Multiple sequence alignment - TraesCS7A01G149900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G149900 chr7A 100.000 3419 0 0 1 3419 103073795 103070377 0.000000e+00 6314.0
1 TraesCS7A01G149900 chr7A 83.901 1292 180 18 1018 2298 103114560 103115834 0.000000e+00 1208.0
2 TraesCS7A01G149900 chr7A 94.208 259 11 4 505 762 424976352 424976607 3.200000e-105 392.0
3 TraesCS7A01G149900 chr7D 93.682 1757 88 11 763 2514 100941090 100939352 0.000000e+00 2608.0
4 TraesCS7A01G149900 chr7D 95.398 1456 43 10 966 2409 100306373 100307816 0.000000e+00 2296.0
5 TraesCS7A01G149900 chr7D 83.926 1294 180 18 1016 2298 100986454 100987730 0.000000e+00 1212.0
6 TraesCS7A01G149900 chr7D 89.254 670 55 6 2694 3349 100309645 100310311 0.000000e+00 822.0
7 TraesCS7A01G149900 chr7D 91.727 411 31 2 100 508 100941498 100941089 4.950000e-158 568.0
8 TraesCS7A01G149900 chr7D 94.574 258 12 1 507 762 369463269 369463526 6.870000e-107 398.0
9 TraesCS7A01G149900 chr7D 98.198 111 2 0 3309 3419 100939031 100938921 9.680000e-46 195.0
10 TraesCS7A01G149900 chr7D 93.458 107 5 1 1 105 100970249 100970143 1.270000e-34 158.0
11 TraesCS7A01G149900 chr7D 78.744 207 22 18 2309 2497 100938992 100938790 5.990000e-23 119.0
12 TraesCS7A01G149900 chr7D 91.837 49 4 0 839 887 626257391 626257439 6.120000e-08 69.4
13 TraesCS7A01G149900 chr7B 93.641 1604 64 17 813 2409 57067414 57065842 0.000000e+00 2362.0
14 TraesCS7A01G149900 chr7B 94.059 1397 67 10 1013 2409 56389055 56390435 0.000000e+00 2106.0
15 TraesCS7A01G149900 chr7B 84.068 1293 182 12 1016 2299 57268056 57269333 0.000000e+00 1225.0
16 TraesCS7A01G149900 chr7B 88.889 522 45 1 2841 3349 56455997 56456518 6.230000e-177 630.0
17 TraesCS7A01G149900 chr7B 86.100 482 54 5 2881 3349 57063393 57062912 1.090000e-139 507.0
18 TraesCS7A01G149900 chr7B 91.753 194 14 2 2694 2887 57065711 57065520 5.620000e-68 268.0
19 TraesCS7A01G149900 chr7B 90.385 156 13 1 2694 2849 56449293 56449446 1.610000e-48 204.0
20 TraesCS7A01G149900 chr7B 91.549 142 2 5 813 946 56388618 56388757 1.620000e-43 187.0
21 TraesCS7A01G149900 chr7B 86.957 115 6 3 2409 2514 57065814 57065700 1.670000e-23 121.0
22 TraesCS7A01G149900 chr7B 97.727 44 1 0 465 508 56388544 56388587 3.660000e-10 76.8
23 TraesCS7A01G149900 chr7B 88.889 54 6 0 834 887 726008060 726008113 2.200000e-07 67.6
24 TraesCS7A01G149900 chr7B 87.037 54 7 0 834 887 725825371 725825318 1.020000e-05 62.1
25 TraesCS7A01G149900 chr6B 83.577 1297 202 7 1023 2315 11174548 11173259 0.000000e+00 1205.0
26 TraesCS7A01G149900 chr6B 95.238 252 12 0 511 762 347227142 347227393 1.910000e-107 399.0
27 TraesCS7A01G149900 chr6B 99.451 182 1 0 2511 2692 613442569 613442750 7.070000e-87 331.0
28 TraesCS7A01G149900 chr3D 83.126 1286 191 15 1023 2298 428532629 428533898 0.000000e+00 1149.0
29 TraesCS7A01G149900 chr3D 93.116 276 15 3 498 770 269465480 269465754 5.310000e-108 401.0
30 TraesCS7A01G149900 chr2D 94.636 261 12 1 507 765 541547548 541547288 1.480000e-108 403.0
31 TraesCS7A01G149900 chr4A 95.181 249 12 0 517 765 615435279 615435031 8.890000e-106 394.0
32 TraesCS7A01G149900 chr4A 100.000 183 0 0 2510 2692 590600763 590600581 4.230000e-89 339.0
33 TraesCS7A01G149900 chr4A 99.451 182 1 0 2511 2692 86932719 86932538 7.070000e-87 331.0
34 TraesCS7A01G149900 chr4A 95.082 183 7 2 2511 2692 734432247 734432066 1.550000e-73 287.0
35 TraesCS7A01G149900 chr2B 94.141 256 15 0 507 762 5367445 5367700 1.150000e-104 390.0
36 TraesCS7A01G149900 chr5B 93.798 258 16 0 505 762 198381777 198382034 4.140000e-104 388.0
37 TraesCS7A01G149900 chr5B 98.907 183 2 0 2511 2693 429095934 429095752 9.150000e-86 327.0
38 TraesCS7A01G149900 chr6A 92.857 266 16 2 500 762 55267055 55267320 1.930000e-102 383.0
39 TraesCS7A01G149900 chr5A 100.000 183 0 0 2511 2693 57441533 57441715 4.230000e-89 339.0
40 TraesCS7A01G149900 chr5A 98.901 182 2 0 2511 2692 707234908 707234727 3.290000e-85 326.0
41 TraesCS7A01G149900 chr4B 96.133 181 6 1 2513 2692 633753039 633753219 9.280000e-76 294.0
42 TraesCS7A01G149900 chr4B 93.023 43 2 1 3110 3151 633151814 633151856 1.020000e-05 62.1
43 TraesCS7A01G149900 chr2A 96.133 181 4 3 2511 2690 753086945 753087123 3.340000e-75 292.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G149900 chr7A 103070377 103073795 3418 True 6314.000000 6314 100.00000 1 3419 1 chr7A.!!$R1 3418
1 TraesCS7A01G149900 chr7A 103114560 103115834 1274 False 1208.000000 1208 83.90100 1018 2298 1 chr7A.!!$F1 1280
2 TraesCS7A01G149900 chr7D 100306373 100310311 3938 False 1559.000000 2296 92.32600 966 3349 2 chr7D.!!$F4 2383
3 TraesCS7A01G149900 chr7D 100986454 100987730 1276 False 1212.000000 1212 83.92600 1016 2298 1 chr7D.!!$F1 1282
4 TraesCS7A01G149900 chr7D 100938790 100941498 2708 True 872.500000 2608 90.58775 100 3419 4 chr7D.!!$R2 3319
5 TraesCS7A01G149900 chr7B 57268056 57269333 1277 False 1225.000000 1225 84.06800 1016 2299 1 chr7B.!!$F3 1283
6 TraesCS7A01G149900 chr7B 57062912 57067414 4502 True 814.500000 2362 89.61275 813 3349 4 chr7B.!!$R2 2536
7 TraesCS7A01G149900 chr7B 56388544 56390435 1891 False 789.933333 2106 94.44500 465 2409 3 chr7B.!!$F5 1944
8 TraesCS7A01G149900 chr7B 56455997 56456518 521 False 630.000000 630 88.88900 2841 3349 1 chr7B.!!$F2 508
9 TraesCS7A01G149900 chr6B 11173259 11174548 1289 True 1205.000000 1205 83.57700 1023 2315 1 chr6B.!!$R1 1292
10 TraesCS7A01G149900 chr3D 428532629 428533898 1269 False 1149.000000 1149 83.12600 1023 2298 1 chr3D.!!$F2 1275

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
997 1018 0.032815 TCCATGCAACGAACGTCAGA 59.967 50.0 0.0 0.0 0.0 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2890 7054 0.034186 AACCGTCCATGTGGCATGAT 60.034 50.0 10.34 0.0 34.44 2.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.489792 AGGCTGATATGTTATTGGATCGT 57.510 39.130 0.00 0.00 0.00 3.73
26 27 5.240891 AGGCTGATATGTTATTGGATCGTG 58.759 41.667 0.00 0.00 0.00 4.35
27 28 4.393062 GGCTGATATGTTATTGGATCGTGG 59.607 45.833 0.00 0.00 0.00 4.94
28 29 4.393062 GCTGATATGTTATTGGATCGTGGG 59.607 45.833 0.00 0.00 0.00 4.61
29 30 5.551233 CTGATATGTTATTGGATCGTGGGT 58.449 41.667 0.00 0.00 0.00 4.51
30 31 5.935945 TGATATGTTATTGGATCGTGGGTT 58.064 37.500 0.00 0.00 0.00 4.11
31 32 5.762711 TGATATGTTATTGGATCGTGGGTTG 59.237 40.000 0.00 0.00 0.00 3.77
32 33 2.717390 TGTTATTGGATCGTGGGTTGG 58.283 47.619 0.00 0.00 0.00 3.77
33 34 2.040545 TGTTATTGGATCGTGGGTTGGT 59.959 45.455 0.00 0.00 0.00 3.67
34 35 2.681344 GTTATTGGATCGTGGGTTGGTC 59.319 50.000 0.00 0.00 0.00 4.02
35 36 0.392461 ATTGGATCGTGGGTTGGTCG 60.392 55.000 0.00 0.00 0.00 4.79
36 37 1.473497 TTGGATCGTGGGTTGGTCGA 61.473 55.000 0.00 0.00 37.96 4.20
37 38 1.261938 TGGATCGTGGGTTGGTCGAT 61.262 55.000 0.00 0.00 44.98 3.59
38 39 0.107848 GGATCGTGGGTTGGTCGATT 60.108 55.000 0.00 0.00 42.91 3.34
39 40 1.677820 GGATCGTGGGTTGGTCGATTT 60.678 52.381 0.00 0.00 42.91 2.17
40 41 2.081462 GATCGTGGGTTGGTCGATTTT 58.919 47.619 0.00 0.00 42.91 1.82
41 42 1.231221 TCGTGGGTTGGTCGATTTTG 58.769 50.000 0.00 0.00 0.00 2.44
42 43 0.386731 CGTGGGTTGGTCGATTTTGC 60.387 55.000 0.00 0.00 0.00 3.68
43 44 0.671251 GTGGGTTGGTCGATTTTGCA 59.329 50.000 0.00 0.00 0.00 4.08
44 45 0.958091 TGGGTTGGTCGATTTTGCAG 59.042 50.000 0.00 0.00 0.00 4.41
45 46 1.243902 GGGTTGGTCGATTTTGCAGA 58.756 50.000 0.00 0.00 0.00 4.26
46 47 1.818674 GGGTTGGTCGATTTTGCAGAT 59.181 47.619 0.00 0.00 0.00 2.90
47 48 2.159379 GGGTTGGTCGATTTTGCAGATC 60.159 50.000 0.00 2.87 0.00 2.75
48 49 2.487762 GGTTGGTCGATTTTGCAGATCA 59.512 45.455 11.30 0.00 0.00 2.92
49 50 3.057596 GGTTGGTCGATTTTGCAGATCAA 60.058 43.478 11.30 4.19 33.19 2.57
50 51 4.161333 GTTGGTCGATTTTGCAGATCAAG 58.839 43.478 11.30 0.00 35.91 3.02
51 52 2.749076 TGGTCGATTTTGCAGATCAAGG 59.251 45.455 11.30 0.00 35.84 3.61
52 53 3.009723 GGTCGATTTTGCAGATCAAGGA 58.990 45.455 11.30 0.00 35.84 3.36
53 54 3.064545 GGTCGATTTTGCAGATCAAGGAG 59.935 47.826 11.30 0.00 35.84 3.69
54 55 3.935203 GTCGATTTTGCAGATCAAGGAGA 59.065 43.478 11.30 0.05 35.84 3.71
55 56 4.393062 GTCGATTTTGCAGATCAAGGAGAA 59.607 41.667 11.30 0.00 35.84 2.87
56 57 5.003160 TCGATTTTGCAGATCAAGGAGAAA 58.997 37.500 11.30 0.00 35.84 2.52
57 58 5.473162 TCGATTTTGCAGATCAAGGAGAAAA 59.527 36.000 11.30 0.00 35.84 2.29
58 59 6.016360 TCGATTTTGCAGATCAAGGAGAAAAA 60.016 34.615 11.30 0.00 35.84 1.94
77 78 4.796038 AAAAAGAGAGGCAATGATGGTG 57.204 40.909 0.00 0.00 0.00 4.17
78 79 2.431954 AAGAGAGGCAATGATGGTGG 57.568 50.000 0.00 0.00 0.00 4.61
79 80 0.549950 AGAGAGGCAATGATGGTGGG 59.450 55.000 0.00 0.00 0.00 4.61
80 81 0.466922 GAGAGGCAATGATGGTGGGG 60.467 60.000 0.00 0.00 0.00 4.96
81 82 1.456331 GAGGCAATGATGGTGGGGG 60.456 63.158 0.00 0.00 0.00 5.40
82 83 3.156556 GGCAATGATGGTGGGGGC 61.157 66.667 0.00 0.00 0.00 5.80
83 84 2.364056 GCAATGATGGTGGGGGCA 60.364 61.111 0.00 0.00 0.00 5.36
84 85 1.988956 GCAATGATGGTGGGGGCAA 60.989 57.895 0.00 0.00 0.00 4.52
85 86 1.963464 GCAATGATGGTGGGGGCAAG 61.963 60.000 0.00 0.00 0.00 4.01
86 87 0.324552 CAATGATGGTGGGGGCAAGA 60.325 55.000 0.00 0.00 0.00 3.02
87 88 0.324645 AATGATGGTGGGGGCAAGAC 60.325 55.000 0.00 0.00 0.00 3.01
88 89 1.217057 ATGATGGTGGGGGCAAGACT 61.217 55.000 0.00 0.00 0.00 3.24
89 90 1.384191 GATGGTGGGGGCAAGACTT 59.616 57.895 0.00 0.00 0.00 3.01
90 91 0.681243 GATGGTGGGGGCAAGACTTC 60.681 60.000 0.00 0.00 0.00 3.01
91 92 1.142688 ATGGTGGGGGCAAGACTTCT 61.143 55.000 0.00 0.00 0.00 2.85
92 93 1.360393 TGGTGGGGGCAAGACTTCTT 61.360 55.000 0.00 0.00 36.45 2.52
93 94 0.696501 GGTGGGGGCAAGACTTCTTA 59.303 55.000 0.00 0.00 34.28 2.10
94 95 1.074889 GGTGGGGGCAAGACTTCTTAA 59.925 52.381 0.00 0.00 34.28 1.85
95 96 2.437413 GTGGGGGCAAGACTTCTTAAG 58.563 52.381 0.00 0.00 34.28 1.85
96 97 1.271926 TGGGGGCAAGACTTCTTAAGC 60.272 52.381 0.00 0.00 34.28 3.09
97 98 1.271926 GGGGGCAAGACTTCTTAAGCA 60.272 52.381 0.00 0.00 34.28 3.91
98 99 2.514803 GGGGCAAGACTTCTTAAGCAA 58.485 47.619 0.00 0.00 34.28 3.91
142 143 3.022287 GCATGGATGGCGTAACGG 58.978 61.111 0.00 0.00 0.00 4.44
143 144 2.542907 GCATGGATGGCGTAACGGG 61.543 63.158 0.00 0.00 0.00 5.28
151 152 0.971959 TGGCGTAACGGGGTCTACAT 60.972 55.000 0.00 0.00 0.00 2.29
156 157 1.206371 GTAACGGGGTCTACATGCTGT 59.794 52.381 0.00 0.00 0.00 4.40
169 170 6.785488 CTACATGCTGTAGTGAACAAAAGA 57.215 37.500 12.51 0.00 43.93 2.52
170 171 7.369803 CTACATGCTGTAGTGAACAAAAGAT 57.630 36.000 12.51 0.00 43.93 2.40
184 185 9.171877 GTGAACAAAAGATAAGAAGATGATCCT 57.828 33.333 0.00 0.00 0.00 3.24
195 196 3.996921 AGATGATCCTGTGAAGCTGTT 57.003 42.857 0.00 0.00 0.00 3.16
197 198 4.008330 AGATGATCCTGTGAAGCTGTTTG 58.992 43.478 0.00 0.00 0.00 2.93
201 202 4.036734 TGATCCTGTGAAGCTGTTTGTTTC 59.963 41.667 0.00 0.00 36.58 2.78
251 252 7.593875 TCATTTTATGTTTGTATGCCTTTGC 57.406 32.000 0.00 0.00 38.26 3.68
286 287 1.671845 GGTCTAGCGATGTCGTCTCTT 59.328 52.381 4.20 0.00 42.22 2.85
327 328 2.034607 GGATCGTCCCCTCGAGAAG 58.965 63.158 15.71 4.51 43.00 2.85
333 334 1.984570 TCCCCTCGAGAAGTGGCAG 60.985 63.158 15.71 0.00 32.31 4.85
342 343 2.508526 GAGAAGTGGCAGATGTTTGGT 58.491 47.619 0.00 0.00 0.00 3.67
350 353 0.609131 CAGATGTTTGGTCGGGCCTT 60.609 55.000 0.84 0.00 38.35 4.35
353 356 1.178534 ATGTTTGGTCGGGCCTTGTG 61.179 55.000 0.84 0.00 38.35 3.33
356 359 1.706995 TTTGGTCGGGCCTTGTGGTA 61.707 55.000 0.84 0.00 38.35 3.25
397 400 5.121925 TGTTTACGTTTGTGCAGTAGTTTGA 59.878 36.000 0.00 0.00 0.00 2.69
403 406 6.073765 ACGTTTGTGCAGTAGTTTGATCTTAG 60.074 38.462 0.00 0.00 0.00 2.18
406 409 6.109156 TGTGCAGTAGTTTGATCTTAGGAA 57.891 37.500 0.00 0.00 0.00 3.36
410 413 7.173390 GTGCAGTAGTTTGATCTTAGGAAAACT 59.827 37.037 10.39 10.39 43.38 2.66
433 436 7.452562 ACTGCATGGTTTCTTTAATGGAAATT 58.547 30.769 0.00 0.00 35.55 1.82
440 443 7.291182 TGGTTTCTTTAATGGAAATTGGAAGGA 59.709 33.333 7.18 0.00 35.55 3.36
461 464 6.800890 AGGAAGGCCCTTCTTCTATTAAAAA 58.199 36.000 22.35 0.00 44.85 1.94
502 505 9.244799 CTGAAAACTTATTTTGGGTAAGTCAAC 57.755 33.333 0.00 0.00 40.49 3.18
562 565 3.621419 CCAAAGGGGCAGATCCAAT 57.379 52.632 0.00 0.00 36.21 3.16
563 566 1.870064 CCAAAGGGGCAGATCCAATT 58.130 50.000 0.00 0.00 36.21 2.32
564 567 3.030873 CCAAAGGGGCAGATCCAATTA 57.969 47.619 0.00 0.00 36.21 1.40
565 568 3.373830 CCAAAGGGGCAGATCCAATTAA 58.626 45.455 0.00 0.00 36.21 1.40
566 569 3.969312 CCAAAGGGGCAGATCCAATTAAT 59.031 43.478 0.00 0.00 36.21 1.40
567 570 4.039609 CCAAAGGGGCAGATCCAATTAATC 59.960 45.833 0.00 0.00 36.21 1.75
568 571 4.821532 AAGGGGCAGATCCAATTAATCT 57.178 40.909 0.00 0.00 36.21 2.40
569 572 4.379302 AGGGGCAGATCCAATTAATCTC 57.621 45.455 0.62 0.00 36.21 2.75
570 573 3.077359 GGGGCAGATCCAATTAATCTCG 58.923 50.000 0.62 0.00 36.21 4.04
571 574 3.077359 GGGCAGATCCAATTAATCTCGG 58.923 50.000 0.62 0.00 36.21 4.63
572 575 2.485814 GGCAGATCCAATTAATCTCGGC 59.514 50.000 0.62 2.99 31.05 5.54
573 576 3.406764 GCAGATCCAATTAATCTCGGCT 58.593 45.455 0.62 0.00 31.05 5.52
574 577 4.563580 GGCAGATCCAATTAATCTCGGCTA 60.564 45.833 9.98 0.00 31.05 3.93
575 578 5.181748 GCAGATCCAATTAATCTCGGCTAT 58.818 41.667 0.62 0.00 31.05 2.97
576 579 5.293079 GCAGATCCAATTAATCTCGGCTATC 59.707 44.000 0.62 0.00 31.05 2.08
577 580 6.401394 CAGATCCAATTAATCTCGGCTATCA 58.599 40.000 0.62 0.00 31.05 2.15
578 581 6.875726 CAGATCCAATTAATCTCGGCTATCAA 59.124 38.462 0.62 0.00 31.05 2.57
579 582 7.388776 CAGATCCAATTAATCTCGGCTATCAAA 59.611 37.037 0.62 0.00 31.05 2.69
580 583 8.105829 AGATCCAATTAATCTCGGCTATCAAAT 58.894 33.333 0.00 0.00 0.00 2.32
581 584 7.672983 TCCAATTAATCTCGGCTATCAAATC 57.327 36.000 0.00 0.00 0.00 2.17
582 585 7.223584 TCCAATTAATCTCGGCTATCAAATCA 58.776 34.615 0.00 0.00 0.00 2.57
583 586 7.884877 TCCAATTAATCTCGGCTATCAAATCAT 59.115 33.333 0.00 0.00 0.00 2.45
584 587 7.966753 CCAATTAATCTCGGCTATCAAATCATG 59.033 37.037 0.00 0.00 0.00 3.07
585 588 8.509690 CAATTAATCTCGGCTATCAAATCATGT 58.490 33.333 0.00 0.00 0.00 3.21
586 589 7.658179 TTAATCTCGGCTATCAAATCATGTC 57.342 36.000 0.00 0.00 0.00 3.06
587 590 4.670896 TCTCGGCTATCAAATCATGTCA 57.329 40.909 0.00 0.00 0.00 3.58
588 591 5.022282 TCTCGGCTATCAAATCATGTCAA 57.978 39.130 0.00 0.00 0.00 3.18
589 592 5.614308 TCTCGGCTATCAAATCATGTCAAT 58.386 37.500 0.00 0.00 0.00 2.57
590 593 5.698089 TCTCGGCTATCAAATCATGTCAATC 59.302 40.000 0.00 0.00 0.00 2.67
591 594 4.756642 TCGGCTATCAAATCATGTCAATCC 59.243 41.667 0.00 0.00 0.00 3.01
592 595 4.516321 CGGCTATCAAATCATGTCAATCCA 59.484 41.667 0.00 0.00 0.00 3.41
593 596 5.008911 CGGCTATCAAATCATGTCAATCCAA 59.991 40.000 0.00 0.00 0.00 3.53
594 597 6.211515 GGCTATCAAATCATGTCAATCCAAC 58.788 40.000 0.00 0.00 0.00 3.77
595 598 5.911280 GCTATCAAATCATGTCAATCCAACG 59.089 40.000 0.00 0.00 0.00 4.10
596 599 6.238456 GCTATCAAATCATGTCAATCCAACGA 60.238 38.462 0.00 0.00 0.00 3.85
597 600 5.295431 TCAAATCATGTCAATCCAACGAC 57.705 39.130 0.00 0.00 0.00 4.34
598 601 4.155826 TCAAATCATGTCAATCCAACGACC 59.844 41.667 0.00 0.00 0.00 4.79
599 602 3.634397 ATCATGTCAATCCAACGACCT 57.366 42.857 0.00 0.00 0.00 3.85
600 603 4.753516 ATCATGTCAATCCAACGACCTA 57.246 40.909 0.00 0.00 0.00 3.08
601 604 4.123497 TCATGTCAATCCAACGACCTAG 57.877 45.455 0.00 0.00 0.00 3.02
602 605 3.767131 TCATGTCAATCCAACGACCTAGA 59.233 43.478 0.00 0.00 0.00 2.43
603 606 3.587797 TGTCAATCCAACGACCTAGAC 57.412 47.619 0.00 0.00 0.00 2.59
604 607 3.162666 TGTCAATCCAACGACCTAGACT 58.837 45.455 0.00 0.00 0.00 3.24
605 608 3.056821 TGTCAATCCAACGACCTAGACTG 60.057 47.826 0.00 0.00 0.00 3.51
606 609 3.056749 GTCAATCCAACGACCTAGACTGT 60.057 47.826 0.00 0.00 0.00 3.55
607 610 3.576982 TCAATCCAACGACCTAGACTGTT 59.423 43.478 0.00 0.00 0.00 3.16
608 611 4.039973 TCAATCCAACGACCTAGACTGTTT 59.960 41.667 0.00 0.00 0.00 2.83
609 612 3.655276 TCCAACGACCTAGACTGTTTC 57.345 47.619 0.00 0.00 0.00 2.78
610 613 2.960384 TCCAACGACCTAGACTGTTTCA 59.040 45.455 0.00 0.00 0.00 2.69
611 614 3.385433 TCCAACGACCTAGACTGTTTCAA 59.615 43.478 0.00 0.00 0.00 2.69
612 615 4.039973 TCCAACGACCTAGACTGTTTCAAT 59.960 41.667 0.00 0.00 0.00 2.57
613 616 4.152402 CCAACGACCTAGACTGTTTCAATG 59.848 45.833 0.00 0.00 0.00 2.82
614 617 4.602340 ACGACCTAGACTGTTTCAATGT 57.398 40.909 0.00 0.00 0.00 2.71
615 618 4.557205 ACGACCTAGACTGTTTCAATGTC 58.443 43.478 0.00 0.00 0.00 3.06
616 619 3.608506 CGACCTAGACTGTTTCAATGTCG 59.391 47.826 0.00 0.00 35.56 4.35
617 620 4.615223 CGACCTAGACTGTTTCAATGTCGA 60.615 45.833 0.00 0.00 40.27 4.20
618 621 4.810790 ACCTAGACTGTTTCAATGTCGAG 58.189 43.478 0.00 0.00 36.01 4.04
619 622 3.614616 CCTAGACTGTTTCAATGTCGAGC 59.385 47.826 0.00 0.00 33.95 5.03
620 623 2.061773 AGACTGTTTCAATGTCGAGCG 58.938 47.619 0.00 0.00 36.01 5.03
621 624 0.512952 ACTGTTTCAATGTCGAGCGC 59.487 50.000 0.00 0.00 0.00 5.92
622 625 0.792640 CTGTTTCAATGTCGAGCGCT 59.207 50.000 11.27 11.27 0.00 5.92
623 626 0.790207 TGTTTCAATGTCGAGCGCTC 59.210 50.000 27.64 27.64 0.00 5.03
624 627 0.790207 GTTTCAATGTCGAGCGCTCA 59.210 50.000 34.69 18.66 0.00 4.26
625 628 1.194547 GTTTCAATGTCGAGCGCTCAA 59.805 47.619 34.69 17.41 0.00 3.02
626 629 0.790207 TTCAATGTCGAGCGCTCAAC 59.210 50.000 34.69 28.50 0.00 3.18
627 630 0.319469 TCAATGTCGAGCGCTCAACA 60.319 50.000 31.47 31.47 0.00 3.33
628 631 0.179240 CAATGTCGAGCGCTCAACAC 60.179 55.000 31.93 24.81 0.00 3.32
629 632 1.617755 AATGTCGAGCGCTCAACACG 61.618 55.000 31.93 20.44 0.00 4.49
630 633 2.729862 GTCGAGCGCTCAACACGT 60.730 61.111 34.69 0.00 0.00 4.49
631 634 2.027024 TCGAGCGCTCAACACGTT 59.973 55.556 34.69 0.00 0.00 3.99
632 635 1.590525 TCGAGCGCTCAACACGTTT 60.591 52.632 34.69 0.00 0.00 3.60
633 636 0.318022 TCGAGCGCTCAACACGTTTA 60.318 50.000 34.69 4.78 0.00 2.01
634 637 0.091344 CGAGCGCTCAACACGTTTAG 59.909 55.000 34.69 12.34 0.00 1.85
635 638 0.179248 GAGCGCTCAACACGTTTAGC 60.179 55.000 31.91 6.11 36.68 3.09
650 653 5.983790 CGTTTAGCGTGCAATTAATTTCA 57.016 34.783 0.00 0.00 35.54 2.69
651 654 6.553255 CGTTTAGCGTGCAATTAATTTCAT 57.447 33.333 3.83 0.00 35.54 2.57
652 655 6.394076 CGTTTAGCGTGCAATTAATTTCATG 58.606 36.000 13.68 13.68 35.54 3.07
653 656 5.947503 TTAGCGTGCAATTAATTTCATGC 57.052 34.783 27.36 27.36 40.63 4.06
654 657 3.189285 AGCGTGCAATTAATTTCATGCC 58.811 40.909 29.45 17.78 41.08 4.40
655 658 2.928757 GCGTGCAATTAATTTCATGCCA 59.071 40.909 25.48 6.03 38.00 4.92
656 659 3.370366 GCGTGCAATTAATTTCATGCCAA 59.630 39.130 25.48 0.99 38.00 4.52
657 660 4.142945 GCGTGCAATTAATTTCATGCCAAA 60.143 37.500 25.48 0.38 38.00 3.28
658 661 5.447548 GCGTGCAATTAATTTCATGCCAAAT 60.448 36.000 25.48 0.00 38.00 2.32
659 662 6.238049 GCGTGCAATTAATTTCATGCCAAATA 60.238 34.615 25.48 0.00 38.00 1.40
660 663 7.518689 GCGTGCAATTAATTTCATGCCAAATAT 60.519 33.333 25.48 0.00 38.00 1.28
661 664 8.976471 CGTGCAATTAATTTCATGCCAAATATA 58.024 29.630 7.04 0.00 38.00 0.86
713 716 9.712305 ATAATATCCTACTTAATATCCGCATGC 57.288 33.333 7.91 7.91 0.00 4.06
714 717 4.882842 TCCTACTTAATATCCGCATGCA 57.117 40.909 19.57 0.00 0.00 3.96
715 718 4.566004 TCCTACTTAATATCCGCATGCAC 58.434 43.478 19.57 0.00 0.00 4.57
716 719 4.283467 TCCTACTTAATATCCGCATGCACT 59.717 41.667 19.57 3.59 0.00 4.40
717 720 4.997395 CCTACTTAATATCCGCATGCACTT 59.003 41.667 19.57 3.39 0.00 3.16
718 721 6.014925 TCCTACTTAATATCCGCATGCACTTA 60.015 38.462 19.57 5.72 0.00 2.24
719 722 6.649141 CCTACTTAATATCCGCATGCACTTAA 59.351 38.462 19.57 11.55 0.00 1.85
720 723 7.334421 CCTACTTAATATCCGCATGCACTTAAT 59.666 37.037 19.57 5.58 0.00 1.40
721 724 9.366216 CTACTTAATATCCGCATGCACTTAATA 57.634 33.333 19.57 7.60 0.00 0.98
722 725 8.792830 ACTTAATATCCGCATGCACTTAATAT 57.207 30.769 19.57 9.48 0.00 1.28
723 726 9.884636 ACTTAATATCCGCATGCACTTAATATA 57.115 29.630 19.57 4.53 0.00 0.86
725 728 9.884636 TTAATATCCGCATGCACTTAATATACT 57.115 29.630 19.57 2.37 0.00 2.12
726 729 8.792830 AATATCCGCATGCACTTAATATACTT 57.207 30.769 19.57 0.00 0.00 2.24
727 730 8.792830 ATATCCGCATGCACTTAATATACTTT 57.207 30.769 19.57 0.00 0.00 2.66
728 731 6.299023 TCCGCATGCACTTAATATACTTTG 57.701 37.500 19.57 0.00 0.00 2.77
729 732 6.052360 TCCGCATGCACTTAATATACTTTGA 58.948 36.000 19.57 0.00 0.00 2.69
730 733 6.540551 TCCGCATGCACTTAATATACTTTGAA 59.459 34.615 19.57 0.00 0.00 2.69
731 734 7.066404 TCCGCATGCACTTAATATACTTTGAAA 59.934 33.333 19.57 0.00 0.00 2.69
732 735 7.862372 CCGCATGCACTTAATATACTTTGAAAT 59.138 33.333 19.57 0.00 0.00 2.17
733 736 9.236691 CGCATGCACTTAATATACTTTGAAATT 57.763 29.630 19.57 0.00 0.00 1.82
745 748 5.574815 ACTTTGAAATTAACGTGCATTGC 57.425 34.783 0.46 0.46 0.00 3.56
746 749 5.046529 ACTTTGAAATTAACGTGCATTGCA 58.953 33.333 7.38 7.38 35.60 4.08
757 760 2.328655 TGCATTGCACGTACACATTG 57.671 45.000 7.38 0.00 31.71 2.82
758 761 1.876156 TGCATTGCACGTACACATTGA 59.124 42.857 7.38 0.00 31.71 2.57
759 762 2.241722 GCATTGCACGTACACATTGAC 58.758 47.619 3.15 1.49 0.00 3.18
760 763 2.095768 GCATTGCACGTACACATTGACT 60.096 45.455 3.15 0.00 0.00 3.41
761 764 3.124466 GCATTGCACGTACACATTGACTA 59.876 43.478 3.15 0.00 0.00 2.59
922 934 1.679139 GCCTATAGCACATGCAACCA 58.321 50.000 6.64 0.00 45.16 3.67
995 1016 1.196581 CAATCCATGCAACGAACGTCA 59.803 47.619 0.00 0.00 0.00 4.35
996 1017 1.078709 ATCCATGCAACGAACGTCAG 58.921 50.000 0.00 0.00 0.00 3.51
997 1018 0.032815 TCCATGCAACGAACGTCAGA 59.967 50.000 0.00 0.00 0.00 3.27
998 1019 0.163788 CCATGCAACGAACGTCAGAC 59.836 55.000 0.00 0.00 0.00 3.51
1000 1021 0.318360 ATGCAACGAACGTCAGACGA 60.318 50.000 29.53 4.48 46.05 4.20
1001 1022 0.318360 TGCAACGAACGTCAGACGAT 60.318 50.000 29.53 18.35 46.05 3.73
1288 1551 2.431771 TTCATCACGTCCACGCCG 60.432 61.111 0.00 0.00 44.43 6.46
1439 1702 1.526225 GCATTCCCGAAGTAGCCCC 60.526 63.158 0.00 0.00 0.00 5.80
1690 1953 2.202756 GGCTCCGGCTTGTACTCG 60.203 66.667 0.00 0.00 38.73 4.18
2108 2377 3.771160 CGGCCAGCGGGTAGAACT 61.771 66.667 2.24 0.00 36.17 3.01
2299 2571 0.820482 TCTCCGTCGACAACACCTGA 60.820 55.000 17.16 0.66 0.00 3.86
2329 2601 0.667453 TTGTGTGCCTCGTGTACGTA 59.333 50.000 4.20 0.00 40.80 3.57
2330 2602 0.040157 TGTGTGCCTCGTGTACGTAC 60.040 55.000 18.90 18.90 40.80 3.67
2331 2603 1.061799 GTGTGCCTCGTGTACGTACG 61.062 60.000 20.18 15.01 44.98 3.67
2332 2604 1.207593 GTGCCTCGTGTACGTACGT 59.792 57.895 25.98 25.98 44.06 3.57
2348 2620 3.609644 CGTACGTGTCTCTTGCTCTCTTT 60.610 47.826 7.22 0.00 0.00 2.52
2349 2621 3.460857 ACGTGTCTCTTGCTCTCTTTT 57.539 42.857 0.00 0.00 0.00 2.27
2350 2622 3.126831 ACGTGTCTCTTGCTCTCTTTTG 58.873 45.455 0.00 0.00 0.00 2.44
2351 2623 3.126831 CGTGTCTCTTGCTCTCTTTTGT 58.873 45.455 0.00 0.00 0.00 2.83
2352 2624 3.060003 CGTGTCTCTTGCTCTCTTTTGTG 60.060 47.826 0.00 0.00 0.00 3.33
2353 2625 2.874701 TGTCTCTTGCTCTCTTTTGTGC 59.125 45.455 0.00 0.00 0.00 4.57
2501 4531 3.479866 CGAATAAAGCGAAGTCGTCACAC 60.480 47.826 2.25 0.00 42.22 3.82
2510 4540 4.371882 CGAAGTCGTCACACGTAAAATTC 58.628 43.478 0.00 0.00 43.14 2.17
2514 4544 1.192757 CGTCACACGTAAAATTCGGCA 59.807 47.619 0.00 0.00 36.74 5.69
2515 4545 2.348685 CGTCACACGTAAAATTCGGCAA 60.349 45.455 0.00 0.00 36.74 4.52
2517 4547 3.602062 GTCACACGTAAAATTCGGCAATG 59.398 43.478 0.00 0.00 0.00 2.82
2518 4548 2.341168 CACACGTAAAATTCGGCAATGC 59.659 45.455 0.00 0.00 0.00 3.56
2519 4549 2.227865 ACACGTAAAATTCGGCAATGCT 59.772 40.909 4.82 0.00 0.00 3.79
2521 4551 4.028383 CACGTAAAATTCGGCAATGCTAG 58.972 43.478 4.82 0.00 0.00 3.42
2522 4552 3.936453 ACGTAAAATTCGGCAATGCTAGA 59.064 39.130 4.82 2.30 0.00 2.43
2523 4553 4.201783 ACGTAAAATTCGGCAATGCTAGAC 60.202 41.667 4.82 0.00 0.00 2.59
2524 4554 3.405170 AAAATTCGGCAATGCTAGACG 57.595 42.857 4.82 0.00 0.00 4.18
2525 4555 2.024176 AATTCGGCAATGCTAGACGT 57.976 45.000 4.82 0.00 0.00 4.34
2526 4556 2.882927 ATTCGGCAATGCTAGACGTA 57.117 45.000 4.82 0.00 0.00 3.57
2527 4557 1.917273 TTCGGCAATGCTAGACGTAC 58.083 50.000 4.82 0.00 0.00 3.67
2528 4558 0.248336 TCGGCAATGCTAGACGTACG 60.248 55.000 15.01 15.01 0.00 3.67
2529 4559 1.206745 CGGCAATGCTAGACGTACGG 61.207 60.000 21.06 2.24 0.00 4.02
2530 4560 0.101759 GGCAATGCTAGACGTACGGA 59.898 55.000 21.06 3.34 0.00 4.69
2531 4561 1.478137 GCAATGCTAGACGTACGGAG 58.522 55.000 21.06 14.21 0.00 4.63
2532 4562 1.864435 GCAATGCTAGACGTACGGAGG 60.864 57.143 21.06 7.73 0.00 4.30
2533 4563 0.384669 AATGCTAGACGTACGGAGGC 59.615 55.000 21.06 17.10 0.00 4.70
2534 4564 0.465824 ATGCTAGACGTACGGAGGCT 60.466 55.000 21.06 12.98 0.00 4.58
2535 4565 0.679002 TGCTAGACGTACGGAGGCTT 60.679 55.000 21.06 0.00 0.00 4.35
2536 4566 0.455005 GCTAGACGTACGGAGGCTTT 59.545 55.000 21.06 0.00 0.00 3.51
2537 4567 1.672881 GCTAGACGTACGGAGGCTTTA 59.327 52.381 21.06 0.00 0.00 1.85
2538 4568 2.540565 GCTAGACGTACGGAGGCTTTAC 60.541 54.545 21.06 0.00 0.00 2.01
2539 4569 1.538047 AGACGTACGGAGGCTTTACA 58.462 50.000 21.06 0.00 0.00 2.41
2540 4570 1.471684 AGACGTACGGAGGCTTTACAG 59.528 52.381 21.06 0.00 0.00 2.74
2541 4571 0.529378 ACGTACGGAGGCTTTACAGG 59.471 55.000 21.06 0.00 0.00 4.00
2542 4572 0.813184 CGTACGGAGGCTTTACAGGA 59.187 55.000 7.57 0.00 0.00 3.86
2543 4573 1.468736 CGTACGGAGGCTTTACAGGAC 60.469 57.143 7.57 0.00 0.00 3.85
2544 4574 1.823610 GTACGGAGGCTTTACAGGACT 59.176 52.381 0.00 0.00 0.00 3.85
2545 4575 1.349067 ACGGAGGCTTTACAGGACTT 58.651 50.000 0.00 0.00 0.00 3.01
2546 4576 1.697982 ACGGAGGCTTTACAGGACTTT 59.302 47.619 0.00 0.00 0.00 2.66
2547 4577 2.105993 ACGGAGGCTTTACAGGACTTTT 59.894 45.455 0.00 0.00 0.00 2.27
2548 4578 3.325716 ACGGAGGCTTTACAGGACTTTTA 59.674 43.478 0.00 0.00 0.00 1.52
2549 4579 3.683340 CGGAGGCTTTACAGGACTTTTAC 59.317 47.826 0.00 0.00 0.00 2.01
2550 4580 4.648651 GGAGGCTTTACAGGACTTTTACA 58.351 43.478 0.00 0.00 0.00 2.41
2551 4581 4.695928 GGAGGCTTTACAGGACTTTTACAG 59.304 45.833 0.00 0.00 0.00 2.74
2552 4582 4.652822 AGGCTTTACAGGACTTTTACAGG 58.347 43.478 0.00 0.00 0.00 4.00
2553 4583 3.190744 GGCTTTACAGGACTTTTACAGGC 59.809 47.826 0.00 0.00 0.00 4.85
2554 4584 3.818773 GCTTTACAGGACTTTTACAGGCA 59.181 43.478 0.00 0.00 27.54 4.75
2555 4585 4.277423 GCTTTACAGGACTTTTACAGGCAA 59.723 41.667 0.00 0.00 27.54 4.52
2556 4586 5.048013 GCTTTACAGGACTTTTACAGGCAAT 60.048 40.000 0.00 0.00 27.54 3.56
2557 4587 5.957842 TTACAGGACTTTTACAGGCAATG 57.042 39.130 0.00 0.00 27.54 2.82
2558 4588 2.558359 ACAGGACTTTTACAGGCAATGC 59.442 45.455 0.00 0.00 27.54 3.56
2559 4589 2.821969 CAGGACTTTTACAGGCAATGCT 59.178 45.455 4.82 0.00 27.54 3.79
2560 4590 2.821969 AGGACTTTTACAGGCAATGCTG 59.178 45.455 4.82 4.17 27.54 4.41
2561 4591 2.819608 GGACTTTTACAGGCAATGCTGA 59.180 45.455 4.82 0.00 27.54 4.26
2562 4592 3.119708 GGACTTTTACAGGCAATGCTGAG 60.120 47.826 4.82 0.00 27.54 3.35
2563 4593 2.821969 ACTTTTACAGGCAATGCTGAGG 59.178 45.455 4.82 0.00 0.00 3.86
2564 4594 2.584835 TTTACAGGCAATGCTGAGGT 57.415 45.000 4.82 1.18 0.00 3.85
2565 4595 1.825090 TTACAGGCAATGCTGAGGTG 58.175 50.000 4.82 0.00 0.00 4.00
2566 4596 0.035152 TACAGGCAATGCTGAGGTGG 60.035 55.000 4.82 0.00 0.00 4.61
2567 4597 2.050350 CAGGCAATGCTGAGGTGGG 61.050 63.158 4.82 0.00 0.00 4.61
2568 4598 3.455469 GGCAATGCTGAGGTGGGC 61.455 66.667 4.82 0.00 0.00 5.36
2569 4599 2.362120 GCAATGCTGAGGTGGGCT 60.362 61.111 0.00 0.00 0.00 5.19
2570 4600 2.707849 GCAATGCTGAGGTGGGCTG 61.708 63.158 0.00 0.00 0.00 4.85
2571 4601 2.050350 CAATGCTGAGGTGGGCTGG 61.050 63.158 0.00 0.00 0.00 4.85
2572 4602 2.541907 AATGCTGAGGTGGGCTGGT 61.542 57.895 0.00 0.00 0.00 4.00
2573 4603 2.085343 AATGCTGAGGTGGGCTGGTT 62.085 55.000 0.00 0.00 0.00 3.67
2574 4604 2.085343 ATGCTGAGGTGGGCTGGTTT 62.085 55.000 0.00 0.00 0.00 3.27
2575 4605 1.378762 GCTGAGGTGGGCTGGTTTA 59.621 57.895 0.00 0.00 0.00 2.01
2576 4606 0.251165 GCTGAGGTGGGCTGGTTTAA 60.251 55.000 0.00 0.00 0.00 1.52
2577 4607 1.616994 GCTGAGGTGGGCTGGTTTAAT 60.617 52.381 0.00 0.00 0.00 1.40
2578 4608 2.807676 CTGAGGTGGGCTGGTTTAATT 58.192 47.619 0.00 0.00 0.00 1.40
2579 4609 2.493278 CTGAGGTGGGCTGGTTTAATTG 59.507 50.000 0.00 0.00 0.00 2.32
2580 4610 1.824852 GAGGTGGGCTGGTTTAATTGG 59.175 52.381 0.00 0.00 0.00 3.16
2581 4611 1.149077 AGGTGGGCTGGTTTAATTGGT 59.851 47.619 0.00 0.00 0.00 3.67
2582 4612 2.380590 AGGTGGGCTGGTTTAATTGGTA 59.619 45.455 0.00 0.00 0.00 3.25
2583 4613 3.166679 GGTGGGCTGGTTTAATTGGTAA 58.833 45.455 0.00 0.00 0.00 2.85
2584 4614 3.772572 GGTGGGCTGGTTTAATTGGTAAT 59.227 43.478 0.00 0.00 0.00 1.89
2585 4615 4.224147 GGTGGGCTGGTTTAATTGGTAATT 59.776 41.667 0.00 0.00 34.90 1.40
2586 4616 5.422650 GGTGGGCTGGTTTAATTGGTAATTA 59.577 40.000 0.00 0.00 32.38 1.40
2587 4617 6.406512 GGTGGGCTGGTTTAATTGGTAATTAG 60.407 42.308 0.00 0.00 35.00 1.73
2588 4618 6.378848 GTGGGCTGGTTTAATTGGTAATTAGA 59.621 38.462 0.00 0.00 35.00 2.10
2589 4619 7.069455 GTGGGCTGGTTTAATTGGTAATTAGAT 59.931 37.037 0.00 0.00 35.00 1.98
2590 4620 7.069331 TGGGCTGGTTTAATTGGTAATTAGATG 59.931 37.037 0.00 0.00 35.00 2.90
2591 4621 7.286775 GGGCTGGTTTAATTGGTAATTAGATGA 59.713 37.037 0.00 0.00 35.00 2.92
2592 4622 8.352942 GGCTGGTTTAATTGGTAATTAGATGAG 58.647 37.037 0.00 0.00 35.00 2.90
2593 4623 8.352942 GCTGGTTTAATTGGTAATTAGATGAGG 58.647 37.037 0.00 0.00 35.00 3.86
2594 4624 8.232913 TGGTTTAATTGGTAATTAGATGAGGC 57.767 34.615 0.00 0.00 35.00 4.70
2595 4625 7.836685 TGGTTTAATTGGTAATTAGATGAGGCA 59.163 33.333 0.00 0.00 35.00 4.75
2596 4626 8.352942 GGTTTAATTGGTAATTAGATGAGGCAG 58.647 37.037 0.00 0.00 35.00 4.85
2597 4627 8.352942 GTTTAATTGGTAATTAGATGAGGCAGG 58.647 37.037 0.00 0.00 35.00 4.85
2598 4628 3.492102 TGGTAATTAGATGAGGCAGGC 57.508 47.619 0.00 0.00 0.00 4.85
2599 4629 2.106511 TGGTAATTAGATGAGGCAGGCC 59.893 50.000 0.97 0.97 0.00 5.19
2600 4630 2.553247 GGTAATTAGATGAGGCAGGCCC 60.553 54.545 6.70 0.00 36.58 5.80
2601 4631 0.480252 AATTAGATGAGGCAGGCCCC 59.520 55.000 6.70 0.00 36.58 5.80
2602 4632 0.698886 ATTAGATGAGGCAGGCCCCA 60.699 55.000 6.70 0.77 36.58 4.96
2603 4633 1.635817 TTAGATGAGGCAGGCCCCAC 61.636 60.000 6.70 0.00 36.58 4.61
2604 4634 4.512914 GATGAGGCAGGCCCCACC 62.513 72.222 6.70 0.00 36.58 4.61
2612 4642 2.452491 AGGCCCCACCCTGAAACT 60.452 61.111 0.00 0.00 40.58 2.66
2613 4643 2.035783 GGCCCCACCCTGAAACTC 59.964 66.667 0.00 0.00 0.00 3.01
2614 4644 2.840753 GGCCCCACCCTGAAACTCA 61.841 63.158 0.00 0.00 0.00 3.41
2615 4645 1.303643 GCCCCACCCTGAAACTCAG 60.304 63.158 0.00 0.00 43.91 3.35
2635 4665 1.723288 GGGGGAGGAGATTAGTGAGG 58.277 60.000 0.00 0.00 0.00 3.86
2636 4666 1.723288 GGGGAGGAGATTAGTGAGGG 58.277 60.000 0.00 0.00 0.00 4.30
2637 4667 1.220750 GGGGAGGAGATTAGTGAGGGA 59.779 57.143 0.00 0.00 0.00 4.20
2638 4668 2.604139 GGGAGGAGATTAGTGAGGGAG 58.396 57.143 0.00 0.00 0.00 4.30
2639 4669 2.604139 GGAGGAGATTAGTGAGGGAGG 58.396 57.143 0.00 0.00 0.00 4.30
2640 4670 2.178106 GGAGGAGATTAGTGAGGGAGGA 59.822 54.545 0.00 0.00 0.00 3.71
2641 4671 3.496331 GAGGAGATTAGTGAGGGAGGAG 58.504 54.545 0.00 0.00 0.00 3.69
2642 4672 2.178984 AGGAGATTAGTGAGGGAGGAGG 59.821 54.545 0.00 0.00 0.00 4.30
2643 4673 2.604139 GAGATTAGTGAGGGAGGAGGG 58.396 57.143 0.00 0.00 0.00 4.30
2644 4674 1.940957 AGATTAGTGAGGGAGGAGGGT 59.059 52.381 0.00 0.00 0.00 4.34
2645 4675 2.319438 AGATTAGTGAGGGAGGAGGGTT 59.681 50.000 0.00 0.00 0.00 4.11
2646 4676 1.952621 TTAGTGAGGGAGGAGGGTTG 58.047 55.000 0.00 0.00 0.00 3.77
2647 4677 0.042731 TAGTGAGGGAGGAGGGTTGG 59.957 60.000 0.00 0.00 0.00 3.77
2648 4678 1.539124 GTGAGGGAGGAGGGTTGGT 60.539 63.158 0.00 0.00 0.00 3.67
2649 4679 1.229529 TGAGGGAGGAGGGTTGGTC 60.230 63.158 0.00 0.00 0.00 4.02
2650 4680 1.081277 GAGGGAGGAGGGTTGGTCT 59.919 63.158 0.00 0.00 0.00 3.85
2651 4681 1.229658 AGGGAGGAGGGTTGGTCTG 60.230 63.158 0.00 0.00 0.00 3.51
2652 4682 1.539124 GGGAGGAGGGTTGGTCTGT 60.539 63.158 0.00 0.00 0.00 3.41
2653 4683 0.252558 GGGAGGAGGGTTGGTCTGTA 60.253 60.000 0.00 0.00 0.00 2.74
2654 4684 1.652947 GGAGGAGGGTTGGTCTGTAA 58.347 55.000 0.00 0.00 0.00 2.41
2655 4685 1.982958 GGAGGAGGGTTGGTCTGTAAA 59.017 52.381 0.00 0.00 0.00 2.01
2656 4686 2.576648 GGAGGAGGGTTGGTCTGTAAAT 59.423 50.000 0.00 0.00 0.00 1.40
2657 4687 3.370633 GGAGGAGGGTTGGTCTGTAAATC 60.371 52.174 0.00 0.00 0.00 2.17
2658 4688 2.576648 AGGAGGGTTGGTCTGTAAATCC 59.423 50.000 0.00 0.00 0.00 3.01
2659 4689 2.576648 GGAGGGTTGGTCTGTAAATCCT 59.423 50.000 0.00 0.00 0.00 3.24
2660 4690 3.010250 GGAGGGTTGGTCTGTAAATCCTT 59.990 47.826 0.00 0.00 0.00 3.36
2661 4691 4.010349 GAGGGTTGGTCTGTAAATCCTTG 58.990 47.826 0.00 0.00 0.00 3.61
2662 4692 3.397955 AGGGTTGGTCTGTAAATCCTTGT 59.602 43.478 0.00 0.00 0.00 3.16
2663 4693 4.600111 AGGGTTGGTCTGTAAATCCTTGTA 59.400 41.667 0.00 0.00 0.00 2.41
2664 4694 5.073965 AGGGTTGGTCTGTAAATCCTTGTAA 59.926 40.000 0.00 0.00 0.00 2.41
2665 4695 5.771165 GGGTTGGTCTGTAAATCCTTGTAAA 59.229 40.000 0.00 0.00 0.00 2.01
2666 4696 6.265876 GGGTTGGTCTGTAAATCCTTGTAAAA 59.734 38.462 0.00 0.00 0.00 1.52
2667 4697 7.143340 GGTTGGTCTGTAAATCCTTGTAAAAC 58.857 38.462 0.00 0.00 0.00 2.43
2668 4698 7.201839 GGTTGGTCTGTAAATCCTTGTAAAACA 60.202 37.037 0.00 0.00 0.00 2.83
2669 4699 7.883391 TGGTCTGTAAATCCTTGTAAAACAA 57.117 32.000 0.00 0.00 36.54 2.83
2670 4700 8.294954 TGGTCTGTAAATCCTTGTAAAACAAA 57.705 30.769 0.00 0.00 37.69 2.83
2671 4701 8.919145 TGGTCTGTAAATCCTTGTAAAACAAAT 58.081 29.630 0.00 0.00 37.69 2.32
2672 4702 9.406828 GGTCTGTAAATCCTTGTAAAACAAATC 57.593 33.333 0.00 0.00 37.69 2.17
2673 4703 9.406828 GTCTGTAAATCCTTGTAAAACAAATCC 57.593 33.333 0.00 0.00 37.69 3.01
2674 4704 8.293867 TCTGTAAATCCTTGTAAAACAAATCCG 58.706 33.333 0.00 0.00 37.69 4.18
2675 4705 7.942990 TGTAAATCCTTGTAAAACAAATCCGT 58.057 30.769 0.00 0.00 37.69 4.69
2676 4706 9.064706 TGTAAATCCTTGTAAAACAAATCCGTA 57.935 29.630 0.00 0.00 37.69 4.02
2677 4707 9.333497 GTAAATCCTTGTAAAACAAATCCGTAC 57.667 33.333 0.00 0.00 37.69 3.67
2678 4708 5.594724 TCCTTGTAAAACAAATCCGTACG 57.405 39.130 8.69 8.69 37.69 3.67
2679 4709 5.055812 TCCTTGTAAAACAAATCCGTACGT 58.944 37.500 15.21 0.00 37.69 3.57
2680 4710 5.050227 TCCTTGTAAAACAAATCCGTACGTG 60.050 40.000 15.21 8.29 37.69 4.49
2681 4711 5.277442 CCTTGTAAAACAAATCCGTACGTGT 60.277 40.000 15.21 8.98 37.69 4.49
2682 4712 6.073873 CCTTGTAAAACAAATCCGTACGTGTA 60.074 38.462 15.21 0.00 37.69 2.90
2683 4713 6.450845 TGTAAAACAAATCCGTACGTGTAG 57.549 37.500 15.21 0.00 0.00 2.74
2684 4714 4.394099 AAAACAAATCCGTACGTGTAGC 57.606 40.909 15.21 0.00 0.00 3.58
2685 4715 2.728690 ACAAATCCGTACGTGTAGCA 57.271 45.000 15.21 0.00 0.00 3.49
2686 4716 3.241067 ACAAATCCGTACGTGTAGCAT 57.759 42.857 15.21 0.00 0.00 3.79
2687 4717 3.592059 ACAAATCCGTACGTGTAGCATT 58.408 40.909 15.21 0.00 0.00 3.56
2688 4718 3.998341 ACAAATCCGTACGTGTAGCATTT 59.002 39.130 15.21 5.78 0.00 2.32
2689 4719 4.453136 ACAAATCCGTACGTGTAGCATTTT 59.547 37.500 15.21 0.00 0.00 1.82
2690 4720 5.049267 ACAAATCCGTACGTGTAGCATTTTT 60.049 36.000 15.21 0.00 0.00 1.94
2691 4721 4.593597 ATCCGTACGTGTAGCATTTTTG 57.406 40.909 15.21 0.00 0.00 2.44
2692 4722 2.158058 TCCGTACGTGTAGCATTTTTGC 59.842 45.455 15.21 0.00 0.00 3.68
2693 4723 2.155024 CGTACGTGTAGCATTTTTGCG 58.845 47.619 7.22 0.00 40.27 4.85
2694 4724 2.410517 CGTACGTGTAGCATTTTTGCGT 60.411 45.455 7.22 0.00 40.27 5.24
2695 4725 3.181542 CGTACGTGTAGCATTTTTGCGTA 60.182 43.478 7.22 0.00 40.27 4.42
2696 4726 3.881780 ACGTGTAGCATTTTTGCGTAA 57.118 38.095 0.00 0.00 40.27 3.18
2697 4727 4.212213 ACGTGTAGCATTTTTGCGTAAA 57.788 36.364 0.00 0.00 40.27 2.01
2698 4728 4.599047 ACGTGTAGCATTTTTGCGTAAAA 58.401 34.783 7.36 7.36 39.88 1.52
2699 4729 5.216648 ACGTGTAGCATTTTTGCGTAAAAT 58.783 33.333 12.26 8.16 45.14 1.82
2700 4730 5.688176 ACGTGTAGCATTTTTGCGTAAAATT 59.312 32.000 12.26 6.29 42.40 1.82
2701 4731 6.199342 ACGTGTAGCATTTTTGCGTAAAATTT 59.801 30.769 12.26 0.98 42.40 1.82
2702 4732 6.511308 CGTGTAGCATTTTTGCGTAAAATTTG 59.489 34.615 12.26 13.27 42.40 2.32
2703 4733 6.789877 GTGTAGCATTTTTGCGTAAAATTTGG 59.210 34.615 12.26 4.14 42.40 3.28
2704 4734 4.782156 AGCATTTTTGCGTAAAATTTGGC 58.218 34.783 12.26 12.57 42.40 4.52
2705 4735 3.911365 GCATTTTTGCGTAAAATTTGGCC 59.089 39.130 12.26 0.00 42.40 5.36
2706 4736 4.471373 CATTTTTGCGTAAAATTTGGCCC 58.529 39.130 12.26 0.00 42.40 5.80
2707 4737 1.784525 TTTGCGTAAAATTTGGCCCG 58.215 45.000 0.00 0.00 0.00 6.13
2708 4738 0.674534 TTGCGTAAAATTTGGCCCGT 59.325 45.000 0.00 0.00 0.00 5.28
2709 4739 0.674534 TGCGTAAAATTTGGCCCGTT 59.325 45.000 0.00 0.00 0.00 4.44
2710 4740 1.068741 TGCGTAAAATTTGGCCCGTTT 59.931 42.857 0.00 0.00 0.00 3.60
2711 4741 1.457683 GCGTAAAATTTGGCCCGTTTG 59.542 47.619 0.00 0.00 0.00 2.93
2712 4742 2.062519 CGTAAAATTTGGCCCGTTTGG 58.937 47.619 0.00 0.00 37.09 3.28
2754 4784 7.339212 TGTCCATATTCTTATTGACCCACTTTG 59.661 37.037 0.00 0.00 32.20 2.77
2819 4850 2.870372 GCGCACACCTGATTCACC 59.130 61.111 0.30 0.00 0.00 4.02
2832 4863 3.138304 TGATTCACCTTCCAACACTTCG 58.862 45.455 0.00 0.00 0.00 3.79
2894 7058 6.270463 AGACCATCTGAGCTCTTATGAATCAT 59.730 38.462 22.73 0.00 0.00 2.45
2906 7070 1.381522 TGAATCATGCCACATGGACG 58.618 50.000 0.87 0.00 37.39 4.79
2913 7077 1.169661 TGCCACATGGACGGTTCAAC 61.170 55.000 0.87 0.00 37.39 3.18
2925 7106 0.879090 GGTTCAACGGAATTCGGCTT 59.121 50.000 12.54 4.43 44.45 4.35
2960 7141 2.002586 CGACCGAATTCTGCAAGATGT 58.997 47.619 3.52 0.00 46.36 3.06
3010 7191 0.095245 CGTTGCTAGACACAATGCCG 59.905 55.000 0.00 0.00 0.00 5.69
3098 7279 5.017490 CCTCTAGAAACACCTCTCTAACCA 58.983 45.833 0.00 0.00 0.00 3.67
3194 7389 4.180817 GGCAACAAACACTGCTTAGTTTT 58.819 39.130 0.00 0.00 38.65 2.43
3365 7562 2.139917 GTCATTGTGTGCCTCGTGTAA 58.860 47.619 0.00 0.00 0.00 2.41
3384 7581 4.516321 TGTAAGTACGTGTCTCTTGTGCTA 59.484 41.667 0.00 0.00 0.00 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.550551 CACGATCCAATAACATATCAGCCTAAT 59.449 37.037 0.00 0.00 0.00 1.73
1 2 6.873605 CACGATCCAATAACATATCAGCCTAA 59.126 38.462 0.00 0.00 0.00 2.69
2 3 6.398095 CACGATCCAATAACATATCAGCCTA 58.602 40.000 0.00 0.00 0.00 3.93
3 4 5.240891 CACGATCCAATAACATATCAGCCT 58.759 41.667 0.00 0.00 0.00 4.58
4 5 4.393062 CCACGATCCAATAACATATCAGCC 59.607 45.833 0.00 0.00 0.00 4.85
5 6 4.393062 CCCACGATCCAATAACATATCAGC 59.607 45.833 0.00 0.00 0.00 4.26
6 7 5.551233 ACCCACGATCCAATAACATATCAG 58.449 41.667 0.00 0.00 0.00 2.90
7 8 5.560722 ACCCACGATCCAATAACATATCA 57.439 39.130 0.00 0.00 0.00 2.15
8 9 5.181245 CCAACCCACGATCCAATAACATATC 59.819 44.000 0.00 0.00 0.00 1.63
9 10 5.070001 CCAACCCACGATCCAATAACATAT 58.930 41.667 0.00 0.00 0.00 1.78
10 11 4.080243 ACCAACCCACGATCCAATAACATA 60.080 41.667 0.00 0.00 0.00 2.29
11 12 3.287222 CCAACCCACGATCCAATAACAT 58.713 45.455 0.00 0.00 0.00 2.71
12 13 2.040545 ACCAACCCACGATCCAATAACA 59.959 45.455 0.00 0.00 0.00 2.41
13 14 2.681344 GACCAACCCACGATCCAATAAC 59.319 50.000 0.00 0.00 0.00 1.89
14 15 2.678479 CGACCAACCCACGATCCAATAA 60.678 50.000 0.00 0.00 0.00 1.40
15 16 1.134640 CGACCAACCCACGATCCAATA 60.135 52.381 0.00 0.00 0.00 1.90
16 17 0.392461 CGACCAACCCACGATCCAAT 60.392 55.000 0.00 0.00 0.00 3.16
17 18 1.004320 CGACCAACCCACGATCCAA 60.004 57.895 0.00 0.00 0.00 3.53
18 19 1.261938 ATCGACCAACCCACGATCCA 61.262 55.000 0.00 0.00 41.80 3.41
19 20 0.107848 AATCGACCAACCCACGATCC 60.108 55.000 0.00 0.00 44.13 3.36
20 21 1.734163 AAATCGACCAACCCACGATC 58.266 50.000 0.00 0.00 44.13 3.69
21 22 1.810151 CAAAATCGACCAACCCACGAT 59.190 47.619 0.00 0.00 46.26 3.73
22 23 1.231221 CAAAATCGACCAACCCACGA 58.769 50.000 0.00 0.00 40.18 4.35
23 24 0.386731 GCAAAATCGACCAACCCACG 60.387 55.000 0.00 0.00 0.00 4.94
24 25 0.671251 TGCAAAATCGACCAACCCAC 59.329 50.000 0.00 0.00 0.00 4.61
25 26 0.958091 CTGCAAAATCGACCAACCCA 59.042 50.000 0.00 0.00 0.00 4.51
26 27 1.243902 TCTGCAAAATCGACCAACCC 58.756 50.000 0.00 0.00 0.00 4.11
27 28 2.487762 TGATCTGCAAAATCGACCAACC 59.512 45.455 0.00 0.00 0.00 3.77
28 29 3.829886 TGATCTGCAAAATCGACCAAC 57.170 42.857 0.00 0.00 0.00 3.77
29 30 3.191162 CCTTGATCTGCAAAATCGACCAA 59.809 43.478 0.00 0.00 35.74 3.67
30 31 2.749076 CCTTGATCTGCAAAATCGACCA 59.251 45.455 0.00 0.00 35.74 4.02
31 32 3.009723 TCCTTGATCTGCAAAATCGACC 58.990 45.455 0.00 0.00 35.74 4.79
32 33 3.935203 TCTCCTTGATCTGCAAAATCGAC 59.065 43.478 0.00 0.00 35.74 4.20
33 34 4.206477 TCTCCTTGATCTGCAAAATCGA 57.794 40.909 0.00 0.00 35.74 3.59
34 35 4.952262 TTCTCCTTGATCTGCAAAATCG 57.048 40.909 0.00 0.00 35.74 3.34
56 57 3.512724 CCACCATCATTGCCTCTCTTTTT 59.487 43.478 0.00 0.00 0.00 1.94
57 58 3.094572 CCACCATCATTGCCTCTCTTTT 58.905 45.455 0.00 0.00 0.00 2.27
58 59 2.622452 CCCACCATCATTGCCTCTCTTT 60.622 50.000 0.00 0.00 0.00 2.52
59 60 1.064166 CCCACCATCATTGCCTCTCTT 60.064 52.381 0.00 0.00 0.00 2.85
60 61 0.549950 CCCACCATCATTGCCTCTCT 59.450 55.000 0.00 0.00 0.00 3.10
61 62 0.466922 CCCCACCATCATTGCCTCTC 60.467 60.000 0.00 0.00 0.00 3.20
62 63 1.616921 CCCCACCATCATTGCCTCT 59.383 57.895 0.00 0.00 0.00 3.69
63 64 1.456331 CCCCCACCATCATTGCCTC 60.456 63.158 0.00 0.00 0.00 4.70
64 65 2.691732 CCCCCACCATCATTGCCT 59.308 61.111 0.00 0.00 0.00 4.75
65 66 3.156556 GCCCCCACCATCATTGCC 61.157 66.667 0.00 0.00 0.00 4.52
66 67 1.963464 CTTGCCCCCACCATCATTGC 61.963 60.000 0.00 0.00 0.00 3.56
67 68 0.324552 TCTTGCCCCCACCATCATTG 60.325 55.000 0.00 0.00 0.00 2.82
68 69 0.324645 GTCTTGCCCCCACCATCATT 60.325 55.000 0.00 0.00 0.00 2.57
69 70 1.217057 AGTCTTGCCCCCACCATCAT 61.217 55.000 0.00 0.00 0.00 2.45
70 71 1.434513 AAGTCTTGCCCCCACCATCA 61.435 55.000 0.00 0.00 0.00 3.07
71 72 0.681243 GAAGTCTTGCCCCCACCATC 60.681 60.000 0.00 0.00 0.00 3.51
72 73 1.142688 AGAAGTCTTGCCCCCACCAT 61.143 55.000 0.00 0.00 0.00 3.55
73 74 1.360393 AAGAAGTCTTGCCCCCACCA 61.360 55.000 0.00 0.00 34.38 4.17
74 75 0.696501 TAAGAAGTCTTGCCCCCACC 59.303 55.000 3.76 0.00 37.40 4.61
75 76 2.437413 CTTAAGAAGTCTTGCCCCCAC 58.563 52.381 0.00 0.00 37.40 4.61
76 77 1.271926 GCTTAAGAAGTCTTGCCCCCA 60.272 52.381 6.67 0.00 37.40 4.96
77 78 1.271926 TGCTTAAGAAGTCTTGCCCCC 60.272 52.381 6.67 0.00 37.40 5.40
78 79 2.200373 TGCTTAAGAAGTCTTGCCCC 57.800 50.000 6.67 0.00 37.40 5.80
79 80 3.149981 ACTTGCTTAAGAAGTCTTGCCC 58.850 45.455 6.67 0.00 37.40 5.36
80 81 4.142795 GCTACTTGCTTAAGAAGTCTTGCC 60.143 45.833 17.86 5.92 36.74 4.52
81 82 4.452455 TGCTACTTGCTTAAGAAGTCTTGC 59.548 41.667 17.86 18.51 43.37 4.01
82 83 6.203723 ACTTGCTACTTGCTTAAGAAGTCTTG 59.796 38.462 17.86 12.78 43.37 3.02
83 84 6.203723 CACTTGCTACTTGCTTAAGAAGTCTT 59.796 38.462 17.86 0.00 43.37 3.01
84 85 5.698545 CACTTGCTACTTGCTTAAGAAGTCT 59.301 40.000 17.86 4.39 43.37 3.24
85 86 5.696724 TCACTTGCTACTTGCTTAAGAAGTC 59.303 40.000 17.86 9.73 43.37 3.01
86 87 5.611374 TCACTTGCTACTTGCTTAAGAAGT 58.389 37.500 18.20 18.20 43.37 3.01
87 88 5.928839 TCTCACTTGCTACTTGCTTAAGAAG 59.071 40.000 6.67 9.50 43.37 2.85
88 89 5.853936 TCTCACTTGCTACTTGCTTAAGAA 58.146 37.500 6.67 0.00 43.37 2.52
89 90 5.468540 TCTCACTTGCTACTTGCTTAAGA 57.531 39.130 6.67 0.00 43.37 2.10
90 91 6.734104 AATCTCACTTGCTACTTGCTTAAG 57.266 37.500 0.00 0.00 43.37 1.85
91 92 7.659799 TGTAAATCTCACTTGCTACTTGCTTAA 59.340 33.333 0.00 0.00 43.37 1.85
92 93 7.158697 TGTAAATCTCACTTGCTACTTGCTTA 58.841 34.615 0.00 0.00 43.37 3.09
93 94 5.997746 TGTAAATCTCACTTGCTACTTGCTT 59.002 36.000 0.00 0.00 43.37 3.91
94 95 5.551233 TGTAAATCTCACTTGCTACTTGCT 58.449 37.500 0.00 0.00 43.37 3.91
95 96 5.163814 CCTGTAAATCTCACTTGCTACTTGC 60.164 44.000 0.00 0.00 43.25 4.01
96 97 5.352569 CCCTGTAAATCTCACTTGCTACTTG 59.647 44.000 0.00 0.00 0.00 3.16
97 98 5.491982 CCCTGTAAATCTCACTTGCTACTT 58.508 41.667 0.00 0.00 0.00 2.24
98 99 4.624125 GCCCTGTAAATCTCACTTGCTACT 60.624 45.833 0.00 0.00 0.00 2.57
136 137 1.935933 CAGCATGTAGACCCCGTTAC 58.064 55.000 0.00 0.00 0.00 2.50
151 152 7.931407 TCTTCTTATCTTTTGTTCACTACAGCA 59.069 33.333 0.00 0.00 38.19 4.41
169 170 6.126825 ACAGCTTCACAGGATCATCTTCTTAT 60.127 38.462 0.00 0.00 0.00 1.73
170 171 5.188555 ACAGCTTCACAGGATCATCTTCTTA 59.811 40.000 0.00 0.00 0.00 2.10
184 185 2.744741 TGACGAAACAAACAGCTTCACA 59.255 40.909 0.00 0.00 0.00 3.58
195 196 1.403323 TGCAGCAACATGACGAAACAA 59.597 42.857 0.00 0.00 0.00 2.83
197 198 2.336554 ATGCAGCAACATGACGAAAC 57.663 45.000 0.00 0.00 0.00 2.78
201 202 1.465777 TGAGAATGCAGCAACATGACG 59.534 47.619 0.00 0.00 0.00 4.35
251 252 4.327357 CGCTAGACCAAGTTCAACATAGTG 59.673 45.833 0.00 0.00 0.00 2.74
286 287 2.106511 CCCAGAGGAACAAAAGTGGAGA 59.893 50.000 0.00 0.00 33.47 3.71
327 328 1.586154 CCCGACCAAACATCTGCCAC 61.586 60.000 0.00 0.00 0.00 5.01
333 334 0.893727 ACAAGGCCCGACCAAACATC 60.894 55.000 0.00 0.00 43.14 3.06
342 343 1.229082 AGACTACCACAAGGCCCGA 60.229 57.895 0.00 0.00 39.06 5.14
372 375 5.548706 AACTACTGCACAAACGTAAACAA 57.451 34.783 0.00 0.00 0.00 2.83
375 378 5.798015 TCAAACTACTGCACAAACGTAAA 57.202 34.783 0.00 0.00 0.00 2.01
379 382 4.732285 AGATCAAACTACTGCACAAACG 57.268 40.909 0.00 0.00 0.00 3.60
397 400 6.012745 AGAAACCATGCAGTTTTCCTAAGAT 58.987 36.000 5.64 0.00 40.01 2.40
403 406 6.147656 CCATTAAAGAAACCATGCAGTTTTCC 59.852 38.462 5.64 0.00 40.01 3.13
406 409 6.418057 TCCATTAAAGAAACCATGCAGTTT 57.582 33.333 3.90 3.90 42.56 2.66
410 413 6.654161 CCAATTTCCATTAAAGAAACCATGCA 59.346 34.615 6.26 0.00 36.13 3.96
544 547 1.870064 AATTGGATCTGCCCCTTTGG 58.130 50.000 0.00 0.00 34.97 3.28
545 548 4.897670 AGATTAATTGGATCTGCCCCTTTG 59.102 41.667 5.62 0.00 32.79 2.77
546 549 5.143369 GAGATTAATTGGATCTGCCCCTTT 58.857 41.667 9.96 0.00 34.13 3.11
547 550 4.734266 GAGATTAATTGGATCTGCCCCTT 58.266 43.478 9.96 0.00 34.13 3.95
548 551 3.244700 CGAGATTAATTGGATCTGCCCCT 60.245 47.826 9.96 0.00 34.13 4.79
549 552 3.077359 CGAGATTAATTGGATCTGCCCC 58.923 50.000 9.96 0.00 34.13 5.80
550 553 3.077359 CCGAGATTAATTGGATCTGCCC 58.923 50.000 9.96 0.00 34.13 5.36
551 554 2.485814 GCCGAGATTAATTGGATCTGCC 59.514 50.000 9.96 0.00 34.13 4.85
552 555 3.406764 AGCCGAGATTAATTGGATCTGC 58.593 45.455 9.96 8.52 34.13 4.26
553 556 6.401394 TGATAGCCGAGATTAATTGGATCTG 58.599 40.000 9.96 4.52 34.13 2.90
554 557 6.611613 TGATAGCCGAGATTAATTGGATCT 57.388 37.500 6.01 6.01 36.60 2.75
555 558 7.672983 TTTGATAGCCGAGATTAATTGGATC 57.327 36.000 6.53 0.00 0.00 3.36
556 559 7.884877 TGATTTGATAGCCGAGATTAATTGGAT 59.115 33.333 6.53 3.24 0.00 3.41
557 560 7.223584 TGATTTGATAGCCGAGATTAATTGGA 58.776 34.615 6.53 0.00 0.00 3.53
558 561 7.439157 TGATTTGATAGCCGAGATTAATTGG 57.561 36.000 0.00 0.00 0.00 3.16
559 562 8.509690 ACATGATTTGATAGCCGAGATTAATTG 58.490 33.333 0.00 0.00 0.00 2.32
560 563 8.627208 ACATGATTTGATAGCCGAGATTAATT 57.373 30.769 0.00 0.00 0.00 1.40
561 564 7.879677 TGACATGATTTGATAGCCGAGATTAAT 59.120 33.333 0.00 0.00 0.00 1.40
562 565 7.216494 TGACATGATTTGATAGCCGAGATTAA 58.784 34.615 0.00 0.00 0.00 1.40
563 566 6.758254 TGACATGATTTGATAGCCGAGATTA 58.242 36.000 0.00 0.00 0.00 1.75
564 567 5.614308 TGACATGATTTGATAGCCGAGATT 58.386 37.500 0.00 0.00 0.00 2.40
565 568 5.219343 TGACATGATTTGATAGCCGAGAT 57.781 39.130 0.00 0.00 0.00 2.75
566 569 4.670896 TGACATGATTTGATAGCCGAGA 57.329 40.909 0.00 0.00 0.00 4.04
567 570 5.106791 GGATTGACATGATTTGATAGCCGAG 60.107 44.000 0.00 0.00 0.00 4.63
568 571 4.756642 GGATTGACATGATTTGATAGCCGA 59.243 41.667 0.00 0.00 0.00 5.54
569 572 4.516321 TGGATTGACATGATTTGATAGCCG 59.484 41.667 0.00 0.00 0.00 5.52
570 573 6.211515 GTTGGATTGACATGATTTGATAGCC 58.788 40.000 0.00 0.00 0.00 3.93
571 574 5.911280 CGTTGGATTGACATGATTTGATAGC 59.089 40.000 0.00 0.00 0.00 2.97
572 575 7.128331 GTCGTTGGATTGACATGATTTGATAG 58.872 38.462 0.00 0.00 35.20 2.08
573 576 6.038161 GGTCGTTGGATTGACATGATTTGATA 59.962 38.462 0.00 0.00 36.83 2.15
574 577 5.163622 GGTCGTTGGATTGACATGATTTGAT 60.164 40.000 0.00 0.00 36.83 2.57
575 578 4.155826 GGTCGTTGGATTGACATGATTTGA 59.844 41.667 0.00 0.00 36.83 2.69
576 579 4.156556 AGGTCGTTGGATTGACATGATTTG 59.843 41.667 0.00 0.00 36.83 2.32
577 580 4.335416 AGGTCGTTGGATTGACATGATTT 58.665 39.130 0.00 0.00 36.83 2.17
578 581 3.955471 AGGTCGTTGGATTGACATGATT 58.045 40.909 0.00 0.00 36.83 2.57
579 582 3.634397 AGGTCGTTGGATTGACATGAT 57.366 42.857 0.00 0.00 36.83 2.45
580 583 3.767131 TCTAGGTCGTTGGATTGACATGA 59.233 43.478 0.00 0.00 36.83 3.07
581 584 3.865745 GTCTAGGTCGTTGGATTGACATG 59.134 47.826 0.00 0.00 36.83 3.21
582 585 3.769844 AGTCTAGGTCGTTGGATTGACAT 59.230 43.478 0.00 0.00 36.83 3.06
583 586 3.056821 CAGTCTAGGTCGTTGGATTGACA 60.057 47.826 0.00 0.00 36.83 3.58
584 587 3.056749 ACAGTCTAGGTCGTTGGATTGAC 60.057 47.826 0.00 0.00 0.00 3.18
585 588 3.162666 ACAGTCTAGGTCGTTGGATTGA 58.837 45.455 0.00 0.00 0.00 2.57
586 589 3.594603 ACAGTCTAGGTCGTTGGATTG 57.405 47.619 0.00 0.00 0.00 2.67
587 590 4.039973 TGAAACAGTCTAGGTCGTTGGATT 59.960 41.667 0.00 0.00 0.00 3.01
588 591 3.576982 TGAAACAGTCTAGGTCGTTGGAT 59.423 43.478 0.00 0.00 0.00 3.41
589 592 2.960384 TGAAACAGTCTAGGTCGTTGGA 59.040 45.455 0.00 0.00 0.00 3.53
590 593 3.380479 TGAAACAGTCTAGGTCGTTGG 57.620 47.619 0.00 0.00 0.00 3.77
591 594 4.750098 ACATTGAAACAGTCTAGGTCGTTG 59.250 41.667 0.00 0.00 0.00 4.10
592 595 4.957296 ACATTGAAACAGTCTAGGTCGTT 58.043 39.130 0.00 0.00 0.00 3.85
593 596 4.557205 GACATTGAAACAGTCTAGGTCGT 58.443 43.478 0.00 0.00 34.13 4.34
595 598 4.806330 TCGACATTGAAACAGTCTAGGTC 58.194 43.478 0.00 0.00 38.76 3.85
596 599 4.810790 CTCGACATTGAAACAGTCTAGGT 58.189 43.478 0.00 0.00 0.00 3.08
597 600 3.614616 GCTCGACATTGAAACAGTCTAGG 59.385 47.826 0.00 0.00 0.00 3.02
598 601 3.301906 CGCTCGACATTGAAACAGTCTAG 59.698 47.826 0.00 0.00 0.00 2.43
599 602 3.242518 CGCTCGACATTGAAACAGTCTA 58.757 45.455 0.00 0.00 0.00 2.59
600 603 2.061773 CGCTCGACATTGAAACAGTCT 58.938 47.619 0.00 0.00 0.00 3.24
601 604 1.462541 GCGCTCGACATTGAAACAGTC 60.463 52.381 0.00 0.00 0.00 3.51
602 605 0.512952 GCGCTCGACATTGAAACAGT 59.487 50.000 0.00 0.00 0.00 3.55
603 606 0.792640 AGCGCTCGACATTGAAACAG 59.207 50.000 2.64 0.00 0.00 3.16
604 607 0.790207 GAGCGCTCGACATTGAAACA 59.210 50.000 23.61 0.00 0.00 2.83
605 608 0.790207 TGAGCGCTCGACATTGAAAC 59.210 50.000 30.75 5.13 0.00 2.78
606 609 1.194547 GTTGAGCGCTCGACATTGAAA 59.805 47.619 40.41 22.22 42.27 2.69
607 610 0.790207 GTTGAGCGCTCGACATTGAA 59.210 50.000 40.41 22.88 42.27 2.69
608 611 0.319469 TGTTGAGCGCTCGACATTGA 60.319 50.000 42.95 27.81 46.09 2.57
609 612 2.153039 TGTTGAGCGCTCGACATTG 58.847 52.632 42.95 0.00 46.09 2.82
610 613 4.673403 TGTTGAGCGCTCGACATT 57.327 50.000 42.95 9.77 46.09 2.71
613 616 1.818221 AAACGTGTTGAGCGCTCGAC 61.818 55.000 39.44 39.44 42.86 4.20
614 617 0.318022 TAAACGTGTTGAGCGCTCGA 60.318 50.000 30.75 27.40 0.00 4.04
615 618 0.091344 CTAAACGTGTTGAGCGCTCG 59.909 55.000 30.75 21.89 0.00 5.03
616 619 0.179248 GCTAAACGTGTTGAGCGCTC 60.179 55.000 30.42 30.42 37.32 5.03
617 620 1.860078 GCTAAACGTGTTGAGCGCT 59.140 52.632 11.27 11.27 37.32 5.92
618 621 4.417240 GCTAAACGTGTTGAGCGC 57.583 55.556 6.34 0.00 37.32 5.92
629 632 6.177822 GCATGAAATTAATTGCACGCTAAAC 58.822 36.000 17.97 0.00 32.06 2.01
630 633 5.290643 GGCATGAAATTAATTGCACGCTAAA 59.709 36.000 22.83 0.00 35.02 1.85
631 634 4.803088 GGCATGAAATTAATTGCACGCTAA 59.197 37.500 22.83 0.00 35.02 3.09
632 635 4.142293 TGGCATGAAATTAATTGCACGCTA 60.142 37.500 22.83 16.47 35.02 4.26
633 636 3.189285 GGCATGAAATTAATTGCACGCT 58.811 40.909 22.83 1.49 35.02 5.07
634 637 2.928757 TGGCATGAAATTAATTGCACGC 59.071 40.909 17.18 17.18 33.92 5.34
635 638 5.527511 TTTGGCATGAAATTAATTGCACG 57.472 34.783 11.20 4.34 36.82 5.34
687 690 9.712305 GCATGCGGATATTAAGTAGGATATTAT 57.288 33.333 0.00 0.00 0.00 1.28
688 691 8.700973 TGCATGCGGATATTAAGTAGGATATTA 58.299 33.333 14.09 0.00 0.00 0.98
689 692 7.495934 GTGCATGCGGATATTAAGTAGGATATT 59.504 37.037 14.09 0.00 0.00 1.28
690 693 6.986817 GTGCATGCGGATATTAAGTAGGATAT 59.013 38.462 14.09 0.00 0.00 1.63
691 694 6.154534 AGTGCATGCGGATATTAAGTAGGATA 59.845 38.462 14.09 0.00 0.00 2.59
692 695 5.046304 AGTGCATGCGGATATTAAGTAGGAT 60.046 40.000 14.09 0.00 0.00 3.24
693 696 4.283467 AGTGCATGCGGATATTAAGTAGGA 59.717 41.667 14.09 0.00 0.00 2.94
694 697 4.569943 AGTGCATGCGGATATTAAGTAGG 58.430 43.478 14.09 0.00 0.00 3.18
695 698 7.652300 TTAAGTGCATGCGGATATTAAGTAG 57.348 36.000 14.09 0.00 0.00 2.57
696 699 9.884636 ATATTAAGTGCATGCGGATATTAAGTA 57.115 29.630 14.09 8.17 0.00 2.24
697 700 8.792830 ATATTAAGTGCATGCGGATATTAAGT 57.207 30.769 14.09 4.58 0.00 2.24
699 702 9.884636 AGTATATTAAGTGCATGCGGATATTAA 57.115 29.630 14.09 12.83 0.00 1.40
700 703 9.884636 AAGTATATTAAGTGCATGCGGATATTA 57.115 29.630 14.09 4.65 0.00 0.98
701 704 8.792830 AAGTATATTAAGTGCATGCGGATATT 57.207 30.769 14.09 5.62 0.00 1.28
702 705 8.668353 CAAAGTATATTAAGTGCATGCGGATAT 58.332 33.333 14.09 13.06 0.00 1.63
703 706 7.875554 TCAAAGTATATTAAGTGCATGCGGATA 59.124 33.333 14.09 6.94 0.00 2.59
704 707 6.710295 TCAAAGTATATTAAGTGCATGCGGAT 59.290 34.615 14.09 3.59 0.00 4.18
705 708 6.052360 TCAAAGTATATTAAGTGCATGCGGA 58.948 36.000 14.09 0.00 0.00 5.54
706 709 6.299023 TCAAAGTATATTAAGTGCATGCGG 57.701 37.500 14.09 0.00 0.00 5.69
707 710 8.786937 ATTTCAAAGTATATTAAGTGCATGCG 57.213 30.769 14.09 0.00 0.00 4.73
719 722 9.019764 GCAATGCACGTTAATTTCAAAGTATAT 57.980 29.630 0.00 0.00 0.00 0.86
720 723 8.023706 TGCAATGCACGTTAATTTCAAAGTATA 58.976 29.630 2.72 0.00 31.71 1.47
721 724 6.865726 TGCAATGCACGTTAATTTCAAAGTAT 59.134 30.769 2.72 0.00 31.71 2.12
722 725 6.209361 TGCAATGCACGTTAATTTCAAAGTA 58.791 32.000 2.72 0.00 31.71 2.24
723 726 5.046529 TGCAATGCACGTTAATTTCAAAGT 58.953 33.333 2.72 0.00 31.71 2.66
724 727 5.573296 TGCAATGCACGTTAATTTCAAAG 57.427 34.783 2.72 0.00 31.71 2.77
738 741 1.876156 TCAATGTGTACGTGCAATGCA 59.124 42.857 8.25 2.72 35.60 3.96
739 742 2.095768 AGTCAATGTGTACGTGCAATGC 60.096 45.455 8.25 0.00 0.00 3.56
740 743 3.811722 AGTCAATGTGTACGTGCAATG 57.188 42.857 8.25 8.35 0.00 2.82
741 744 7.333423 ACTTATTAGTCAATGTGTACGTGCAAT 59.667 33.333 8.25 1.77 0.00 3.56
742 745 6.647481 ACTTATTAGTCAATGTGTACGTGCAA 59.353 34.615 8.25 0.00 0.00 4.08
743 746 6.160684 ACTTATTAGTCAATGTGTACGTGCA 58.839 36.000 0.82 0.82 0.00 4.57
744 747 6.642683 ACTTATTAGTCAATGTGTACGTGC 57.357 37.500 0.00 0.00 0.00 5.34
790 793 9.987726 AAAGAAAGAGGGAGAAATAAAGATCAT 57.012 29.630 0.00 0.00 0.00 2.45
793 796 9.679661 GAGAAAGAAAGAGGGAGAAATAAAGAT 57.320 33.333 0.00 0.00 0.00 2.40
796 799 8.103935 GGAGAGAAAGAAAGAGGGAGAAATAAA 58.896 37.037 0.00 0.00 0.00 1.40
799 802 5.045213 GGGAGAGAAAGAAAGAGGGAGAAAT 60.045 44.000 0.00 0.00 0.00 2.17
807 810 3.244249 ACCGTTGGGAGAGAAAGAAAGAG 60.244 47.826 0.00 0.00 36.97 2.85
900 905 2.292267 GTTGCATGTGCTATAGGCTGT 58.708 47.619 6.55 0.00 42.66 4.40
901 906 1.605710 GGTTGCATGTGCTATAGGCTG 59.394 52.381 6.55 0.00 42.66 4.85
921 933 7.720442 TGAGAGAGAATGGATTGTATAGTGTG 58.280 38.462 0.00 0.00 0.00 3.82
922 934 7.904558 TGAGAGAGAATGGATTGTATAGTGT 57.095 36.000 0.00 0.00 0.00 3.55
964 976 6.150307 TCGTTGCATGGATTGTATAGTGTTTT 59.850 34.615 0.00 0.00 0.00 2.43
1348 1611 4.451652 GACTTTGCTGCTCGGCGC 62.452 66.667 0.00 0.00 39.77 6.53
1357 1620 0.036306 CTAACCCGGTGGACTTTGCT 59.964 55.000 0.00 0.00 34.81 3.91
1361 1624 0.683412 GTGTCTAACCCGGTGGACTT 59.317 55.000 18.77 0.00 34.81 3.01
1690 1953 4.747529 GTGCCGTACGACCACCCC 62.748 72.222 18.76 0.00 0.00 4.95
1768 2037 2.436646 CGCGGCTCCACCAAAGAT 60.437 61.111 0.00 0.00 39.03 2.40
2267 2539 2.758737 GGAGATGGTCGTCCCGGT 60.759 66.667 0.00 0.00 35.15 5.28
2299 2571 3.041701 CACACAATGGCAGCCGTT 58.958 55.556 13.69 13.69 32.22 4.44
2329 2601 3.126831 CAAAAGAGAGCAAGAGACACGT 58.873 45.455 0.00 0.00 0.00 4.49
2330 2602 3.060003 CACAAAAGAGAGCAAGAGACACG 60.060 47.826 0.00 0.00 0.00 4.49
2331 2603 3.303659 GCACAAAAGAGAGCAAGAGACAC 60.304 47.826 0.00 0.00 0.00 3.67
2332 2604 2.874701 GCACAAAAGAGAGCAAGAGACA 59.125 45.455 0.00 0.00 0.00 3.41
2348 2620 0.813610 AAGCACGTACAGCAGCACAA 60.814 50.000 9.63 0.00 0.00 3.33
2349 2621 1.227527 AAGCACGTACAGCAGCACA 60.228 52.632 9.63 0.00 0.00 4.57
2350 2622 1.205064 CAAGCACGTACAGCAGCAC 59.795 57.895 9.63 0.00 0.00 4.40
2351 2623 1.960763 CCAAGCACGTACAGCAGCA 60.961 57.895 9.63 0.00 0.00 4.41
2352 2624 2.680913 CCCAAGCACGTACAGCAGC 61.681 63.158 9.63 0.00 0.00 5.25
2353 2625 1.005037 TCCCAAGCACGTACAGCAG 60.005 57.895 9.63 2.38 0.00 4.24
2488 4518 4.364817 AATTTTACGTGTGACGACTTCG 57.635 40.909 0.00 0.00 46.05 3.79
2501 4531 4.271687 GTCTAGCATTGCCGAATTTTACG 58.728 43.478 4.70 0.00 0.00 3.18
2510 4540 1.206745 CCGTACGTCTAGCATTGCCG 61.207 60.000 15.21 4.23 0.00 5.69
2514 4544 0.384669 GCCTCCGTACGTCTAGCATT 59.615 55.000 15.21 0.00 0.00 3.56
2515 4545 0.465824 AGCCTCCGTACGTCTAGCAT 60.466 55.000 15.21 0.00 0.00 3.79
2517 4547 0.455005 AAAGCCTCCGTACGTCTAGC 59.545 55.000 15.21 11.21 0.00 3.42
2518 4548 2.679837 TGTAAAGCCTCCGTACGTCTAG 59.320 50.000 15.21 8.39 0.00 2.43
2519 4549 2.679837 CTGTAAAGCCTCCGTACGTCTA 59.320 50.000 15.21 0.00 0.00 2.59
2521 4551 1.468736 CCTGTAAAGCCTCCGTACGTC 60.469 57.143 15.21 0.32 0.00 4.34
2522 4552 0.529378 CCTGTAAAGCCTCCGTACGT 59.471 55.000 15.21 0.00 0.00 3.57
2523 4553 0.813184 TCCTGTAAAGCCTCCGTACG 59.187 55.000 8.69 8.69 0.00 3.67
2524 4554 1.823610 AGTCCTGTAAAGCCTCCGTAC 59.176 52.381 0.00 0.00 0.00 3.67
2525 4555 2.226962 AGTCCTGTAAAGCCTCCGTA 57.773 50.000 0.00 0.00 0.00 4.02
2526 4556 1.349067 AAGTCCTGTAAAGCCTCCGT 58.651 50.000 0.00 0.00 0.00 4.69
2527 4557 2.474410 AAAGTCCTGTAAAGCCTCCG 57.526 50.000 0.00 0.00 0.00 4.63
2528 4558 4.648651 TGTAAAAGTCCTGTAAAGCCTCC 58.351 43.478 0.00 0.00 0.00 4.30
2529 4559 4.695928 CCTGTAAAAGTCCTGTAAAGCCTC 59.304 45.833 0.00 0.00 0.00 4.70
2530 4560 4.652822 CCTGTAAAAGTCCTGTAAAGCCT 58.347 43.478 0.00 0.00 0.00 4.58
2531 4561 3.190744 GCCTGTAAAAGTCCTGTAAAGCC 59.809 47.826 0.00 0.00 0.00 4.35
2532 4562 3.818773 TGCCTGTAAAAGTCCTGTAAAGC 59.181 43.478 0.00 0.00 0.00 3.51
2533 4563 6.381801 CATTGCCTGTAAAAGTCCTGTAAAG 58.618 40.000 0.00 0.00 0.00 1.85
2534 4564 5.278758 GCATTGCCTGTAAAAGTCCTGTAAA 60.279 40.000 0.00 0.00 0.00 2.01
2535 4565 4.217550 GCATTGCCTGTAAAAGTCCTGTAA 59.782 41.667 0.00 0.00 0.00 2.41
2536 4566 3.756434 GCATTGCCTGTAAAAGTCCTGTA 59.244 43.478 0.00 0.00 0.00 2.74
2537 4567 2.558359 GCATTGCCTGTAAAAGTCCTGT 59.442 45.455 0.00 0.00 0.00 4.00
2538 4568 2.821969 AGCATTGCCTGTAAAAGTCCTG 59.178 45.455 4.70 0.00 0.00 3.86
2539 4569 2.821969 CAGCATTGCCTGTAAAAGTCCT 59.178 45.455 4.70 0.00 0.00 3.85
2540 4570 2.819608 TCAGCATTGCCTGTAAAAGTCC 59.180 45.455 4.70 0.00 34.47 3.85
2541 4571 3.119708 CCTCAGCATTGCCTGTAAAAGTC 60.120 47.826 4.70 0.00 34.47 3.01
2542 4572 2.821969 CCTCAGCATTGCCTGTAAAAGT 59.178 45.455 4.70 0.00 34.47 2.66
2543 4573 2.821969 ACCTCAGCATTGCCTGTAAAAG 59.178 45.455 4.70 0.00 34.47 2.27
2544 4574 2.557924 CACCTCAGCATTGCCTGTAAAA 59.442 45.455 4.70 0.00 34.47 1.52
2545 4575 2.161855 CACCTCAGCATTGCCTGTAAA 58.838 47.619 4.70 0.00 34.47 2.01
2546 4576 1.614051 CCACCTCAGCATTGCCTGTAA 60.614 52.381 4.70 0.00 34.47 2.41
2547 4577 0.035152 CCACCTCAGCATTGCCTGTA 60.035 55.000 4.70 0.00 34.47 2.74
2548 4578 1.303888 CCACCTCAGCATTGCCTGT 60.304 57.895 4.70 0.00 34.47 4.00
2549 4579 2.050350 CCCACCTCAGCATTGCCTG 61.050 63.158 4.70 3.54 0.00 4.85
2550 4580 2.357836 CCCACCTCAGCATTGCCT 59.642 61.111 4.70 0.00 0.00 4.75
2551 4581 3.455469 GCCCACCTCAGCATTGCC 61.455 66.667 4.70 0.00 0.00 4.52
2552 4582 2.362120 AGCCCACCTCAGCATTGC 60.362 61.111 0.00 0.00 0.00 3.56
2553 4583 2.050350 CCAGCCCACCTCAGCATTG 61.050 63.158 0.00 0.00 0.00 2.82
2554 4584 2.085343 AACCAGCCCACCTCAGCATT 62.085 55.000 0.00 0.00 0.00 3.56
2555 4585 2.085343 AAACCAGCCCACCTCAGCAT 62.085 55.000 0.00 0.00 0.00 3.79
2556 4586 1.422977 TAAACCAGCCCACCTCAGCA 61.423 55.000 0.00 0.00 0.00 4.41
2557 4587 0.251165 TTAAACCAGCCCACCTCAGC 60.251 55.000 0.00 0.00 0.00 4.26
2558 4588 2.493278 CAATTAAACCAGCCCACCTCAG 59.507 50.000 0.00 0.00 0.00 3.35
2559 4589 2.524306 CAATTAAACCAGCCCACCTCA 58.476 47.619 0.00 0.00 0.00 3.86
2560 4590 1.824852 CCAATTAAACCAGCCCACCTC 59.175 52.381 0.00 0.00 0.00 3.85
2561 4591 1.149077 ACCAATTAAACCAGCCCACCT 59.851 47.619 0.00 0.00 0.00 4.00
2562 4592 1.639722 ACCAATTAAACCAGCCCACC 58.360 50.000 0.00 0.00 0.00 4.61
2563 4593 5.414789 AATTACCAATTAAACCAGCCCAC 57.585 39.130 0.00 0.00 0.00 4.61
2564 4594 6.494952 TCTAATTACCAATTAAACCAGCCCA 58.505 36.000 0.00 0.00 33.26 5.36
2565 4595 7.286775 TCATCTAATTACCAATTAAACCAGCCC 59.713 37.037 0.00 0.00 33.26 5.19
2566 4596 8.232913 TCATCTAATTACCAATTAAACCAGCC 57.767 34.615 0.00 0.00 33.26 4.85
2567 4597 8.352942 CCTCATCTAATTACCAATTAAACCAGC 58.647 37.037 0.00 0.00 33.26 4.85
2568 4598 8.352942 GCCTCATCTAATTACCAATTAAACCAG 58.647 37.037 0.00 0.00 33.26 4.00
2569 4599 7.836685 TGCCTCATCTAATTACCAATTAAACCA 59.163 33.333 0.00 0.00 33.26 3.67
2570 4600 8.232913 TGCCTCATCTAATTACCAATTAAACC 57.767 34.615 0.00 0.00 33.26 3.27
2571 4601 8.352942 CCTGCCTCATCTAATTACCAATTAAAC 58.647 37.037 0.00 0.00 33.26 2.01
2572 4602 7.014230 GCCTGCCTCATCTAATTACCAATTAAA 59.986 37.037 0.00 0.00 33.26 1.52
2573 4603 6.490040 GCCTGCCTCATCTAATTACCAATTAA 59.510 38.462 0.00 0.00 33.26 1.40
2574 4604 6.003950 GCCTGCCTCATCTAATTACCAATTA 58.996 40.000 0.00 0.00 32.38 1.40
2575 4605 4.829492 GCCTGCCTCATCTAATTACCAATT 59.171 41.667 0.00 0.00 34.90 2.32
2576 4606 4.401925 GCCTGCCTCATCTAATTACCAAT 58.598 43.478 0.00 0.00 0.00 3.16
2577 4607 3.435026 GGCCTGCCTCATCTAATTACCAA 60.435 47.826 0.00 0.00 0.00 3.67
2578 4608 2.106511 GGCCTGCCTCATCTAATTACCA 59.893 50.000 0.00 0.00 0.00 3.25
2579 4609 2.553247 GGGCCTGCCTCATCTAATTACC 60.553 54.545 8.29 0.00 36.10 2.85
2580 4610 2.553247 GGGGCCTGCCTCATCTAATTAC 60.553 54.545 8.29 0.00 36.36 1.89
2581 4611 1.705186 GGGGCCTGCCTCATCTAATTA 59.295 52.381 8.29 0.00 36.36 1.40
2582 4612 0.480252 GGGGCCTGCCTCATCTAATT 59.520 55.000 8.29 0.00 36.36 1.40
2583 4613 0.698886 TGGGGCCTGCCTCATCTAAT 60.699 55.000 6.65 0.00 42.59 1.73
2584 4614 1.307778 TGGGGCCTGCCTCATCTAA 60.308 57.895 6.65 0.00 42.59 2.10
2585 4615 2.372276 TGGGGCCTGCCTCATCTA 59.628 61.111 6.65 0.00 42.59 1.98
2593 4623 4.299796 TTTCAGGGTGGGGCCTGC 62.300 66.667 0.84 0.00 37.43 4.85
2594 4624 2.283173 GTTTCAGGGTGGGGCCTG 60.283 66.667 0.84 0.00 37.43 4.85
2595 4625 2.452491 AGTTTCAGGGTGGGGCCT 60.452 61.111 0.84 0.00 37.43 5.19
2596 4626 2.035783 GAGTTTCAGGGTGGGGCC 59.964 66.667 0.00 0.00 0.00 5.80
2597 4627 1.303643 CTGAGTTTCAGGGTGGGGC 60.304 63.158 0.00 0.00 40.71 5.80
2616 4646 1.723288 CCTCACTAATCTCCTCCCCC 58.277 60.000 0.00 0.00 0.00 5.40
2617 4647 1.220750 TCCCTCACTAATCTCCTCCCC 59.779 57.143 0.00 0.00 0.00 4.81
2618 4648 2.604139 CTCCCTCACTAATCTCCTCCC 58.396 57.143 0.00 0.00 0.00 4.30
2619 4649 2.178106 TCCTCCCTCACTAATCTCCTCC 59.822 54.545 0.00 0.00 0.00 4.30
2620 4650 3.496331 CTCCTCCCTCACTAATCTCCTC 58.504 54.545 0.00 0.00 0.00 3.71
2621 4651 2.178984 CCTCCTCCCTCACTAATCTCCT 59.821 54.545 0.00 0.00 0.00 3.69
2622 4652 2.604139 CCTCCTCCCTCACTAATCTCC 58.396 57.143 0.00 0.00 0.00 3.71
2623 4653 2.090999 ACCCTCCTCCCTCACTAATCTC 60.091 54.545 0.00 0.00 0.00 2.75
2624 4654 1.940957 ACCCTCCTCCCTCACTAATCT 59.059 52.381 0.00 0.00 0.00 2.40
2625 4655 2.436173 CAACCCTCCTCCCTCACTAATC 59.564 54.545 0.00 0.00 0.00 1.75
2626 4656 2.482494 CAACCCTCCTCCCTCACTAAT 58.518 52.381 0.00 0.00 0.00 1.73
2627 4657 1.554822 CCAACCCTCCTCCCTCACTAA 60.555 57.143 0.00 0.00 0.00 2.24
2628 4658 0.042731 CCAACCCTCCTCCCTCACTA 59.957 60.000 0.00 0.00 0.00 2.74
2629 4659 1.229658 CCAACCCTCCTCCCTCACT 60.230 63.158 0.00 0.00 0.00 3.41
2630 4660 1.539124 ACCAACCCTCCTCCCTCAC 60.539 63.158 0.00 0.00 0.00 3.51
2631 4661 1.229529 GACCAACCCTCCTCCCTCA 60.230 63.158 0.00 0.00 0.00 3.86
2632 4662 1.081277 AGACCAACCCTCCTCCCTC 59.919 63.158 0.00 0.00 0.00 4.30
2633 4663 1.229658 CAGACCAACCCTCCTCCCT 60.230 63.158 0.00 0.00 0.00 4.20
2634 4664 0.252558 TACAGACCAACCCTCCTCCC 60.253 60.000 0.00 0.00 0.00 4.30
2635 4665 1.652947 TTACAGACCAACCCTCCTCC 58.347 55.000 0.00 0.00 0.00 4.30
2636 4666 3.370633 GGATTTACAGACCAACCCTCCTC 60.371 52.174 0.00 0.00 0.00 3.71
2637 4667 2.576648 GGATTTACAGACCAACCCTCCT 59.423 50.000 0.00 0.00 0.00 3.69
2638 4668 2.576648 AGGATTTACAGACCAACCCTCC 59.423 50.000 0.00 0.00 0.00 4.30
2639 4669 4.010349 CAAGGATTTACAGACCAACCCTC 58.990 47.826 0.00 0.00 0.00 4.30
2640 4670 3.397955 ACAAGGATTTACAGACCAACCCT 59.602 43.478 0.00 0.00 0.00 4.34
2641 4671 3.763057 ACAAGGATTTACAGACCAACCC 58.237 45.455 0.00 0.00 0.00 4.11
2642 4672 6.887626 TTTACAAGGATTTACAGACCAACC 57.112 37.500 0.00 0.00 0.00 3.77
2643 4673 7.708998 TGTTTTACAAGGATTTACAGACCAAC 58.291 34.615 0.00 0.00 0.00 3.77
2644 4674 7.883391 TGTTTTACAAGGATTTACAGACCAA 57.117 32.000 0.00 0.00 0.00 3.67
2645 4675 7.883391 TTGTTTTACAAGGATTTACAGACCA 57.117 32.000 0.00 0.00 32.34 4.02
2646 4676 9.406828 GATTTGTTTTACAAGGATTTACAGACC 57.593 33.333 0.00 0.00 39.53 3.85
2647 4677 9.406828 GGATTTGTTTTACAAGGATTTACAGAC 57.593 33.333 0.00 0.00 39.53 3.51
2648 4678 8.293867 CGGATTTGTTTTACAAGGATTTACAGA 58.706 33.333 0.00 0.00 39.53 3.41
2649 4679 8.079809 ACGGATTTGTTTTACAAGGATTTACAG 58.920 33.333 0.00 0.00 39.53 2.74
2650 4680 7.942990 ACGGATTTGTTTTACAAGGATTTACA 58.057 30.769 0.00 0.00 39.53 2.41
2651 4681 9.333497 GTACGGATTTGTTTTACAAGGATTTAC 57.667 33.333 0.00 0.00 39.53 2.01
2652 4682 8.229137 CGTACGGATTTGTTTTACAAGGATTTA 58.771 33.333 7.57 0.00 39.53 1.40
2653 4683 7.079475 CGTACGGATTTGTTTTACAAGGATTT 58.921 34.615 7.57 0.00 39.53 2.17
2654 4684 6.205270 ACGTACGGATTTGTTTTACAAGGATT 59.795 34.615 21.06 0.00 39.53 3.01
2655 4685 5.702209 ACGTACGGATTTGTTTTACAAGGAT 59.298 36.000 21.06 0.00 39.53 3.24
2656 4686 5.050227 CACGTACGGATTTGTTTTACAAGGA 60.050 40.000 21.06 0.00 39.53 3.36
2657 4687 5.141568 CACGTACGGATTTGTTTTACAAGG 58.858 41.667 21.06 0.00 39.53 3.61
2658 4688 5.740406 ACACGTACGGATTTGTTTTACAAG 58.260 37.500 21.06 0.00 39.53 3.16
2659 4689 5.731599 ACACGTACGGATTTGTTTTACAA 57.268 34.783 21.06 0.00 36.11 2.41
2660 4690 5.107530 GCTACACGTACGGATTTGTTTTACA 60.108 40.000 21.06 0.00 0.00 2.41
2661 4691 5.107530 TGCTACACGTACGGATTTGTTTTAC 60.108 40.000 21.06 5.81 0.00 2.01
2662 4692 4.987285 TGCTACACGTACGGATTTGTTTTA 59.013 37.500 21.06 0.00 0.00 1.52
2663 4693 3.808726 TGCTACACGTACGGATTTGTTTT 59.191 39.130 21.06 0.00 0.00 2.43
2664 4694 3.391965 TGCTACACGTACGGATTTGTTT 58.608 40.909 21.06 0.00 0.00 2.83
2665 4695 3.029320 TGCTACACGTACGGATTTGTT 57.971 42.857 21.06 2.65 0.00 2.83
2666 4696 2.728690 TGCTACACGTACGGATTTGT 57.271 45.000 21.06 16.45 0.00 2.83
2667 4697 4.593597 AAATGCTACACGTACGGATTTG 57.406 40.909 21.06 11.09 29.42 2.32
2668 4698 5.387279 CAAAAATGCTACACGTACGGATTT 58.613 37.500 21.06 10.22 31.39 2.17
2669 4699 4.670735 GCAAAAATGCTACACGTACGGATT 60.671 41.667 21.06 5.49 0.00 3.01
2670 4700 3.181514 GCAAAAATGCTACACGTACGGAT 60.182 43.478 21.06 9.51 0.00 4.18
2671 4701 2.158058 GCAAAAATGCTACACGTACGGA 59.842 45.455 21.06 3.34 0.00 4.69
2672 4702 2.501881 GCAAAAATGCTACACGTACGG 58.498 47.619 21.06 11.05 0.00 4.02
2673 4703 2.155024 CGCAAAAATGCTACACGTACG 58.845 47.619 15.01 15.01 0.00 3.67
2674 4704 3.177605 ACGCAAAAATGCTACACGTAC 57.822 42.857 0.00 0.00 0.00 3.67
2675 4705 4.986875 TTACGCAAAAATGCTACACGTA 57.013 36.364 0.00 0.00 33.82 3.57
2676 4706 3.881780 TTACGCAAAAATGCTACACGT 57.118 38.095 0.00 0.00 36.17 4.49
2677 4707 5.739237 ATTTTACGCAAAAATGCTACACG 57.261 34.783 7.95 0.00 44.36 4.49
2678 4708 6.789877 CCAAATTTTACGCAAAAATGCTACAC 59.210 34.615 9.17 0.00 45.12 2.90
2679 4709 6.564873 GCCAAATTTTACGCAAAAATGCTACA 60.565 34.615 9.17 0.00 45.12 2.74
2680 4710 5.788041 GCCAAATTTTACGCAAAAATGCTAC 59.212 36.000 9.17 0.00 45.12 3.58
2681 4711 5.106908 GGCCAAATTTTACGCAAAAATGCTA 60.107 36.000 0.00 0.00 45.12 3.49
2682 4712 4.320129 GGCCAAATTTTACGCAAAAATGCT 60.320 37.500 0.00 0.00 45.12 3.79
2683 4713 3.911365 GGCCAAATTTTACGCAAAAATGC 59.089 39.130 0.00 8.50 45.12 3.56
2684 4714 4.471373 GGGCCAAATTTTACGCAAAAATG 58.529 39.130 4.39 6.47 45.12 2.32
2686 4716 2.544267 CGGGCCAAATTTTACGCAAAAA 59.456 40.909 4.39 0.00 41.21 1.94
2687 4717 2.135933 CGGGCCAAATTTTACGCAAAA 58.864 42.857 4.39 0.00 38.00 2.44
2688 4718 1.068741 ACGGGCCAAATTTTACGCAAA 59.931 42.857 4.39 0.00 0.00 3.68
2689 4719 0.674534 ACGGGCCAAATTTTACGCAA 59.325 45.000 4.39 0.00 0.00 4.85
2690 4720 0.674534 AACGGGCCAAATTTTACGCA 59.325 45.000 4.39 0.00 0.00 5.24
2691 4721 1.457683 CAAACGGGCCAAATTTTACGC 59.542 47.619 4.39 0.00 0.00 4.42
2692 4722 2.062519 CCAAACGGGCCAAATTTTACG 58.937 47.619 4.39 0.00 0.00 3.18
2693 4723 2.418692 CCCAAACGGGCCAAATTTTAC 58.581 47.619 4.39 0.00 36.72 2.01
2694 4724 2.841442 CCCAAACGGGCCAAATTTTA 57.159 45.000 4.39 0.00 36.72 1.52
2695 4725 3.715871 CCCAAACGGGCCAAATTTT 57.284 47.368 4.39 0.00 36.72 1.82
2705 4735 1.379527 GATAGGTCTTGCCCAAACGG 58.620 55.000 0.00 0.00 38.26 4.44
2706 4736 1.006832 CGATAGGTCTTGCCCAAACG 58.993 55.000 0.00 0.00 38.26 3.60
2707 4737 0.733150 GCGATAGGTCTTGCCCAAAC 59.267 55.000 0.00 0.00 38.26 2.93
2708 4738 0.742990 CGCGATAGGTCTTGCCCAAA 60.743 55.000 0.00 0.00 38.26 3.28
2709 4739 1.153449 CGCGATAGGTCTTGCCCAA 60.153 57.895 0.00 0.00 38.26 4.12
2710 4740 2.355986 ACGCGATAGGTCTTGCCCA 61.356 57.895 15.93 0.00 38.26 5.36
2711 4741 1.883084 CACGCGATAGGTCTTGCCC 60.883 63.158 15.93 0.00 38.26 5.36
2712 4742 1.146358 GACACGCGATAGGTCTTGCC 61.146 60.000 15.93 0.00 37.58 4.52
2754 4784 2.350772 GCATATGGTCTGCGCATTTACC 60.351 50.000 22.92 22.92 0.00 2.85
2784 4814 2.475685 GCGCGTTTATGAAAGGAGAACC 60.476 50.000 8.43 0.00 0.00 3.62
2785 4815 2.158841 TGCGCGTTTATGAAAGGAGAAC 59.841 45.455 8.43 0.00 0.00 3.01
2792 4822 1.069568 CAGGTGTGCGCGTTTATGAAA 60.070 47.619 8.43 0.00 0.00 2.69
2819 4850 4.468095 AATTTCGTCGAAGTGTTGGAAG 57.532 40.909 7.86 0.00 0.00 3.46
2832 4863 7.415229 ACTGTAACAAAAGGAGAAATTTCGTC 58.585 34.615 12.42 10.05 0.00 4.20
2864 4895 1.554160 AGAGCTCAGATGGTCTGGTTG 59.446 52.381 17.77 0.63 44.39 3.77
2887 7051 1.381522 CGTCCATGTGGCATGATTCA 58.618 50.000 10.34 0.00 34.44 2.57
2890 7054 0.034186 AACCGTCCATGTGGCATGAT 60.034 50.000 10.34 0.00 34.44 2.45
2894 7058 1.149401 TTGAACCGTCCATGTGGCA 59.851 52.632 0.00 0.00 34.44 4.92
2906 7070 0.879090 AAGCCGAATTCCGTTGAACC 59.121 50.000 0.00 0.00 36.31 3.62
2913 7077 4.511826 AGCTAAGAATTAAGCCGAATTCCG 59.488 41.667 14.33 0.00 43.84 4.30
2960 7141 0.535335 GTTGAGGTATGTCTCCGGCA 59.465 55.000 0.00 0.00 33.04 5.69
3010 7191 4.222847 CCGCTTAGCCCTCGTCCC 62.223 72.222 0.00 0.00 0.00 4.46
3081 7262 6.459710 CCACTTTTTGGTTAGAGAGGTGTTTC 60.460 42.308 0.00 0.00 41.10 2.78
3098 7279 6.436218 AGCTCGGGATTATAAAACCACTTTTT 59.564 34.615 12.13 0.00 40.65 1.94
3194 7389 3.046390 CGAAATTTTACACGCAGGCAAA 58.954 40.909 0.00 0.00 0.00 3.68
3202 7397 8.648422 TTTATGTCATCACGAAATTTTACACG 57.352 30.769 0.00 0.00 0.00 4.49
3234 7429 9.490663 GATTTAGTTATTTTCGTCCAGACATTG 57.509 33.333 0.00 0.00 0.00 2.82
3235 7430 9.226606 TGATTTAGTTATTTTCGTCCAGACATT 57.773 29.630 0.00 0.00 0.00 2.71
3365 7562 3.058155 CAGTAGCACAAGAGACACGTACT 60.058 47.826 0.00 0.00 0.00 2.73
3384 7581 0.756903 AAGTCCCAAGCACGTACAGT 59.243 50.000 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.