Multiple sequence alignment - TraesCS7A01G146600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G146600 chr7A 100.000 8825 0 0 1 8825 98723787 98732611 0.000000e+00 16297.0
1 TraesCS7A01G146600 chr7A 82.930 826 130 10 6157 6979 99143774 99142957 0.000000e+00 734.0
2 TraesCS7A01G146600 chr7A 85.303 660 92 5 5433 6089 99144666 99144009 0.000000e+00 676.0
3 TraesCS7A01G146600 chr7A 82.153 706 90 20 2912 3609 99146576 99145899 2.760000e-159 573.0
4 TraesCS7A01G146600 chr7A 78.252 515 97 14 4426 4928 99145654 99145143 5.140000e-82 316.0
5 TraesCS7A01G146600 chr7A 96.791 187 5 1 8064 8250 702613872 702614057 2.390000e-80 311.0
6 TraesCS7A01G146600 chr7A 95.676 185 7 1 8065 8249 239034042 239034225 6.700000e-76 296.0
7 TraesCS7A01G146600 chr7A 95.161 186 8 1 8065 8249 119302589 119302404 8.670000e-75 292.0
8 TraesCS7A01G146600 chr7A 100.000 41 0 0 2019 2059 98725765 98725805 9.500000e-10 76.8
9 TraesCS7A01G146600 chr7A 100.000 41 0 0 1979 2019 98725805 98725845 9.500000e-10 76.8
10 TraesCS7A01G146600 chr7D 95.607 2026 74 10 1 2019 95052388 95054405 0.000000e+00 3234.0
11 TraesCS7A01G146600 chr7D 95.404 1893 70 9 6181 8066 95058771 95060653 0.000000e+00 2998.0
12 TraesCS7A01G146600 chr7D 94.734 1766 69 13 2018 3771 95054364 95056117 0.000000e+00 2724.0
13 TraesCS7A01G146600 chr7D 94.052 1715 80 12 4404 6109 95057071 95058772 0.000000e+00 2582.0
14 TraesCS7A01G146600 chr7D 83.706 804 125 5 6157 6958 95149029 95148230 0.000000e+00 754.0
15 TraesCS7A01G146600 chr7D 83.313 827 111 14 6157 6979 96082889 96082086 0.000000e+00 737.0
16 TraesCS7A01G146600 chr7D 80.711 928 139 26 5191 6089 95150170 95149254 0.000000e+00 686.0
17 TraesCS7A01G146600 chr7D 93.243 444 14 6 3758 4189 95056383 95056822 2.690000e-179 640.0
18 TraesCS7A01G146600 chr7D 80.952 819 144 10 6157 6971 95990484 95989674 9.660000e-179 638.0
19 TraesCS7A01G146600 chr7D 76.161 1313 182 85 2376 3609 96052429 96051169 3.570000e-158 569.0
20 TraesCS7A01G146600 chr7D 85.000 580 46 16 8249 8825 95060644 95061185 1.290000e-152 551.0
21 TraesCS7A01G146600 chr7D 79.048 525 87 18 4421 4928 95150950 95150432 1.100000e-88 339.0
22 TraesCS7A01G146600 chr7D 84.459 296 39 6 8535 8825 94940158 94939865 1.450000e-72 285.0
23 TraesCS7A01G146600 chr7D 79.805 307 33 13 3327 3621 95151464 95151175 6.990000e-46 196.0
24 TraesCS7A01G146600 chr7D 89.583 96 9 1 4310 4405 95056922 95057016 4.330000e-23 121.0
25 TraesCS7A01G146600 chr7D 77.966 177 38 1 7141 7316 95963581 95963405 9.370000e-20 110.0
26 TraesCS7A01G146600 chr7D 77.576 165 37 0 7152 7316 95969648 95969484 5.640000e-17 100.0
27 TraesCS7A01G146600 chr7B 93.043 1840 86 25 4267 6086 49181385 49183202 0.000000e+00 2651.0
28 TraesCS7A01G146600 chr7B 89.932 2066 139 35 12 2019 49177148 49179202 0.000000e+00 2599.0
29 TraesCS7A01G146600 chr7B 92.124 1511 85 18 2694 4189 49179862 49181353 0.000000e+00 2100.0
30 TraesCS7A01G146600 chr7B 94.748 971 43 3 6163 7127 49183245 49184213 0.000000e+00 1504.0
31 TraesCS7A01G146600 chr7B 92.754 1035 49 13 7038 8066 49184178 49185192 0.000000e+00 1472.0
32 TraesCS7A01G146600 chr7B 91.966 697 44 7 2018 2709 49179161 49179850 0.000000e+00 966.0
33 TraesCS7A01G146600 chr7B 81.608 908 128 29 5172 6051 49360308 49361204 0.000000e+00 715.0
34 TraesCS7A01G146600 chr7B 81.785 818 139 10 6157 6971 49361456 49362266 0.000000e+00 676.0
35 TraesCS7A01G146600 chr7B 82.763 731 119 7 6230 6956 49587645 49588372 0.000000e+00 645.0
36 TraesCS7A01G146600 chr7B 80.090 889 142 21 5191 6051 49555637 49556518 5.820000e-176 628.0
37 TraesCS7A01G146600 chr7B 80.793 807 149 5 6157 6961 49612715 49611913 2.090000e-175 627.0
38 TraesCS7A01G146600 chr7B 85.517 580 46 15 8249 8825 49185183 49185727 9.940000e-159 571.0
39 TraesCS7A01G146600 chr7B 79.783 460 88 5 4483 4940 49359624 49360080 6.610000e-86 329.0
40 TraesCS7A01G146600 chr7B 78.925 465 88 6 4483 4940 49554931 49555392 3.090000e-79 307.0
41 TraesCS7A01G146600 chr7B 79.902 408 77 5 4536 4940 49614451 49614046 2.410000e-75 294.0
42 TraesCS7A01G146600 chr7B 83.984 256 35 6 951 1202 49356746 49356999 3.180000e-59 241.0
43 TraesCS7A01G146600 chr7B 82.427 239 42 0 7465 7703 50680381 50680143 8.980000e-50 209.0
44 TraesCS7A01G146600 chr7B 92.857 42 3 0 2053 2094 50881299 50881258 2.660000e-05 62.1
45 TraesCS7A01G146600 chr4B 84.846 1234 118 34 4394 5612 475931598 475932777 0.000000e+00 1179.0
46 TraesCS7A01G146600 chr4B 85.366 287 22 14 3840 4114 475838653 475838931 6.750000e-71 279.0
47 TraesCS7A01G146600 chr5D 79.453 1645 240 62 4503 6086 547239483 547237876 0.000000e+00 1075.0
48 TraesCS7A01G146600 chr5D 85.938 768 104 2 6237 7002 547237623 547236858 0.000000e+00 817.0
49 TraesCS7A01G146600 chr4A 85.786 802 114 0 6237 7038 621739714 621740515 0.000000e+00 850.0
50 TraesCS7A01G146600 chr4A 86.260 655 89 1 5433 6086 621738808 621739462 0.000000e+00 710.0
51 TraesCS7A01G146600 chr4A 82.776 389 63 4 4520 4906 621737801 621738187 2.360000e-90 344.0
52 TraesCS7A01G146600 chr4A 81.564 358 45 12 7451 7800 621740817 621741161 8.730000e-70 276.0
53 TraesCS7A01G146600 chr5B 83.073 898 144 7 6146 7038 690320549 690319655 0.000000e+00 809.0
54 TraesCS7A01G146600 chr5B 85.802 655 92 1 5433 6086 690321464 690320810 0.000000e+00 693.0
55 TraesCS7A01G146600 chr5B 77.778 891 139 36 4500 5345 690322467 690321591 2.210000e-135 494.0
56 TraesCS7A01G146600 chr3A 96.237 186 5 1 8066 8249 713869257 713869072 4.000000e-78 303.0
57 TraesCS7A01G146600 chr3A 95.213 188 8 1 8064 8251 714166023 714166209 6.700000e-76 296.0
58 TraesCS7A01G146600 chr1A 96.175 183 6 1 8067 8249 585625204 585625023 1.860000e-76 298.0
59 TraesCS7A01G146600 chr1A 94.118 187 9 2 8064 8249 61717223 61717408 5.220000e-72 283.0
60 TraesCS7A01G146600 chr2A 91.848 184 9 2 8067 8250 753599444 753599267 1.470000e-62 252.0
61 TraesCS7A01G146600 chr3D 88.119 202 20 2 8058 8259 429728135 429728332 4.120000e-58 237.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G146600 chr7A 98723787 98732611 8824 False 16297.000000 16297 100.000000 1 8825 1 chr7A.!!$F1 8824
1 TraesCS7A01G146600 chr7A 99142957 99146576 3619 True 574.750000 734 82.159500 2912 6979 4 chr7A.!!$R2 4067
2 TraesCS7A01G146600 chr7D 95052388 95061185 8797 False 1835.714286 3234 92.517571 1 8825 7 chr7D.!!$F1 8824
3 TraesCS7A01G146600 chr7D 96082086 96082889 803 True 737.000000 737 83.313000 6157 6979 1 chr7D.!!$R6 822
4 TraesCS7A01G146600 chr7D 95989674 95990484 810 True 638.000000 638 80.952000 6157 6971 1 chr7D.!!$R4 814
5 TraesCS7A01G146600 chr7D 96051169 96052429 1260 True 569.000000 569 76.161000 2376 3609 1 chr7D.!!$R5 1233
6 TraesCS7A01G146600 chr7D 95148230 95151464 3234 True 493.750000 754 80.817500 3327 6958 4 chr7D.!!$R7 3631
7 TraesCS7A01G146600 chr7B 49177148 49185727 8579 False 1694.714286 2651 91.440571 12 8825 7 chr7B.!!$F2 8813
8 TraesCS7A01G146600 chr7B 49587645 49588372 727 False 645.000000 645 82.763000 6230 6956 1 chr7B.!!$F1 726
9 TraesCS7A01G146600 chr7B 49356746 49362266 5520 False 490.250000 715 81.790000 951 6971 4 chr7B.!!$F3 6020
10 TraesCS7A01G146600 chr7B 49554931 49556518 1587 False 467.500000 628 79.507500 4483 6051 2 chr7B.!!$F4 1568
11 TraesCS7A01G146600 chr7B 49611913 49614451 2538 True 460.500000 627 80.347500 4536 6961 2 chr7B.!!$R3 2425
12 TraesCS7A01G146600 chr4B 475931598 475932777 1179 False 1179.000000 1179 84.846000 4394 5612 1 chr4B.!!$F2 1218
13 TraesCS7A01G146600 chr5D 547236858 547239483 2625 True 946.000000 1075 82.695500 4503 7002 2 chr5D.!!$R1 2499
14 TraesCS7A01G146600 chr4A 621737801 621741161 3360 False 545.000000 850 84.096500 4520 7800 4 chr4A.!!$F1 3280
15 TraesCS7A01G146600 chr5B 690319655 690322467 2812 True 665.333333 809 82.217667 4500 7038 3 chr5B.!!$R1 2538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
741 795 0.321919 TGTGTCTACTACCGAGCCGT 60.322 55.000 0.00 0.00 0.00 5.68 F
1820 1892 0.175073 AGGAATCCGCTCCGTACAAC 59.825 55.000 0.00 0.00 40.75 3.32 F
2557 2728 0.183014 CTCTGCAGATCCCCAGCAAT 59.817 55.000 18.63 0.00 37.89 3.56 F
3641 3959 0.303493 GTACACCAACGTGCACACAG 59.697 55.000 18.64 2.84 44.40 3.66 F
4302 4916 0.030235 CATCCGTCGCCTATGAACGA 59.970 55.000 0.00 0.00 35.62 3.85 F
4412 5052 0.603569 CCTGACGTACAGCCTCTTGT 59.396 55.000 8.85 0.00 44.52 3.16 F
5656 6704 1.153369 CCACCATGGGCGACTACAG 60.153 63.158 18.09 0.00 32.67 2.74 F
6134 7182 1.771854 TGGGTAGGATGTGTGTGTGTT 59.228 47.619 0.00 0.00 0.00 3.32 F
7741 9108 0.175989 GCGGAGATTCTTCGTTCCCT 59.824 55.000 15.54 0.00 34.53 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2374 2533 1.509644 CCACGATGATTCCATGGGCG 61.510 60.0 13.02 8.91 33.46 6.13 R
3628 3946 0.443869 GATAGGCTGTGTGCACGTTG 59.556 55.0 13.13 5.40 45.15 4.10 R
4191 4805 0.028902 GTTTCAAACCAGCGCTCGTT 59.971 50.0 15.01 15.01 0.00 3.85 R
4471 5260 0.527817 GATACTTGTCAGCCGTCCCG 60.528 60.0 0.00 0.00 0.00 5.14 R
5909 6957 0.880278 CACCAGTGTCAACCACCTCG 60.880 60.0 0.00 0.00 45.74 4.63 R
6337 7637 0.688087 GGTCCTCTTCCACCTCCGAT 60.688 60.0 0.00 0.00 0.00 4.18 R
6604 7904 0.739462 TAATGTTGGAGTCGCCGCTG 60.739 55.0 0.00 0.00 40.66 5.18 R
7748 9115 0.251916 GATCATGTGACCGGGGAACA 59.748 55.0 6.32 7.57 0.00 3.18 R
8609 9983 0.790207 TCGTTTGCACTGATCGAAGC 59.210 50.0 0.00 0.00 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 8.786898 AGGCAAATAAGCTACATATGTACATTG 58.213 33.333 14.77 13.81 34.17 2.82
144 149 7.572814 TCAATGGAATATAGGTGACATGTTGA 58.427 34.615 0.00 0.00 0.00 3.18
257 262 3.092334 ACTTTTCAATTTCCGCGCTTT 57.908 38.095 5.56 0.00 0.00 3.51
274 279 4.201851 GCGCTTTGAGATTTTCAGCTGATA 60.202 41.667 19.04 10.46 37.07 2.15
298 303 1.845266 ACGCATTAGACAGAGCATCG 58.155 50.000 0.00 0.00 42.67 3.84
304 309 3.406728 TTAGACAGAGCATCGAACGAG 57.593 47.619 2.94 0.00 42.67 4.18
391 417 4.546674 AGGAAAGGACTTGGTTCATGTTT 58.453 39.130 0.00 0.00 0.00 2.83
625 679 3.872603 AACACTGCCTCACGCCCA 61.873 61.111 0.00 0.00 36.24 5.36
736 790 1.070821 CGTCGTGTGTCTACTACCGA 58.929 55.000 0.00 0.00 0.00 4.69
741 795 0.321919 TGTGTCTACTACCGAGCCGT 60.322 55.000 0.00 0.00 0.00 5.68
823 877 0.548989 TGCGGTGCAGGGGTAAATAT 59.451 50.000 0.00 0.00 33.32 1.28
1007 1062 7.377928 CGTATACCTAGGAAACAAATACTCACG 59.622 40.741 17.98 3.18 0.00 4.35
1098 1154 2.148768 GTGGGGTAGTTCCTTCAAACG 58.851 52.381 0.00 0.00 34.27 3.60
1127 1183 4.137543 GGCTTTAATCCCACTGGTATGAG 58.862 47.826 0.00 0.00 0.00 2.90
1397 1460 4.256920 GCATATGTGGGTATGTGATCTCC 58.743 47.826 4.29 0.00 35.09 3.71
1448 1511 5.437191 TCTTTTGGAAGAGGAGGATTACC 57.563 43.478 0.00 0.00 36.99 2.85
1469 1532 1.338136 CCCGGTCTCTTGGCATAGGT 61.338 60.000 0.00 0.00 0.00 3.08
1488 1555 8.082242 GCATAGGTGTGAGTTCAAAAGTAATTT 58.918 33.333 0.00 0.00 0.00 1.82
1730 1802 7.504924 TTGAAGATTTTGTTCCGTACAAGAT 57.495 32.000 4.13 4.13 46.81 2.40
1820 1892 0.175073 AGGAATCCGCTCCGTACAAC 59.825 55.000 0.00 0.00 40.75 3.32
1947 2038 2.917227 TGAGGCAGTGGCGAGTCA 60.917 61.111 11.51 7.03 42.47 3.41
1970 2061 4.884668 AGAACTCCCTTTTGTCGTATGA 57.115 40.909 0.00 0.00 0.00 2.15
1977 2068 5.853936 TCCCTTTTGTCGTATGATCCTATG 58.146 41.667 0.00 0.00 0.00 2.23
1993 2084 6.206634 TGATCCTATGTTGTTTTTCTGGTCAC 59.793 38.462 0.00 0.00 0.00 3.67
1994 2085 4.825085 TCCTATGTTGTTTTTCTGGTCACC 59.175 41.667 0.00 0.00 0.00 4.02
1997 2088 2.162608 TGTTGTTTTTCTGGTCACCGTG 59.837 45.455 0.00 0.00 0.00 4.94
1999 2090 1.740585 TGTTTTTCTGGTCACCGTGTG 59.259 47.619 0.00 0.00 34.45 3.82
2000 2091 1.741145 GTTTTTCTGGTCACCGTGTGT 59.259 47.619 0.00 0.00 34.79 3.72
2001 2092 2.116827 TTTTCTGGTCACCGTGTGTT 57.883 45.000 0.00 0.00 34.79 3.32
2003 2094 2.519377 TTCTGGTCACCGTGTGTTAG 57.481 50.000 0.00 0.00 34.79 2.34
2006 2097 2.230508 TCTGGTCACCGTGTGTTAGATC 59.769 50.000 0.00 0.00 34.79 2.75
2008 2099 3.423749 TGGTCACCGTGTGTTAGATCTA 58.576 45.455 0.00 0.00 34.79 1.98
2009 2100 3.192001 TGGTCACCGTGTGTTAGATCTAC 59.808 47.826 0.67 0.00 34.79 2.59
2010 2101 3.428589 GGTCACCGTGTGTTAGATCTACC 60.429 52.174 0.67 0.00 34.79 3.18
2011 2102 2.756760 TCACCGTGTGTTAGATCTACCC 59.243 50.000 0.67 0.00 34.79 3.69
2012 2103 2.494471 CACCGTGTGTTAGATCTACCCA 59.506 50.000 0.67 0.00 0.00 4.51
2013 2104 3.132289 CACCGTGTGTTAGATCTACCCAT 59.868 47.826 0.67 0.00 0.00 4.00
2014 2105 3.132289 ACCGTGTGTTAGATCTACCCATG 59.868 47.826 0.67 5.06 0.00 3.66
2015 2106 3.492656 CCGTGTGTTAGATCTACCCATGG 60.493 52.174 4.14 4.14 0.00 3.66
2016 2107 3.383505 CGTGTGTTAGATCTACCCATGGA 59.616 47.826 15.22 0.00 0.00 3.41
2017 2108 4.142026 CGTGTGTTAGATCTACCCATGGAA 60.142 45.833 15.22 0.00 0.00 3.53
2018 2109 5.453339 CGTGTGTTAGATCTACCCATGGAAT 60.453 44.000 15.22 3.13 0.00 3.01
2019 2110 6.357367 GTGTGTTAGATCTACCCATGGAATT 58.643 40.000 15.22 0.00 0.00 2.17
2020 2111 6.260936 GTGTGTTAGATCTACCCATGGAATTG 59.739 42.308 15.22 2.00 0.00 2.32
2021 2112 6.069673 TGTGTTAGATCTACCCATGGAATTGT 60.070 38.462 15.22 4.79 0.00 2.71
2022 2113 6.828785 GTGTTAGATCTACCCATGGAATTGTT 59.171 38.462 15.22 0.00 0.00 2.83
2023 2114 7.339466 GTGTTAGATCTACCCATGGAATTGTTT 59.661 37.037 15.22 0.00 0.00 2.83
2024 2115 7.893302 TGTTAGATCTACCCATGGAATTGTTTT 59.107 33.333 15.22 0.00 0.00 2.43
2025 2116 8.749354 GTTAGATCTACCCATGGAATTGTTTTT 58.251 33.333 15.22 0.00 0.00 1.94
2026 2117 7.410120 AGATCTACCCATGGAATTGTTTTTC 57.590 36.000 15.22 0.63 0.00 2.29
2027 2118 7.184862 AGATCTACCCATGGAATTGTTTTTCT 58.815 34.615 15.22 2.84 0.00 2.52
2028 2119 6.588719 TCTACCCATGGAATTGTTTTTCTG 57.411 37.500 15.22 0.00 0.00 3.02
2029 2120 4.622260 ACCCATGGAATTGTTTTTCTGG 57.378 40.909 15.22 0.00 0.00 3.86
2030 2121 3.973305 ACCCATGGAATTGTTTTTCTGGT 59.027 39.130 15.22 0.00 0.00 4.00
2031 2122 4.040339 ACCCATGGAATTGTTTTTCTGGTC 59.960 41.667 15.22 0.00 0.00 4.02
2032 2123 4.040217 CCCATGGAATTGTTTTTCTGGTCA 59.960 41.667 15.22 0.00 0.00 4.02
2113 2227 0.249489 GCGATCTGTTAGCGGGATGT 60.249 55.000 0.00 0.00 37.50 3.06
2208 2361 4.031418 TCGTTAGACGAGTTGAAACACA 57.969 40.909 0.00 0.00 46.73 3.72
2209 2362 4.422840 TCGTTAGACGAGTTGAAACACAA 58.577 39.130 0.00 0.00 46.73 3.33
2262 2415 9.788960 CAGCCTAAAAGACAGTTTAATTTATCC 57.211 33.333 0.00 0.00 0.00 2.59
2263 2416 8.674607 AGCCTAAAAGACAGTTTAATTTATCCG 58.325 33.333 0.00 0.00 0.00 4.18
2265 2418 8.455682 CCTAAAAGACAGTTTAATTTATCCGCA 58.544 33.333 0.00 0.00 0.00 5.69
2403 2562 0.744874 ATCATCGTGGTCGTAGTGGG 59.255 55.000 0.00 0.00 38.33 4.61
2407 2566 1.211969 CGTGGTCGTAGTGGGTCTG 59.788 63.158 0.00 0.00 0.00 3.51
2557 2728 0.183014 CTCTGCAGATCCCCAGCAAT 59.817 55.000 18.63 0.00 37.89 3.56
2589 2760 9.985730 ATCTTATTTCCGATACGTAATTAACCA 57.014 29.630 0.00 0.00 0.00 3.67
2875 3098 4.630069 GTCCAAGATAACATAGCAACACGT 59.370 41.667 0.00 0.00 0.00 4.49
2876 3099 5.808540 GTCCAAGATAACATAGCAACACGTA 59.191 40.000 0.00 0.00 0.00 3.57
2877 3100 5.808540 TCCAAGATAACATAGCAACACGTAC 59.191 40.000 0.00 0.00 0.00 3.67
3267 3574 2.734723 CCTGTCGGTGACACTGCG 60.735 66.667 9.71 3.74 37.67 5.18
3278 3585 4.988598 CACTGCGGGCGTGGTCTT 62.989 66.667 0.00 0.00 0.00 3.01
3457 3769 1.399791 CGAAGCTGATGAAGGCCTTTC 59.600 52.381 21.54 14.95 36.29 2.62
3628 3946 5.753438 CCATCCATATATGCATACGTACACC 59.247 44.000 8.99 0.00 0.00 4.16
3641 3959 0.303493 GTACACCAACGTGCACACAG 59.697 55.000 18.64 2.84 44.40 3.66
3647 3965 0.443869 CAACGTGCACACAGCCTATC 59.556 55.000 18.64 0.00 44.83 2.08
3650 3968 1.548719 ACGTGCACACAGCCTATCTAA 59.451 47.619 18.64 0.00 44.83 2.10
3652 3970 1.927174 GTGCACACAGCCTATCTAACG 59.073 52.381 13.17 0.00 44.83 3.18
3653 3971 1.548719 TGCACACAGCCTATCTAACGT 59.451 47.619 0.00 0.00 44.83 3.99
3655 3973 3.193903 TGCACACAGCCTATCTAACGTAA 59.806 43.478 0.00 0.00 44.83 3.18
3656 3974 4.142026 TGCACACAGCCTATCTAACGTAAT 60.142 41.667 0.00 0.00 44.83 1.89
3658 3976 5.050972 GCACACAGCCTATCTAACGTAATTC 60.051 44.000 0.00 0.00 37.23 2.17
3659 3977 5.462398 CACACAGCCTATCTAACGTAATTCC 59.538 44.000 0.00 0.00 0.00 3.01
3661 3979 5.692204 CACAGCCTATCTAACGTAATTCCTG 59.308 44.000 0.00 0.00 0.00 3.86
3662 3980 5.363005 ACAGCCTATCTAACGTAATTCCTGT 59.637 40.000 0.00 0.00 0.00 4.00
3663 3981 5.692204 CAGCCTATCTAACGTAATTCCTGTG 59.308 44.000 0.00 0.00 0.00 3.66
3664 3982 4.448060 GCCTATCTAACGTAATTCCTGTGC 59.552 45.833 0.00 0.00 0.00 4.57
3665 3983 5.597806 CCTATCTAACGTAATTCCTGTGCA 58.402 41.667 0.00 0.00 0.00 4.57
3667 3985 6.706270 CCTATCTAACGTAATTCCTGTGCATT 59.294 38.462 0.00 0.00 0.00 3.56
3682 4001 6.922957 TCCTGTGCATTATTTTTGTCAAGAAC 59.077 34.615 0.00 0.00 0.00 3.01
3729 4048 9.290988 TCTTCCAAGTTTGCTGTTTATACATTA 57.709 29.630 0.00 0.00 32.86 1.90
3730 4049 9.906660 CTTCCAAGTTTGCTGTTTATACATTAA 57.093 29.630 0.00 0.00 32.86 1.40
3742 4061 9.567848 CTGTTTATACATTAAAAAGCAACGGAT 57.432 29.630 0.00 0.00 32.86 4.18
3824 4426 2.570442 TTTTGTTTTGGCGACCTCAC 57.430 45.000 0.00 0.00 0.00 3.51
3894 4501 5.295292 TCCTAGCTATTGACAGTACGTACAC 59.705 44.000 26.55 17.02 0.00 2.90
3913 4520 4.218312 ACACAATCTTGCTTCCTTCCTTT 58.782 39.130 0.00 0.00 0.00 3.11
3917 4524 1.202758 TCTTGCTTCCTTCCTTTCGCA 60.203 47.619 0.00 0.00 0.00 5.10
4030 4640 3.524095 TCCCCAAAGCAAGATTTCTCA 57.476 42.857 0.00 0.00 0.00 3.27
4069 4679 1.312815 GAGCTCTGGCACAAAACTGT 58.687 50.000 6.43 0.00 38.70 3.55
4189 4803 9.632807 TTCTTTTGCAATTTATTTACAGCGTAT 57.367 25.926 0.00 0.00 0.00 3.06
4190 4804 9.071221 TCTTTTGCAATTTATTTACAGCGTATG 57.929 29.630 0.00 0.00 0.00 2.39
4191 4805 8.972262 TTTTGCAATTTATTTACAGCGTATGA 57.028 26.923 0.00 0.00 0.00 2.15
4193 4807 7.962934 TGCAATTTATTTACAGCGTATGAAC 57.037 32.000 0.00 0.00 0.00 3.18
4203 4817 4.496670 GTATGAACGAGCGCTGGT 57.503 55.556 20.15 20.15 0.00 4.00
4205 4819 1.076332 GTATGAACGAGCGCTGGTTT 58.924 50.000 33.59 23.08 31.66 3.27
4206 4820 1.075542 TATGAACGAGCGCTGGTTTG 58.924 50.000 33.59 12.98 31.66 2.93
4208 4822 0.812014 TGAACGAGCGCTGGTTTGAA 60.812 50.000 33.59 21.37 31.66 2.69
4209 4823 0.306533 GAACGAGCGCTGGTTTGAAA 59.693 50.000 33.59 0.00 31.66 2.69
4211 4825 0.814010 ACGAGCGCTGGTTTGAAACT 60.814 50.000 20.15 0.00 0.00 2.66
4213 4827 0.944386 GAGCGCTGGTTTGAAACTGA 59.056 50.000 18.48 0.00 0.00 3.41
4214 4828 1.537202 GAGCGCTGGTTTGAAACTGAT 59.463 47.619 18.48 0.00 0.00 2.90
4215 4829 1.537202 AGCGCTGGTTTGAAACTGATC 59.463 47.619 10.39 0.00 0.00 2.92
4216 4830 1.537202 GCGCTGGTTTGAAACTGATCT 59.463 47.619 8.09 0.00 0.00 2.75
4217 4831 2.413371 GCGCTGGTTTGAAACTGATCTC 60.413 50.000 8.09 0.00 0.00 2.75
4219 4833 2.489722 GCTGGTTTGAAACTGATCTCCC 59.510 50.000 8.09 0.00 0.00 4.30
4220 4834 3.754965 CTGGTTTGAAACTGATCTCCCA 58.245 45.455 8.09 0.00 0.00 4.37
4221 4835 4.338879 CTGGTTTGAAACTGATCTCCCAT 58.661 43.478 8.09 0.00 0.00 4.00
4222 4836 4.335416 TGGTTTGAAACTGATCTCCCATC 58.665 43.478 8.09 0.00 0.00 3.51
4223 4837 4.043310 TGGTTTGAAACTGATCTCCCATCT 59.957 41.667 8.09 0.00 0.00 2.90
4224 4838 4.397417 GGTTTGAAACTGATCTCCCATCTG 59.603 45.833 8.09 0.00 0.00 2.90
4225 4839 3.272574 TGAAACTGATCTCCCATCTGC 57.727 47.619 0.00 0.00 0.00 4.26
4226 4840 2.842496 TGAAACTGATCTCCCATCTGCT 59.158 45.455 0.00 0.00 0.00 4.24
4227 4841 4.033009 TGAAACTGATCTCCCATCTGCTA 58.967 43.478 0.00 0.00 0.00 3.49
4228 4842 4.100653 TGAAACTGATCTCCCATCTGCTAG 59.899 45.833 0.00 0.00 0.00 3.42
4229 4843 3.326946 ACTGATCTCCCATCTGCTAGT 57.673 47.619 0.00 0.00 0.00 2.57
4230 4844 2.964464 ACTGATCTCCCATCTGCTAGTG 59.036 50.000 0.00 0.00 0.00 2.74
4231 4845 1.690893 TGATCTCCCATCTGCTAGTGC 59.309 52.381 0.00 0.00 40.20 4.40
4247 4861 5.423886 GCTAGTGCAATTAGGATATCTCCC 58.576 45.833 2.05 0.00 39.75 4.30
4248 4862 5.046304 GCTAGTGCAATTAGGATATCTCCCA 60.046 44.000 2.05 0.00 39.75 4.37
4249 4863 6.352565 GCTAGTGCAATTAGGATATCTCCCAT 60.353 42.308 2.05 0.00 39.75 4.00
4250 4864 6.059787 AGTGCAATTAGGATATCTCCCATC 57.940 41.667 2.05 0.00 43.21 3.51
4251 4865 5.789575 AGTGCAATTAGGATATCTCCCATCT 59.210 40.000 2.05 0.00 43.21 2.90
4252 4866 5.879223 GTGCAATTAGGATATCTCCCATCTG 59.121 44.000 2.05 0.00 43.21 2.90
4253 4867 4.880696 GCAATTAGGATATCTCCCATCTGC 59.119 45.833 2.05 0.65 43.21 4.26
4254 4868 5.339035 GCAATTAGGATATCTCCCATCTGCT 60.339 44.000 2.05 0.00 43.21 4.24
4255 4869 6.126940 GCAATTAGGATATCTCCCATCTGCTA 60.127 42.308 2.05 0.00 43.21 3.49
4256 4870 7.499292 CAATTAGGATATCTCCCATCTGCTAG 58.501 42.308 2.05 0.00 43.21 3.42
4257 4871 4.690767 AGGATATCTCCCATCTGCTAGT 57.309 45.455 2.05 0.00 43.21 2.57
4258 4872 4.352009 AGGATATCTCCCATCTGCTAGTG 58.648 47.826 2.05 0.00 43.21 2.74
4259 4873 4.093011 GGATATCTCCCATCTGCTAGTGT 58.907 47.826 2.05 0.00 35.28 3.55
4260 4874 5.015710 AGGATATCTCCCATCTGCTAGTGTA 59.984 44.000 2.05 0.00 43.21 2.90
4261 4875 5.126384 GGATATCTCCCATCTGCTAGTGTAC 59.874 48.000 2.05 0.00 35.28 2.90
4262 4876 3.671740 TCTCCCATCTGCTAGTGTACT 57.328 47.619 0.00 0.00 0.00 2.73
4263 4877 3.982516 TCTCCCATCTGCTAGTGTACTT 58.017 45.455 0.00 0.00 0.00 2.24
4264 4878 4.353777 TCTCCCATCTGCTAGTGTACTTT 58.646 43.478 0.00 0.00 0.00 2.66
4298 4912 1.681486 TTGCCATCCGTCGCCTATGA 61.681 55.000 2.99 0.00 0.00 2.15
4300 4914 1.222115 GCCATCCGTCGCCTATGAAC 61.222 60.000 2.99 0.00 0.00 3.18
4301 4915 0.939577 CCATCCGTCGCCTATGAACG 60.940 60.000 2.99 0.00 0.00 3.95
4302 4916 0.030235 CATCCGTCGCCTATGAACGA 59.970 55.000 0.00 0.00 35.62 3.85
4412 5052 0.603569 CCTGACGTACAGCCTCTTGT 59.396 55.000 8.85 0.00 44.52 3.16
4413 5053 1.816835 CCTGACGTACAGCCTCTTGTA 59.183 52.381 8.85 0.00 44.52 2.41
4845 5643 3.127533 GCCGAGAGCAACGCCAAT 61.128 61.111 0.00 0.00 42.97 3.16
4997 5885 6.192360 CGTACTTGGCAATTTAGCTAATGTC 58.808 40.000 7.08 5.87 34.40 3.06
5040 5934 8.621532 TTGCATGTCATAGAAGTAAAGTTTCT 57.378 30.769 0.00 0.00 38.40 2.52
5075 5970 9.995594 TTTAATTACAGTCTTAGGAGTAGGGTA 57.004 33.333 0.00 0.00 0.00 3.69
5083 5978 7.179338 CAGTCTTAGGAGTAGGGTATGCAATAT 59.821 40.741 0.00 0.00 0.00 1.28
5254 6178 6.683974 ATGTTAGCAGCCAGTAAACTTATG 57.316 37.500 0.00 0.00 0.00 1.90
5318 6262 5.369685 TGTCACATTTACGCATCATGTTT 57.630 34.783 0.00 0.00 0.00 2.83
5615 6663 1.561542 GTGATCTGGGACCCTTGTGAT 59.438 52.381 13.00 9.97 0.00 3.06
5656 6704 1.153369 CCACCATGGGCGACTACAG 60.153 63.158 18.09 0.00 32.67 2.74
5897 6945 4.718940 ACAAAATGATCCCAATTCGGTC 57.281 40.909 0.00 0.00 0.00 4.79
5903 6951 2.202566 GATCCCAATTCGGTCGAGTTC 58.797 52.381 0.00 0.00 0.00 3.01
5909 6957 3.858238 CCAATTCGGTCGAGTTCTACTTC 59.142 47.826 0.00 0.00 0.00 3.01
6108 7156 5.954335 ACGTTAACTAGCCGTAACTGTATT 58.046 37.500 3.71 0.00 32.22 1.89
6109 7157 6.030228 ACGTTAACTAGCCGTAACTGTATTC 58.970 40.000 3.71 0.00 32.22 1.75
6110 7158 6.127897 ACGTTAACTAGCCGTAACTGTATTCT 60.128 38.462 3.71 0.00 32.22 2.40
6112 7160 7.044445 CGTTAACTAGCCGTAACTGTATTCTTC 60.044 40.741 3.71 0.00 0.00 2.87
6113 7161 5.909621 ACTAGCCGTAACTGTATTCTTCA 57.090 39.130 0.00 0.00 0.00 3.02
6115 7163 6.273825 ACTAGCCGTAACTGTATTCTTCATG 58.726 40.000 0.00 0.00 0.00 3.07
6117 7165 3.560068 GCCGTAACTGTATTCTTCATGGG 59.440 47.826 0.00 0.00 0.00 4.00
6119 7167 5.682990 GCCGTAACTGTATTCTTCATGGGTA 60.683 44.000 0.00 0.00 0.00 3.69
6125 7173 5.667626 ACTGTATTCTTCATGGGTAGGATGT 59.332 40.000 0.00 0.00 0.00 3.06
6126 7174 5.928976 TGTATTCTTCATGGGTAGGATGTG 58.071 41.667 0.00 0.00 0.00 3.21
6127 7175 5.428457 TGTATTCTTCATGGGTAGGATGTGT 59.572 40.000 0.00 0.00 0.00 3.72
6128 7176 3.912496 TCTTCATGGGTAGGATGTGTG 57.088 47.619 0.00 0.00 0.00 3.82
6130 7178 3.055167 TCTTCATGGGTAGGATGTGTGTG 60.055 47.826 0.00 0.00 0.00 3.82
6132 7180 2.027285 TCATGGGTAGGATGTGTGTGTG 60.027 50.000 0.00 0.00 0.00 3.82
6134 7182 1.771854 TGGGTAGGATGTGTGTGTGTT 59.228 47.619 0.00 0.00 0.00 3.32
6135 7183 2.224426 TGGGTAGGATGTGTGTGTGTTC 60.224 50.000 0.00 0.00 0.00 3.18
6136 7184 2.066262 GGTAGGATGTGTGTGTGTTCG 58.934 52.381 0.00 0.00 0.00 3.95
6137 7185 2.547218 GGTAGGATGTGTGTGTGTTCGT 60.547 50.000 0.00 0.00 0.00 3.85
6142 7190 2.603224 TGTGTGTGTGTTCGTGTTTG 57.397 45.000 0.00 0.00 0.00 2.93
6143 7191 1.874231 TGTGTGTGTGTTCGTGTTTGT 59.126 42.857 0.00 0.00 0.00 2.83
6144 7192 2.290916 TGTGTGTGTGTTCGTGTTTGTT 59.709 40.909 0.00 0.00 0.00 2.83
6145 7193 3.243101 TGTGTGTGTGTTCGTGTTTGTTT 60.243 39.130 0.00 0.00 0.00 2.83
6146 7194 3.118809 GTGTGTGTGTTCGTGTTTGTTTG 59.881 43.478 0.00 0.00 0.00 2.93
6147 7195 3.243101 TGTGTGTGTTCGTGTTTGTTTGT 60.243 39.130 0.00 0.00 0.00 2.83
6149 7197 4.207429 GTGTGTGTTCGTGTTTGTTTGTTT 59.793 37.500 0.00 0.00 0.00 2.83
6151 7199 3.736252 TGTGTTCGTGTTTGTTTGTTTGG 59.264 39.130 0.00 0.00 0.00 3.28
6154 7202 5.047847 TGTTCGTGTTTGTTTGTTTGGAAA 58.952 33.333 0.00 0.00 0.00 3.13
6155 7203 5.522460 TGTTCGTGTTTGTTTGTTTGGAAAA 59.478 32.000 0.00 0.00 0.00 2.29
6161 7409 7.800847 CGTGTTTGTTTGTTTGGAAAAGAAAAT 59.199 29.630 0.00 0.00 33.29 1.82
6262 7562 3.107601 TCGTCTGATGGGAGGAGAAATT 58.892 45.455 0.00 0.00 0.00 1.82
6337 7637 2.659016 CTCAAGGTCAGCGAGGCA 59.341 61.111 0.00 0.00 0.00 4.75
7042 8342 1.674764 CTGATGAGACCTCTGCGGCT 61.675 60.000 0.00 0.00 35.61 5.52
7165 8528 3.207669 GCGGCCAATGCTGGAGAG 61.208 66.667 2.24 0.00 46.92 3.20
7439 8804 0.395311 CAAGCACATCAGCCCCATCT 60.395 55.000 0.00 0.00 34.23 2.90
7443 8808 1.129917 CACATCAGCCCCATCTCTCT 58.870 55.000 0.00 0.00 0.00 3.10
7518 8883 1.954382 CAGATGCCAGTGATGAATGGG 59.046 52.381 0.00 0.00 37.05 4.00
7587 8952 4.286320 ACCCCGATCATCGCGCTC 62.286 66.667 5.56 0.00 38.82 5.03
7659 9024 1.003580 GATCTTCACCTGACCAAGCCA 59.996 52.381 0.00 0.00 0.00 4.75
7703 9068 3.436015 CAGATTGTTCTTGACCTCTGCAG 59.564 47.826 7.63 7.63 33.21 4.41
7741 9108 0.175989 GCGGAGATTCTTCGTTCCCT 59.824 55.000 15.54 0.00 34.53 4.20
7742 9109 1.927895 CGGAGATTCTTCGTTCCCTG 58.072 55.000 6.18 0.00 0.00 4.45
7743 9110 1.204941 CGGAGATTCTTCGTTCCCTGT 59.795 52.381 6.18 0.00 0.00 4.00
7744 9111 2.353803 CGGAGATTCTTCGTTCCCTGTT 60.354 50.000 6.18 0.00 0.00 3.16
7745 9112 3.263261 GGAGATTCTTCGTTCCCTGTTC 58.737 50.000 0.00 0.00 0.00 3.18
7746 9113 3.263261 GAGATTCTTCGTTCCCTGTTCC 58.737 50.000 0.00 0.00 0.00 3.62
7747 9114 2.027100 AGATTCTTCGTTCCCTGTTCCC 60.027 50.000 0.00 0.00 0.00 3.97
7748 9115 1.430992 TTCTTCGTTCCCTGTTCCCT 58.569 50.000 0.00 0.00 0.00 4.20
7756 9123 2.351276 CCTGTTCCCTGTTCCCCG 59.649 66.667 0.00 0.00 0.00 5.73
7760 9127 2.122324 TTCCCTGTTCCCCGGTCA 60.122 61.111 0.00 0.00 0.00 4.02
7771 9138 1.563879 TCCCCGGTCACATGATCAAAT 59.436 47.619 0.00 0.00 0.00 2.32
7801 9170 1.611977 GGTGTAGGTGGTTTTTCAGCC 59.388 52.381 0.00 0.00 35.93 4.85
7815 9184 1.154093 CAGCCAGCGAATGCAGTTG 60.154 57.895 0.00 0.00 46.23 3.16
7855 9225 2.904434 ACCCACCTACATCTCGAGTTTT 59.096 45.455 13.13 0.00 0.00 2.43
7868 9238 1.731709 CGAGTTTTGATCATGCGACCA 59.268 47.619 0.00 0.00 0.00 4.02
7929 9299 6.415867 CAGCTGAACTTTGTTGTTGTATCAAG 59.584 38.462 8.42 0.00 0.00 3.02
8027 9398 6.094881 TGGTTAAGTTTTGAGTTCCAGAGTTG 59.905 38.462 0.00 0.00 0.00 3.16
8067 9438 3.512033 TTTTCCGGAGTTTGTGTTTGG 57.488 42.857 3.34 0.00 0.00 3.28
8068 9439 1.394618 TTCCGGAGTTTGTGTTTGGG 58.605 50.000 3.34 0.00 0.00 4.12
8069 9440 0.256464 TCCGGAGTTTGTGTTTGGGT 59.744 50.000 0.00 0.00 0.00 4.51
8070 9441 0.666374 CCGGAGTTTGTGTTTGGGTC 59.334 55.000 0.00 0.00 0.00 4.46
8071 9442 1.675552 CGGAGTTTGTGTTTGGGTCT 58.324 50.000 0.00 0.00 0.00 3.85
8072 9443 1.333619 CGGAGTTTGTGTTTGGGTCTG 59.666 52.381 0.00 0.00 0.00 3.51
8073 9444 2.375146 GGAGTTTGTGTTTGGGTCTGT 58.625 47.619 0.00 0.00 0.00 3.41
8074 9445 2.357952 GGAGTTTGTGTTTGGGTCTGTC 59.642 50.000 0.00 0.00 0.00 3.51
8075 9446 3.279434 GAGTTTGTGTTTGGGTCTGTCT 58.721 45.455 0.00 0.00 0.00 3.41
8076 9447 4.448210 GAGTTTGTGTTTGGGTCTGTCTA 58.552 43.478 0.00 0.00 0.00 2.59
8077 9448 4.451900 AGTTTGTGTTTGGGTCTGTCTAG 58.548 43.478 0.00 0.00 0.00 2.43
8078 9449 2.543777 TGTGTTTGGGTCTGTCTAGC 57.456 50.000 0.00 0.00 0.00 3.42
8079 9450 1.765904 TGTGTTTGGGTCTGTCTAGCA 59.234 47.619 0.00 0.00 0.00 3.49
8080 9451 2.143925 GTGTTTGGGTCTGTCTAGCAC 58.856 52.381 0.00 0.00 0.00 4.40
8081 9452 1.765904 TGTTTGGGTCTGTCTAGCACA 59.234 47.619 0.00 0.00 0.00 4.57
8082 9453 2.143925 GTTTGGGTCTGTCTAGCACAC 58.856 52.381 0.00 0.00 0.00 3.82
8083 9454 1.419381 TTGGGTCTGTCTAGCACACA 58.581 50.000 0.00 0.00 0.00 3.72
8084 9455 1.644509 TGGGTCTGTCTAGCACACAT 58.355 50.000 0.00 0.00 0.00 3.21
8085 9456 1.550524 TGGGTCTGTCTAGCACACATC 59.449 52.381 0.00 0.00 0.00 3.06
8086 9457 1.827969 GGGTCTGTCTAGCACACATCT 59.172 52.381 0.00 0.00 0.00 2.90
8087 9458 3.024547 GGGTCTGTCTAGCACACATCTA 58.975 50.000 0.00 0.00 0.00 1.98
8088 9459 3.067461 GGGTCTGTCTAGCACACATCTAG 59.933 52.174 0.00 0.00 35.90 2.43
8089 9460 3.948473 GGTCTGTCTAGCACACATCTAGA 59.052 47.826 0.00 0.00 39.94 2.43
8090 9461 4.582656 GGTCTGTCTAGCACACATCTAGAT 59.417 45.833 0.00 0.00 42.90 1.98
8091 9462 5.507149 GGTCTGTCTAGCACACATCTAGATG 60.507 48.000 27.63 27.63 42.90 2.90
8119 9490 8.306313 ACATAGTTATGTCACATCTAACCTGA 57.694 34.615 0.00 0.00 42.96 3.86
8120 9491 8.928448 ACATAGTTATGTCACATCTAACCTGAT 58.072 33.333 0.00 0.00 42.96 2.90
8124 9495 7.928706 AGTTATGTCACATCTAACCTGATAAGC 59.071 37.037 0.00 0.00 0.00 3.09
8125 9496 5.675684 TGTCACATCTAACCTGATAAGCA 57.324 39.130 0.00 0.00 0.00 3.91
8126 9497 5.419542 TGTCACATCTAACCTGATAAGCAC 58.580 41.667 0.00 0.00 0.00 4.40
8127 9498 5.187772 TGTCACATCTAACCTGATAAGCACT 59.812 40.000 0.00 0.00 0.00 4.40
8128 9499 6.379988 TGTCACATCTAACCTGATAAGCACTA 59.620 38.462 0.00 0.00 0.00 2.74
8129 9500 7.069950 TGTCACATCTAACCTGATAAGCACTAT 59.930 37.037 0.00 0.00 0.00 2.12
8130 9501 7.383572 GTCACATCTAACCTGATAAGCACTATG 59.616 40.741 0.00 0.00 0.00 2.23
8131 9502 7.069950 TCACATCTAACCTGATAAGCACTATGT 59.930 37.037 0.00 0.00 0.00 2.29
8132 9503 7.712639 CACATCTAACCTGATAAGCACTATGTT 59.287 37.037 0.00 0.00 0.00 2.71
8133 9504 8.267894 ACATCTAACCTGATAAGCACTATGTTT 58.732 33.333 0.00 0.00 0.00 2.83
8134 9505 8.554528 CATCTAACCTGATAAGCACTATGTTTG 58.445 37.037 0.00 0.00 0.00 2.93
8135 9506 7.620880 TCTAACCTGATAAGCACTATGTTTGT 58.379 34.615 0.00 0.00 0.00 2.83
8136 9507 6.500684 AACCTGATAAGCACTATGTTTGTG 57.499 37.500 0.00 0.00 38.36 3.33
8137 9508 4.943705 ACCTGATAAGCACTATGTTTGTGG 59.056 41.667 0.00 0.00 36.08 4.17
8138 9509 4.943705 CCTGATAAGCACTATGTTTGTGGT 59.056 41.667 0.00 0.00 46.30 4.16
8139 9510 5.065218 CCTGATAAGCACTATGTTTGTGGTC 59.935 44.000 0.00 0.00 44.03 4.02
8140 9511 5.804639 TGATAAGCACTATGTTTGTGGTCT 58.195 37.500 0.00 0.00 44.03 3.85
8141 9512 6.941857 TGATAAGCACTATGTTTGTGGTCTA 58.058 36.000 0.00 0.00 44.03 2.59
8142 9513 7.564793 TGATAAGCACTATGTTTGTGGTCTAT 58.435 34.615 0.00 0.00 44.03 1.98
8143 9514 8.046708 TGATAAGCACTATGTTTGTGGTCTATT 58.953 33.333 0.00 0.00 44.03 1.73
8144 9515 8.807948 ATAAGCACTATGTTTGTGGTCTATTT 57.192 30.769 0.00 0.00 44.03 1.40
8145 9516 7.524717 AAGCACTATGTTTGTGGTCTATTTT 57.475 32.000 0.00 0.00 44.03 1.82
8146 9517 7.524717 AGCACTATGTTTGTGGTCTATTTTT 57.475 32.000 0.00 0.00 41.52 1.94
8193 9564 9.816354 ATTTCTTGTTGCTGTGTAGTTATTTTT 57.184 25.926 0.00 0.00 0.00 1.94
8195 9566 9.944663 TTCTTGTTGCTGTGTAGTTATTTTTAG 57.055 29.630 0.00 0.00 0.00 1.85
8196 9567 9.332502 TCTTGTTGCTGTGTAGTTATTTTTAGA 57.667 29.630 0.00 0.00 0.00 2.10
8197 9568 9.944663 CTTGTTGCTGTGTAGTTATTTTTAGAA 57.055 29.630 0.00 0.00 0.00 2.10
8198 9569 9.944663 TTGTTGCTGTGTAGTTATTTTTAGAAG 57.055 29.630 0.00 0.00 0.00 2.85
8199 9570 8.564574 TGTTGCTGTGTAGTTATTTTTAGAAGG 58.435 33.333 0.00 0.00 0.00 3.46
8200 9571 8.565416 GTTGCTGTGTAGTTATTTTTAGAAGGT 58.435 33.333 0.00 0.00 0.00 3.50
8201 9572 8.685838 TGCTGTGTAGTTATTTTTAGAAGGTT 57.314 30.769 0.00 0.00 0.00 3.50
8202 9573 9.781633 TGCTGTGTAGTTATTTTTAGAAGGTTA 57.218 29.630 0.00 0.00 0.00 2.85
8214 9585 9.739276 ATTTTTAGAAGGTTAGATGTGACATCA 57.261 29.630 25.68 10.40 0.00 3.07
8215 9586 8.547967 TTTTAGAAGGTTAGATGTGACATCAC 57.452 34.615 25.68 16.16 46.59 3.06
8216 9587 7.482169 TTAGAAGGTTAGATGTGACATCACT 57.518 36.000 25.68 15.15 46.55 3.41
8217 9588 8.589701 TTAGAAGGTTAGATGTGACATCACTA 57.410 34.615 25.68 9.13 46.55 2.74
8218 9589 7.482169 AGAAGGTTAGATGTGACATCACTAA 57.518 36.000 25.68 14.23 46.55 2.24
8219 9590 7.907389 AGAAGGTTAGATGTGACATCACTAAA 58.093 34.615 25.68 12.15 46.55 1.85
8220 9591 8.375506 AGAAGGTTAGATGTGACATCACTAAAA 58.624 33.333 25.68 9.96 46.55 1.52
8221 9592 8.918202 AAGGTTAGATGTGACATCACTAAAAA 57.082 30.769 25.68 8.41 46.55 1.94
8305 9676 1.941377 TTGCTTCCATTGCCCATTCT 58.059 45.000 0.00 0.00 0.00 2.40
8307 9678 1.006281 TGCTTCCATTGCCCATTCTCT 59.994 47.619 0.00 0.00 0.00 3.10
8337 9708 6.613153 AGAAAGTACAGATTCCTACAAGCT 57.387 37.500 0.00 0.00 0.00 3.74
8349 9720 5.296151 TCCTACAAGCTATGAAATCCCTG 57.704 43.478 0.00 0.00 0.00 4.45
8360 9731 2.050918 GAAATCCCTGGCTAGCTACCT 58.949 52.381 15.72 0.00 0.00 3.08
8361 9732 2.198334 AATCCCTGGCTAGCTACCTT 57.802 50.000 15.72 0.00 0.00 3.50
8362 9733 1.428869 ATCCCTGGCTAGCTACCTTG 58.571 55.000 15.72 0.00 0.00 3.61
8363 9734 0.042731 TCCCTGGCTAGCTACCTTGT 59.957 55.000 15.72 0.00 0.00 3.16
8436 9807 2.137810 ACAGTCTCCTCTAGGTCTGC 57.862 55.000 13.85 0.00 35.13 4.26
8445 9816 2.175202 CTCTAGGTCTGCAGTGGACTT 58.825 52.381 14.67 3.95 34.47 3.01
8455 9826 3.343617 TGCAGTGGACTTGCCTAAATAC 58.656 45.455 0.00 0.00 37.63 1.89
8458 9829 4.811557 GCAGTGGACTTGCCTAAATACTAG 59.188 45.833 0.00 0.00 37.63 2.57
8464 9838 8.858094 GTGGACTTGCCTAAATACTAGTACTAT 58.142 37.037 4.31 0.00 37.63 2.12
8516 9890 1.418264 TCACACCCGAGGTCATTTTCA 59.582 47.619 0.00 0.00 31.02 2.69
8517 9891 2.039746 TCACACCCGAGGTCATTTTCAT 59.960 45.455 0.00 0.00 31.02 2.57
8522 9896 4.158394 CACCCGAGGTCATTTTCATTGAAT 59.842 41.667 0.00 0.00 31.02 2.57
8535 9909 1.464608 CATTGAATGGCACTTCGTCGT 59.535 47.619 0.00 0.00 0.00 4.34
8553 9927 1.798223 CGTTCTCCTGCGTTGAAATCA 59.202 47.619 0.00 0.00 0.00 2.57
8559 9933 4.578516 TCTCCTGCGTTGAAATCAGAAAAA 59.421 37.500 0.00 0.00 0.00 1.94
8570 9944 7.042797 TGAAATCAGAAAAAGGGTTCAGAAG 57.957 36.000 0.00 0.00 0.00 2.85
8573 9947 7.660030 AATCAGAAAAAGGGTTCAGAAGAAA 57.340 32.000 0.00 0.00 35.08 2.52
8580 9954 4.184649 AGGGTTCAGAAGAAACACCATT 57.815 40.909 0.00 0.00 43.42 3.16
8581 9955 3.891366 AGGGTTCAGAAGAAACACCATTG 59.109 43.478 0.00 0.00 43.42 2.82
8585 9959 6.337356 GGTTCAGAAGAAACACCATTGAAAA 58.663 36.000 0.00 0.00 41.22 2.29
8590 9964 8.786898 TCAGAAGAAACACCATTGAAAATCTAG 58.213 33.333 0.00 0.00 0.00 2.43
8600 9974 7.013655 CACCATTGAAAATCTAGGAACATAGGG 59.986 40.741 0.00 0.00 0.00 3.53
8603 9977 8.971073 CATTGAAAATCTAGGAACATAGGGTTT 58.029 33.333 0.00 0.00 40.63 3.27
8605 9979 9.457436 TTGAAAATCTAGGAACATAGGGTTTAC 57.543 33.333 0.00 0.00 40.63 2.01
8606 9980 8.832735 TGAAAATCTAGGAACATAGGGTTTACT 58.167 33.333 0.00 0.00 40.63 2.24
8607 9981 9.682465 GAAAATCTAGGAACATAGGGTTTACTT 57.318 33.333 0.00 0.00 40.63 2.24
8610 9984 7.357429 TCTAGGAACATAGGGTTTACTTAGC 57.643 40.000 0.00 0.00 40.63 3.09
8611 9985 7.130775 TCTAGGAACATAGGGTTTACTTAGCT 58.869 38.462 0.00 0.00 40.63 3.32
8612 9986 6.638021 AGGAACATAGGGTTTACTTAGCTT 57.362 37.500 0.00 0.00 40.63 3.74
8613 9987 6.651086 AGGAACATAGGGTTTACTTAGCTTC 58.349 40.000 0.00 0.00 40.63 3.86
8614 9988 5.522824 GGAACATAGGGTTTACTTAGCTTCG 59.477 44.000 0.00 0.00 40.63 3.79
8615 9989 5.927281 ACATAGGGTTTACTTAGCTTCGA 57.073 39.130 0.00 0.00 0.00 3.71
8616 9990 6.481434 ACATAGGGTTTACTTAGCTTCGAT 57.519 37.500 0.00 0.00 0.00 3.59
8617 9991 6.514063 ACATAGGGTTTACTTAGCTTCGATC 58.486 40.000 0.00 0.00 0.00 3.69
8618 9992 6.097839 ACATAGGGTTTACTTAGCTTCGATCA 59.902 38.462 0.00 0.00 0.00 2.92
8619 9993 5.012328 AGGGTTTACTTAGCTTCGATCAG 57.988 43.478 0.00 0.00 0.00 2.90
8620 9994 4.466726 AGGGTTTACTTAGCTTCGATCAGT 59.533 41.667 0.00 0.00 0.00 3.41
8621 9995 4.567159 GGGTTTACTTAGCTTCGATCAGTG 59.433 45.833 0.00 0.00 0.00 3.66
8622 9996 4.033014 GGTTTACTTAGCTTCGATCAGTGC 59.967 45.833 0.00 0.00 0.00 4.40
8623 9997 4.450082 TTACTTAGCTTCGATCAGTGCA 57.550 40.909 0.00 0.00 0.00 4.57
8632 10006 3.454042 TCGATCAGTGCAAACGATTTG 57.546 42.857 0.00 0.00 43.44 2.32
8645 10019 6.090628 TGCAAACGATTTGAAAGGAAATATGC 59.909 34.615 12.62 0.00 43.26 3.14
8648 10022 7.639113 AACGATTTGAAAGGAAATATGCCTA 57.361 32.000 0.00 0.00 33.76 3.93
8652 10026 6.633500 TTTGAAAGGAAATATGCCTATCCG 57.367 37.500 0.00 0.00 37.05 4.18
8668 10042 7.479980 TGCCTATCCGAAATAGTGAAATTTTG 58.520 34.615 0.00 0.00 32.25 2.44
8669 10043 7.338196 TGCCTATCCGAAATAGTGAAATTTTGA 59.662 33.333 0.00 0.00 33.68 2.69
8670 10044 7.857885 GCCTATCCGAAATAGTGAAATTTTGAG 59.142 37.037 0.00 0.00 33.68 3.02
8671 10045 8.345565 CCTATCCGAAATAGTGAAATTTTGAGG 58.654 37.037 0.00 0.00 33.68 3.86
8672 10046 6.509418 TCCGAAATAGTGAAATTTTGAGGG 57.491 37.500 0.00 0.00 33.68 4.30
8673 10047 5.417580 TCCGAAATAGTGAAATTTTGAGGGG 59.582 40.000 0.00 0.00 33.68 4.79
8674 10048 5.394115 CCGAAATAGTGAAATTTTGAGGGGG 60.394 44.000 0.00 0.00 33.68 5.40
8694 10068 4.080526 GGGGGAAGAGTAAAGTCAAGCATA 60.081 45.833 0.00 0.00 0.00 3.14
8700 10074 7.064016 GGAAGAGTAAAGTCAAGCATAACTGAG 59.936 40.741 0.00 0.00 0.00 3.35
8703 10077 6.534634 AGTAAAGTCAAGCATAACTGAGGTT 58.465 36.000 0.00 0.00 39.26 3.50
8814 10188 2.073252 ACATATCGGTCTGCTCAGGA 57.927 50.000 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.265055 TGTAGCTTATTTGCCTCACTATTACTT 58.735 33.333 0.00 0.00 0.00 2.24
6 7 9.224267 CATATGTAGCTTATTTGCCTCACTATT 57.776 33.333 0.00 0.00 0.00 1.73
144 149 1.299620 CCGTTCGTGTGAGACCGTT 60.300 57.895 0.00 0.00 0.00 4.44
161 166 2.772287 GAGTGGGCAATATGTAGAGCC 58.228 52.381 0.00 0.00 46.28 4.70
257 262 7.065683 TGCGTTAATTATCAGCTGAAAATCTCA 59.934 33.333 22.50 7.96 0.00 3.27
274 279 5.050769 CGATGCTCTGTCTAATGCGTTAATT 60.051 40.000 0.00 0.00 0.00 1.40
298 303 4.966850 TTCAAACTTGATCGACTCGTTC 57.033 40.909 0.00 0.38 37.00 3.95
304 309 8.922676 TGACTTACTTATTCAAACTTGATCGAC 58.077 33.333 0.00 0.00 37.00 4.20
311 329 6.998673 AGCCTGTGACTTACTTATTCAAACTT 59.001 34.615 0.00 0.00 0.00 2.66
625 679 1.624813 TCCCGTTCGAATAGTTTGGGT 59.375 47.619 0.00 0.00 36.53 4.51
736 790 5.750547 CGATATCTAATATCAATGCACGGCT 59.249 40.000 0.34 0.00 41.31 5.52
842 896 4.520492 CACTTTTGGCAGTATTTCTCCTGT 59.480 41.667 0.00 0.00 0.00 4.00
936 990 7.231467 AGGAATACACTTTACACATTGAAGGT 58.769 34.615 0.00 0.00 0.00 3.50
939 993 6.370442 CGGAGGAATACACTTTACACATTGAA 59.630 38.462 0.00 0.00 0.00 2.69
940 994 5.872617 CGGAGGAATACACTTTACACATTGA 59.127 40.000 0.00 0.00 0.00 2.57
1007 1062 6.638468 CAGAAGCAAATCTTTGTTAGGTGTTC 59.362 38.462 4.71 0.00 40.24 3.18
1127 1183 7.617041 AAGAAGCCAAGTACTATGAATGTTC 57.383 36.000 0.00 0.00 0.00 3.18
1221 1283 4.834496 ACCAAGAAATGAGAAAAGCCATGA 59.166 37.500 0.00 0.00 0.00 3.07
1324 1387 8.739972 GCTTAAGTAAGATGAATCCCTCAAAAA 58.260 33.333 4.02 0.00 34.13 1.94
1397 1460 7.040617 ACCGTACCACTACATAGATCTATTGTG 60.041 40.741 21.59 21.59 0.00 3.33
1448 1511 2.044806 CTATGCCAAGAGACCGGGGG 62.045 65.000 6.32 0.00 0.00 5.40
1715 1787 5.365605 AGGATATCCATCTTGTACGGAACAA 59.634 40.000 23.81 5.61 41.38 2.83
1718 1790 5.723672 GAGGATATCCATCTTGTACGGAA 57.276 43.478 23.81 0.00 38.89 4.30
1742 1814 3.889196 TTCATGCCTAAAACACACGTC 57.111 42.857 0.00 0.00 0.00 4.34
1820 1892 4.389374 ACACAGGTGAAAGGACACTAATG 58.611 43.478 6.40 0.00 40.22 1.90
1878 1950 6.595716 ACGGAGCAGAAGCCAAATTATATATC 59.404 38.462 0.00 0.00 43.56 1.63
1947 2038 5.617252 TCATACGACAAAAGGGAGTTCTTT 58.383 37.500 0.00 0.00 38.48 2.52
1970 2061 5.476945 GGTGACCAGAAAAACAACATAGGAT 59.523 40.000 0.00 0.00 0.00 3.24
1977 2068 2.162809 ACACGGTGACCAGAAAAACAAC 59.837 45.455 16.29 0.00 0.00 3.32
1993 2084 3.492656 CCATGGGTAGATCTAACACACGG 60.493 52.174 19.35 12.41 31.92 4.94
1994 2085 3.383505 TCCATGGGTAGATCTAACACACG 59.616 47.826 19.35 7.58 31.92 4.49
1997 2088 6.357367 ACAATTCCATGGGTAGATCTAACAC 58.643 40.000 19.35 9.33 0.00 3.32
1999 2090 7.881775 AAACAATTCCATGGGTAGATCTAAC 57.118 36.000 13.02 9.47 0.00 2.34
2000 2091 8.893563 AAAAACAATTCCATGGGTAGATCTAA 57.106 30.769 13.02 0.00 0.00 2.10
2001 2092 8.336235 AGAAAAACAATTCCATGGGTAGATCTA 58.664 33.333 13.02 0.00 0.00 1.98
2003 2094 7.260603 CAGAAAAACAATTCCATGGGTAGATC 58.739 38.462 13.02 1.46 0.00 2.75
2006 2097 5.245977 ACCAGAAAAACAATTCCATGGGTAG 59.754 40.000 13.02 2.32 31.97 3.18
2008 2099 3.973305 ACCAGAAAAACAATTCCATGGGT 59.027 39.130 13.02 0.00 31.97 4.51
2009 2100 4.040217 TGACCAGAAAAACAATTCCATGGG 59.960 41.667 13.02 0.00 31.97 4.00
2010 2101 4.990426 GTGACCAGAAAAACAATTCCATGG 59.010 41.667 4.97 4.97 33.23 3.66
2011 2102 4.990426 GGTGACCAGAAAAACAATTCCATG 59.010 41.667 0.00 0.00 0.00 3.66
2012 2103 4.261994 CGGTGACCAGAAAAACAATTCCAT 60.262 41.667 1.11 0.00 0.00 3.41
2013 2104 3.067461 CGGTGACCAGAAAAACAATTCCA 59.933 43.478 1.11 0.00 0.00 3.53
2014 2105 3.067601 ACGGTGACCAGAAAAACAATTCC 59.932 43.478 1.11 0.00 0.00 3.01
2015 2106 4.041723 CACGGTGACCAGAAAAACAATTC 58.958 43.478 0.74 0.00 0.00 2.17
2016 2107 3.445805 ACACGGTGACCAGAAAAACAATT 59.554 39.130 16.29 0.00 0.00 2.32
2017 2108 3.020984 ACACGGTGACCAGAAAAACAAT 58.979 40.909 16.29 0.00 0.00 2.71
2018 2109 2.162608 CACACGGTGACCAGAAAAACAA 59.837 45.455 16.29 0.00 35.23 2.83
2019 2110 1.740585 CACACGGTGACCAGAAAAACA 59.259 47.619 16.29 0.00 35.23 2.83
2020 2111 1.741145 ACACACGGTGACCAGAAAAAC 59.259 47.619 16.29 0.00 36.96 2.43
2021 2112 2.116827 ACACACGGTGACCAGAAAAA 57.883 45.000 16.29 0.00 36.96 1.94
2022 2113 2.116827 AACACACGGTGACCAGAAAA 57.883 45.000 16.29 0.00 36.96 2.29
2023 2114 2.431419 TCTAACACACGGTGACCAGAAA 59.569 45.455 16.29 0.00 36.96 2.52
2024 2115 2.033372 TCTAACACACGGTGACCAGAA 58.967 47.619 16.29 0.00 36.96 3.02
2025 2116 1.694844 TCTAACACACGGTGACCAGA 58.305 50.000 16.29 8.50 36.96 3.86
2026 2117 2.231478 AGATCTAACACACGGTGACCAG 59.769 50.000 16.29 6.33 36.96 4.00
2027 2118 2.244695 AGATCTAACACACGGTGACCA 58.755 47.619 16.29 0.00 36.96 4.02
2028 2119 3.428589 GGTAGATCTAACACACGGTGACC 60.429 52.174 16.29 3.87 36.96 4.02
2029 2120 3.428589 GGGTAGATCTAACACACGGTGAC 60.429 52.174 19.35 0.00 36.96 3.67
2030 2121 2.756760 GGGTAGATCTAACACACGGTGA 59.243 50.000 19.35 0.00 36.96 4.02
2031 2122 2.494471 TGGGTAGATCTAACACACGGTG 59.506 50.000 19.35 6.58 39.75 4.94
2032 2123 2.811410 TGGGTAGATCTAACACACGGT 58.189 47.619 19.35 0.00 0.00 4.83
2187 2340 5.045215 ATTGTGTTTCAACTCGTCTAACGA 58.955 37.500 1.90 1.90 42.75 3.85
2208 2361 2.255252 GACAAGCGGCGTTGCATT 59.745 55.556 9.37 0.00 37.31 3.56
2209 2362 4.088762 CGACAAGCGGCGTTGCAT 62.089 61.111 9.37 0.00 37.31 3.96
2330 2484 6.636850 GCAATAAAAGTGTGACGTCAGATTTT 59.363 34.615 24.39 24.39 32.06 1.82
2332 2486 5.238432 TGCAATAAAAGTGTGACGTCAGATT 59.762 36.000 20.73 12.29 0.00 2.40
2374 2533 1.509644 CCACGATGATTCCATGGGCG 61.510 60.000 13.02 8.91 33.46 6.13
2403 2562 4.109050 CGAGATGAAAGAGTAAGCCAGAC 58.891 47.826 0.00 0.00 0.00 3.51
2407 2566 3.109619 CGACGAGATGAAAGAGTAAGCC 58.890 50.000 0.00 0.00 0.00 4.35
2557 2728 9.923143 ATTACGTATCGGAAATAAGATGATTCA 57.077 29.630 0.00 0.00 31.83 2.57
3135 3434 2.120940 TTGGGTAGGTGCTCCGGA 59.879 61.111 2.93 2.93 39.05 5.14
3628 3946 0.443869 GATAGGCTGTGTGCACGTTG 59.556 55.000 13.13 5.40 45.15 4.10
3641 3959 4.448060 GCACAGGAATTACGTTAGATAGGC 59.552 45.833 0.00 0.00 0.00 3.93
3647 3965 9.567848 AAAAATAATGCACAGGAATTACGTTAG 57.432 29.630 0.00 0.00 27.07 2.34
3650 3968 7.375053 ACAAAAATAATGCACAGGAATTACGT 58.625 30.769 0.00 0.00 27.07 3.57
3652 3970 8.755696 TGACAAAAATAATGCACAGGAATTAC 57.244 30.769 0.00 0.00 27.07 1.89
3653 3971 9.421806 CTTGACAAAAATAATGCACAGGAATTA 57.578 29.630 0.00 0.00 0.00 1.40
3655 3973 7.669427 TCTTGACAAAAATAATGCACAGGAAT 58.331 30.769 0.00 0.00 0.00 3.01
3656 3974 7.048629 TCTTGACAAAAATAATGCACAGGAA 57.951 32.000 0.00 0.00 0.00 3.36
3658 3976 6.925165 AGTTCTTGACAAAAATAATGCACAGG 59.075 34.615 0.00 0.00 0.00 4.00
3659 3977 7.935338 AGTTCTTGACAAAAATAATGCACAG 57.065 32.000 0.00 0.00 0.00 3.66
3662 3980 9.638239 GGATTAGTTCTTGACAAAAATAATGCA 57.362 29.630 18.25 0.00 35.33 3.96
3663 3981 9.087424 GGGATTAGTTCTTGACAAAAATAATGC 57.913 33.333 16.66 16.66 34.85 3.56
3667 3985 7.450014 TGCTGGGATTAGTTCTTGACAAAAATA 59.550 33.333 0.00 0.00 0.00 1.40
3682 4001 8.734386 GGAAGAAATATTACATGCTGGGATTAG 58.266 37.037 0.00 0.00 0.00 1.73
3824 4426 4.184629 CTCCAAGTCGGAAGGATGTTTAG 58.815 47.826 0.00 0.00 45.75 1.85
3894 4501 3.671702 GCGAAAGGAAGGAAGCAAGATTG 60.672 47.826 0.00 0.00 0.00 2.67
4030 4640 2.107552 TCCGTTTGGGGAAGAACAGAAT 59.892 45.455 0.00 0.00 36.01 2.40
4069 4679 1.377366 GGAGACGATCGAGCTCACCA 61.377 60.000 29.35 0.00 0.00 4.17
4189 4803 0.812014 TTCAAACCAGCGCTCGTTCA 60.812 50.000 20.74 8.04 0.00 3.18
4190 4804 0.306533 TTTCAAACCAGCGCTCGTTC 59.693 50.000 20.74 0.00 0.00 3.95
4191 4805 0.028902 GTTTCAAACCAGCGCTCGTT 59.971 50.000 15.01 15.01 0.00 3.85
4193 4807 0.384725 CAGTTTCAAACCAGCGCTCG 60.385 55.000 7.13 2.49 0.00 5.03
4194 4808 0.944386 TCAGTTTCAAACCAGCGCTC 59.056 50.000 7.13 0.00 0.00 5.03
4197 4811 2.160417 GGAGATCAGTTTCAAACCAGCG 59.840 50.000 0.00 0.00 0.00 5.18
4198 4812 2.489722 GGGAGATCAGTTTCAAACCAGC 59.510 50.000 0.00 0.00 0.00 4.85
4199 4813 3.754965 TGGGAGATCAGTTTCAAACCAG 58.245 45.455 0.00 0.00 0.00 4.00
4200 4814 3.874383 TGGGAGATCAGTTTCAAACCA 57.126 42.857 0.00 0.00 0.00 3.67
4202 4816 4.142513 GCAGATGGGAGATCAGTTTCAAAC 60.143 45.833 0.00 0.00 0.00 2.93
4203 4817 4.012374 GCAGATGGGAGATCAGTTTCAAA 58.988 43.478 0.00 0.00 0.00 2.69
4205 4819 2.842496 AGCAGATGGGAGATCAGTTTCA 59.158 45.455 0.00 0.00 0.00 2.69
4206 4820 3.557228 AGCAGATGGGAGATCAGTTTC 57.443 47.619 0.00 0.00 0.00 2.78
4208 4822 3.387374 CACTAGCAGATGGGAGATCAGTT 59.613 47.826 0.00 0.00 0.00 3.16
4209 4823 2.964464 CACTAGCAGATGGGAGATCAGT 59.036 50.000 0.00 0.00 0.00 3.41
4211 4825 1.690893 GCACTAGCAGATGGGAGATCA 59.309 52.381 0.00 0.00 41.58 2.92
4224 4838 5.046304 TGGGAGATATCCTAATTGCACTAGC 60.046 44.000 6.30 0.00 42.57 3.42
4225 4839 6.611613 TGGGAGATATCCTAATTGCACTAG 57.388 41.667 6.30 0.00 0.00 2.57
4226 4840 6.962311 AGATGGGAGATATCCTAATTGCACTA 59.038 38.462 6.30 0.00 0.00 2.74
4227 4841 5.789575 AGATGGGAGATATCCTAATTGCACT 59.210 40.000 6.30 0.00 0.00 4.40
4228 4842 5.879223 CAGATGGGAGATATCCTAATTGCAC 59.121 44.000 6.30 0.00 0.00 4.57
4229 4843 5.572271 GCAGATGGGAGATATCCTAATTGCA 60.572 44.000 19.86 5.39 0.00 4.08
4230 4844 4.880696 GCAGATGGGAGATATCCTAATTGC 59.119 45.833 13.39 13.39 0.00 3.56
4231 4845 6.310764 AGCAGATGGGAGATATCCTAATTG 57.689 41.667 6.30 4.59 0.00 2.32
4232 4846 7.125507 CACTAGCAGATGGGAGATATCCTAATT 59.874 40.741 6.30 0.00 0.00 1.40
4233 4847 6.610830 CACTAGCAGATGGGAGATATCCTAAT 59.389 42.308 6.30 0.48 0.00 1.73
4234 4848 5.954752 CACTAGCAGATGGGAGATATCCTAA 59.045 44.000 6.30 0.00 0.00 2.69
4235 4849 5.015710 ACACTAGCAGATGGGAGATATCCTA 59.984 44.000 6.30 0.00 0.00 2.94
4236 4850 4.202770 ACACTAGCAGATGGGAGATATCCT 60.203 45.833 6.30 0.00 0.00 3.24
4237 4851 4.093011 ACACTAGCAGATGGGAGATATCC 58.907 47.826 0.00 0.00 0.00 2.59
4238 4852 5.949354 AGTACACTAGCAGATGGGAGATATC 59.051 44.000 0.00 0.00 0.00 1.63
4239 4853 5.898120 AGTACACTAGCAGATGGGAGATAT 58.102 41.667 0.00 0.00 0.00 1.63
4240 4854 5.326283 AGTACACTAGCAGATGGGAGATA 57.674 43.478 0.00 0.00 0.00 1.98
4241 4855 4.191804 AGTACACTAGCAGATGGGAGAT 57.808 45.455 0.00 0.00 0.00 2.75
4242 4856 3.671740 AGTACACTAGCAGATGGGAGA 57.328 47.619 0.00 0.00 0.00 3.71
4243 4857 4.744795 AAAGTACACTAGCAGATGGGAG 57.255 45.455 0.00 0.00 0.00 4.30
4244 4858 6.808321 ATAAAAGTACACTAGCAGATGGGA 57.192 37.500 0.00 0.00 0.00 4.37
4245 4859 7.047891 TCAATAAAAGTACACTAGCAGATGGG 58.952 38.462 0.00 0.00 0.00 4.00
4246 4860 8.492673 TTCAATAAAAGTACACTAGCAGATGG 57.507 34.615 0.00 0.00 0.00 3.51
4247 4861 9.760660 GTTTCAATAAAAGTACACTAGCAGATG 57.239 33.333 0.00 0.00 0.00 2.90
4248 4862 9.726438 AGTTTCAATAAAAGTACACTAGCAGAT 57.274 29.630 0.00 0.00 0.00 2.90
4249 4863 8.988934 CAGTTTCAATAAAAGTACACTAGCAGA 58.011 33.333 0.00 0.00 0.00 4.26
4250 4864 8.988934 TCAGTTTCAATAAAAGTACACTAGCAG 58.011 33.333 0.00 0.00 0.00 4.24
4251 4865 8.896320 TCAGTTTCAATAAAAGTACACTAGCA 57.104 30.769 0.00 0.00 0.00 3.49
4252 4866 9.974750 GATCAGTTTCAATAAAAGTACACTAGC 57.025 33.333 0.00 0.00 0.00 3.42
4256 4870 9.118236 GCAAGATCAGTTTCAATAAAAGTACAC 57.882 33.333 0.00 0.00 0.00 2.90
4257 4871 8.296713 GGCAAGATCAGTTTCAATAAAAGTACA 58.703 33.333 0.00 0.00 0.00 2.90
4258 4872 8.296713 TGGCAAGATCAGTTTCAATAAAAGTAC 58.703 33.333 0.00 0.00 0.00 2.73
4259 4873 8.402798 TGGCAAGATCAGTTTCAATAAAAGTA 57.597 30.769 0.00 0.00 0.00 2.24
4260 4874 7.288810 TGGCAAGATCAGTTTCAATAAAAGT 57.711 32.000 0.00 0.00 0.00 2.66
4261 4875 7.490402 GGATGGCAAGATCAGTTTCAATAAAAG 59.510 37.037 0.00 0.00 0.00 2.27
4262 4876 7.322664 GGATGGCAAGATCAGTTTCAATAAAA 58.677 34.615 0.00 0.00 0.00 1.52
4263 4877 6.404623 CGGATGGCAAGATCAGTTTCAATAAA 60.405 38.462 0.00 0.00 0.00 1.40
4264 4878 5.066375 CGGATGGCAAGATCAGTTTCAATAA 59.934 40.000 0.00 0.00 0.00 1.40
4298 4912 1.803334 TTATCAAACCAGCGCTCGTT 58.197 45.000 15.01 15.01 0.00 3.85
4300 4914 2.609459 AGAATTATCAAACCAGCGCTCG 59.391 45.455 7.13 2.49 0.00 5.03
4301 4915 3.002759 GGAGAATTATCAAACCAGCGCTC 59.997 47.826 7.13 0.00 0.00 5.03
4302 4916 2.945668 GGAGAATTATCAAACCAGCGCT 59.054 45.455 2.64 2.64 0.00 5.92
4372 5012 3.428862 GGTTGTTTCCATGGCCTTTATCG 60.429 47.826 6.96 0.00 0.00 2.92
4419 5116 9.779237 CGTGCTATACTACGAAGAAAATAATTG 57.221 33.333 0.00 0.00 42.54 2.32
4471 5260 0.527817 GATACTTGTCAGCCGTCCCG 60.528 60.000 0.00 0.00 0.00 5.14
4845 5643 3.201487 TCTGGTCGAGGTTATAGGTGAGA 59.799 47.826 0.00 0.00 0.00 3.27
5014 5904 9.236006 AGAAACTTTACTTCTATGACATGCAAT 57.764 29.630 0.00 0.00 31.28 3.56
5067 5961 3.264450 GCTGGGATATTGCATACCCTACT 59.736 47.826 15.48 0.00 42.49 2.57
5072 5966 3.146104 ACAGCTGGGATATTGCATACC 57.854 47.619 19.93 0.00 0.00 2.73
5075 5970 5.879763 TGTATAACAGCTGGGATATTGCAT 58.120 37.500 19.93 0.00 0.00 3.96
5083 5978 6.321821 ACCTTAAATGTATAACAGCTGGGA 57.678 37.500 19.93 5.36 0.00 4.37
5212 6136 8.642885 GCTAACATAGTGATATCTGACAATTCG 58.357 37.037 3.98 0.00 0.00 3.34
5318 6262 2.730715 GCACTCAAAGACACGCACAAAA 60.731 45.455 0.00 0.00 0.00 2.44
5388 6356 6.432162 ACATATGCTCAGTTGAGAACACAAAT 59.568 34.615 13.13 0.00 44.74 2.32
5401 6420 5.349061 TGATGAGTCAACATATGCTCAGT 57.651 39.130 13.80 5.41 41.87 3.41
5656 6704 4.083003 TGTCAAGGATTTGTTTGATACGCC 60.083 41.667 0.00 0.00 35.73 5.68
5897 6945 1.811359 ACCACCTCGAAGTAGAACTCG 59.189 52.381 0.00 0.00 0.00 4.18
5903 6951 2.296471 AGTGTCAACCACCTCGAAGTAG 59.704 50.000 0.00 0.00 45.74 2.57
5909 6957 0.880278 CACCAGTGTCAACCACCTCG 60.880 60.000 0.00 0.00 45.74 4.63
6057 7105 6.215121 TGCACTTGACAAGATTTTAACATGG 58.785 36.000 21.95 0.00 0.00 3.66
6108 7156 3.055167 CACACACATCCTACCCATGAAGA 60.055 47.826 0.00 0.00 0.00 2.87
6109 7157 3.273434 CACACACATCCTACCCATGAAG 58.727 50.000 0.00 0.00 0.00 3.02
6110 7158 2.642311 ACACACACATCCTACCCATGAA 59.358 45.455 0.00 0.00 0.00 2.57
6112 7160 2.290260 ACACACACACATCCTACCCATG 60.290 50.000 0.00 0.00 0.00 3.66
6113 7161 1.985159 ACACACACACATCCTACCCAT 59.015 47.619 0.00 0.00 0.00 4.00
6115 7163 2.423577 GAACACACACACATCCTACCC 58.576 52.381 0.00 0.00 0.00 3.69
6117 7165 2.475111 CACGAACACACACACATCCTAC 59.525 50.000 0.00 0.00 0.00 3.18
6119 7167 1.134521 ACACGAACACACACACATCCT 60.135 47.619 0.00 0.00 0.00 3.24
6125 7173 3.243101 ACAAACAAACACGAACACACACA 60.243 39.130 0.00 0.00 0.00 3.72
6126 7174 3.301706 ACAAACAAACACGAACACACAC 58.698 40.909 0.00 0.00 0.00 3.82
6127 7175 3.627732 ACAAACAAACACGAACACACA 57.372 38.095 0.00 0.00 0.00 3.72
6128 7176 4.375506 CCAAACAAACAAACACGAACACAC 60.376 41.667 0.00 0.00 0.00 3.82
6130 7178 3.982058 TCCAAACAAACAAACACGAACAC 59.018 39.130 0.00 0.00 0.00 3.32
6132 7180 5.577860 TTTCCAAACAAACAAACACGAAC 57.422 34.783 0.00 0.00 0.00 3.95
6134 7182 5.529791 TCTTTTCCAAACAAACAAACACGA 58.470 33.333 0.00 0.00 0.00 4.35
6135 7183 5.830900 TCTTTTCCAAACAAACAAACACG 57.169 34.783 0.00 0.00 0.00 4.49
6136 7184 9.457110 AATTTTCTTTTCCAAACAAACAAACAC 57.543 25.926 0.00 0.00 0.00 3.32
6262 7562 1.210478 GGCTCCTTGTCCTTGATGCTA 59.790 52.381 0.00 0.00 0.00 3.49
6337 7637 0.688087 GGTCCTCTTCCACCTCCGAT 60.688 60.000 0.00 0.00 0.00 4.18
6340 7640 4.899243 AGGTCCTCTTCCACCTCC 57.101 61.111 0.00 0.00 38.83 4.30
6604 7904 0.739462 TAATGTTGGAGTCGCCGCTG 60.739 55.000 0.00 0.00 40.66 5.18
6781 8081 2.391469 CTTGATCCTCGCCAAGCTG 58.609 57.895 0.00 0.00 34.20 4.24
7042 8342 1.803289 CGTGATCTCAGACGCCTCA 59.197 57.895 0.00 0.00 0.00 3.86
7148 8511 3.207669 CTCTCCAGCATTGGCCGC 61.208 66.667 0.00 0.00 44.63 6.53
7372 8735 2.289820 CTGGCAATCCATGAAGATGACG 59.710 50.000 0.00 0.00 42.51 4.35
7439 8804 9.388506 GATTAAATCATCTTCAGGAACAAGAGA 57.611 33.333 0.00 0.00 33.36 3.10
7443 8808 8.950210 GTCAGATTAAATCATCTTCAGGAACAA 58.050 33.333 0.00 0.00 30.50 2.83
7518 8883 3.527186 CGCCTCGTCGCATCATAC 58.473 61.111 0.00 0.00 0.00 2.39
7593 8958 3.154473 CCCTCCTCCGCGGAATGA 61.154 66.667 30.53 25.41 42.53 2.57
7659 9024 1.663695 CGATTGTCGGCTTGGGTATT 58.336 50.000 0.00 0.00 36.00 1.89
7703 9068 3.303132 CCGCGATCAGTTATTAACTTGGC 60.303 47.826 8.23 5.90 40.46 4.52
7747 9114 0.253044 ATCATGTGACCGGGGAACAG 59.747 55.000 6.32 2.00 0.00 3.16
7748 9115 0.251916 GATCATGTGACCGGGGAACA 59.748 55.000 6.32 7.57 0.00 3.18
7756 9123 8.944029 CCTATCTTGATATTTGATCATGTGACC 58.056 37.037 0.00 0.00 0.00 4.02
7771 9138 7.504926 AAAACCACCTACACCTATCTTGATA 57.495 36.000 0.00 0.00 0.00 2.15
7801 9170 1.202110 GGATGACAACTGCATTCGCTG 60.202 52.381 0.00 0.00 42.42 5.18
7815 9184 4.254492 GGGTTTTCAGTGACTAGGATGAC 58.746 47.826 0.00 0.00 0.00 3.06
7855 9225 2.910360 CCCCTGGTCGCATGATCA 59.090 61.111 0.00 0.00 33.18 2.92
7868 9238 3.926058 ACAAACTACGATAATGCCCCT 57.074 42.857 0.00 0.00 0.00 4.79
7929 9299 5.745227 TCTGGAAATAAACCTGACCTGATC 58.255 41.667 0.00 0.00 32.09 2.92
8049 9420 1.341187 ACCCAAACACAAACTCCGGAA 60.341 47.619 5.23 0.00 0.00 4.30
8050 9421 0.256464 ACCCAAACACAAACTCCGGA 59.744 50.000 2.93 2.93 0.00 5.14
8052 9423 1.333619 CAGACCCAAACACAAACTCCG 59.666 52.381 0.00 0.00 0.00 4.63
8054 9425 3.279434 AGACAGACCCAAACACAAACTC 58.721 45.455 0.00 0.00 0.00 3.01
8055 9426 3.366052 AGACAGACCCAAACACAAACT 57.634 42.857 0.00 0.00 0.00 2.66
8056 9427 3.003378 GCTAGACAGACCCAAACACAAAC 59.997 47.826 0.00 0.00 0.00 2.93
8057 9428 3.211045 GCTAGACAGACCCAAACACAAA 58.789 45.455 0.00 0.00 0.00 2.83
8058 9429 2.171659 TGCTAGACAGACCCAAACACAA 59.828 45.455 0.00 0.00 0.00 3.33
8059 9430 1.765904 TGCTAGACAGACCCAAACACA 59.234 47.619 0.00 0.00 0.00 3.72
8060 9431 2.143925 GTGCTAGACAGACCCAAACAC 58.856 52.381 0.00 0.00 0.00 3.32
8061 9432 1.765904 TGTGCTAGACAGACCCAAACA 59.234 47.619 0.00 0.00 0.00 2.83
8062 9433 2.143925 GTGTGCTAGACAGACCCAAAC 58.856 52.381 0.00 0.00 36.56 2.93
8063 9434 1.765904 TGTGTGCTAGACAGACCCAAA 59.234 47.619 10.44 0.00 41.82 3.28
8064 9435 1.419381 TGTGTGCTAGACAGACCCAA 58.581 50.000 10.44 0.00 41.82 4.12
8065 9436 1.550524 GATGTGTGCTAGACAGACCCA 59.449 52.381 10.44 1.09 41.82 4.51
8066 9437 1.827969 AGATGTGTGCTAGACAGACCC 59.172 52.381 10.44 4.81 41.82 4.46
8067 9438 3.948473 TCTAGATGTGTGCTAGACAGACC 59.052 47.826 10.44 0.00 41.82 3.85
8068 9439 5.518812 CATCTAGATGTGTGCTAGACAGAC 58.481 45.833 22.42 0.55 44.98 3.51
8069 9440 5.764487 CATCTAGATGTGTGCTAGACAGA 57.236 43.478 22.42 0.00 44.98 3.41
8098 9469 7.928706 GCTTATCAGGTTAGATGTGACATAACT 59.071 37.037 10.13 2.33 31.53 2.24
8099 9470 7.710907 TGCTTATCAGGTTAGATGTGACATAAC 59.289 37.037 0.00 0.00 0.00 1.89
8100 9471 7.710907 GTGCTTATCAGGTTAGATGTGACATAA 59.289 37.037 0.00 0.00 0.00 1.90
8101 9472 7.069950 AGTGCTTATCAGGTTAGATGTGACATA 59.930 37.037 0.00 0.00 0.00 2.29
8102 9473 6.051717 GTGCTTATCAGGTTAGATGTGACAT 58.948 40.000 0.00 0.00 0.00 3.06
8103 9474 5.187772 AGTGCTTATCAGGTTAGATGTGACA 59.812 40.000 0.00 0.00 0.00 3.58
8104 9475 5.665459 AGTGCTTATCAGGTTAGATGTGAC 58.335 41.667 0.00 0.00 0.00 3.67
8105 9476 5.939764 AGTGCTTATCAGGTTAGATGTGA 57.060 39.130 0.00 0.00 0.00 3.58
8106 9477 7.212976 ACATAGTGCTTATCAGGTTAGATGTG 58.787 38.462 0.00 0.00 0.00 3.21
8107 9478 7.366847 ACATAGTGCTTATCAGGTTAGATGT 57.633 36.000 0.00 0.00 0.00 3.06
8108 9479 8.554528 CAAACATAGTGCTTATCAGGTTAGATG 58.445 37.037 0.00 0.00 0.00 2.90
8109 9480 8.267894 ACAAACATAGTGCTTATCAGGTTAGAT 58.732 33.333 0.00 0.00 0.00 1.98
8110 9481 7.549134 CACAAACATAGTGCTTATCAGGTTAGA 59.451 37.037 0.00 0.00 0.00 2.10
8111 9482 7.201644 CCACAAACATAGTGCTTATCAGGTTAG 60.202 40.741 0.00 0.00 35.69 2.34
8112 9483 6.597672 CCACAAACATAGTGCTTATCAGGTTA 59.402 38.462 0.00 0.00 35.69 2.85
8113 9484 5.415701 CCACAAACATAGTGCTTATCAGGTT 59.584 40.000 0.00 0.00 35.69 3.50
8114 9485 4.943705 CCACAAACATAGTGCTTATCAGGT 59.056 41.667 0.00 0.00 35.69 4.00
8115 9486 4.943705 ACCACAAACATAGTGCTTATCAGG 59.056 41.667 0.00 0.00 35.69 3.86
8116 9487 5.877012 AGACCACAAACATAGTGCTTATCAG 59.123 40.000 0.00 0.00 35.69 2.90
8117 9488 5.804639 AGACCACAAACATAGTGCTTATCA 58.195 37.500 0.00 0.00 35.69 2.15
8118 9489 8.438676 AATAGACCACAAACATAGTGCTTATC 57.561 34.615 0.00 0.00 35.69 1.75
8119 9490 8.807948 AAATAGACCACAAACATAGTGCTTAT 57.192 30.769 0.00 0.00 35.69 1.73
8120 9491 8.630054 AAAATAGACCACAAACATAGTGCTTA 57.370 30.769 0.00 0.00 35.69 3.09
8121 9492 7.524717 AAAATAGACCACAAACATAGTGCTT 57.475 32.000 0.00 0.00 35.69 3.91
8122 9493 7.524717 AAAAATAGACCACAAACATAGTGCT 57.475 32.000 0.00 0.00 35.69 4.40
8167 9538 9.816354 AAAAATAACTACACAGCAACAAGAAAT 57.184 25.926 0.00 0.00 0.00 2.17
8169 9540 9.944663 CTAAAAATAACTACACAGCAACAAGAA 57.055 29.630 0.00 0.00 0.00 2.52
8170 9541 9.332502 TCTAAAAATAACTACACAGCAACAAGA 57.667 29.630 0.00 0.00 0.00 3.02
8171 9542 9.944663 TTCTAAAAATAACTACACAGCAACAAG 57.055 29.630 0.00 0.00 0.00 3.16
8172 9543 9.944663 CTTCTAAAAATAACTACACAGCAACAA 57.055 29.630 0.00 0.00 0.00 2.83
8173 9544 8.564574 CCTTCTAAAAATAACTACACAGCAACA 58.435 33.333 0.00 0.00 0.00 3.33
8174 9545 8.565416 ACCTTCTAAAAATAACTACACAGCAAC 58.435 33.333 0.00 0.00 0.00 4.17
8175 9546 8.685838 ACCTTCTAAAAATAACTACACAGCAA 57.314 30.769 0.00 0.00 0.00 3.91
8176 9547 8.685838 AACCTTCTAAAAATAACTACACAGCA 57.314 30.769 0.00 0.00 0.00 4.41
8188 9559 9.739276 TGATGTCACATCTAACCTTCTAAAAAT 57.261 29.630 18.72 0.00 0.00 1.82
8189 9560 8.999431 GTGATGTCACATCTAACCTTCTAAAAA 58.001 33.333 18.72 0.00 45.75 1.94
8190 9561 8.547967 GTGATGTCACATCTAACCTTCTAAAA 57.452 34.615 18.72 0.00 45.75 1.52
8223 9594 9.376075 ACAGTTTGTCTAATTCACATCTAGATG 57.624 33.333 27.63 27.63 44.15 2.90
8224 9595 9.950496 AACAGTTTGTCTAATTCACATCTAGAT 57.050 29.630 0.00 0.00 0.00 1.98
8225 9596 9.778741 AAACAGTTTGTCTAATTCACATCTAGA 57.221 29.630 0.00 0.00 0.00 2.43
8226 9597 9.817365 CAAACAGTTTGTCTAATTCACATCTAG 57.183 33.333 16.77 0.00 35.94 2.43
8242 9613 4.922692 TGCTCTGAAAACACAAACAGTTTG 59.077 37.500 22.26 22.26 45.95 2.93
8243 9614 5.132897 TGCTCTGAAAACACAAACAGTTT 57.867 34.783 0.00 0.00 40.66 2.66
8244 9615 4.782019 TGCTCTGAAAACACAAACAGTT 57.218 36.364 0.00 0.00 0.00 3.16
8245 9616 4.158394 ACATGCTCTGAAAACACAAACAGT 59.842 37.500 0.00 0.00 0.00 3.55
8246 9617 4.501559 CACATGCTCTGAAAACACAAACAG 59.498 41.667 0.00 0.00 0.00 3.16
8247 9618 4.157472 TCACATGCTCTGAAAACACAAACA 59.843 37.500 0.00 0.00 0.00 2.83
8305 9676 6.498651 AGGAATCTGTACTTTCTTTCTCCAGA 59.501 38.462 0.00 0.00 32.60 3.86
8307 9678 6.688073 AGGAATCTGTACTTTCTTTCTCCA 57.312 37.500 0.00 0.00 0.00 3.86
8337 9708 3.583086 GGTAGCTAGCCAGGGATTTCATA 59.417 47.826 12.13 0.00 0.00 2.15
8349 9720 8.048514 ACTACTAGATATACAAGGTAGCTAGCC 58.951 40.741 19.06 11.24 40.20 3.93
8360 9731 9.181061 TGCTTGTGTACACTACTAGATATACAA 57.819 33.333 25.60 6.99 0.00 2.41
8361 9732 8.741603 TGCTTGTGTACACTACTAGATATACA 57.258 34.615 25.60 8.62 0.00 2.29
8420 9791 1.748493 CACTGCAGACCTAGAGGAGAC 59.252 57.143 23.35 0.00 38.94 3.36
8436 9807 5.978814 ACTAGTATTTAGGCAAGTCCACTG 58.021 41.667 0.00 0.00 37.29 3.66
8455 9826 6.092807 TGCGTGCATATGAGAGATAGTACTAG 59.907 42.308 6.97 0.00 0.00 2.57
8458 9829 4.854291 GTGCGTGCATATGAGAGATAGTAC 59.146 45.833 6.97 0.00 0.00 2.73
8464 9838 0.823460 TGGTGCGTGCATATGAGAGA 59.177 50.000 6.97 0.00 0.00 3.10
8477 9851 0.744281 AACTTTTCCCACTTGGTGCG 59.256 50.000 0.00 0.00 34.77 5.34
8535 9909 3.401033 TCTGATTTCAACGCAGGAGAA 57.599 42.857 0.00 0.00 0.00 2.87
8553 9927 5.127194 GGTGTTTCTTCTGAACCCTTTTTCT 59.873 40.000 0.00 0.00 31.02 2.52
8559 9933 3.884037 ATGGTGTTTCTTCTGAACCCT 57.116 42.857 0.00 0.00 31.02 4.34
8570 9944 7.657336 TGTTCCTAGATTTTCAATGGTGTTTC 58.343 34.615 0.00 0.00 0.00 2.78
8573 9947 7.557719 CCTATGTTCCTAGATTTTCAATGGTGT 59.442 37.037 0.00 0.00 0.00 4.16
8580 9954 8.832735 AGTAAACCCTATGTTCCTAGATTTTCA 58.167 33.333 0.00 0.00 35.67 2.69
8581 9955 9.682465 AAGTAAACCCTATGTTCCTAGATTTTC 57.318 33.333 0.00 0.00 35.67 2.29
8585 9959 7.790314 AGCTAAGTAAACCCTATGTTCCTAGAT 59.210 37.037 0.00 0.00 35.67 1.98
8590 9964 5.522824 CGAAGCTAAGTAAACCCTATGTTCC 59.477 44.000 0.00 0.00 35.67 3.62
8600 9974 4.625742 TGCACTGATCGAAGCTAAGTAAAC 59.374 41.667 0.00 0.00 0.00 2.01
8603 9977 4.450082 TTGCACTGATCGAAGCTAAGTA 57.550 40.909 0.00 0.00 0.00 2.24
8605 9979 3.482598 CGTTTGCACTGATCGAAGCTAAG 60.483 47.826 0.00 0.00 0.00 2.18
8606 9980 2.411748 CGTTTGCACTGATCGAAGCTAA 59.588 45.455 0.00 1.44 0.00 3.09
8607 9981 1.992667 CGTTTGCACTGATCGAAGCTA 59.007 47.619 0.00 0.00 0.00 3.32
8609 9983 0.790207 TCGTTTGCACTGATCGAAGC 59.210 50.000 0.00 0.00 0.00 3.86
8610 9984 3.729526 AATCGTTTGCACTGATCGAAG 57.270 42.857 0.00 0.00 34.38 3.79
8611 9985 3.496507 TCAAATCGTTTGCACTGATCGAA 59.503 39.130 0.00 0.00 40.43 3.71
8612 9986 3.063485 TCAAATCGTTTGCACTGATCGA 58.937 40.909 0.00 0.00 40.43 3.59
8613 9987 3.454042 TCAAATCGTTTGCACTGATCG 57.546 42.857 0.00 0.00 40.43 3.69
8614 9988 4.618489 CCTTTCAAATCGTTTGCACTGATC 59.382 41.667 0.00 0.00 40.43 2.92
8615 9989 4.278170 TCCTTTCAAATCGTTTGCACTGAT 59.722 37.500 0.00 0.00 40.43 2.90
8616 9990 3.629855 TCCTTTCAAATCGTTTGCACTGA 59.370 39.130 0.00 0.00 40.43 3.41
8617 9991 3.963665 TCCTTTCAAATCGTTTGCACTG 58.036 40.909 0.00 0.00 40.43 3.66
8618 9992 4.647424 TTCCTTTCAAATCGTTTGCACT 57.353 36.364 0.00 0.00 40.43 4.40
8619 9993 5.905480 ATTTCCTTTCAAATCGTTTGCAC 57.095 34.783 0.00 0.00 40.43 4.57
8620 9994 6.090628 GCATATTTCCTTTCAAATCGTTTGCA 59.909 34.615 5.83 0.00 40.43 4.08
8621 9995 6.455513 GGCATATTTCCTTTCAAATCGTTTGC 60.456 38.462 5.83 0.00 40.43 3.68
8622 9996 6.813152 AGGCATATTTCCTTTCAAATCGTTTG 59.187 34.615 4.67 4.67 41.96 2.93
8623 9997 6.935167 AGGCATATTTCCTTTCAAATCGTTT 58.065 32.000 0.00 0.00 0.00 3.60
8632 10006 6.877611 TTTCGGATAGGCATATTTCCTTTC 57.122 37.500 0.00 1.80 35.21 2.62
8645 10019 8.345565 CCTCAAAATTTCACTATTTCGGATAGG 58.654 37.037 10.23 0.00 0.00 2.57
8648 10022 6.096846 CCCCTCAAAATTTCACTATTTCGGAT 59.903 38.462 0.00 0.00 0.00 4.18
8671 10045 2.039879 TGCTTGACTTTACTCTTCCCCC 59.960 50.000 0.00 0.00 0.00 5.40
8672 10046 3.418684 TGCTTGACTTTACTCTTCCCC 57.581 47.619 0.00 0.00 0.00 4.81
8673 10047 6.092807 CAGTTATGCTTGACTTTACTCTTCCC 59.907 42.308 0.00 0.00 0.00 3.97
8674 10048 6.874134 TCAGTTATGCTTGACTTTACTCTTCC 59.126 38.462 0.00 0.00 0.00 3.46
8675 10049 7.064016 CCTCAGTTATGCTTGACTTTACTCTTC 59.936 40.741 0.00 0.00 0.00 2.87
8676 10050 6.876257 CCTCAGTTATGCTTGACTTTACTCTT 59.124 38.462 0.00 0.00 0.00 2.85
8677 10051 6.014156 ACCTCAGTTATGCTTGACTTTACTCT 60.014 38.462 0.00 0.00 0.00 3.24
8678 10052 6.166982 ACCTCAGTTATGCTTGACTTTACTC 58.833 40.000 0.00 0.00 0.00 2.59
8679 10053 6.115448 ACCTCAGTTATGCTTGACTTTACT 57.885 37.500 0.00 0.00 0.00 2.24
8680 10054 6.651225 AGAACCTCAGTTATGCTTGACTTTAC 59.349 38.462 0.00 0.00 35.94 2.01
8681 10055 6.769512 AGAACCTCAGTTATGCTTGACTTTA 58.230 36.000 0.00 0.00 35.94 1.85
8682 10056 5.625150 AGAACCTCAGTTATGCTTGACTTT 58.375 37.500 0.00 0.00 35.94 2.66
8683 10057 5.234466 AGAACCTCAGTTATGCTTGACTT 57.766 39.130 0.00 0.00 35.94 3.01
8684 10058 4.899352 AGAACCTCAGTTATGCTTGACT 57.101 40.909 0.00 0.00 35.94 3.41
8685 10059 5.351740 GGTAAGAACCTCAGTTATGCTTGAC 59.648 44.000 0.00 0.00 43.08 3.18
8686 10060 5.012664 TGGTAAGAACCTCAGTTATGCTTGA 59.987 40.000 0.00 0.00 46.91 3.02
8687 10061 5.122396 GTGGTAAGAACCTCAGTTATGCTTG 59.878 44.000 0.00 0.00 46.91 4.01
8721 10095 6.294397 GCAACTTTGATGGTCTTCTCAATTCT 60.294 38.462 0.00 0.00 31.83 2.40
8793 10167 3.767711 TCCTGAGCAGACCGATATGTAT 58.232 45.455 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.