.111 0.00 0.00 40.58 2.66
706 2854 4.512914 GATGAGGCAGGCCCCACC 62.513 72.222 6.70 0.00 36.58 4.61
707 2855 1.635817 TTAGATGAGGCAGGCCCCAC 61.636 60.000 6.70 0.00 36.58 4.61
708 2856 0.698886 ATTAGATGAGGCAGGCCCCA 60.699 55.000 6.70 0.77 36.58 4.96
709 2857 0.480252 AATTAGATGAGGCAGGCCCC 59.520 55.000 6.70 0.00 36.58 5.80
710 2858 2.553247 GGTAATTAGATGAGGCAGGCCC 60.553 54.545 6.70 0.00 36.58 5.80
711 2859 2.106511 TGGTAATTAGATGAGGCAGGCC 59.893 50.000 0.97 0.97 0.00 5.19
712 2860 3.492102 TGGTAATTAGATGAGGCAGGC 57.508 47.619 0.00 0.00 0.00 4.85
713 2861 8.352942 GTTTAATTGGTAATTAGATGAGGCAGG 58.647 37.037 0.00 0.00 35.00 4.85
714 2862 8.352942 GGTTTAATTGGTAATTAGATGAGGCAG 58.647 37.037 0.00 0.00 35.00 4.85
715 2863 7.836685 TGGTTTAATTGGTAATTAGATGAGGCA 59.163 33.333 0.00 0.00 35.00 4.75
716 2864 8.232913 TGGTTTAATTGGTAATTAGATGAGGC 57.767 34.615 0.00 0.00 35.00 4.70
717 2865 8.352942 GCTGGTTTAATTGGTAATTAGATGAGG 58.647 37.037 0.00 0.00 35.00 3.86
718 2866 8.352942 GGCTGGTTTAATTGGTAATTAGATGAG 58.647 37.037 0.00 0.00 35.00 2.90
719 2867 7.286775 GGGCTGGTTTAATTGGTAATTAGATGA 59.713 37.037 0.00 0.00 35.00 2.92
720 2868 7.069331 TGGGCTGGTTTAATTGGTAATTAGATG 59.931 37.037 0.00 0.00 35.00 2.90
721 2869 7.069455 GTGGGCTGGTTTAATTGGTAATTAGAT 59.931 37.037 0.00 0.00 35.00 1.98
722 2870 6.378848 GTGGGCTGGTTTAATTGGTAATTAGA 59.621 38.462 0.00 0.00 35.00 2.10
723 2871 6.406512 GGTGGGCTGGTTTAATTGGTAATTAG 60.407 42.308 0.00 0.00 35.00 1.73
724 2872 5.422650 GGTGGGCTGGTTTAATTGGTAATTA 59.577 40.000 0.00 0.00 32.38 1.40
725 2873 4.224147 GGTGGGCTGGTTTAATTGGTAATT 59.776 41.667 0.00 0.00 34.90 1.40
726 2874 3.772572 GGTGGGCTGGTTTAATTGGTAAT 59.227 43.478 0.00 0.00 0.00 1.89
727 2875 3.166679 GGTGGGCTGGTTTAATTGGTAA 58.833 45.455 0.00 0.00 0.00 2.85
728 2876 2.380590 AGGTGGGCTGGTTTAATTGGTA 59.619 45.455 0.00 0.00 0.00 3.25
729 2877 1.149077 AGGTGGGCTGGTTTAATTGGT 59.851 47.619 0.00 0.00 0.00 3.67
730 2878 1.824852 GAGGTGGGCTGGTTTAATTGG 59.175 52.381 0.00 0.00 0.00 3.16
731 2879 2.493278 CTGAGGTGGGCTGGTTTAATTG 59.507 50.000 0.00 0.00 0.00 2.32
732 2880 2.807676 CTGAGGTGGGCTGGTTTAATT 58.192 47.619 0.00 0.00 0.00 1.40
733 2881 1.616994 GCTGAGGTGGGCTGGTTTAAT 60.617 52.381 0.00 0.00 0.00 1.40
734 2882 0.251165 GCTGAGGTGGGCTGGTTTAA 60.251 55.000 0.00 0.00 0.00 1.52
735 2883 1.378762 GCTGAGGTGGGCTGGTTTA 59.621 57.895 0.00 0.00 0.00 2.01
736 2884 2.085343 ATGCTGAGGTGGGCTGGTTT 62.085 55.000 0.00 0.00 0.00 3.27
737 2885 2.085343 AATGCTGAGGTGGGCTGGTT 62.085 55.000 0.00 0.00 0.00 3.67
738 2886 2.541907 AATGCTGAGGTGGGCTGGT 61.542 57.895 0.00 0.00 0.00 4.00
739 2887 2.050350 CAATGCTGAGGTGGGCTGG 61.050 63.158 0.00 0.00 0.00 4.85
740 2888 2.707849 GCAATGCTGAGGTGGGCTG 61.708 63.158 0.00 0.00 0.00 4.85
741 2889 2.362120 GCAATGCTGAGGTGGGCT 60.362 61.111 0.00 0.00 0.00 5.19
742 2890 3.455469 GGCAATGCTGAGGTGGGC 61.455 66.667 4.82 0.00 0.00 5.36
743 2891 2.050350 CAGGCAATGCTGAGGTGGG 61.050 63.158 4.82 0.00 0.00 4.61
744 2892 0.035152 TACAGGCAATGCTGAGGTGG 60.035 55.000 4.82 0.00 0.00 4.61
745 2893 1.825090 TTACAGGCAATGCTGAGGTG 58.175 50.000 4.82 0.00 0.00 4.00
746 2894 2.584835 TTTACAGGCAATGCTGAGGT 57.415 45.000 4.82 1.18 0.00 3.85
747 2895 2.821969 ACTTTTACAGGCAATGCTGAGG 59.178 45.455 4.82 0.00 0.00 3.86
748 2896 3.119708 GGACTTTTACAGGCAATGCTGAG 60.120 47.826 4.82 0.00 27.54 3.35
749 2897 2.819608 GGACTTTTACAGGCAATGCTGA 59.180 45.455 4.82 0.00 27.54 4.26
750 2898 2.821969 AGGACTTTTACAGGCAATGCTG 59.178 45.455 4.82 4.17 27.54 4.41
751 2899 2.821969 CAGGACTTTTACAGGCAATGCT 59.178 45.455 4.82 0.00 27.54 3.79
752 2900 2.558359 ACAGGACTTTTACAGGCAATGC 59.442 45.455 0.00 0.00 27.54 3.56
753 2901 5.957842 TTACAGGACTTTTACAGGCAATG 57.042 39.130 0.00 0.00 27.54 2.82
754 2902 5.048013 GCTTTACAGGACTTTTACAGGCAAT 60.048 40.000 0.00 0.00 27.54 3.56
755 2903 4.277423 GCTTTACAGGACTTTTACAGGCAA 59.723 41.667 0.00 0.00 27.54 4.52
756 2904 3.818773 GCTTTACAGGACTTTTACAGGCA 59.181 43.478 0.00 0.00 27.54 4.75
757 2905 3.190744 GGCTTTACAGGACTTTTACAGGC 59.809 47.826 0.00 0.00 0.00 4.85
758 2906 4.652822 AGGCTTTACAGGACTTTTACAGG 58.347 43.478 0.00 0.00 0.00 4.00
759 2907 4.695928 GGAGGCTTTACAGGACTTTTACAG 59.304 45.833 0.00 0.00 0.00 2.74
760 2908 4.648651 GGAGGCTTTACAGGACTTTTACA 58.351 43.478 0.00 0.00 0.00 2.41
761 2909 3.683340 CGGAGGCTTTACAGGACTTTTAC 59.317 47.826 0.00 0.00 0.00 2.01
762 2910 3.325716 ACGGAGGCTTTACAGGACTTTTA 59.674 43.478 0.00 0.00 0.00 1.52
763 2911 2.105993 ACGGAGGCTTTACAGGACTTTT 59.894 45.455 0.00 0.00 0.00 2.27
764 2912 1.697982 ACGGAGGCTTTACAGGACTTT 59.302 47.619 0.00 0.00 0.00 2.66
765 2913 1.349067 ACGGAGGCTTTACAGGACTT 58.651 50.000 0.00 0.00 0.00 3.01
766 2914 1.823610 GTACGGAGGCTTTACAGGACT 59.176 52.381 0.00 0.00 0.00 3.85
767 2915 1.468736 CGTACGGAGGCTTTACAGGAC 60.469 57.143 7.57 0.00 0.00 3.85
768 2916 0.813184 CGTACGGAGGCTTTACAGGA 59.187 55.000 7.57 0.00 0.00 3.86
769 2917 0.529378 ACGTACGGAGGCTTTACAGG 59.471 55.000 21.06 0.00 0.00 4.00
770 2918 1.471684 AGACGTACGGAGGCTTTACAG 59.528 52.381 21.06 0.00 0.00 2.74
771 2919 1.538047 AGACGTACGGAGGCTTTACA 58.462 50.000 21.06 0.00 0.00 2.41
772 2920 2.540565 GCTAGACGTACGGAGGCTTTAC 60.541 54.545 21.06 0.00 0.00 2.01
773 2921 1.672881 GCTAGACGTACGGAGGCTTTA 59.327 52.381 21.06 0.00 0.00 1.85
774 2922 0.455005 GCTAGACGTACGGAGGCTTT 59.545 55.000 21.06 0.00 0.00 3.51
775 2923 0.679002 TGCTAGACGTACGGAGGCTT 60.679 55.000 21.06 0.00 0.00 4.35
776 2924 0.465824 ATGCTAGACGTACGGAGGCT 60.466 55.000 21.06 12.98 0.00 4.58
777 2925 0.384669 AATGCTAGACGTACGGAGGC 59.615 55.000 21.06 17.10 0.00 4.70
778 2926 1.864435 GCAATGCTAGACGTACGGAGG 60.864 57.143 21.06 7.73 0.00 4.30
779 2927 1.478137 GCAATGCTAGACGTACGGAG 58.522 55.000 21.06 14.21 0.00 4.63
780 2928 0.101759 GGCAATGCTAGACGTACGGA 59.898 55.000 21.06 3.34 0.00 4.69
781 2929 1.206745 CGGCAATGCTAGACGTACGG 61.207 60.000 21.06 2.24 0.00 4.02
782 2930 0.248336 TCGGCAATGCTAGACGTACG 60.248 55.000 15.01 15.01 0.00 3.67
783 2931 1.917273 TTCGGCAATGCTAGACGTAC 58.083 50.000 4.82 0.00 0.00 3.67
784 2932 2.882927 ATTCGGCAATGCTAGACGTA 57.117 45.000 4.82 0.00 0.00 3.57
785 2933 2.024176 AATTCGGCAATGCTAGACGT 57.976 45.000 4.82 0.00 0.00 4.34
786 2934 3.405170 AAAATTCGGCAATGCTAGACG 57.595 42.857 4.82 0.00 0.00 4.18
787 2935 4.201783 ACGTAAAATTCGGCAATGCTAGAC 60.202 41.667 4.82 0.00 0.00 2.59
788 2936 3.936453 ACGTAAAATTCGGCAATGCTAGA 59.064 39.130 4.82 2.30 0.00 2.43
789 2937 4.028383 CACGTAAAATTCGGCAATGCTAG 58.972 43.478 4.82 0.00 0.00 3.42
790 2938 3.437395 ACACGTAAAATTCGGCAATGCTA 59.563 39.130 4.82 0.00 0.00 3.49
791 2939 2.227865 ACACGTAAAATTCGGCAATGCT 59.772 40.909 4.82 0.00 0.00 3.79
792 2940 2.341168 CACACGTAAAATTCGGCAATGC 59.659 45.455 0.00 0.00 0.00 3.56
793 2941 3.602062 GTCACACGTAAAATTCGGCAATG 59.398 43.478 0.00 0.00 0.00 2.82
794 2942 3.665848 CGTCACACGTAAAATTCGGCAAT 60.666 43.478 0.00 0.00 36.74 3.56
795 2943 2.348685 CGTCACACGTAAAATTCGGCAA 60.349 45.455 0.00 0.00 36.74 4.52
796 2944 1.192757 CGTCACACGTAAAATTCGGCA 59.807 47.619 0.00 0.00 36.74 5.69
797 2945 1.456544 TCGTCACACGTAAAATTCGGC 59.543 47.619 0.00 0.00 43.14 5.54
798 2946 2.727798 AGTCGTCACACGTAAAATTCGG 59.272 45.455 0.00 0.00 43.14 4.30
799 2947 4.364817 AAGTCGTCACACGTAAAATTCG 57.635 40.909 0.00 0.00 43.14 3.34
800 2948 4.371882 CGAAGTCGTCACACGTAAAATTC 58.628 43.478 0.00 0.00 43.14 2.17
801 2949 3.362304 GCGAAGTCGTCACACGTAAAATT 60.362 43.478 2.25 0.00 43.14 1.82
809 2957 3.479866 CGAATAAAGCGAAGTCGTCACAC 60.480 47.826 2.25 0.00 42.22 3.82
957 4863 2.874701 TGTCTCTTGCTCTCTTTTGTGC 59.125 45.455 0.00 0.00 0.00 4.57
958 4864 3.060003 CGTGTCTCTTGCTCTCTTTTGTG 60.060 47.826 0.00 0.00 0.00 3.33
959 4865 3.126831 CGTGTCTCTTGCTCTCTTTTGT 58.873 45.455 0.00 0.00 0.00 2.83
960 4866 3.126831 ACGTGTCTCTTGCTCTCTTTTG 58.873 45.455 0.00 0.00 0.00 2.44
961 4867 3.460857 ACGTGTCTCTTGCTCTCTTTT 57.539 42.857 0.00 0.00 0.00 2.27
962 4868 3.609644 CGTACGTGTCTCTTGCTCTCTTT 60.610 47.826 7.22 0.00 0.00 2.52
978 4886 1.207593 GTGCCTCGTGTACGTACGT 59.792 57.895 25.98 25.98 44.06 3.57
979 4887 1.061799 GTGTGCCTCGTGTACGTACG 61.062 60.000 20.18 15.01 44.98 3.67
980 4888 0.040157 TGTGTGCCTCGTGTACGTAC 60.040 55.000 18.90 18.90 40.80 3.67
981 4889 0.667453 TTGTGTGCCTCGTGTACGTA 59.333 50.000 4.20 0.00 40.80 3.57
1011 4919 0.820482 TCTCCGTCGACAACACCTGA 60.820 55.000 17.16 0.66 0.00 3.86
1202 5113 3.771160 CGGCCAGCGGGTAGAACT 61.771 66.667 2.24 0.00 36.17 3.01
1620 5540 2.202756 GGCTCCGGCTTGTACTCG 60.203 66.667 0.00 0.00 38.73 4.18
1662 5585 3.740397 CTCGCGTACGTGGACCCA 61.740 66.667 26.98 7.92 41.18 4.51
1871 5794 1.526225 GCATTCCCGAAGTAGCCCC 60.526 63.158 0.00 0.00 0.00 5.80
2022 5945 2.431771 TTCATCACGTCCACGCCG 60.432 61.111 0.00 0.00 44.43 6.46
2309 6237 0.318360 TGCAACGAACGTCAGACGAT 60.318 50.000 29.53 18.35 46.05 3.73
2310 6238 0.318360 ATGCAACGAACGTCAGACGA 60.318 50.000 29.53 4.48 46.05 4.20
2312 6240 0.163788 CCATGCAACGAACGTCAGAC 59.836 55.000 0.00 0.00 0.00 3.51
2313 6241 0.032815 TCCATGCAACGAACGTCAGA 59.967 50.000 0.00 0.00 0.00 3.27
2314 6242 1.078709 ATCCATGCAACGAACGTCAG 58.921 50.000 0.00 0.00 0.00 3.51
2315 6243 1.196581 CAATCCATGCAACGAACGTCA 59.803 47.619 0.00 0.00 0.00 4.35
2362 6311 8.762645 ACACTATACAATCCATTCTCTCTCAAA 58.237 33.333 0.00 0.00 0.00 2.69
2388 6563 1.679139 GCCTATAGCACATGCAACCA 58.321 50.000 6.64 0.00 45.16 3.67
2549 6733 3.124466 GCATTGCACGTACACATTGACTA 59.876 43.478 3.15 0.00 0.00 2.59
2551 6735 2.241722 GCATTGCACGTACACATTGAC 58.758 47.619 3.15 1.49 0.00 3.18
2552 6736 1.876156 TGCATTGCACGTACACATTGA 59.124 42.857 7.38 0.00 31.71 2.57
2553 6737 2.328655 TGCATTGCACGTACACATTG 57.671 45.000 7.38 0.00 31.71 2.82
2564 6748 5.046529 ACTTTGAAATTAACGTGCATTGCA 58.953 33.333 7.38 7.38 35.60 4.08
2565 6749 5.574815 ACTTTGAAATTAACGTGCATTGC 57.425 34.783 0.46 0.46 0.00 3.56
2577 6761 9.236691 CGCATGCACTTAATATACTTTGAAATT 57.763 29.630 19.57 0.00 0.00 1.82
2578 6762 7.862372 CCGCATGCACTTAATATACTTTGAAAT 59.138 33.333 19.57 0.00 0.00 2.17
2579 6763 7.066404 TCCGCATGCACTTAATATACTTTGAAA 59.934 33.333 19.57 0.00 0.00 2.69
2580 6764 6.540551 TCCGCATGCACTTAATATACTTTGAA 59.459 34.615 19.57 0.00 0.00 2.69
2581 6765 6.052360 TCCGCATGCACTTAATATACTTTGA 58.948 36.000 19.57 0.00 0.00 2.69
2582 6766 6.299023 TCCGCATGCACTTAATATACTTTG 57.701 37.500 19.57 0.00 0.00 2.77
2583 6767 8.792830 ATATCCGCATGCACTTAATATACTTT 57.207 30.769 19.57 0.00 0.00 2.66
2584 6768 8.792830 AATATCCGCATGCACTTAATATACTT 57.207 30.769 19.57 0.00 0.00 2.24
2585 6769 9.884636 TTAATATCCGCATGCACTTAATATACT 57.115 29.630 19.57 2.37 0.00 2.12
2587 6771 9.884636 ACTTAATATCCGCATGCACTTAATATA 57.115 29.630 19.57 4.53 0.00 0.86
2588 6772 8.792830 ACTTAATATCCGCATGCACTTAATAT 57.207 30.769 19.57 9.48 0.00 1.28
2589 6773 9.366216 CTACTTAATATCCGCATGCACTTAATA 57.634 33.333 19.57 7.60 0.00 0.98
2590 6774 7.334421 CCTACTTAATATCCGCATGCACTTAAT 59.666 37.037 19.57 5.58 0.00 1.40
2591 6775 6.649141 CCTACTTAATATCCGCATGCACTTAA 59.351 38.462 19.57 11.55 0.00 1.85
2592 6776 6.014925 TCCTACTTAATATCCGCATGCACTTA 60.015 38.462 19.57 5.72 0.00 2.24
2593 6777 4.997395 CCTACTTAATATCCGCATGCACTT 59.003 41.667 19.57 3.39 0.00 3.16
2594 6778 4.283467 TCCTACTTAATATCCGCATGCACT 59.717 41.667 19.57 3.59 0.00 4.40
2595 6779 4.566004 TCCTACTTAATATCCGCATGCAC 58.434 43.478 19.57 0.00 0.00 4.57
2596 6780 4.882842 TCCTACTTAATATCCGCATGCA 57.117 40.909 19.57 0.00 0.00 3.96
2597 6781 9.712305 ATAATATCCTACTTAATATCCGCATGC 57.288 33.333 7.91 7.91 0.00 4.06
2649 6833 8.976471 CGTGCAATTAATTTCATGCCAAATATA 58.024 29.630 7.04 0.00 38.00 0.86
2650 6834 7.518689 GCGTGCAATTAATTTCATGCCAAATAT 60.519 33.333 25.48 0.00 38.00 1.28
2651 6835 6.238049 GCGTGCAATTAATTTCATGCCAAATA 60.238 34.615 25.48 0.00 38.00 1.40
2652 6836 5.447548 GCGTGCAATTAATTTCATGCCAAAT 60.448 36.000 25.48 0.00 38.00 2.32
2653 6837 4.142945 GCGTGCAATTAATTTCATGCCAAA 60.143 37.500 25.48 0.38 38.00 3.28
2654 6838 3.370366 GCGTGCAATTAATTTCATGCCAA 59.630 39.130 25.48 0.99 38.00 4.52
2655 6839 2.928757 GCGTGCAATTAATTTCATGCCA 59.071 40.909 25.48 6.03 38.00 4.92
2656 6840 3.189285 AGCGTGCAATTAATTTCATGCC 58.811 40.909 29.45 17.78 41.08 4.40
2657 6841 5.947503 TTAGCGTGCAATTAATTTCATGC 57.052 34.783 27.36 27.36 40.63 4.06
2658 6842 6.394076 CGTTTAGCGTGCAATTAATTTCATG 58.606 36.000 13.68 13.68 35.54 3.07
2659 6843 6.553255 CGTTTAGCGTGCAATTAATTTCAT 57.447 33.333 3.83 0.00 35.54 2.57
2660 6844 5.983790 CGTTTAGCGTGCAATTAATTTCA 57.016 34.783 0.00 0.00 35.54 2.69
2675 6859 0.179248 GAGCGCTCAACACGTTTAGC 60.179 55.000 31.91 6.11 36.68 3.09
2676 6860 0.091344 CGAGCGCTCAACACGTTTAG 59.909 55.000 34.69 12.34 0.00 1.85
2677 6861 0.318022 TCGAGCGCTCAACACGTTTA 60.318 50.000 34.69 4.78 0.00 2.01
2678 6862 1.590525 TCGAGCGCTCAACACGTTT 60.591 52.632 34.69 0.00 0.00 3.60
2679 6863 2.027024 TCGAGCGCTCAACACGTT 59.973 55.556 34.69 0.00 0.00 3.99
2680 6864 2.729862 GTCGAGCGCTCAACACGT 60.730 61.111 34.69 0.00 0.00 4.49
2681 6865 1.617755 AATGTCGAGCGCTCAACACG 61.618 55.000 31.93 20.44 0.00 4.49
2682 6866 0.179240 CAATGTCGAGCGCTCAACAC 60.179 55.000 31.93 24.81 0.00 3.32
2683 6867 0.319469 TCAATGTCGAGCGCTCAACA 60.319 50.000 31.47 31.47 0.00 3.33
2684 6868 0.790207 TTCAATGTCGAGCGCTCAAC 59.210 50.000 34.69 28.50 0.00 3.18
2685 6869 1.194547 GTTTCAATGTCGAGCGCTCAA 59.805 47.619 34.69 17.41 0.00 3.02
2686 6870 0.790207 GTTTCAATGTCGAGCGCTCA 59.210 50.000 34.69 18.66 0.00 4.26
2687 6871 0.790207 TGTTTCAATGTCGAGCGCTC 59.210 50.000 27.64 27.64 0.00 5.03
2688 6872 0.792640 CTGTTTCAATGTCGAGCGCT 59.207 50.000 11.27 11.27 0.00 5.92
2689 6873 0.512952 ACTGTTTCAATGTCGAGCGC 59.487 50.000 0.00 0.00 0.00 5.92
2690 6874 2.061773 AGACTGTTTCAATGTCGAGCG 58.938 47.619 0.00 0.00 36.01 5.03
2691 6875 3.614616 CCTAGACTGTTTCAATGTCGAGC 59.385 47.826 0.00 0.00 33.95 5.03
2692 6876 4.810790 ACCTAGACTGTTTCAATGTCGAG 58.189 43.478 0.00 0.00 36.01 4.04
2693 6877 4.615223 CGACCTAGACTGTTTCAATGTCGA 60.615 45.833 0.00 0.00 40.27 4.20
2694 6878 3.608506 CGACCTAGACTGTTTCAATGTCG 59.391 47.826 0.00 0.00 35.56 4.35
2695 6879 4.557205 ACGACCTAGACTGTTTCAATGTC 58.443 43.478 0.00 0.00 0.00 3.06
2696 6880 4.602340 ACGACCTAGACTGTTTCAATGT 57.398 40.909 0.00 0.00 0.00 2.71
2697 6881 4.152402 CCAACGACCTAGACTGTTTCAATG 59.848 45.833 0.00 0.00 0.00 2.82
2698 6882 4.039973 TCCAACGACCTAGACTGTTTCAAT 59.960 41.667 0.00 0.00 0.00 2.57
2699 6883 3.385433 TCCAACGACCTAGACTGTTTCAA 59.615 43.478 0.00 0.00 0.00 2.69
2700 6884 2.960384 TCCAACGACCTAGACTGTTTCA 59.040 45.455 0.00 0.00 0.00 2.69
2701 6885 3.655276 TCCAACGACCTAGACTGTTTC 57.345 47.619 0.00 0.00 0.00 2.78
2702 6886 4.039973 TCAATCCAACGACCTAGACTGTTT 59.960 41.667 0.00 0.00 0.00 2.83
2703 6887 3.576982 TCAATCCAACGACCTAGACTGTT 59.423 43.478 0.00 0.00 0.00 3.16
2704 6888 3.056749 GTCAATCCAACGACCTAGACTGT 60.057 47.826 0.00 0.00 0.00 3.55
2705 6889 3.056821 TGTCAATCCAACGACCTAGACTG 60.057 47.826 0.00 0.00 0.00 3.51
2706 6890 3.162666 TGTCAATCCAACGACCTAGACT 58.837 45.455 0.00 0.00 0.00 3.24
2707 6891 3.587797 TGTCAATCCAACGACCTAGAC 57.412 47.619 0.00 0.00 0.00 2.59
2708 6892 3.767131 TCATGTCAATCCAACGACCTAGA 59.233 43.478 0.00 0.00 0.00 2.43
2709 6893 4.123497 TCATGTCAATCCAACGACCTAG 57.877 45.455 0.00 0.00 0.00 3.02
2710 6894 4.753516 ATCATGTCAATCCAACGACCTA 57.246 40.909 0.00 0.00 0.00 3.08
2711 6895 3.634397 ATCATGTCAATCCAACGACCT 57.366 42.857 0.00 0.00 0.00 3.85
2712 6896 4.155826 TCAAATCATGTCAATCCAACGACC 59.844 41.667 0.00 0.00 0.00 4.79
2713 6897 5.295431 TCAAATCATGTCAATCCAACGAC 57.705 39.130 0.00 0.00 0.00 4.34
2714 6898 6.238456 GCTATCAAATCATGTCAATCCAACGA 60.238 38.462 0.00 0.00 0.00 3.85
2715 6899 5.911280 GCTATCAAATCATGTCAATCCAACG 59.089 40.000 0.00 0.00 0.00 4.10
2716 6900 6.211515 GGCTATCAAATCATGTCAATCCAAC 58.788 40.000 0.00 0.00 0.00 3.77
2717 6901 5.008911 CGGCTATCAAATCATGTCAATCCAA 59.991 40.000 0.00 0.00 0.00 3.53
2718 6902 4.516321 CGGCTATCAAATCATGTCAATCCA 59.484 41.667 0.00 0.00 0.00 3.41
2719 6903 4.756642 TCGGCTATCAAATCATGTCAATCC 59.243 41.667 0.00 0.00 0.00 3.01
2720 6904 5.698089 TCTCGGCTATCAAATCATGTCAATC 59.302 40.000 0.00 0.00 0.00 2.67
2721 6905 5.614308 TCTCGGCTATCAAATCATGTCAAT 58.386 37.500 0.00 0.00 0.00 2.57
2722 6906 5.022282 TCTCGGCTATCAAATCATGTCAA 57.978 39.130 0.00 0.00 0.00 3.18
2723 6907 4.670896 TCTCGGCTATCAAATCATGTCA 57.329 40.909 0.00 0.00 0.00 3.58
2724 6908 7.658179 TTAATCTCGGCTATCAAATCATGTC 57.342 36.000 0.00 0.00 0.00 3.06
2725 6909 8.509690 CAATTAATCTCGGCTATCAAATCATGT 58.490 33.333 0.00 0.00 0.00 3.21
2726 6910 7.966753 CCAATTAATCTCGGCTATCAAATCATG 59.033 37.037 0.00 0.00 0.00 3.07
2727 6911 7.884877 TCCAATTAATCTCGGCTATCAAATCAT 59.115 33.333 0.00 0.00 0.00 2.45
2728 6912 7.223584 TCCAATTAATCTCGGCTATCAAATCA 58.776 34.615 0.00 0.00 0.00 2.57
2729 6913 7.672983 TCCAATTAATCTCGGCTATCAAATC 57.327 36.000 0.00 0.00 0.00 2.17
2730 6914 8.105829 AGATCCAATTAATCTCGGCTATCAAAT 58.894 33.333 0.00 0.00 0.00 2.32
2731 6915 7.388776 CAGATCCAATTAATCTCGGCTATCAAA 59.611 37.037 0.62 0.00 31.05 2.69
2732 6916 6.875726 CAGATCCAATTAATCTCGGCTATCAA 59.124 38.462 0.62 0.00 31.05 2.57
2733 6917 6.401394 CAGATCCAATTAATCTCGGCTATCA 58.599 40.000 0.62 0.00 31.05 2.15
2734 6918 5.293079 GCAGATCCAATTAATCTCGGCTATC 59.707 44.000 0.62 0.00 31.05 2.08
2735 6919 5.181748 GCAGATCCAATTAATCTCGGCTAT 58.818 41.667 0.62 0.00 31.05 2.97
2736 6920 4.563580 GGCAGATCCAATTAATCTCGGCTA 60.564 45.833 9.98 0.00 31.05 3.93
2737 6921 3.406764 GCAGATCCAATTAATCTCGGCT 58.593 45.455 0.62 0.00 31.05 5.52
2738 6922 2.485814 GGCAGATCCAATTAATCTCGGC 59.514 50.000 0.62 2.99 31.05 5.54
2739 6923 3.077359 GGGCAGATCCAATTAATCTCGG 58.923 50.000 0.62 0.00 36.21 4.63
2740 6924 3.077359 GGGGCAGATCCAATTAATCTCG 58.923 50.000 0.62 0.00 36.21 4.04
2741 6925 4.379302 AGGGGCAGATCCAATTAATCTC 57.621 45.455 0.62 0.00 36.21 2.75
2742 6926 4.821532 AAGGGGCAGATCCAATTAATCT 57.178 40.909 0.00 0.00 36.21 2.40
2743 6927 4.039609 CCAAAGGGGCAGATCCAATTAATC 59.960 45.833 0.00 0.00 36.21 1.75
2744 6928 3.969312 CCAAAGGGGCAGATCCAATTAAT 59.031 43.478 0.00 0.00 36.21 1.40
2745 6929 3.373830 CCAAAGGGGCAGATCCAATTAA 58.626 45.455 0.00 0.00 36.21 1.40
2746 6930 3.030873 CCAAAGGGGCAGATCCAATTA 57.969 47.619 0.00 0.00 36.21 1.40
2747 6931 1.870064 CCAAAGGGGCAGATCCAATT 58.130 50.000 0.00 0.00 36.21 2.32
2748 6932 3.621419 CCAAAGGGGCAGATCCAAT 57.379 52.632 0.00 0.00 36.21 3.16
2806 6990 9.811995 GAAAACTTATTTTGGGTAAGTCAACTT 57.188 29.630 0.46 0.46 40.49 2.66
2807 6991 8.973182 TGAAAACTTATTTTGGGTAAGTCAACT 58.027 29.630 0.00 0.00 40.49 3.16
2808 6992 9.244799 CTGAAAACTTATTTTGGGTAAGTCAAC 57.755 33.333 0.00 0.00 40.49 3.18
2849 7033 6.800890 AGGAAGGCCCTTCTTCTATTAAAAA 58.199 36.000 22.35 0.00 44.85 1.94
2870 7054 7.291182 TGGTTTCTTTAATGGAAATTGGAAGGA 59.709 33.333 7.18 0.00 35.55 3.36
2877 7061 7.452562 ACTGCATGGTTTCTTTAATGGAAATT 58.547 30.769 0.00 0.00 35.55 1.82
2900 7084 7.173390 GTGCAGTAGTTTGATCTTAGGAAAACT 59.827 37.037 10.39 10.39 43.38 2.66
2904 7088 6.109156 TGTGCAGTAGTTTGATCTTAGGAA 57.891 37.500 0.00 0.00 0.00 3.36
2907 7091 6.073765 ACGTTTGTGCAGTAGTTTGATCTTAG 60.074 38.462 0.00 0.00 0.00 2.18
2913 7097 5.121925 TGTTTACGTTTGTGCAGTAGTTTGA 59.878 36.000 0.00 0.00 0.00 2.69
2954 7138 1.706995 TTTGGTCGGGCCTTGTGGTA 61.707 55.000 0.84 0.00 38.35 3.25
2957 7141 1.178534 ATGTTTGGTCGGGCCTTGTG 61.179 55.000 0.84 0.00 38.35 3.33
2960 7144 0.609131 CAGATGTTTGGTCGGGCCTT 60.609 55.000 0.84 0.00 38.35 4.35
2967 7151 2.485814 GAGAAGTGGCAGATGTTTGGTC 59.514 50.000 0.00 0.00 0.00 4.02
2968 7152 2.508526 GAGAAGTGGCAGATGTTTGGT 58.491 47.619 0.00 0.00 0.00 3.67
2977 7163 1.984570 TCCCCTCGAGAAGTGGCAG 60.985 63.158 15.71 0.00 32.31 4.85
2983 7169 2.034607 GGATCGTCCCCTCGAGAAG 58.965 63.158 15.71 4.51 43.00 2.85
3024 7210 1.671845 GGTCTAGCGATGTCGTCTCTT 59.328 52.381 4.20 0.00 42.22 2.85
3059 7245 7.593875 TCATTTTATGTTTGTATGCCTTTGC 57.406 32.000 0.00 0.00 38.26 3.68
3109 7295 4.036734 TGATCCTGTGAAGCTGTTTGTTTC 59.963 41.667 0.00 0.00 36.58 2.78
3113 7299 4.008330 AGATGATCCTGTGAAGCTGTTTG 58.992 43.478 0.00 0.00 0.00 2.93
3115 7301 3.996921 AGATGATCCTGTGAAGCTGTT 57.003 42.857 0.00 0.00 0.00 3.16
3126 7312 9.171877 GTGAACAAAAGATAAGAAGATGATCCT 57.828 33.333 0.00 0.00 0.00 3.24
3140 7326 7.369803 CTACATGCTGTAGTGAACAAAAGAT 57.630 36.000 12.51 0.00 43.93 2.40
3141 7327 6.785488 CTACATGCTGTAGTGAACAAAAGA 57.215 37.500 12.51 0.00 43.93 2.52
3154 7340 1.206371 GTAACGGGGTCTACATGCTGT 59.794 52.381 0.00 0.00 0.00 4.40
3159 7345 0.971959 TGGCGTAACGGGGTCTACAT 60.972 55.000 0.00 0.00 0.00 2.29
3167 7353 2.542907 GCATGGATGGCGTAACGGG 61.543 63.158 0.00 0.00 0.00 5.28
3168 7354 3.022287 GCATGGATGGCGTAACGG 58.978 61.111 0.00 0.00 0.00 4.44
3212 7398 2.514803 GGGGCAAGACTTCTTAAGCAA 58.485 47.619 0.00 0.00 34.28 3.91
3213 7399 1.271926 GGGGGCAAGACTTCTTAAGCA 60.272 52.381 0.00 0.00 34.28 3.91
3214 7400 1.271926 TGGGGGCAAGACTTCTTAAGC 60.272 52.381 0.00 0.00 34.28 3.09
3215 7401 2.437413 GTGGGGGCAAGACTTCTTAAG 58.563 52.381 0.00 0.00 34.28 1.85
3216 7402 1.074889 GGTGGGGGCAAGACTTCTTAA 59.925 52.381 0.00 0.00 34.28 1.85
3217 7403 0.696501 GGTGGGGGCAAGACTTCTTA 59.303 55.000 0.00 0.00 34.28 2.10
3218 7404 1.360393 TGGTGGGGGCAAGACTTCTT 61.360 55.000 0.00 0.00 36.45 2.52
3219 7405 1.142688 ATGGTGGGGGCAAGACTTCT 61.143 55.000 0.00 0.00 0.00 2.85
3220 7406 0.681243 GATGGTGGGGGCAAGACTTC 60.681 60.000 0.00 0.00 0.00 3.01
3221 7407 1.384191 GATGGTGGGGGCAAGACTT 59.616 57.895 0.00 0.00 0.00 3.01
3222 7408 1.217057 ATGATGGTGGGGGCAAGACT 61.217 55.000 0.00 0.00 0.00 3.24
3223 7409 0.324645 AATGATGGTGGGGGCAAGAC 60.325 55.000 0.00 0.00 0.00 3.01
3224 7410 0.324552 CAATGATGGTGGGGGCAAGA 60.325 55.000 0.00 0.00 0.00 3.02
3225 7411 1.963464 GCAATGATGGTGGGGGCAAG 61.963 60.000 0.00 0.00 0.00 4.01
3226 7412 1.988956 GCAATGATGGTGGGGGCAA 60.989 57.895 0.00 0.00 0.00 4.52
3227 7413 2.364056 GCAATGATGGTGGGGGCA 60.364 61.111 0.00 0.00 0.00 5.36
3228 7414 3.156556 GGCAATGATGGTGGGGGC 61.157 66.667 0.00 0.00 0.00 5.80
3229 7415 1.456331 GAGGCAATGATGGTGGGGG 60.456 63.158 0.00 0.00 0.00 5.40
3230 7416 0.466922 GAGAGGCAATGATGGTGGGG 60.467 60.000 0.00 0.00 0.00 4.96
3231 7417 0.549950 AGAGAGGCAATGATGGTGGG 59.450 55.000 0.00 0.00 0.00 4.61
3232 7418 2.431954 AAGAGAGGCAATGATGGTGG 57.568 50.000 0.00 0.00 0.00 4.61
3233 7419 4.796038 AAAAAGAGAGGCAATGATGGTG 57.204 40.909 0.00 0.00 0.00 4.17
3252 7438 6.016360 TCGATTTTGCAGATCAAGGAGAAAAA 60.016 34.615 11.30 0.00 35.84 1.94
3253 7439 5.473162 TCGATTTTGCAGATCAAGGAGAAAA 59.527 36.000 11.30 0.00 35.84 2.29
3254 7440 5.003160 TCGATTTTGCAGATCAAGGAGAAA 58.997 37.500 11.30 0.00 35.84 2.52
3255 7441 4.393062 GTCGATTTTGCAGATCAAGGAGAA 59.607 41.667 11.30 0.00 35.84 2.87
3256 7442 3.935203 GTCGATTTTGCAGATCAAGGAGA 59.065 43.478 11.30 0.05 35.84 3.71
3257 7443 3.064545 GGTCGATTTTGCAGATCAAGGAG 59.935 47.826 11.30 0.00 35.84 3.69
3258 7444 3.009723 GGTCGATTTTGCAGATCAAGGA 58.990 45.455 11.30 0.00 35.84 3.36
3259 7445 2.749076 TGGTCGATTTTGCAGATCAAGG 59.251 45.455 11.30 0.00 35.84 3.61
3260 7446 4.161333 GTTGGTCGATTTTGCAGATCAAG 58.839 43.478 11.30 0.00 35.91 3.02
3261 7447 3.057596 GGTTGGTCGATTTTGCAGATCAA 60.058 43.478 11.30 4.19 33.19 2.57
3262 7448 2.487762 GGTTGGTCGATTTTGCAGATCA 59.512 45.455 11.30 0.00 0.00 2.92
3263 7449 2.159379 GGGTTGGTCGATTTTGCAGATC 60.159 50.000 0.00 2.87 0.00 2.75
3264 7450 1.818674 GGGTTGGTCGATTTTGCAGAT 59.181 47.619 0.00 0.00 0.00 2.90
3265 7451 1.243902 GGGTTGGTCGATTTTGCAGA 58.756 50.000 0.00 0.00 0.00 4.26
3266 7452 0.958091 TGGGTTGGTCGATTTTGCAG 59.042 50.000 0.00 0.00 0.00 4.41
3267 7453 0.671251 GTGGGTTGGTCGATTTTGCA 59.329 50.000 0.00 0.00 0.00 4.08
3268 7454 0.386731 CGTGGGTTGGTCGATTTTGC 60.387 55.000 0.00 0.00 0.00 3.68
3269 7455 1.231221 TCGTGGGTTGGTCGATTTTG 58.769 50.000 0.00 0.00 0.00 2.44
3270 7456 2.081462 GATCGTGGGTTGGTCGATTTT 58.919 47.619 0.00 0.00 42.91 1.82
3271 7457 1.677820 GGATCGTGGGTTGGTCGATTT 60.678 52.381 0.00 0.00 42.91 2.17
3272 7458 0.107848 GGATCGTGGGTTGGTCGATT 60.108 55.000 0.00 0.00 42.91 3.34
3273 7459 1.261938 TGGATCGTGGGTTGGTCGAT 61.262 55.000 0.00 0.00 44.98 3.59
3274 7460 1.473497 TTGGATCGTGGGTTGGTCGA 61.473 55.000 0.00 0.00 37.96 4.20
3275 7461 0.392461 ATTGGATCGTGGGTTGGTCG 60.392 55.000 0.00 0.00 0.00 4.79
3276 7462 2.702592 TATTGGATCGTGGGTTGGTC 57.297 50.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.