Multiple sequence alignment - TraesCS7A01G141200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G141200 chr7A 100.000 3711 0 0 1 3711 92842097 92838387 0.000000e+00 6854.0
1 TraesCS7A01G141200 chr7A 91.563 1695 109 17 908 2582 91684893 91686573 0.000000e+00 2307.0
2 TraesCS7A01G141200 chr7A 86.813 819 93 4 1088 1891 91724798 91725616 0.000000e+00 900.0
3 TraesCS7A01G141200 chr7A 86.837 471 35 10 2864 3320 91720551 91721008 5.530000e-138 501.0
4 TraesCS7A01G141200 chr7A 88.421 380 41 1 1887 2266 91741549 91741925 4.370000e-124 455.0
5 TraesCS7A01G141200 chr7A 74.836 1069 201 43 1221 2264 91633117 91634142 4.430000e-114 422.0
6 TraesCS7A01G141200 chr7A 90.650 246 14 6 2607 2847 91720324 91720565 5.980000e-83 318.0
7 TraesCS7A01G141200 chr7A 77.949 390 39 28 865 1225 91627482 91627853 2.260000e-47 200.0
8 TraesCS7A01G141200 chr7D 93.769 2327 97 21 896 3184 90748211 90745895 0.000000e+00 3450.0
9 TraesCS7A01G141200 chr7D 90.218 1881 125 27 908 2746 90508585 90510448 0.000000e+00 2399.0
10 TraesCS7A01G141200 chr7D 91.199 909 74 4 1 903 90763038 90762130 0.000000e+00 1230.0
11 TraesCS7A01G141200 chr7D 86.008 779 57 27 2105 2841 90541914 90542682 0.000000e+00 787.0
12 TraesCS7A01G141200 chr7D 76.253 1217 223 43 1074 2264 90257222 90258398 1.480000e-163 586.0
13 TraesCS7A01G141200 chr7D 88.759 427 28 6 3280 3703 90745696 90745287 4.280000e-139 505.0
14 TraesCS7A01G141200 chr7D 76.478 829 151 25 1074 1865 90522898 90522077 9.590000e-111 411.0
15 TraesCS7A01G141200 chr7D 90.909 44 4 0 237 280 55962996 55962953 4.000000e-05 60.2
16 TraesCS7A01G141200 chr7B 88.866 1913 136 45 896 2746 41297482 41299379 0.000000e+00 2281.0
17 TraesCS7A01G141200 chr7B 76.663 827 147 26 1074 1862 41309726 41310544 2.060000e-112 416.0
18 TraesCS7A01G141200 chr7B 76.382 597 117 16 1676 2264 41277770 41278350 2.170000e-77 300.0
19 TraesCS7A01G141200 chrUn 86.870 1211 132 12 1074 2266 103266662 103265461 0.000000e+00 1330.0
20 TraesCS7A01G141200 chrUn 83.562 511 59 11 1041 1536 312333789 312334289 4.370000e-124 455.0
21 TraesCS7A01G141200 chr6B 86.382 1241 140 13 1041 2266 52440718 52439492 0.000000e+00 1328.0
22 TraesCS7A01G141200 chr2B 82.963 675 73 13 2874 3519 364341336 364341997 4.160000e-159 571.0
23 TraesCS7A01G141200 chr2B 78.623 276 51 7 68 339 730688265 730688536 3.810000e-40 176.0
24 TraesCS7A01G141200 chr1A 89.694 359 36 1 2873 3230 45297923 45297565 1.210000e-124 457.0
25 TraesCS7A01G141200 chr5D 84.536 194 28 2 3519 3711 218580106 218579914 1.360000e-44 191.0
26 TraesCS7A01G141200 chr5D 97.436 39 1 0 670 708 542579630 542579592 2.390000e-07 67.6
27 TraesCS7A01G141200 chr4D 74.274 482 110 11 68 543 370363952 370364425 1.360000e-44 191.0
28 TraesCS7A01G141200 chr2A 87.417 151 15 2 3286 3435 753714489 753714342 1.770000e-38 171.0
29 TraesCS7A01G141200 chr6A 96.154 52 2 0 657 708 519299324 519299375 6.600000e-13 86.1
30 TraesCS7A01G141200 chr3D 82.653 98 13 4 3519 3614 45568247 45568342 2.380000e-12 84.2
31 TraesCS7A01G141200 chr5B 97.436 39 1 0 670 708 684226787 684226749 2.390000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G141200 chr7A 92838387 92842097 3710 True 6854.0 6854 100.000 1 3711 1 chr7A.!!$R1 3710
1 TraesCS7A01G141200 chr7A 91684893 91686573 1680 False 2307.0 2307 91.563 908 2582 1 chr7A.!!$F3 1674
2 TraesCS7A01G141200 chr7A 91720324 91725616 5292 False 573.0 900 88.100 1088 3320 3 chr7A.!!$F5 2232
3 TraesCS7A01G141200 chr7A 91633117 91634142 1025 False 422.0 422 74.836 1221 2264 1 chr7A.!!$F2 1043
4 TraesCS7A01G141200 chr7D 90508585 90510448 1863 False 2399.0 2399 90.218 908 2746 1 chr7D.!!$F2 1838
5 TraesCS7A01G141200 chr7D 90745287 90748211 2924 True 1977.5 3450 91.264 896 3703 2 chr7D.!!$R4 2807
6 TraesCS7A01G141200 chr7D 90762130 90763038 908 True 1230.0 1230 91.199 1 903 1 chr7D.!!$R3 902
7 TraesCS7A01G141200 chr7D 90541914 90542682 768 False 787.0 787 86.008 2105 2841 1 chr7D.!!$F3 736
8 TraesCS7A01G141200 chr7D 90257222 90258398 1176 False 586.0 586 76.253 1074 2264 1 chr7D.!!$F1 1190
9 TraesCS7A01G141200 chr7D 90522077 90522898 821 True 411.0 411 76.478 1074 1865 1 chr7D.!!$R2 791
10 TraesCS7A01G141200 chr7B 41297482 41299379 1897 False 2281.0 2281 88.866 896 2746 1 chr7B.!!$F2 1850
11 TraesCS7A01G141200 chr7B 41309726 41310544 818 False 416.0 416 76.663 1074 1862 1 chr7B.!!$F3 788
12 TraesCS7A01G141200 chr7B 41277770 41278350 580 False 300.0 300 76.382 1676 2264 1 chr7B.!!$F1 588
13 TraesCS7A01G141200 chrUn 103265461 103266662 1201 True 1330.0 1330 86.870 1074 2266 1 chrUn.!!$R1 1192
14 TraesCS7A01G141200 chrUn 312333789 312334289 500 False 455.0 455 83.562 1041 1536 1 chrUn.!!$F1 495
15 TraesCS7A01G141200 chr6B 52439492 52440718 1226 True 1328.0 1328 86.382 1041 2266 1 chr6B.!!$R1 1225
16 TraesCS7A01G141200 chr2B 364341336 364341997 661 False 571.0 571 82.963 2874 3519 1 chr2B.!!$F1 645


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
624 625 0.036765 GTCCATACTGTGCGGTCCAA 60.037 55.0 0.00 0.0 0.00 3.53 F
1025 1026 0.036010 ATAGGCACGGCATATCCAGC 60.036 55.0 0.00 0.0 29.19 4.85 F
1609 5200 0.179078 TTTACGACAGGGTGCACGTT 60.179 50.0 11.45 0.0 35.88 3.99 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1675 5275 0.729478 CGACGCTGATGACGTTGTCT 60.729 55.000 0.0 0.0 45.24 3.41 R
2456 6098 1.000385 CCACGTGACACATTTGGCAAT 60.000 47.619 19.3 0.0 44.76 3.56 R
3599 7437 0.178068 GCTCCTAGCCGTTGGAATCA 59.822 55.000 0.0 0.0 34.48 2.57 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 2.256591 GCTCATCCGCAATGCCGAT 61.257 57.895 3.30 3.30 35.17 4.18
64 65 6.128336 CGATGATCTATTTCTTTCATCTGCCC 60.128 42.308 9.35 0.00 41.37 5.36
77 78 3.781770 CTGCCCGTGATCTCGAGGC 62.782 68.421 27.93 27.93 42.72 4.70
130 131 1.131638 GCATAGGAGGTGGGATGTGA 58.868 55.000 0.00 0.00 0.00 3.58
162 163 7.012421 CCCGAGTCTAGCTTTTAAATAGCAAAT 59.988 37.037 18.33 7.86 41.11 2.32
209 210 2.623094 TAATGGTGGCCGGCAGATGG 62.623 60.000 30.85 0.00 0.00 3.51
267 268 0.604073 TTCCTCGACAACCGCACATA 59.396 50.000 0.00 0.00 38.37 2.29
291 292 1.059006 ATGGAGGGAGGCAGATGGAC 61.059 60.000 0.00 0.00 0.00 4.02
316 317 5.988561 GGGTATAGTTTGAATGCTGAGAGAG 59.011 44.000 0.00 0.00 0.00 3.20
317 318 5.988561 GGTATAGTTTGAATGCTGAGAGAGG 59.011 44.000 0.00 0.00 0.00 3.69
320 321 0.742281 TTGAATGCTGAGAGAGGCGC 60.742 55.000 0.00 0.00 0.00 6.53
323 324 3.713205 ATGCTGAGAGAGGCGCGTG 62.713 63.158 7.63 0.00 0.00 5.34
325 326 3.443925 CTGAGAGAGGCGCGTGGA 61.444 66.667 7.63 0.00 0.00 4.02
326 327 3.691744 CTGAGAGAGGCGCGTGGAC 62.692 68.421 7.63 0.00 0.00 4.02
328 329 3.691744 GAGAGAGGCGCGTGGACTG 62.692 68.421 7.63 0.00 29.96 3.51
356 357 4.477975 CGGACGGTGCTCTCGGAC 62.478 72.222 0.00 0.00 0.00 4.79
370 371 2.975799 GGACCCGCGTTGCTTCAA 60.976 61.111 4.92 0.00 0.00 2.69
371 372 2.251371 GACCCGCGTTGCTTCAAC 59.749 61.111 4.92 0.00 40.54 3.18
372 373 2.515057 ACCCGCGTTGCTTCAACA 60.515 55.556 4.92 0.00 43.70 3.33
373 374 2.051345 CCCGCGTTGCTTCAACAC 60.051 61.111 4.92 0.00 43.70 3.32
375 376 2.542907 CCGCGTTGCTTCAACACCT 61.543 57.895 4.92 0.00 43.70 4.00
376 377 1.369209 CGCGTTGCTTCAACACCTG 60.369 57.895 0.00 0.00 43.70 4.00
377 378 1.727467 GCGTTGCTTCAACACCTGT 59.273 52.632 9.90 0.00 43.70 4.00
378 379 0.100503 GCGTTGCTTCAACACCTGTT 59.899 50.000 9.90 0.00 43.70 3.16
379 380 1.859998 GCGTTGCTTCAACACCTGTTC 60.860 52.381 9.90 0.00 43.70 3.18
380 381 1.268539 CGTTGCTTCAACACCTGTTCC 60.269 52.381 9.90 0.00 43.70 3.62
382 383 2.136298 TGCTTCAACACCTGTTCCAA 57.864 45.000 0.00 0.00 35.83 3.53
383 384 2.665165 TGCTTCAACACCTGTTCCAAT 58.335 42.857 0.00 0.00 35.83 3.16
384 385 2.361757 TGCTTCAACACCTGTTCCAATG 59.638 45.455 0.00 0.00 35.83 2.82
385 386 2.622942 GCTTCAACACCTGTTCCAATGA 59.377 45.455 0.00 0.00 35.83 2.57
386 387 3.304928 GCTTCAACACCTGTTCCAATGAG 60.305 47.826 0.00 0.00 35.83 2.90
387 388 3.855255 TCAACACCTGTTCCAATGAGA 57.145 42.857 0.00 0.00 35.83 3.27
388 389 4.163441 TCAACACCTGTTCCAATGAGAA 57.837 40.909 0.00 0.00 35.83 2.87
391 392 3.897239 ACACCTGTTCCAATGAGAAACA 58.103 40.909 0.00 0.00 0.00 2.83
392 393 4.277476 ACACCTGTTCCAATGAGAAACAA 58.723 39.130 0.00 0.00 0.00 2.83
394 395 4.097741 CACCTGTTCCAATGAGAAACAACA 59.902 41.667 0.00 0.00 0.00 3.33
395 396 4.895297 ACCTGTTCCAATGAGAAACAACAT 59.105 37.500 0.00 0.00 0.00 2.71
396 397 5.010012 ACCTGTTCCAATGAGAAACAACATC 59.990 40.000 0.00 0.00 0.00 3.06
397 398 5.242393 CCTGTTCCAATGAGAAACAACATCT 59.758 40.000 0.00 0.00 0.00 2.90
398 399 6.075762 TGTTCCAATGAGAAACAACATCTG 57.924 37.500 0.00 0.00 0.00 2.90
402 403 5.302568 TCCAATGAGAAACAACATCTGCTTT 59.697 36.000 0.00 0.00 0.00 3.51
403 404 5.404366 CCAATGAGAAACAACATCTGCTTTG 59.596 40.000 0.00 0.00 0.00 2.77
404 405 4.572985 TGAGAAACAACATCTGCTTTGG 57.427 40.909 0.00 0.00 0.00 3.28
405 406 3.318839 TGAGAAACAACATCTGCTTTGGG 59.681 43.478 0.00 0.00 0.00 4.12
406 407 3.299503 AGAAACAACATCTGCTTTGGGT 58.700 40.909 0.00 0.00 0.00 4.51
407 408 3.319122 AGAAACAACATCTGCTTTGGGTC 59.681 43.478 0.00 0.00 0.00 4.46
408 409 1.238439 ACAACATCTGCTTTGGGTCG 58.762 50.000 0.00 0.00 0.00 4.79
409 410 0.523072 CAACATCTGCTTTGGGTCGG 59.477 55.000 0.00 0.00 0.00 4.79
410 411 1.244019 AACATCTGCTTTGGGTCGGC 61.244 55.000 0.00 0.00 0.00 5.54
412 413 1.033746 CATCTGCTTTGGGTCGGCAT 61.034 55.000 0.00 0.00 35.37 4.40
413 414 1.033746 ATCTGCTTTGGGTCGGCATG 61.034 55.000 0.00 0.00 35.37 4.06
414 415 1.675310 CTGCTTTGGGTCGGCATGA 60.675 57.895 0.00 0.00 35.37 3.07
415 416 1.228398 TGCTTTGGGTCGGCATGAA 60.228 52.632 0.00 0.00 0.00 2.57
416 417 0.611618 TGCTTTGGGTCGGCATGAAT 60.612 50.000 0.00 0.00 0.00 2.57
417 418 0.179129 GCTTTGGGTCGGCATGAATG 60.179 55.000 0.00 0.00 0.00 2.67
450 451 3.676093 GTTTTGGACGAGAAAGGGAGAT 58.324 45.455 0.00 0.00 0.00 2.75
452 453 4.737855 TTTGGACGAGAAAGGGAGATAG 57.262 45.455 0.00 0.00 0.00 2.08
453 454 3.383698 TGGACGAGAAAGGGAGATAGT 57.616 47.619 0.00 0.00 0.00 2.12
454 455 3.024547 TGGACGAGAAAGGGAGATAGTG 58.975 50.000 0.00 0.00 0.00 2.74
457 458 2.761208 ACGAGAAAGGGAGATAGTGTGG 59.239 50.000 0.00 0.00 0.00 4.17
458 459 2.101582 CGAGAAAGGGAGATAGTGTGGG 59.898 54.545 0.00 0.00 0.00 4.61
459 460 3.375699 GAGAAAGGGAGATAGTGTGGGA 58.624 50.000 0.00 0.00 0.00 4.37
460 461 3.379452 AGAAAGGGAGATAGTGTGGGAG 58.621 50.000 0.00 0.00 0.00 4.30
465 466 1.062810 GGAGATAGTGTGGGAGAGGGT 60.063 57.143 0.00 0.00 0.00 4.34
466 467 2.627217 GGAGATAGTGTGGGAGAGGGTT 60.627 54.545 0.00 0.00 0.00 4.11
469 470 1.938585 TAGTGTGGGAGAGGGTTCTG 58.061 55.000 0.00 0.00 32.53 3.02
470 471 0.104934 AGTGTGGGAGAGGGTTCTGT 60.105 55.000 0.00 0.00 32.53 3.41
472 473 1.127567 TGTGGGAGAGGGTTCTGTGG 61.128 60.000 0.00 0.00 32.53 4.17
473 474 1.538876 TGGGAGAGGGTTCTGTGGG 60.539 63.158 0.00 0.00 32.53 4.61
474 475 2.671682 GGAGAGGGTTCTGTGGGC 59.328 66.667 0.00 0.00 32.53 5.36
475 476 2.671682 GAGAGGGTTCTGTGGGCC 59.328 66.667 0.00 0.00 32.53 5.80
476 477 2.121963 AGAGGGTTCTGTGGGCCA 60.122 61.111 0.00 0.00 30.72 5.36
477 478 1.774217 AGAGGGTTCTGTGGGCCAA 60.774 57.895 8.40 0.00 30.72 4.52
479 480 2.283173 GGGTTCTGTGGGCCAAGG 60.283 66.667 8.40 3.88 0.00 3.61
480 481 2.520968 GGTTCTGTGGGCCAAGGT 59.479 61.111 8.40 0.00 0.00 3.50
481 482 1.152546 GGTTCTGTGGGCCAAGGTT 60.153 57.895 8.40 0.00 0.00 3.50
482 483 0.759060 GGTTCTGTGGGCCAAGGTTT 60.759 55.000 8.40 0.00 0.00 3.27
483 484 0.389025 GTTCTGTGGGCCAAGGTTTG 59.611 55.000 8.40 0.00 0.00 2.93
485 486 0.467290 TCTGTGGGCCAAGGTTTGTC 60.467 55.000 8.40 0.00 0.00 3.18
486 487 1.795170 CTGTGGGCCAAGGTTTGTCG 61.795 60.000 8.40 0.00 0.00 4.35
488 489 1.104577 GTGGGCCAAGGTTTGTCGAA 61.105 55.000 8.40 0.00 0.00 3.71
490 491 1.281656 GGCCAAGGTTTGTCGAACG 59.718 57.895 0.00 0.00 39.22 3.95
492 493 1.083015 CCAAGGTTTGTCGAACGCG 60.083 57.895 3.53 3.53 39.22 6.01
494 495 0.653323 CAAGGTTTGTCGAACGCGTG 60.653 55.000 14.98 0.00 39.22 5.34
496 497 2.785739 GTTTGTCGAACGCGTGCG 60.786 61.111 33.42 33.42 46.03 5.34
518 519 4.379243 AGCACTCCGGACGCCTTG 62.379 66.667 15.84 1.12 0.00 3.61
519 520 4.373116 GCACTCCGGACGCCTTGA 62.373 66.667 0.00 0.00 0.00 3.02
520 521 2.342279 CACTCCGGACGCCTTGAA 59.658 61.111 0.00 0.00 0.00 2.69
521 522 1.301401 CACTCCGGACGCCTTGAAA 60.301 57.895 0.00 0.00 0.00 2.69
522 523 1.004918 ACTCCGGACGCCTTGAAAG 60.005 57.895 0.00 0.00 0.00 2.62
523 524 2.358247 TCCGGACGCCTTGAAAGC 60.358 61.111 0.00 0.00 0.00 3.51
526 527 2.034221 GGACGCCTTGAAAGCCCT 59.966 61.111 0.00 0.00 0.00 5.19
528 529 2.034221 ACGCCTTGAAAGCCCTCC 59.966 61.111 0.00 0.00 0.00 4.30
529 530 2.034066 CGCCTTGAAAGCCCTCCA 59.966 61.111 0.00 0.00 0.00 3.86
531 532 1.379642 CGCCTTGAAAGCCCTCCATC 61.380 60.000 0.00 0.00 0.00 3.51
532 533 1.039785 GCCTTGAAAGCCCTCCATCC 61.040 60.000 0.00 0.00 0.00 3.51
533 534 0.396278 CCTTGAAAGCCCTCCATCCC 60.396 60.000 0.00 0.00 0.00 3.85
535 536 0.625849 TTGAAAGCCCTCCATCCCTC 59.374 55.000 0.00 0.00 0.00 4.30
536 537 0.549902 TGAAAGCCCTCCATCCCTCA 60.550 55.000 0.00 0.00 0.00 3.86
539 540 0.551131 AAGCCCTCCATCCCTCAGTT 60.551 55.000 0.00 0.00 0.00 3.16
541 542 0.394899 GCCCTCCATCCCTCAGTTTG 60.395 60.000 0.00 0.00 0.00 2.93
543 544 0.745845 CCTCCATCCCTCAGTTTGCG 60.746 60.000 0.00 0.00 0.00 4.85
544 545 0.250234 CTCCATCCCTCAGTTTGCGA 59.750 55.000 0.00 0.00 0.00 5.10
545 546 0.690192 TCCATCCCTCAGTTTGCGAA 59.310 50.000 0.00 0.00 0.00 4.70
546 547 1.073125 TCCATCCCTCAGTTTGCGAAA 59.927 47.619 0.00 0.00 0.00 3.46
563 564 3.300711 AAAAAGGACGTCCAGACCG 57.699 52.632 35.00 0.00 39.69 4.79
564 565 0.250166 AAAAAGGACGTCCAGACCGG 60.250 55.000 35.00 0.00 39.69 5.28
565 566 1.405272 AAAAGGACGTCCAGACCGGT 61.405 55.000 35.00 6.92 39.69 5.28
566 567 1.813728 AAAGGACGTCCAGACCGGTC 61.814 60.000 35.00 27.67 39.69 4.79
567 568 3.756727 GGACGTCCAGACCGGTCC 61.757 72.222 30.82 14.51 35.57 4.46
569 570 4.962836 ACGTCCAGACCGGTCCGT 62.963 66.667 30.82 27.44 38.18 4.69
570 571 2.747460 CGTCCAGACCGGTCCGTA 60.747 66.667 30.82 13.49 35.57 4.02
571 572 2.758089 CGTCCAGACCGGTCCGTAG 61.758 68.421 30.82 17.58 35.57 3.51
572 573 1.377725 GTCCAGACCGGTCCGTAGA 60.378 63.158 30.82 18.69 35.57 2.59
573 574 1.377725 TCCAGACCGGTCCGTAGAC 60.378 63.158 30.82 4.86 42.73 2.59
574 575 2.758089 CCAGACCGGTCCGTAGACG 61.758 68.421 30.82 10.46 44.54 4.18
575 576 1.742880 CAGACCGGTCCGTAGACGA 60.743 63.158 30.82 0.00 44.54 4.20
576 577 1.003355 AGACCGGTCCGTAGACGAA 60.003 57.895 30.82 0.00 44.54 3.85
577 578 0.393537 AGACCGGTCCGTAGACGAAT 60.394 55.000 30.82 5.32 44.54 3.34
578 579 0.248377 GACCGGTCCGTAGACGAATG 60.248 60.000 24.75 0.00 44.54 2.67
579 580 1.588139 CCGGTCCGTAGACGAATGC 60.588 63.158 11.06 0.00 44.54 3.56
582 583 1.138247 GTCCGTAGACGAATGCGGT 59.862 57.895 17.09 0.00 46.97 5.68
583 584 0.378257 GTCCGTAGACGAATGCGGTA 59.622 55.000 17.09 5.55 46.97 4.02
584 585 0.378257 TCCGTAGACGAATGCGGTAC 59.622 55.000 17.09 0.00 46.97 3.34
585 586 0.379669 CCGTAGACGAATGCGGTACT 59.620 55.000 3.07 0.00 42.68 2.73
587 588 1.202110 CGTAGACGAATGCGGTACTGT 60.202 52.381 3.10 0.00 43.17 3.55
588 589 2.182825 GTAGACGAATGCGGTACTGTG 58.817 52.381 3.10 0.00 43.17 3.66
590 591 1.000506 AGACGAATGCGGTACTGTGTT 59.999 47.619 3.10 0.00 43.17 3.32
591 592 1.126113 GACGAATGCGGTACTGTGTTG 59.874 52.381 3.10 0.00 43.17 3.33
592 593 0.442310 CGAATGCGGTACTGTGTTGG 59.558 55.000 3.10 0.00 0.00 3.77
593 594 1.803334 GAATGCGGTACTGTGTTGGA 58.197 50.000 3.10 0.00 0.00 3.53
596 597 0.321210 TGCGGTACTGTGTTGGATGG 60.321 55.000 3.10 0.00 0.00 3.51
597 598 1.644786 GCGGTACTGTGTTGGATGGC 61.645 60.000 3.10 0.00 0.00 4.40
598 599 0.321210 CGGTACTGTGTTGGATGGCA 60.321 55.000 0.00 0.00 0.00 4.92
599 600 1.880221 CGGTACTGTGTTGGATGGCAA 60.880 52.381 0.00 0.00 0.00 4.52
600 601 2.235016 GGTACTGTGTTGGATGGCAAA 58.765 47.619 0.00 0.00 0.00 3.68
602 603 2.888834 ACTGTGTTGGATGGCAAAAC 57.111 45.000 0.00 0.00 0.00 2.43
603 604 2.106566 ACTGTGTTGGATGGCAAAACA 58.893 42.857 9.00 9.00 0.00 2.83
605 606 1.486439 GTGTTGGATGGCAAAACACG 58.514 50.000 20.88 0.00 42.84 4.49
607 608 1.066303 TGTTGGATGGCAAAACACGTC 59.934 47.619 9.00 0.00 0.00 4.34
608 609 0.671251 TTGGATGGCAAAACACGTCC 59.329 50.000 0.00 0.00 42.00 4.79
610 611 0.887933 GGATGGCAAAACACGTCCAT 59.112 50.000 4.01 4.01 41.43 3.41
611 612 2.088423 GGATGGCAAAACACGTCCATA 58.912 47.619 4.34 0.00 41.43 2.74
612 613 2.159435 GGATGGCAAAACACGTCCATAC 60.159 50.000 4.34 1.49 41.43 2.39
613 614 2.264005 TGGCAAAACACGTCCATACT 57.736 45.000 0.00 0.00 0.00 2.12
614 615 1.876799 TGGCAAAACACGTCCATACTG 59.123 47.619 0.00 0.00 0.00 2.74
618 619 1.144969 AAACACGTCCATACTGTGCG 58.855 50.000 0.00 0.00 35.15 5.34
619 620 0.669318 AACACGTCCATACTGTGCGG 60.669 55.000 0.00 0.00 35.15 5.69
620 621 1.080093 CACGTCCATACTGTGCGGT 60.080 57.895 0.00 0.00 0.00 5.68
621 622 1.076533 CACGTCCATACTGTGCGGTC 61.077 60.000 0.00 0.00 0.00 4.79
622 623 1.518572 CGTCCATACTGTGCGGTCC 60.519 63.158 0.00 0.00 0.00 4.46
623 624 1.594833 GTCCATACTGTGCGGTCCA 59.405 57.895 0.00 0.00 0.00 4.02
624 625 0.036765 GTCCATACTGTGCGGTCCAA 60.037 55.000 0.00 0.00 0.00 3.53
627 628 0.442310 CATACTGTGCGGTCCAAACG 59.558 55.000 0.00 0.00 0.00 3.60
629 630 1.746322 TACTGTGCGGTCCAAACGGA 61.746 55.000 6.74 0.00 0.00 4.69
630 631 1.671054 CTGTGCGGTCCAAACGGAT 60.671 57.895 0.00 0.00 34.24 4.18
632 633 3.053291 TGCGGTCCAAACGGATGC 61.053 61.111 0.00 0.00 37.33 3.91
634 635 1.448893 GCGGTCCAAACGGATGCTA 60.449 57.895 0.00 0.00 35.20 3.49
635 636 1.429148 GCGGTCCAAACGGATGCTAG 61.429 60.000 0.00 0.00 35.20 3.42
637 638 1.369625 GGTCCAAACGGATGCTAGTG 58.630 55.000 0.00 0.00 34.24 2.74
638 639 1.369625 GTCCAAACGGATGCTAGTGG 58.630 55.000 0.00 0.00 34.24 4.00
639 640 0.981183 TCCAAACGGATGCTAGTGGT 59.019 50.000 0.00 0.00 0.00 4.16
640 641 1.349688 TCCAAACGGATGCTAGTGGTT 59.650 47.619 0.00 0.00 0.00 3.67
641 642 1.737793 CCAAACGGATGCTAGTGGTTC 59.262 52.381 0.00 0.00 0.00 3.62
643 644 0.108329 AACGGATGCTAGTGGTTCGG 60.108 55.000 0.00 0.00 0.00 4.30
644 645 1.227263 CGGATGCTAGTGGTTCGGG 60.227 63.158 0.00 0.00 0.00 5.14
645 646 1.905512 GGATGCTAGTGGTTCGGGT 59.094 57.895 0.00 0.00 0.00 5.28
646 647 0.462047 GGATGCTAGTGGTTCGGGTG 60.462 60.000 0.00 0.00 0.00 4.61
647 648 0.249398 GATGCTAGTGGTTCGGGTGT 59.751 55.000 0.00 0.00 0.00 4.16
649 650 1.370064 GCTAGTGGTTCGGGTGTGT 59.630 57.895 0.00 0.00 0.00 3.72
652 653 0.759812 TAGTGGTTCGGGTGTGTCCA 60.760 55.000 0.00 0.00 38.11 4.02
653 654 1.153127 GTGGTTCGGGTGTGTCCAA 60.153 57.895 0.00 0.00 38.11 3.53
654 655 0.748729 GTGGTTCGGGTGTGTCCAAA 60.749 55.000 0.00 0.00 38.11 3.28
656 657 0.596082 GGTTCGGGTGTGTCCAAATG 59.404 55.000 0.00 0.00 38.11 2.32
657 658 0.039527 GTTCGGGTGTGTCCAAATGC 60.040 55.000 0.00 0.00 38.11 3.56
658 659 0.466372 TTCGGGTGTGTCCAAATGCA 60.466 50.000 0.00 0.00 38.11 3.96
659 660 0.251121 TCGGGTGTGTCCAAATGCAT 60.251 50.000 0.00 0.00 38.11 3.96
662 663 0.171007 GGTGTGTCCAAATGCATCCG 59.829 55.000 0.00 0.00 35.97 4.18
663 664 0.881118 GTGTGTCCAAATGCATCCGT 59.119 50.000 0.00 0.00 0.00 4.69
664 665 0.880441 TGTGTCCAAATGCATCCGTG 59.120 50.000 0.00 0.00 0.00 4.94
666 667 1.131126 GTGTCCAAATGCATCCGTGAG 59.869 52.381 0.00 0.00 0.00 3.51
667 668 0.099436 GTCCAAATGCATCCGTGAGC 59.901 55.000 0.00 0.00 0.00 4.26
668 669 0.322366 TCCAAATGCATCCGTGAGCA 60.322 50.000 0.00 0.00 45.92 4.26
673 674 3.246403 TGCATCCGTGAGCATTTGA 57.754 47.368 0.00 0.00 35.51 2.69
674 675 1.089112 TGCATCCGTGAGCATTTGAG 58.911 50.000 0.00 0.00 35.51 3.02
675 676 0.379669 GCATCCGTGAGCATTTGAGG 59.620 55.000 0.00 0.00 0.00 3.86
676 677 1.019673 CATCCGTGAGCATTTGAGGG 58.980 55.000 0.00 0.00 0.00 4.30
677 678 0.107017 ATCCGTGAGCATTTGAGGGG 60.107 55.000 0.00 0.00 0.00 4.79
678 679 2.409870 CCGTGAGCATTTGAGGGGC 61.410 63.158 0.00 0.00 0.00 5.80
679 680 2.409870 CGTGAGCATTTGAGGGGCC 61.410 63.158 0.00 0.00 0.00 5.80
680 681 2.045045 TGAGCATTTGAGGGGCCG 60.045 61.111 0.00 0.00 0.00 6.13
681 682 2.830370 GAGCATTTGAGGGGCCGG 60.830 66.667 0.00 0.00 0.00 6.13
682 683 3.338250 AGCATTTGAGGGGCCGGA 61.338 61.111 5.05 0.00 0.00 5.14
683 684 2.123726 GCATTTGAGGGGCCGGAT 60.124 61.111 5.05 0.00 0.00 4.18
684 685 1.758122 GCATTTGAGGGGCCGGATT 60.758 57.895 5.05 0.00 0.00 3.01
685 686 1.329913 GCATTTGAGGGGCCGGATTT 61.330 55.000 5.05 0.00 0.00 2.17
686 687 0.461135 CATTTGAGGGGCCGGATTTG 59.539 55.000 5.05 0.00 0.00 2.32
687 688 1.329913 ATTTGAGGGGCCGGATTTGC 61.330 55.000 5.05 0.00 0.00 3.68
694 695 2.807622 GCCGGATTTGCCATGTCC 59.192 61.111 5.05 0.00 35.94 4.02
695 696 2.051518 GCCGGATTTGCCATGTCCA 61.052 57.895 5.05 0.00 35.94 4.02
696 697 2.008268 GCCGGATTTGCCATGTCCAG 62.008 60.000 5.05 0.00 35.94 3.86
697 698 0.680921 CCGGATTTGCCATGTCCAGT 60.681 55.000 0.00 0.00 35.94 4.00
698 699 1.176527 CGGATTTGCCATGTCCAGTT 58.823 50.000 0.76 0.00 35.94 3.16
699 700 1.135315 CGGATTTGCCATGTCCAGTTG 60.135 52.381 0.76 0.00 35.94 3.16
704 705 3.719268 TTGCCATGTCCAGTTGTAGAT 57.281 42.857 0.00 0.00 0.00 1.98
705 706 2.989909 TGCCATGTCCAGTTGTAGATG 58.010 47.619 0.00 0.00 0.00 2.90
707 708 2.681976 GCCATGTCCAGTTGTAGATGCT 60.682 50.000 0.00 0.00 0.00 3.79
709 710 4.744867 GCCATGTCCAGTTGTAGATGCTAT 60.745 45.833 0.00 0.00 0.00 2.97
710 711 5.511373 GCCATGTCCAGTTGTAGATGCTATA 60.511 44.000 0.00 0.00 0.00 1.31
711 712 6.524734 CCATGTCCAGTTGTAGATGCTATAA 58.475 40.000 0.00 0.00 0.00 0.98
713 714 6.538945 TGTCCAGTTGTAGATGCTATAACA 57.461 37.500 13.88 0.00 0.00 2.41
716 717 5.423931 TCCAGTTGTAGATGCTATAACACCA 59.576 40.000 13.88 0.00 0.00 4.17
717 718 5.523916 CCAGTTGTAGATGCTATAACACCAC 59.476 44.000 13.88 0.00 0.00 4.16
718 719 6.341316 CAGTTGTAGATGCTATAACACCACT 58.659 40.000 13.88 0.00 0.00 4.00
721 722 8.361139 AGTTGTAGATGCTATAACACCACTATC 58.639 37.037 13.88 0.00 0.00 2.08
722 723 7.228314 TGTAGATGCTATAACACCACTATCC 57.772 40.000 0.00 0.00 0.00 2.59
723 724 7.010771 TGTAGATGCTATAACACCACTATCCT 58.989 38.462 0.00 0.00 0.00 3.24
724 725 8.168058 TGTAGATGCTATAACACCACTATCCTA 58.832 37.037 0.00 0.00 0.00 2.94
725 726 7.710676 AGATGCTATAACACCACTATCCTAG 57.289 40.000 0.00 0.00 0.00 3.02
726 727 6.665680 AGATGCTATAACACCACTATCCTAGG 59.334 42.308 0.82 0.82 0.00 3.02
727 728 5.960704 TGCTATAACACCACTATCCTAGGA 58.039 41.667 15.46 15.46 0.00 2.94
729 730 6.267014 TGCTATAACACCACTATCCTAGGAAC 59.733 42.308 17.30 0.00 0.00 3.62
732 733 9.529823 CTATAACACCACTATCCTAGGAACATA 57.470 37.037 17.30 2.74 0.00 2.29
734 735 5.778542 ACACCACTATCCTAGGAACATACT 58.221 41.667 17.30 0.00 0.00 2.12
735 736 6.919158 ACACCACTATCCTAGGAACATACTA 58.081 40.000 17.30 1.13 0.00 1.82
736 737 7.536625 ACACCACTATCCTAGGAACATACTAT 58.463 38.462 17.30 0.00 0.00 2.12
737 738 8.676020 ACACCACTATCCTAGGAACATACTATA 58.324 37.037 17.30 0.00 0.00 1.31
742 743 9.629878 ACTATCCTAGGAACATACTATAATCCG 57.370 37.037 17.30 0.00 35.31 4.18
743 744 9.848710 CTATCCTAGGAACATACTATAATCCGA 57.151 37.037 17.30 0.00 35.31 4.55
744 745 8.754991 ATCCTAGGAACATACTATAATCCGAG 57.245 38.462 17.30 0.00 35.31 4.63
745 746 6.602406 TCCTAGGAACATACTATAATCCGAGC 59.398 42.308 9.71 0.00 33.23 5.03
746 747 6.603997 CCTAGGAACATACTATAATCCGAGCT 59.396 42.308 1.05 0.00 33.23 4.09
747 748 6.518208 AGGAACATACTATAATCCGAGCTC 57.482 41.667 2.73 2.73 35.31 4.09
748 749 5.419471 AGGAACATACTATAATCCGAGCTCC 59.581 44.000 8.47 0.00 35.31 4.70
749 750 5.185249 GGAACATACTATAATCCGAGCTCCA 59.815 44.000 8.47 0.00 0.00 3.86
750 751 5.646577 ACATACTATAATCCGAGCTCCAC 57.353 43.478 8.47 0.00 0.00 4.02
751 752 5.077564 ACATACTATAATCCGAGCTCCACA 58.922 41.667 8.47 0.00 0.00 4.17
753 754 4.527509 ACTATAATCCGAGCTCCACATG 57.472 45.455 8.47 0.00 0.00 3.21
754 755 3.898123 ACTATAATCCGAGCTCCACATGT 59.102 43.478 8.47 0.00 0.00 3.21
755 756 5.077564 ACTATAATCCGAGCTCCACATGTA 58.922 41.667 8.47 0.00 0.00 2.29
756 757 2.898729 AATCCGAGCTCCACATGTAG 57.101 50.000 8.47 0.00 0.00 2.74
758 759 0.970427 TCCGAGCTCCACATGTAGCA 60.970 55.000 20.05 0.00 41.32 3.49
759 760 0.108186 CCGAGCTCCACATGTAGCAA 60.108 55.000 20.05 0.00 41.32 3.91
760 761 1.284657 CGAGCTCCACATGTAGCAAG 58.715 55.000 20.05 10.89 41.32 4.01
761 762 1.404717 CGAGCTCCACATGTAGCAAGT 60.405 52.381 20.05 2.50 41.32 3.16
762 763 2.159240 CGAGCTCCACATGTAGCAAGTA 60.159 50.000 20.05 0.00 41.32 2.24
763 764 3.491619 CGAGCTCCACATGTAGCAAGTAT 60.492 47.826 20.05 1.83 41.32 2.12
764 765 4.054671 GAGCTCCACATGTAGCAAGTATC 58.945 47.826 20.05 7.10 41.32 2.24
765 766 3.452264 AGCTCCACATGTAGCAAGTATCA 59.548 43.478 20.05 0.00 41.32 2.15
766 767 3.557595 GCTCCACATGTAGCAAGTATCAC 59.442 47.826 14.45 0.00 38.63 3.06
767 768 4.758688 CTCCACATGTAGCAAGTATCACA 58.241 43.478 0.00 0.00 0.00 3.58
768 769 4.503910 TCCACATGTAGCAAGTATCACAC 58.496 43.478 0.00 0.00 0.00 3.82
769 770 4.020662 TCCACATGTAGCAAGTATCACACA 60.021 41.667 0.00 0.00 0.00 3.72
773 774 7.065683 CCACATGTAGCAAGTATCACACAAATA 59.934 37.037 0.00 0.00 0.00 1.40
775 776 9.830975 ACATGTAGCAAGTATCACACAAATATA 57.169 29.630 0.00 0.00 0.00 0.86
777 778 9.830975 ATGTAGCAAGTATCACACAAATATACA 57.169 29.630 0.00 0.00 0.00 2.29
778 779 9.660180 TGTAGCAAGTATCACACAAATATACAA 57.340 29.630 0.00 0.00 0.00 2.41
780 781 8.560355 AGCAAGTATCACACAAATATACAACA 57.440 30.769 0.00 0.00 0.00 3.33
781 782 9.177608 AGCAAGTATCACACAAATATACAACAT 57.822 29.630 0.00 0.00 0.00 2.71
788 789 8.741101 TCACACAAATATACAACATTTTCTGC 57.259 30.769 0.00 0.00 0.00 4.26
789 790 8.355913 TCACACAAATATACAACATTTTCTGCA 58.644 29.630 0.00 0.00 0.00 4.41
790 791 9.142515 CACACAAATATACAACATTTTCTGCAT 57.857 29.630 0.00 0.00 0.00 3.96
791 792 9.357652 ACACAAATATACAACATTTTCTGCATC 57.642 29.630 0.00 0.00 0.00 3.91
792 793 9.577110 CACAAATATACAACATTTTCTGCATCT 57.423 29.630 0.00 0.00 0.00 2.90
801 802 9.846248 ACAACATTTTCTGCATCTTAATTCTAC 57.154 29.630 0.00 0.00 0.00 2.59
807 808 8.806429 TTTCTGCATCTTAATTCTACATCCAA 57.194 30.769 0.00 0.00 0.00 3.53
808 809 8.806429 TTCTGCATCTTAATTCTACATCCAAA 57.194 30.769 0.00 0.00 0.00 3.28
810 811 9.412460 TCTGCATCTTAATTCTACATCCAAATT 57.588 29.630 0.00 0.00 0.00 1.82
853 854 6.890663 TTTTTAACTCCGTACGTATCCATG 57.109 37.500 15.21 0.00 0.00 3.66
854 855 4.572985 TTAACTCCGTACGTATCCATGG 57.427 45.455 15.21 4.97 0.00 3.66
855 856 2.062971 ACTCCGTACGTATCCATGGT 57.937 50.000 15.21 1.59 0.00 3.55
856 857 2.381911 ACTCCGTACGTATCCATGGTT 58.618 47.619 15.21 6.02 0.00 3.67
857 858 3.554934 ACTCCGTACGTATCCATGGTTA 58.445 45.455 15.21 4.84 0.00 2.85
863 864 1.214367 CGTATCCATGGTTACGTGCC 58.786 55.000 33.04 10.85 38.34 5.01
864 865 1.214367 GTATCCATGGTTACGTGCCG 58.786 55.000 15.53 0.00 32.11 5.69
865 866 0.825410 TATCCATGGTTACGTGCCGT 59.175 50.000 12.58 0.00 44.35 5.68
866 867 0.742990 ATCCATGGTTACGTGCCGTG 60.743 55.000 19.94 19.94 41.39 4.94
867 868 2.478746 CATGGTTACGTGCCGTGC 59.521 61.111 16.61 3.81 41.39 5.34
868 869 2.032634 CATGGTTACGTGCCGTGCT 61.033 57.895 16.61 0.00 41.39 4.40
870 871 2.048503 GGTTACGTGCCGTGCTCT 60.049 61.111 10.01 0.00 41.39 4.09
872 873 0.179119 GGTTACGTGCCGTGCTCTAT 60.179 55.000 10.01 0.00 41.39 1.98
873 874 1.197910 GTTACGTGCCGTGCTCTATC 58.802 55.000 10.01 0.00 41.39 2.08
875 876 2.055310 TACGTGCCGTGCTCTATCCG 62.055 60.000 10.01 0.00 41.39 4.18
876 877 2.805546 GTGCCGTGCTCTATCCGA 59.194 61.111 0.00 0.00 0.00 4.55
877 878 1.141019 GTGCCGTGCTCTATCCGAA 59.859 57.895 0.00 0.00 0.00 4.30
878 879 0.459585 GTGCCGTGCTCTATCCGAAA 60.460 55.000 0.00 0.00 0.00 3.46
880 881 1.140816 GCCGTGCTCTATCCGAAATC 58.859 55.000 0.00 0.00 0.00 2.17
881 882 1.538204 GCCGTGCTCTATCCGAAATCA 60.538 52.381 0.00 0.00 0.00 2.57
883 884 2.481276 CCGTGCTCTATCCGAAATCACA 60.481 50.000 0.00 0.00 0.00 3.58
884 885 3.186909 CGTGCTCTATCCGAAATCACAA 58.813 45.455 0.00 0.00 0.00 3.33
885 886 3.000322 CGTGCTCTATCCGAAATCACAAC 60.000 47.826 0.00 0.00 0.00 3.32
886 887 3.932710 GTGCTCTATCCGAAATCACAACA 59.067 43.478 0.00 0.00 0.00 3.33
887 888 4.391830 GTGCTCTATCCGAAATCACAACAA 59.608 41.667 0.00 0.00 0.00 2.83
889 890 4.494855 GCTCTATCCGAAATCACAACAAGC 60.495 45.833 0.00 0.00 0.00 4.01
890 891 4.832248 TCTATCCGAAATCACAACAAGCT 58.168 39.130 0.00 0.00 0.00 3.74
892 893 3.126001 TCCGAAATCACAACAAGCTCT 57.874 42.857 0.00 0.00 0.00 4.09
893 894 3.067106 TCCGAAATCACAACAAGCTCTC 58.933 45.455 0.00 0.00 0.00 3.20
894 895 3.070018 CCGAAATCACAACAAGCTCTCT 58.930 45.455 0.00 0.00 0.00 3.10
984 985 3.324846 ACCAGCAAGTATCTGTGTCTGAA 59.675 43.478 0.00 0.00 0.00 3.02
1022 1023 5.057149 CCTATAAATAGGCACGGCATATCC 58.943 45.833 3.12 0.00 43.08 2.59
1023 1024 2.949177 AAATAGGCACGGCATATCCA 57.051 45.000 4.04 0.00 34.37 3.41
1025 1026 0.036010 ATAGGCACGGCATATCCAGC 60.036 55.000 0.00 0.00 29.19 4.85
1609 5200 0.179078 TTTACGACAGGGTGCACGTT 60.179 50.000 11.45 0.00 35.88 3.99
1615 5206 2.690786 GACAGGGTGCACGTTATTACA 58.309 47.619 11.45 0.00 0.00 2.41
1949 5582 3.382803 ATCAGGTGGAGCTGCTCGC 62.383 63.158 22.25 16.89 39.57 5.03
2267 5900 2.654877 CGTTGAGTGCCTACGGGT 59.345 61.111 0.00 0.00 39.66 5.28
2296 5929 6.299922 TGTGTCACCATTTCCACTTTACATA 58.700 36.000 0.00 0.00 0.00 2.29
2348 5985 0.816018 TCTTCCAACAAAGCGCGGAA 60.816 50.000 8.83 11.04 36.17 4.30
2392 6029 2.669569 CACCACCTCGCCCTTGTG 60.670 66.667 0.00 0.00 0.00 3.33
2544 6216 9.625747 TCATGCCATATGTTAGATTTTTCAGTA 57.374 29.630 1.24 0.00 0.00 2.74
2794 6498 3.627395 ACAAACCAGTCACAACTCTCA 57.373 42.857 0.00 0.00 31.71 3.27
2799 6503 4.630644 ACCAGTCACAACTCTCATCATT 57.369 40.909 0.00 0.00 31.71 2.57
2800 6504 5.745312 ACCAGTCACAACTCTCATCATTA 57.255 39.130 0.00 0.00 31.71 1.90
2836 6540 7.962964 AAACATAAAGTCAGATCGAAAGACA 57.037 32.000 14.87 0.00 46.97 3.41
2839 6543 6.369065 ACATAAAGTCAGATCGAAAGACAACC 59.631 38.462 14.87 0.00 46.97 3.77
2925 6630 7.765695 AAAATCAATATGGCGAGGAATACAT 57.234 32.000 0.00 0.00 0.00 2.29
3150 6855 0.683973 CTCCCAGACACTCTGTTGCT 59.316 55.000 0.00 0.00 42.80 3.91
3185 6890 0.322277 ACATGCAAGTCCTCAGCCAG 60.322 55.000 0.00 0.00 0.00 4.85
3186 6891 1.378250 ATGCAAGTCCTCAGCCAGC 60.378 57.895 0.00 0.00 0.00 4.85
3188 6893 3.123620 CAAGTCCTCAGCCAGCGC 61.124 66.667 0.00 0.00 0.00 5.92
3192 6897 4.399395 TCCTCAGCCAGCGCCAAG 62.399 66.667 2.29 0.00 34.57 3.61
3212 6917 1.226542 CCTCCCTGCATGCATGAGT 59.773 57.895 30.25 0.00 0.00 3.41
3216 6921 1.005097 TCCCTGCATGCATGAGTTTCT 59.995 47.619 30.64 0.00 0.00 2.52
3253 6958 2.280592 GCTGTCCGAAACACCCGT 60.281 61.111 0.00 0.00 33.24 5.28
3259 6964 0.600782 TCCGAAACACCCGTTAGCAC 60.601 55.000 0.00 0.00 33.99 4.40
3262 6967 0.589708 GAAACACCCGTTAGCACCAC 59.410 55.000 0.00 0.00 33.99 4.16
3266 6971 2.746277 CCCGTTAGCACCACTGCC 60.746 66.667 0.00 0.00 45.53 4.85
3275 6980 4.457496 ACCACTGCCGATGCTCCG 62.457 66.667 0.00 0.00 38.71 4.63
3278 7086 2.755876 ACTGCCGATGCTCCGAGA 60.756 61.111 0.00 0.00 38.71 4.04
3324 7133 2.275418 CGCCACTGCCCCCTTATT 59.725 61.111 0.00 0.00 0.00 1.40
3335 7144 4.742012 TGCCCCCTTATTTGTTGTCTTTA 58.258 39.130 0.00 0.00 0.00 1.85
3341 7150 7.614192 CCCCCTTATTTGTTGTCTTTACTACAT 59.386 37.037 0.00 0.00 40.30 2.29
3358 7167 3.071874 ACATCACCGTCCACATTGATT 57.928 42.857 0.00 0.00 0.00 2.57
3363 7172 2.295909 CACCGTCCACATTGATTTTGGT 59.704 45.455 0.00 0.00 0.00 3.67
3394 7203 0.108138 CCGGTCTGATCCACCTTGAC 60.108 60.000 8.84 0.00 0.00 3.18
3395 7204 0.608130 CGGTCTGATCCACCTTGACA 59.392 55.000 8.84 0.00 0.00 3.58
3407 7216 4.080807 TCCACCTTGACAGTTCAGTTACAA 60.081 41.667 0.00 0.00 31.71 2.41
3435 7244 0.674895 GGAGCTCGTCCAAGTTGCAT 60.675 55.000 7.83 0.00 46.10 3.96
3488 7326 1.139853 CAGGCACTATGGAACTCCTCC 59.860 57.143 0.00 0.00 40.88 4.30
3489 7327 1.008938 AGGCACTATGGAACTCCTCCT 59.991 52.381 0.00 0.00 41.05 3.69
3490 7328 1.414550 GGCACTATGGAACTCCTCCTC 59.585 57.143 0.00 0.00 45.64 3.71
3501 7339 2.603021 ACTCCTCCTCATGTATCGCAT 58.397 47.619 0.00 0.00 38.60 4.73
3521 7359 3.576356 CATCGCGCCCACCATCAC 61.576 66.667 0.00 0.00 0.00 3.06
3522 7360 3.785859 ATCGCGCCCACCATCACT 61.786 61.111 0.00 0.00 0.00 3.41
3523 7361 2.431454 ATCGCGCCCACCATCACTA 61.431 57.895 0.00 0.00 0.00 2.74
3524 7362 2.369257 ATCGCGCCCACCATCACTAG 62.369 60.000 0.00 0.00 0.00 2.57
3525 7363 2.584608 GCGCCCACCATCACTAGT 59.415 61.111 0.00 0.00 0.00 2.57
3526 7364 1.820581 GCGCCCACCATCACTAGTA 59.179 57.895 0.00 0.00 0.00 1.82
3527 7365 0.249489 GCGCCCACCATCACTAGTAG 60.249 60.000 0.00 0.00 0.00 2.57
3528 7366 1.399714 CGCCCACCATCACTAGTAGA 58.600 55.000 3.59 0.00 0.00 2.59
3529 7367 1.754803 CGCCCACCATCACTAGTAGAA 59.245 52.381 3.59 0.00 0.00 2.10
3530 7368 2.167693 CGCCCACCATCACTAGTAGAAA 59.832 50.000 3.59 0.00 0.00 2.52
3531 7369 3.369052 CGCCCACCATCACTAGTAGAAAA 60.369 47.826 3.59 0.00 0.00 2.29
3532 7370 3.939592 GCCCACCATCACTAGTAGAAAAC 59.060 47.826 3.59 0.00 0.00 2.43
3533 7371 4.564821 GCCCACCATCACTAGTAGAAAACA 60.565 45.833 3.59 0.00 0.00 2.83
3534 7372 5.556915 CCCACCATCACTAGTAGAAAACAA 58.443 41.667 3.59 0.00 0.00 2.83
3541 7379 8.936864 CCATCACTAGTAGAAAACAAACCTTAG 58.063 37.037 3.59 0.00 0.00 2.18
3560 7398 5.104109 CCTTAGGTTTGGATCATTAGTCCCA 60.104 44.000 0.00 0.00 34.76 4.37
3561 7399 4.946160 AGGTTTGGATCATTAGTCCCAA 57.054 40.909 0.00 0.00 36.94 4.12
3570 7408 8.378115 TGGATCATTAGTCCCAATTTGATTTT 57.622 30.769 0.00 0.00 34.76 1.82
3586 7424 0.968393 TTTTGGCCCGGGACTAATGC 60.968 55.000 30.93 8.16 0.00 3.56
3605 7443 5.841957 ATGCAACCATTAGTTCTGATTCC 57.158 39.130 0.00 0.00 36.18 3.01
3648 7486 2.905075 CACAAGCATCATTAGTCCCGA 58.095 47.619 0.00 0.00 0.00 5.14
3662 7500 4.569719 AGTCCCGATTCATTTTGTACCT 57.430 40.909 0.00 0.00 0.00 3.08
3670 7508 6.649557 CCGATTCATTTTGTACCTATAGTCCC 59.350 42.308 0.00 0.00 0.00 4.46
3671 7509 7.214381 CGATTCATTTTGTACCTATAGTCCCA 58.786 38.462 0.00 0.00 0.00 4.37
3703 7541 3.012722 CCGGGGCTAAAGGGGTGA 61.013 66.667 0.00 0.00 0.00 4.02
3704 7542 2.383601 CCGGGGCTAAAGGGGTGAT 61.384 63.158 0.00 0.00 0.00 3.06
3705 7543 1.152963 CGGGGCTAAAGGGGTGATG 60.153 63.158 0.00 0.00 0.00 3.07
3706 7544 1.632018 CGGGGCTAAAGGGGTGATGA 61.632 60.000 0.00 0.00 0.00 2.92
3707 7545 0.106669 GGGGCTAAAGGGGTGATGAC 60.107 60.000 0.00 0.00 0.00 3.06
3708 7546 0.623723 GGGCTAAAGGGGTGATGACA 59.376 55.000 0.00 0.00 0.00 3.58
3709 7547 1.408822 GGGCTAAAGGGGTGATGACAG 60.409 57.143 0.00 0.00 0.00 3.51
3710 7548 1.408822 GGCTAAAGGGGTGATGACAGG 60.409 57.143 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 5.059161 CGGGCAGATGAAAGAAATAGATCA 58.941 41.667 0.00 0.00 0.00 2.92
64 65 0.387878 GCCATAGCCTCGAGATCACG 60.388 60.000 15.71 6.17 0.00 4.35
77 78 2.824041 GCACCACACCCGCCATAG 60.824 66.667 0.00 0.00 0.00 2.23
130 131 1.926108 AAGCTAGACTCGGGAACAGT 58.074 50.000 0.00 0.00 0.00 3.55
162 163 3.063704 CGCTTGGCCTTGCATCCA 61.064 61.111 17.94 0.00 0.00 3.41
169 170 1.898574 CACTTCACCGCTTGGCCTT 60.899 57.895 3.32 0.00 35.53 4.35
209 210 1.278637 CAAACGCCACTTGTCCGTC 59.721 57.895 0.00 0.00 33.59 4.79
212 213 0.664166 CATGCAAACGCCACTTGTCC 60.664 55.000 0.00 0.00 0.00 4.02
267 268 3.181425 CCATCTGCCTCCCTCCATTAAAT 60.181 47.826 0.00 0.00 0.00 1.40
291 292 4.693283 TCTCAGCATTCAAACTATACCCG 58.307 43.478 0.00 0.00 0.00 5.28
340 341 4.131088 GGTCCGAGAGCACCGTCC 62.131 72.222 0.00 0.00 0.00 4.79
353 354 2.975799 TTGAAGCAACGCGGGTCC 60.976 61.111 12.47 0.00 0.00 4.46
354 355 2.251371 GTTGAAGCAACGCGGGTC 59.749 61.111 12.47 0.04 34.63 4.46
355 356 2.515057 TGTTGAAGCAACGCGGGT 60.515 55.556 12.47 0.00 46.13 5.28
356 357 2.051345 GTGTTGAAGCAACGCGGG 60.051 61.111 12.47 2.74 46.13 6.13
360 361 1.268539 GGAACAGGTGTTGAAGCAACG 60.269 52.381 0.00 0.00 46.13 4.10
361 362 1.748493 TGGAACAGGTGTTGAAGCAAC 59.252 47.619 0.00 3.47 43.78 4.17
362 363 2.136298 TGGAACAGGTGTTGAAGCAA 57.864 45.000 0.00 0.00 38.56 3.91
363 364 2.136298 TTGGAACAGGTGTTGAAGCA 57.864 45.000 0.00 0.00 42.39 3.91
364 365 2.622942 TCATTGGAACAGGTGTTGAAGC 59.377 45.455 0.00 0.00 42.39 3.86
365 366 4.136796 TCTCATTGGAACAGGTGTTGAAG 58.863 43.478 0.00 0.00 42.39 3.02
366 367 4.163441 TCTCATTGGAACAGGTGTTGAA 57.837 40.909 0.00 0.00 42.39 2.69
368 369 4.097741 TGTTTCTCATTGGAACAGGTGTTG 59.902 41.667 0.00 0.00 42.39 3.33
369 370 4.277476 TGTTTCTCATTGGAACAGGTGTT 58.723 39.130 0.00 0.00 42.39 3.32
370 371 3.897239 TGTTTCTCATTGGAACAGGTGT 58.103 40.909 0.00 0.00 42.39 4.16
371 372 4.097741 TGTTGTTTCTCATTGGAACAGGTG 59.902 41.667 0.00 0.00 42.39 4.00
372 373 4.277476 TGTTGTTTCTCATTGGAACAGGT 58.723 39.130 0.00 0.00 42.39 4.00
373 374 4.916983 TGTTGTTTCTCATTGGAACAGG 57.083 40.909 0.00 0.00 42.39 4.00
375 376 5.507817 GCAGATGTTGTTTCTCATTGGAACA 60.508 40.000 0.00 0.00 0.00 3.18
376 377 4.919754 GCAGATGTTGTTTCTCATTGGAAC 59.080 41.667 0.00 0.00 0.00 3.62
377 378 4.828939 AGCAGATGTTGTTTCTCATTGGAA 59.171 37.500 0.00 0.00 0.00 3.53
378 379 4.401022 AGCAGATGTTGTTTCTCATTGGA 58.599 39.130 0.00 0.00 0.00 3.53
379 380 4.778534 AGCAGATGTTGTTTCTCATTGG 57.221 40.909 0.00 0.00 0.00 3.16
380 381 5.404366 CCAAAGCAGATGTTGTTTCTCATTG 59.596 40.000 0.00 0.00 29.15 2.82
382 383 4.021719 CCCAAAGCAGATGTTGTTTCTCAT 60.022 41.667 0.00 0.00 29.15 2.90
383 384 3.318839 CCCAAAGCAGATGTTGTTTCTCA 59.681 43.478 0.00 0.00 29.15 3.27
384 385 3.319122 ACCCAAAGCAGATGTTGTTTCTC 59.681 43.478 0.00 0.00 29.15 2.87
385 386 3.299503 ACCCAAAGCAGATGTTGTTTCT 58.700 40.909 0.00 0.00 29.15 2.52
386 387 3.642705 GACCCAAAGCAGATGTTGTTTC 58.357 45.455 0.00 0.00 29.15 2.78
387 388 2.034558 CGACCCAAAGCAGATGTTGTTT 59.965 45.455 0.00 0.00 0.00 2.83
388 389 1.608590 CGACCCAAAGCAGATGTTGTT 59.391 47.619 0.00 0.00 0.00 2.83
391 392 1.244019 GCCGACCCAAAGCAGATGTT 61.244 55.000 0.00 0.00 0.00 2.71
392 393 1.675641 GCCGACCCAAAGCAGATGT 60.676 57.895 0.00 0.00 0.00 3.06
394 395 1.033746 CATGCCGACCCAAAGCAGAT 61.034 55.000 0.00 0.00 40.40 2.90
395 396 1.675310 CATGCCGACCCAAAGCAGA 60.675 57.895 0.00 0.00 40.40 4.26
396 397 1.243342 TTCATGCCGACCCAAAGCAG 61.243 55.000 0.00 0.00 40.40 4.24
397 398 0.611618 ATTCATGCCGACCCAAAGCA 60.612 50.000 0.00 0.00 41.50 3.91
398 399 0.179129 CATTCATGCCGACCCAAAGC 60.179 55.000 0.00 0.00 0.00 3.51
410 411 3.867055 ACGATTAGCTTCGCATTCATG 57.133 42.857 7.71 0.00 42.82 3.07
412 413 4.402583 CAAAACGATTAGCTTCGCATTCA 58.597 39.130 7.71 0.00 42.82 2.57
413 414 3.786048 CCAAAACGATTAGCTTCGCATTC 59.214 43.478 7.71 0.00 42.82 2.67
414 415 3.438781 TCCAAAACGATTAGCTTCGCATT 59.561 39.130 7.71 1.30 42.82 3.56
415 416 3.006940 TCCAAAACGATTAGCTTCGCAT 58.993 40.909 7.71 0.00 42.82 4.73
416 417 2.158841 GTCCAAAACGATTAGCTTCGCA 59.841 45.455 7.71 0.00 42.82 5.10
417 418 2.770532 GTCCAAAACGATTAGCTTCGC 58.229 47.619 7.71 0.00 42.82 4.70
429 430 3.121738 TCTCCCTTTCTCGTCCAAAAC 57.878 47.619 0.00 0.00 0.00 2.43
430 431 4.530946 ACTATCTCCCTTTCTCGTCCAAAA 59.469 41.667 0.00 0.00 0.00 2.44
432 433 3.447586 CACTATCTCCCTTTCTCGTCCAA 59.552 47.826 0.00 0.00 0.00 3.53
434 435 3.025262 ACACTATCTCCCTTTCTCGTCC 58.975 50.000 0.00 0.00 0.00 4.79
435 436 3.181485 CCACACTATCTCCCTTTCTCGTC 60.181 52.174 0.00 0.00 0.00 4.20
436 437 2.761208 CCACACTATCTCCCTTTCTCGT 59.239 50.000 0.00 0.00 0.00 4.18
437 438 2.101582 CCCACACTATCTCCCTTTCTCG 59.898 54.545 0.00 0.00 0.00 4.04
438 439 3.375699 TCCCACACTATCTCCCTTTCTC 58.624 50.000 0.00 0.00 0.00 2.87
439 440 3.012959 TCTCCCACACTATCTCCCTTTCT 59.987 47.826 0.00 0.00 0.00 2.52
440 441 3.375699 TCTCCCACACTATCTCCCTTTC 58.624 50.000 0.00 0.00 0.00 2.62
441 442 3.379452 CTCTCCCACACTATCTCCCTTT 58.621 50.000 0.00 0.00 0.00 3.11
442 443 2.359781 CCTCTCCCACACTATCTCCCTT 60.360 54.545 0.00 0.00 0.00 3.95
443 444 1.219213 CCTCTCCCACACTATCTCCCT 59.781 57.143 0.00 0.00 0.00 4.20
444 445 1.710816 CCTCTCCCACACTATCTCCC 58.289 60.000 0.00 0.00 0.00 4.30
445 446 1.062810 ACCCTCTCCCACACTATCTCC 60.063 57.143 0.00 0.00 0.00 3.71
446 447 2.463047 ACCCTCTCCCACACTATCTC 57.537 55.000 0.00 0.00 0.00 2.75
447 448 2.316372 AGAACCCTCTCCCACACTATCT 59.684 50.000 0.00 0.00 0.00 1.98
448 449 2.432510 CAGAACCCTCTCCCACACTATC 59.567 54.545 0.00 0.00 0.00 2.08
450 451 1.149288 ACAGAACCCTCTCCCACACTA 59.851 52.381 0.00 0.00 0.00 2.74
452 453 0.035458 CACAGAACCCTCTCCCACAC 59.965 60.000 0.00 0.00 0.00 3.82
453 454 1.127567 CCACAGAACCCTCTCCCACA 61.128 60.000 0.00 0.00 0.00 4.17
454 455 1.679898 CCACAGAACCCTCTCCCAC 59.320 63.158 0.00 0.00 0.00 4.61
457 458 2.671682 GCCCACAGAACCCTCTCC 59.328 66.667 0.00 0.00 0.00 3.71
458 459 1.779061 TTGGCCCACAGAACCCTCTC 61.779 60.000 0.00 0.00 0.00 3.20
459 460 1.774217 TTGGCCCACAGAACCCTCT 60.774 57.895 0.00 0.00 0.00 3.69
460 461 1.303643 CTTGGCCCACAGAACCCTC 60.304 63.158 0.00 0.00 0.00 4.30
465 466 0.032615 ACAAACCTTGGCCCACAGAA 60.033 50.000 0.00 0.00 34.12 3.02
466 467 0.467290 GACAAACCTTGGCCCACAGA 60.467 55.000 0.00 0.00 30.38 3.41
469 470 1.104577 TTCGACAAACCTTGGCCCAC 61.105 55.000 0.00 0.00 34.26 4.61
470 471 1.104577 GTTCGACAAACCTTGGCCCA 61.105 55.000 0.00 0.00 34.26 5.36
472 473 1.281656 CGTTCGACAAACCTTGGCC 59.718 57.895 0.00 0.00 34.26 5.36
473 474 1.370051 GCGTTCGACAAACCTTGGC 60.370 57.895 0.00 0.00 34.11 4.52
474 475 1.083015 CGCGTTCGACAAACCTTGG 60.083 57.895 0.00 0.00 38.10 3.61
475 476 0.653323 CACGCGTTCGACAAACCTTG 60.653 55.000 10.22 0.00 39.41 3.61
476 477 1.639534 CACGCGTTCGACAAACCTT 59.360 52.632 10.22 0.00 39.41 3.50
477 478 2.877974 GCACGCGTTCGACAAACCT 61.878 57.895 10.22 0.00 39.41 3.50
479 480 2.785739 CGCACGCGTTCGACAAAC 60.786 61.111 26.69 0.00 39.41 2.93
501 502 4.379243 CAAGGCGTCCGGAGTGCT 62.379 66.667 23.63 10.50 0.00 4.40
502 503 3.876589 TTCAAGGCGTCCGGAGTGC 62.877 63.158 18.17 18.17 0.00 4.40
504 505 1.004918 CTTTCAAGGCGTCCGGAGT 60.005 57.895 3.06 0.00 0.00 3.85
505 506 2.391389 GCTTTCAAGGCGTCCGGAG 61.391 63.158 3.06 0.00 0.00 4.63
506 507 2.358247 GCTTTCAAGGCGTCCGGA 60.358 61.111 0.00 0.00 0.00 5.14
507 508 3.431725 GGCTTTCAAGGCGTCCGG 61.432 66.667 0.00 0.00 41.93 5.14
515 516 0.627986 AGGGATGGAGGGCTTTCAAG 59.372 55.000 0.00 0.00 0.00 3.02
516 517 0.625849 GAGGGATGGAGGGCTTTCAA 59.374 55.000 0.00 0.00 0.00 2.69
518 519 0.182299 CTGAGGGATGGAGGGCTTTC 59.818 60.000 0.00 0.00 0.00 2.62
519 520 0.551131 ACTGAGGGATGGAGGGCTTT 60.551 55.000 0.00 0.00 0.00 3.51
520 521 0.551131 AACTGAGGGATGGAGGGCTT 60.551 55.000 0.00 0.00 0.00 4.35
521 522 0.551131 AAACTGAGGGATGGAGGGCT 60.551 55.000 0.00 0.00 0.00 5.19
522 523 0.394899 CAAACTGAGGGATGGAGGGC 60.395 60.000 0.00 0.00 0.00 5.19
523 524 0.394899 GCAAACTGAGGGATGGAGGG 60.395 60.000 0.00 0.00 0.00 4.30
526 527 0.690192 TTCGCAAACTGAGGGATGGA 59.310 50.000 0.00 0.00 0.00 3.41
528 529 3.641437 TTTTTCGCAAACTGAGGGATG 57.359 42.857 0.00 0.00 0.00 3.51
545 546 0.250166 CCGGTCTGGACGTCCTTTTT 60.250 55.000 33.39 0.00 42.00 1.94
546 547 1.370064 CCGGTCTGGACGTCCTTTT 59.630 57.895 33.39 0.00 42.00 2.27
549 550 2.675772 GACCGGTCTGGACGTCCT 60.676 66.667 33.39 13.17 42.00 3.85
550 551 3.756727 GGACCGGTCTGGACGTCC 61.757 72.222 32.52 28.17 42.00 4.79
551 552 4.112341 CGGACCGGTCTGGACGTC 62.112 72.222 32.28 14.36 42.00 4.34
552 553 4.962836 ACGGACCGGTCTGGACGT 62.963 66.667 39.46 32.01 45.21 4.34
553 554 2.747460 TACGGACCGGTCTGGACG 60.747 66.667 39.46 31.41 43.69 4.79
554 555 1.377725 TCTACGGACCGGTCTGGAC 60.378 63.158 39.46 21.09 42.00 4.02
555 556 1.377725 GTCTACGGACCGGTCTGGA 60.378 63.158 39.46 33.82 42.00 3.86
556 557 2.758089 CGTCTACGGACCGGTCTGG 61.758 68.421 39.46 29.48 40.22 3.86
558 559 0.393537 ATTCGTCTACGGACCGGTCT 60.394 55.000 32.52 17.66 39.15 3.85
559 560 0.248377 CATTCGTCTACGGACCGGTC 60.248 60.000 27.04 27.04 39.15 4.79
562 563 1.937846 CGCATTCGTCTACGGACCG 60.938 63.158 13.61 13.61 39.15 4.79
563 564 3.993103 CGCATTCGTCTACGGACC 58.007 61.111 2.24 0.00 39.15 4.46
567 568 1.202110 ACAGTACCGCATTCGTCTACG 60.202 52.381 0.00 0.00 41.45 3.51
569 570 1.814394 ACACAGTACCGCATTCGTCTA 59.186 47.619 0.00 0.00 0.00 2.59
570 571 0.601558 ACACAGTACCGCATTCGTCT 59.398 50.000 0.00 0.00 0.00 4.18
571 572 1.126113 CAACACAGTACCGCATTCGTC 59.874 52.381 0.00 0.00 0.00 4.20
572 573 1.144969 CAACACAGTACCGCATTCGT 58.855 50.000 0.00 0.00 0.00 3.85
573 574 0.442310 CCAACACAGTACCGCATTCG 59.558 55.000 0.00 0.00 0.00 3.34
574 575 1.803334 TCCAACACAGTACCGCATTC 58.197 50.000 0.00 0.00 0.00 2.67
575 576 2.083774 CATCCAACACAGTACCGCATT 58.916 47.619 0.00 0.00 0.00 3.56
576 577 1.678728 CCATCCAACACAGTACCGCAT 60.679 52.381 0.00 0.00 0.00 4.73
577 578 0.321210 CCATCCAACACAGTACCGCA 60.321 55.000 0.00 0.00 0.00 5.69
578 579 1.644786 GCCATCCAACACAGTACCGC 61.645 60.000 0.00 0.00 0.00 5.68
579 580 0.321210 TGCCATCCAACACAGTACCG 60.321 55.000 0.00 0.00 0.00 4.02
581 582 3.067461 TGTTTTGCCATCCAACACAGTAC 59.933 43.478 0.00 0.00 38.74 2.73
582 583 3.067461 GTGTTTTGCCATCCAACACAGTA 59.933 43.478 9.06 0.00 46.37 2.74
583 584 2.106566 TGTTTTGCCATCCAACACAGT 58.893 42.857 0.00 0.00 38.74 3.55
584 585 2.472816 GTGTTTTGCCATCCAACACAG 58.527 47.619 9.06 0.00 46.37 3.66
585 586 2.593346 GTGTTTTGCCATCCAACACA 57.407 45.000 9.06 0.00 46.37 3.72
587 588 1.066303 GACGTGTTTTGCCATCCAACA 59.934 47.619 0.00 0.00 31.97 3.33
588 589 1.601914 GGACGTGTTTTGCCATCCAAC 60.602 52.381 0.00 0.00 31.97 3.77
590 591 0.466372 TGGACGTGTTTTGCCATCCA 60.466 50.000 0.00 0.00 33.86 3.41
591 592 0.887933 ATGGACGTGTTTTGCCATCC 59.112 50.000 0.00 0.00 36.43 3.51
592 593 2.747446 AGTATGGACGTGTTTTGCCATC 59.253 45.455 7.42 1.61 41.19 3.51
593 594 2.487762 CAGTATGGACGTGTTTTGCCAT 59.512 45.455 8.98 8.98 43.22 4.40
596 597 2.916111 CACAGTATGGACGTGTTTTGC 58.084 47.619 0.00 0.00 43.62 3.68
597 598 2.661709 CGCACAGTATGGACGTGTTTTG 60.662 50.000 0.00 0.00 43.62 2.44
598 599 1.529438 CGCACAGTATGGACGTGTTTT 59.471 47.619 0.00 0.00 43.62 2.43
599 600 1.144969 CGCACAGTATGGACGTGTTT 58.855 50.000 0.00 0.00 43.62 2.83
600 601 0.669318 CCGCACAGTATGGACGTGTT 60.669 55.000 0.00 0.00 43.62 3.32
602 603 1.076533 GACCGCACAGTATGGACGTG 61.077 60.000 0.00 0.00 43.62 4.49
603 604 1.214589 GACCGCACAGTATGGACGT 59.785 57.895 0.00 0.00 43.62 4.34
604 605 1.518572 GGACCGCACAGTATGGACG 60.519 63.158 0.00 0.00 43.62 4.79
605 606 0.036765 TTGGACCGCACAGTATGGAC 60.037 55.000 0.00 0.00 43.62 4.02
607 608 0.802494 GTTTGGACCGCACAGTATGG 59.198 55.000 0.00 0.00 43.62 2.74
608 609 0.442310 CGTTTGGACCGCACAGTATG 59.558 55.000 0.00 0.00 46.00 2.39
610 611 1.301087 CCGTTTGGACCGCACAGTA 60.301 57.895 0.00 0.00 37.49 2.74
611 612 2.590575 CCGTTTGGACCGCACAGT 60.591 61.111 0.00 0.00 37.49 3.55
612 613 2.280524 TCCGTTTGGACCGCACAG 60.281 61.111 0.00 0.00 40.17 3.66
621 622 1.737793 GAACCACTAGCATCCGTTTGG 59.262 52.381 0.00 0.00 0.00 3.28
622 623 1.393539 CGAACCACTAGCATCCGTTTG 59.606 52.381 0.00 0.00 0.00 2.93
623 624 1.674817 CCGAACCACTAGCATCCGTTT 60.675 52.381 0.00 0.00 0.00 3.60
624 625 0.108329 CCGAACCACTAGCATCCGTT 60.108 55.000 0.00 0.00 0.00 4.44
627 628 0.462047 CACCCGAACCACTAGCATCC 60.462 60.000 0.00 0.00 0.00 3.51
629 630 0.036388 CACACCCGAACCACTAGCAT 60.036 55.000 0.00 0.00 0.00 3.79
630 631 1.369692 CACACCCGAACCACTAGCA 59.630 57.895 0.00 0.00 0.00 3.49
632 633 0.037605 GGACACACCCGAACCACTAG 60.038 60.000 0.00 0.00 0.00 2.57
634 635 1.628238 TTGGACACACCCGAACCACT 61.628 55.000 0.00 0.00 38.00 4.00
635 636 0.748729 TTTGGACACACCCGAACCAC 60.749 55.000 0.00 0.00 38.00 4.16
637 638 0.596082 CATTTGGACACACCCGAACC 59.404 55.000 0.00 0.00 38.00 3.62
638 639 0.039527 GCATTTGGACACACCCGAAC 60.040 55.000 0.00 0.00 38.00 3.95
639 640 0.466372 TGCATTTGGACACACCCGAA 60.466 50.000 0.00 0.00 38.00 4.30
640 641 0.251121 ATGCATTTGGACACACCCGA 60.251 50.000 0.00 0.00 38.00 5.14
641 642 0.171007 GATGCATTTGGACACACCCG 59.829 55.000 0.00 0.00 38.00 5.28
643 644 0.171007 CGGATGCATTTGGACACACC 59.829 55.000 0.00 0.00 39.54 4.16
644 645 0.881118 ACGGATGCATTTGGACACAC 59.119 50.000 0.00 0.00 0.00 3.82
645 646 0.880441 CACGGATGCATTTGGACACA 59.120 50.000 0.00 0.00 0.00 3.72
646 647 1.131126 CTCACGGATGCATTTGGACAC 59.869 52.381 0.00 0.00 0.00 3.67
647 648 1.452110 CTCACGGATGCATTTGGACA 58.548 50.000 0.00 0.00 0.00 4.02
649 650 0.322366 TGCTCACGGATGCATTTGGA 60.322 50.000 0.00 0.00 33.94 3.53
656 657 0.379669 CCTCAAATGCTCACGGATGC 59.620 55.000 0.00 0.00 0.00 3.91
657 658 1.019673 CCCTCAAATGCTCACGGATG 58.980 55.000 0.00 0.00 0.00 3.51
658 659 0.107017 CCCCTCAAATGCTCACGGAT 60.107 55.000 0.00 0.00 0.00 4.18
659 660 1.299648 CCCCTCAAATGCTCACGGA 59.700 57.895 0.00 0.00 0.00 4.69
662 663 2.409870 CGGCCCCTCAAATGCTCAC 61.410 63.158 0.00 0.00 0.00 3.51
663 664 2.045045 CGGCCCCTCAAATGCTCA 60.045 61.111 0.00 0.00 0.00 4.26
664 665 2.631012 ATCCGGCCCCTCAAATGCTC 62.631 60.000 0.00 0.00 0.00 4.26
666 667 1.329913 AAATCCGGCCCCTCAAATGC 61.330 55.000 0.00 0.00 0.00 3.56
667 668 0.461135 CAAATCCGGCCCCTCAAATG 59.539 55.000 0.00 0.00 0.00 2.32
668 669 1.329913 GCAAATCCGGCCCCTCAAAT 61.330 55.000 0.00 0.00 0.00 2.32
669 670 1.981853 GCAAATCCGGCCCCTCAAA 60.982 57.895 0.00 0.00 0.00 2.69
670 671 2.362375 GCAAATCCGGCCCCTCAA 60.362 61.111 0.00 0.00 0.00 3.02
677 678 2.008268 CTGGACATGGCAAATCCGGC 62.008 60.000 14.31 0.00 37.80 6.13
678 679 0.680921 ACTGGACATGGCAAATCCGG 60.681 55.000 21.66 21.66 43.50 5.14
679 680 1.135315 CAACTGGACATGGCAAATCCG 60.135 52.381 13.83 11.29 37.80 4.18
680 681 1.895131 ACAACTGGACATGGCAAATCC 59.105 47.619 12.31 12.31 0.00 3.01
681 682 4.009675 TCTACAACTGGACATGGCAAATC 58.990 43.478 0.00 0.00 0.00 2.17
682 683 4.032960 TCTACAACTGGACATGGCAAAT 57.967 40.909 0.00 0.00 0.00 2.32
683 684 3.500448 TCTACAACTGGACATGGCAAA 57.500 42.857 0.00 0.00 0.00 3.68
684 685 3.346315 CATCTACAACTGGACATGGCAA 58.654 45.455 0.00 0.00 0.00 4.52
685 686 2.940971 GCATCTACAACTGGACATGGCA 60.941 50.000 0.00 0.00 0.00 4.92
686 687 1.672881 GCATCTACAACTGGACATGGC 59.327 52.381 0.00 0.00 0.00 4.40
687 688 3.272574 AGCATCTACAACTGGACATGG 57.727 47.619 0.00 0.00 0.00 3.66
688 689 6.986231 TGTTATAGCATCTACAACTGGACATG 59.014 38.462 0.00 0.00 0.00 3.21
689 690 6.986817 GTGTTATAGCATCTACAACTGGACAT 59.013 38.462 0.00 0.00 0.00 3.06
690 691 6.338146 GTGTTATAGCATCTACAACTGGACA 58.662 40.000 0.00 0.00 0.00 4.02
691 692 5.753921 GGTGTTATAGCATCTACAACTGGAC 59.246 44.000 0.00 0.00 0.00 4.02
694 695 6.341316 AGTGGTGTTATAGCATCTACAACTG 58.659 40.000 1.31 0.00 39.30 3.16
695 696 6.546428 AGTGGTGTTATAGCATCTACAACT 57.454 37.500 1.31 0.00 39.30 3.16
696 697 7.599245 GGATAGTGGTGTTATAGCATCTACAAC 59.401 40.741 1.31 0.00 39.30 3.32
697 698 7.509318 AGGATAGTGGTGTTATAGCATCTACAA 59.491 37.037 1.31 0.00 39.30 2.41
698 699 7.010771 AGGATAGTGGTGTTATAGCATCTACA 58.989 38.462 1.31 0.00 39.30 2.74
699 700 7.469537 AGGATAGTGGTGTTATAGCATCTAC 57.530 40.000 1.31 0.69 39.30 2.59
704 705 5.960704 TCCTAGGATAGTGGTGTTATAGCA 58.039 41.667 7.62 0.00 36.82 3.49
705 706 6.267014 TGTTCCTAGGATAGTGGTGTTATAGC 59.733 42.308 13.57 0.00 36.82 2.97
707 708 9.305555 GTATGTTCCTAGGATAGTGGTGTTATA 57.694 37.037 13.57 0.00 36.82 0.98
709 710 7.359849 AGTATGTTCCTAGGATAGTGGTGTTA 58.640 38.462 13.57 0.00 36.82 2.41
710 711 6.203072 AGTATGTTCCTAGGATAGTGGTGTT 58.797 40.000 13.57 0.00 36.82 3.32
711 712 5.778542 AGTATGTTCCTAGGATAGTGGTGT 58.221 41.667 13.57 0.00 36.82 4.16
716 717 9.629878 CGGATTATAGTATGTTCCTAGGATAGT 57.370 37.037 13.57 7.84 36.82 2.12
717 718 9.848710 TCGGATTATAGTATGTTCCTAGGATAG 57.151 37.037 13.57 0.00 38.80 2.08
718 719 9.848710 CTCGGATTATAGTATGTTCCTAGGATA 57.151 37.037 13.57 5.44 0.00 2.59
721 722 6.603997 AGCTCGGATTATAGTATGTTCCTAGG 59.396 42.308 0.82 0.82 0.00 3.02
722 723 7.201750 GGAGCTCGGATTATAGTATGTTCCTAG 60.202 44.444 7.83 9.47 0.00 3.02
723 724 6.602406 GGAGCTCGGATTATAGTATGTTCCTA 59.398 42.308 7.83 1.51 0.00 2.94
724 725 5.419471 GGAGCTCGGATTATAGTATGTTCCT 59.581 44.000 7.83 0.00 0.00 3.36
725 726 5.185249 TGGAGCTCGGATTATAGTATGTTCC 59.815 44.000 7.83 0.00 0.00 3.62
726 727 6.094061 GTGGAGCTCGGATTATAGTATGTTC 58.906 44.000 7.83 0.00 0.00 3.18
727 728 5.538813 TGTGGAGCTCGGATTATAGTATGTT 59.461 40.000 7.83 0.00 0.00 2.71
729 730 5.644977 TGTGGAGCTCGGATTATAGTATG 57.355 43.478 7.83 0.00 0.00 2.39
732 733 3.898123 ACATGTGGAGCTCGGATTATAGT 59.102 43.478 7.83 0.00 0.00 2.12
734 735 4.082190 GCTACATGTGGAGCTCGGATTATA 60.082 45.833 14.15 0.00 35.73 0.98
735 736 3.306364 GCTACATGTGGAGCTCGGATTAT 60.306 47.826 14.15 0.00 35.73 1.28
736 737 2.035961 GCTACATGTGGAGCTCGGATTA 59.964 50.000 14.15 0.00 35.73 1.75
737 738 1.202580 GCTACATGTGGAGCTCGGATT 60.203 52.381 14.15 0.00 35.73 3.01
739 740 0.970427 TGCTACATGTGGAGCTCGGA 60.970 55.000 18.88 0.00 39.54 4.55
740 741 0.108186 TTGCTACATGTGGAGCTCGG 60.108 55.000 18.88 0.00 39.54 4.63
741 742 1.284657 CTTGCTACATGTGGAGCTCG 58.715 55.000 18.88 8.24 39.54 5.03
742 743 2.393271 ACTTGCTACATGTGGAGCTC 57.607 50.000 18.88 4.71 39.54 4.09
743 744 3.452264 TGATACTTGCTACATGTGGAGCT 59.548 43.478 18.88 4.57 39.54 4.09
744 745 3.557595 GTGATACTTGCTACATGTGGAGC 59.442 47.826 14.15 13.39 39.25 4.70
745 746 4.568359 GTGTGATACTTGCTACATGTGGAG 59.432 45.833 14.15 4.88 0.00 3.86
746 747 4.020662 TGTGTGATACTTGCTACATGTGGA 60.021 41.667 14.15 0.00 0.00 4.02
747 748 4.252878 TGTGTGATACTTGCTACATGTGG 58.747 43.478 9.11 6.75 0.00 4.17
748 749 5.861222 TTGTGTGATACTTGCTACATGTG 57.139 39.130 9.11 0.00 0.00 3.21
749 750 8.737168 ATATTTGTGTGATACTTGCTACATGT 57.263 30.769 2.69 2.69 0.00 3.21
751 752 9.830975 TGTATATTTGTGTGATACTTGCTACAT 57.169 29.630 0.00 0.00 0.00 2.29
753 754 9.916397 GTTGTATATTTGTGTGATACTTGCTAC 57.084 33.333 0.00 0.00 0.00 3.58
754 755 9.660180 TGTTGTATATTTGTGTGATACTTGCTA 57.340 29.630 0.00 0.00 0.00 3.49
755 756 8.560355 TGTTGTATATTTGTGTGATACTTGCT 57.440 30.769 0.00 0.00 0.00 3.91
756 757 9.787532 AATGTTGTATATTTGTGTGATACTTGC 57.212 29.630 0.00 0.00 0.00 4.01
762 763 9.357652 GCAGAAAATGTTGTATATTTGTGTGAT 57.642 29.630 0.00 0.00 0.00 3.06
763 764 8.355913 TGCAGAAAATGTTGTATATTTGTGTGA 58.644 29.630 0.00 0.00 0.00 3.58
764 765 8.518151 TGCAGAAAATGTTGTATATTTGTGTG 57.482 30.769 0.00 0.00 0.00 3.82
765 766 9.357652 GATGCAGAAAATGTTGTATATTTGTGT 57.642 29.630 0.00 0.00 0.00 3.72
766 767 9.577110 AGATGCAGAAAATGTTGTATATTTGTG 57.423 29.630 0.00 0.00 0.00 3.33
775 776 9.846248 GTAGAATTAAGATGCAGAAAATGTTGT 57.154 29.630 0.00 0.00 0.00 3.32
776 777 9.844790 TGTAGAATTAAGATGCAGAAAATGTTG 57.155 29.630 0.00 0.00 0.00 3.33
780 781 9.412460 TGGATGTAGAATTAAGATGCAGAAAAT 57.588 29.630 0.00 0.00 0.00 1.82
781 782 8.806429 TGGATGTAGAATTAAGATGCAGAAAA 57.194 30.769 0.00 0.00 0.00 2.29
783 784 8.806429 TTTGGATGTAGAATTAAGATGCAGAA 57.194 30.769 0.00 0.00 0.00 3.02
826 827 9.768662 ATGGATACGTACGGAGTTAAAAATATT 57.231 29.630 21.06 0.00 41.42 1.28
827 828 9.199982 CATGGATACGTACGGAGTTAAAAATAT 57.800 33.333 21.06 3.85 41.42 1.28
828 829 7.652909 CCATGGATACGTACGGAGTTAAAAATA 59.347 37.037 21.06 0.00 41.42 1.40
829 830 6.480981 CCATGGATACGTACGGAGTTAAAAAT 59.519 38.462 21.06 0.00 41.42 1.82
830 831 5.811613 CCATGGATACGTACGGAGTTAAAAA 59.188 40.000 21.06 0.00 41.42 1.94
831 832 5.105392 ACCATGGATACGTACGGAGTTAAAA 60.105 40.000 21.47 0.00 41.42 1.52
832 833 4.402155 ACCATGGATACGTACGGAGTTAAA 59.598 41.667 21.47 0.00 41.42 1.52
833 834 3.953612 ACCATGGATACGTACGGAGTTAA 59.046 43.478 21.47 0.00 41.42 2.01
835 836 2.381911 ACCATGGATACGTACGGAGTT 58.618 47.619 21.47 0.00 41.42 3.01
836 837 2.062971 ACCATGGATACGTACGGAGT 57.937 50.000 21.47 4.51 44.07 3.85
838 839 2.290367 CGTAACCATGGATACGTACGGA 59.710 50.000 34.21 12.56 40.39 4.69
839 840 2.653890 CGTAACCATGGATACGTACGG 58.346 52.381 34.21 15.27 40.39 4.02
860 861 0.464036 ATTTCGGATAGAGCACGGCA 59.536 50.000 0.00 0.00 0.00 5.69
862 863 2.128035 GTGATTTCGGATAGAGCACGG 58.872 52.381 0.00 0.00 0.00 4.94
863 864 2.809446 TGTGATTTCGGATAGAGCACG 58.191 47.619 0.00 0.00 33.13 5.34
864 865 3.932710 TGTTGTGATTTCGGATAGAGCAC 59.067 43.478 0.00 0.00 0.00 4.40
865 866 4.200838 TGTTGTGATTTCGGATAGAGCA 57.799 40.909 0.00 0.00 0.00 4.26
866 867 4.494855 GCTTGTTGTGATTTCGGATAGAGC 60.495 45.833 0.00 0.00 0.00 4.09
867 868 4.872691 AGCTTGTTGTGATTTCGGATAGAG 59.127 41.667 0.00 0.00 0.00 2.43
868 869 4.832248 AGCTTGTTGTGATTTCGGATAGA 58.168 39.130 0.00 0.00 0.00 1.98
870 871 4.832248 AGAGCTTGTTGTGATTTCGGATA 58.168 39.130 0.00 0.00 0.00 2.59
872 873 3.067106 GAGAGCTTGTTGTGATTTCGGA 58.933 45.455 0.00 0.00 0.00 4.55
873 874 3.070018 AGAGAGCTTGTTGTGATTTCGG 58.930 45.455 0.00 0.00 0.00 4.30
875 876 5.679734 TTGAGAGAGCTTGTTGTGATTTC 57.320 39.130 0.00 0.00 0.00 2.17
876 877 6.455360 TTTTGAGAGAGCTTGTTGTGATTT 57.545 33.333 0.00 0.00 0.00 2.17
877 878 6.455360 TTTTTGAGAGAGCTTGTTGTGATT 57.545 33.333 0.00 0.00 0.00 2.57
984 985 5.726980 TTTATAGGTTGTGTGTACCGACT 57.273 39.130 0.00 0.00 40.69 4.18
1025 1026 2.398554 CGTTGGGGATTGCGACCAG 61.399 63.158 0.00 0.00 35.37 4.00
1261 4653 1.738099 GTTGTCGATGACGCAGGCT 60.738 57.895 0.00 0.00 39.58 4.58
1465 4878 2.668279 GCTTTGATCATCAAAACGCGGT 60.668 45.455 13.84 0.00 44.69 5.68
1609 5200 2.124411 GAAGCCTCCCCCAGTGTAATA 58.876 52.381 0.00 0.00 0.00 0.98
1615 5206 3.322466 CACGAAGCCTCCCCCAGT 61.322 66.667 0.00 0.00 0.00 4.00
1675 5275 0.729478 CGACGCTGATGACGTTGTCT 60.729 55.000 0.00 0.00 45.24 3.41
1726 5356 1.338655 TCGAACGACATGACCTTGTCA 59.661 47.619 0.00 0.00 46.90 3.58
1949 5582 2.028523 GCGTTCTCGTCTGAATGATGTG 59.971 50.000 10.30 0.00 39.49 3.21
2296 5929 5.635280 GGATAATGACGACGATGATGATTGT 59.365 40.000 0.00 0.00 0.00 2.71
2348 5985 1.553248 TCAATGGCTACGCTGGTAGTT 59.447 47.619 3.50 0.00 46.42 2.24
2392 6029 1.462670 CTCTTTCCTGCGAACAAGCTC 59.537 52.381 0.00 0.00 38.13 4.09
2456 6098 1.000385 CCACGTGACACATTTGGCAAT 60.000 47.619 19.30 0.00 44.76 3.56
2462 6104 2.210116 GTCTGACCACGTGACACATTT 58.790 47.619 19.30 0.00 0.00 2.32
2571 6248 8.114331 TGCTTCTTTGACAACTCAATTGATAT 57.886 30.769 8.96 0.00 41.23 1.63
2771 6473 4.394920 TGAGAGTTGTGACTGGTTTGTTTC 59.605 41.667 0.00 0.00 35.88 2.78
3016 6721 2.665519 CGTTTAAGTTTGAGCAGCGCAT 60.666 45.455 11.47 0.00 0.00 4.73
3150 6855 9.619316 GACTTGCATGTACACAAAATTAATGTA 57.381 29.630 5.05 0.00 0.00 2.29
3188 6893 2.441532 CATGCAGGGAGGCCTTGG 60.442 66.667 6.77 0.00 30.84 3.61
3192 6897 3.224324 CATGCATGCAGGGAGGCC 61.224 66.667 26.69 0.00 0.00 5.19
3200 6905 3.678289 ACACTAGAAACTCATGCATGCA 58.322 40.909 25.04 25.04 0.00 3.96
3232 6937 2.671963 GTGTTTCGGACAGCCCCC 60.672 66.667 0.00 0.00 39.39 5.40
3237 6942 1.425412 CTAACGGGTGTTTCGGACAG 58.575 55.000 0.00 0.00 39.39 3.51
3238 6943 0.600782 GCTAACGGGTGTTTCGGACA 60.601 55.000 0.00 0.00 39.54 4.02
3239 6944 0.600782 TGCTAACGGGTGTTTCGGAC 60.601 55.000 0.00 0.00 39.54 4.79
3259 6964 4.147449 TCGGAGCATCGGCAGTGG 62.147 66.667 0.00 0.00 44.61 4.00
3262 6967 1.153568 TTTCTCGGAGCATCGGCAG 60.154 57.895 0.00 0.00 44.61 4.85
3266 6971 3.693245 CGGTTTCTCGGAGCATCG 58.307 61.111 0.00 0.00 34.37 3.84
3275 6980 1.627297 ATGAGGAGGGCCGGTTTCTC 61.627 60.000 1.90 7.78 39.96 2.87
3278 7086 2.680370 GGATGAGGAGGGCCGGTTT 61.680 63.158 1.90 0.00 39.96 3.27
3324 7133 5.603596 ACGGTGATGTAGTAAAGACAACAA 58.396 37.500 0.00 0.00 32.25 2.83
3335 7144 2.565391 TCAATGTGGACGGTGATGTAGT 59.435 45.455 0.00 0.00 0.00 2.73
3341 7150 2.556189 CCAAAATCAATGTGGACGGTGA 59.444 45.455 0.00 0.00 34.05 4.02
3363 7172 0.249120 CAGACCGGATGCTGGTACAA 59.751 55.000 9.46 0.00 44.10 2.41
3394 7203 6.455647 TCCATCTAGTGTTGTAACTGAACTG 58.544 40.000 0.00 0.00 0.00 3.16
3395 7204 6.665992 TCCATCTAGTGTTGTAACTGAACT 57.334 37.500 0.00 0.00 0.00 3.01
3407 7216 1.341089 TGGACGAGCTCCATCTAGTGT 60.341 52.381 8.47 0.00 44.99 3.55
3435 7244 7.768582 ACATGTTCATTAGGAAATATCACGTCA 59.231 33.333 0.00 0.00 37.23 4.35
3501 7339 4.094646 ATGGTGGGCGCGATGTCA 62.095 61.111 12.10 0.47 0.00 3.58
3534 7372 6.580456 GGGACTAATGATCCAAACCTAAGGTT 60.580 42.308 0.00 0.00 39.15 3.50
3541 7379 6.154363 TCAAATTGGGACTAATGATCCAAACC 59.846 38.462 0.00 0.00 41.80 3.27
3560 7398 1.277842 GTCCCGGGCCAAAATCAAATT 59.722 47.619 18.49 0.00 0.00 1.82
3561 7399 0.901827 GTCCCGGGCCAAAATCAAAT 59.098 50.000 18.49 0.00 0.00 2.32
3570 7408 2.607568 TTGCATTAGTCCCGGGCCA 61.608 57.895 18.49 0.00 0.00 5.36
3586 7424 5.391950 CCGTTGGAATCAGAACTAATGGTTG 60.392 44.000 0.00 0.00 38.41 3.77
3598 7436 1.808133 GCTCCTAGCCGTTGGAATCAG 60.808 57.143 0.00 0.00 34.48 2.90
3599 7437 0.178068 GCTCCTAGCCGTTGGAATCA 59.822 55.000 0.00 0.00 34.48 2.57
3601 7439 1.144057 CGCTCCTAGCCGTTGGAAT 59.856 57.895 0.00 0.00 38.18 3.01
3605 7443 2.202756 GACCGCTCCTAGCCGTTG 60.203 66.667 0.00 0.00 38.18 4.10
3627 7465 1.331756 CGGGACTAATGATGCTTGTGC 59.668 52.381 0.00 0.00 40.20 4.57
3632 7470 4.630644 ATGAATCGGGACTAATGATGCT 57.369 40.909 0.00 0.00 0.00 3.79
3648 7486 9.936329 AATTGGGACTATAGGTACAAAATGAAT 57.064 29.630 4.43 0.00 31.76 2.57
3691 7529 2.044123 CCTGTCATCACCCCTTTAGC 57.956 55.000 0.00 0.00 0.00 3.09



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.