Multiple sequence alignment - TraesCS7A01G136400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G136400 chr7A 100.000 2639 0 0 1 2639 89036845 89034207 0.000000e+00 4874.0
1 TraesCS7A01G136400 chr7A 88.700 646 70 2 1002 1645 89043442 89042798 0.000000e+00 785.0
2 TraesCS7A01G136400 chr7A 86.003 643 69 14 218 842 89044093 89043454 0.000000e+00 669.0
3 TraesCS7A01G136400 chr7A 95.556 225 10 0 2415 2639 509559268 509559492 6.940000e-96 361.0
4 TraesCS7A01G136400 chr7A 91.566 249 19 1 2393 2639 642001922 642001674 2.520000e-90 342.0
5 TraesCS7A01G136400 chr7A 84.746 177 24 3 18 192 11381043 11380868 9.710000e-40 174.0
6 TraesCS7A01G136400 chr7D 88.649 881 65 13 18 874 87487158 87486289 0.000000e+00 1040.0
7 TraesCS7A01G136400 chr7D 87.926 646 75 2 1002 1645 87506206 87505562 0.000000e+00 758.0
8 TraesCS7A01G136400 chr7D 90.840 524 39 5 1353 1867 87486013 87485490 0.000000e+00 693.0
9 TraesCS7A01G136400 chr7D 85.160 593 74 9 214 793 87506863 87506272 1.750000e-166 595.0
10 TraesCS7A01G136400 chr7D 89.014 355 35 4 1884 2237 87485232 87484881 1.120000e-118 436.0
11 TraesCS7A01G136400 chr7D 88.679 265 19 6 934 1189 87486275 87486013 1.970000e-81 313.0
12 TraesCS7A01G136400 chr7D 84.571 175 25 2 19 192 617806995 617806822 3.490000e-39 172.0
13 TraesCS7A01G136400 chr7D 84.091 176 27 1 18 192 531593703 531593528 4.520000e-38 169.0
14 TraesCS7A01G136400 chr7B 87.443 884 76 18 18 883 36473740 36472874 0.000000e+00 985.0
15 TraesCS7A01G136400 chr7B 90.424 731 48 7 1147 1868 36469684 36468967 0.000000e+00 942.0
16 TraesCS7A01G136400 chr7B 88.602 658 72 3 990 1645 36490190 36489534 0.000000e+00 797.0
17 TraesCS7A01G136400 chr7B 85.900 617 71 10 198 800 36490931 36490317 0.000000e+00 643.0
18 TraesCS7A01G136400 chr7B 87.634 372 43 1 1872 2243 36468730 36468362 1.880000e-116 429.0
19 TraesCS7A01G136400 chr7B 88.261 230 18 4 934 1155 36472869 36472641 1.560000e-67 267.0
20 TraesCS7A01G136400 chr7B 85.393 178 21 5 18 192 600589750 600589925 2.090000e-41 180.0
21 TraesCS7A01G136400 chr7B 84.916 179 20 6 18 192 716533185 716533360 9.710000e-40 174.0
22 TraesCS7A01G136400 chr2D 97.696 217 5 0 2423 2639 63079489 63079273 8.920000e-100 374.0
23 TraesCS7A01G136400 chr2D 94.054 185 9 2 2241 2424 420801750 420801933 2.000000e-71 279.0
24 TraesCS7A01G136400 chr2D 94.054 185 10 1 2241 2424 501538036 501538220 2.000000e-71 279.0
25 TraesCS7A01G136400 chr2D 85.311 177 23 3 18 192 337236746 337236921 2.090000e-41 180.0
26 TraesCS7A01G136400 chr2D 83.616 177 25 4 18 192 645315043 645314869 2.100000e-36 163.0
27 TraesCS7A01G136400 chr6D 97.664 214 5 0 2426 2639 291258631 291258418 4.150000e-98 368.0
28 TraesCS7A01G136400 chr6D 96.364 220 8 0 2420 2639 409177602 409177821 1.930000e-96 363.0
29 TraesCS7A01G136400 chr6D 92.308 195 12 2 2231 2424 162727184 162727376 9.310000e-70 274.0
30 TraesCS7A01G136400 chr6D 84.181 177 25 3 18 192 36066807 36066982 4.520000e-38 169.0
31 TraesCS7A01G136400 chr6D 89.600 125 11 2 69 192 32241844 32241721 9.780000e-35 158.0
32 TraesCS7A01G136400 chr1D 97.235 217 6 0 2423 2639 205518409 205518625 4.150000e-98 368.0
33 TraesCS7A01G136400 chr1D 94.054 185 9 2 2241 2424 76416558 76416741 2.000000e-71 279.0
34 TraesCS7A01G136400 chr1D 94.022 184 9 2 2242 2424 159376751 159376569 7.190000e-71 278.0
35 TraesCS7A01G136400 chr1D 77.083 192 28 9 1 192 461386901 461387076 2.160000e-16 97.1
36 TraesCS7A01G136400 chr1D 95.238 42 2 0 151 192 421865010 421865051 1.700000e-07 67.6
37 TraesCS7A01G136400 chrUn 95.154 227 11 0 2413 2639 417360342 417360568 2.500000e-95 359.0
38 TraesCS7A01G136400 chrUn 79.661 177 22 5 18 192 2437060 2437224 5.970000e-22 115.0
39 TraesCS7A01G136400 chr5A 95.154 227 11 0 2413 2639 103187586 103187360 2.500000e-95 359.0
40 TraesCS7A01G136400 chr3B 95.154 227 11 0 2413 2639 160425976 160426202 2.500000e-95 359.0
41 TraesCS7A01G136400 chr3A 94.595 185 8 2 2241 2424 558544750 558544933 4.300000e-73 285.0
42 TraesCS7A01G136400 chr3A 84.270 178 24 4 18 192 743552648 743552824 1.260000e-38 171.0
43 TraesCS7A01G136400 chr3D 94.054 185 9 2 2241 2424 124559515 124559698 2.000000e-71 279.0
44 TraesCS7A01G136400 chr3D 85.311 177 21 5 19 192 30418729 30418555 7.510000e-41 178.0
45 TraesCS7A01G136400 chr3D 84.181 177 16 3 18 192 529787032 529787198 7.560000e-36 161.0
46 TraesCS7A01G136400 chr3D 81.356 177 27 6 18 192 615094671 615094499 3.540000e-29 139.0
47 TraesCS7A01G136400 chr3D 77.714 175 20 7 19 192 607320868 607320712 3.620000e-14 89.8
48 TraesCS7A01G136400 chr4D 93.194 191 9 4 2237 2424 398438161 398438350 7.190000e-71 278.0
49 TraesCS7A01G136400 chr1A 94.022 184 10 1 2242 2424 388169426 388169609 7.190000e-71 278.0
50 TraesCS7A01G136400 chr1A 83.616 177 25 4 18 192 526922483 526922657 2.100000e-36 163.0
51 TraesCS7A01G136400 chr1A 79.429 175 18 6 19 192 541655520 541655677 9.990000e-20 108.0
52 TraesCS7A01G136400 chr4A 84.181 177 25 3 18 192 602736134 602736309 4.520000e-38 169.0
53 TraesCS7A01G136400 chr2B 84.270 178 23 5 18 192 685568787 685568962 4.520000e-38 169.0
54 TraesCS7A01G136400 chr6A 83.051 177 26 4 18 192 4957748 4957574 9.780000e-35 158.0
55 TraesCS7A01G136400 chr6A 82.486 177 28 3 18 192 575465912 575465737 4.550000e-33 152.0
56 TraesCS7A01G136400 chr1B 83.648 159 24 2 36 192 670904988 670904830 5.890000e-32 148.0
57 TraesCS7A01G136400 chr5D 80.682 176 21 8 18 192 481419633 481419796 9.920000e-25 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G136400 chr7A 89034207 89036845 2638 True 4874.00 4874 100.0000 1 2639 1 chr7A.!!$R2 2638
1 TraesCS7A01G136400 chr7A 89042798 89044093 1295 True 727.00 785 87.3515 218 1645 2 chr7A.!!$R4 1427
2 TraesCS7A01G136400 chr7D 87505562 87506863 1301 True 676.50 758 86.5430 214 1645 2 chr7D.!!$R4 1431
3 TraesCS7A01G136400 chr7D 87484881 87487158 2277 True 620.50 1040 89.2955 18 2237 4 chr7D.!!$R3 2219
4 TraesCS7A01G136400 chr7B 36489534 36490931 1397 True 720.00 797 87.2510 198 1645 2 chr7B.!!$R2 1447
5 TraesCS7A01G136400 chr7B 36468362 36473740 5378 True 655.75 985 88.4405 18 2243 4 chr7B.!!$R1 2225

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
274 282 0.243095 GCCTTCTCTCCGTACAACGT 59.757 55.0 0.0 0.0 40.58 3.99 F
1118 1209 0.670546 ACGGTGATGAAGAAGGCACG 60.671 55.0 0.0 0.0 32.24 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1166 4222 0.100861 GAGTTTAGAGAGGTCGGCCG 59.899 60.0 22.12 22.12 40.5 6.13 R
2339 5665 0.032912 AGTCCATGCCATGCCAATCA 60.033 50.0 0.00 0.00 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
113 115 7.669722 TCAAGTGAATATTTCTACCTTTTGGCT 59.330 33.333 0.00 0.00 45.59 4.75
125 127 7.438564 TCTACCTTTTGGCTGAAATTTAAACC 58.561 34.615 0.00 0.00 45.59 3.27
131 133 7.414814 TTTGGCTGAAATTTAAACCGAAATC 57.585 32.000 0.00 0.00 0.00 2.17
132 134 6.090483 TGGCTGAAATTTAAACCGAAATCA 57.910 33.333 0.00 0.00 0.00 2.57
133 135 5.923684 TGGCTGAAATTTAAACCGAAATCAC 59.076 36.000 0.00 0.00 0.00 3.06
134 136 6.156519 GGCTGAAATTTAAACCGAAATCACT 58.843 36.000 0.00 0.00 0.00 3.41
135 137 7.040340 TGGCTGAAATTTAAACCGAAATCACTA 60.040 33.333 0.00 0.00 0.00 2.74
136 138 7.810759 GGCTGAAATTTAAACCGAAATCACTAA 59.189 33.333 0.00 0.00 0.00 2.24
137 139 9.187455 GCTGAAATTTAAACCGAAATCACTAAA 57.813 29.630 0.00 0.00 0.00 1.85
155 157 9.840427 ATCACTAAAATTTACTGAATTTCGGTG 57.160 29.630 19.03 15.35 44.98 4.94
162 164 6.788684 TTTACTGAATTTCGGTGATTTCGA 57.211 33.333 19.03 0.00 36.50 3.71
192 200 8.442384 GTGCTGAAATTTTTCTGAAACTGAAAA 58.558 29.630 12.42 10.72 38.71 2.29
204 212 6.204882 TCTGAAACTGAAAACCTAAAGCTAGC 59.795 38.462 6.62 6.62 0.00 3.42
221 229 3.251972 GCTAGCAGTATTGAATTCCAGGC 59.748 47.826 10.63 0.00 0.00 4.85
242 250 1.597663 GCGAAATTGATGACCTACGGG 59.402 52.381 0.00 0.00 38.88 5.28
274 282 0.243095 GCCTTCTCTCCGTACAACGT 59.757 55.000 0.00 0.00 40.58 3.99
291 299 3.989787 TGAGCTGGCGCGAGTTGA 61.990 61.111 20.92 6.27 42.32 3.18
292 300 2.510238 GAGCTGGCGCGAGTTGAT 60.510 61.111 20.92 4.87 42.32 2.57
294 302 3.567797 GCTGGCGCGAGTTGATCC 61.568 66.667 20.92 0.00 0.00 3.36
296 304 1.741401 CTGGCGCGAGTTGATCCAA 60.741 57.895 12.10 0.00 0.00 3.53
297 305 1.078497 TGGCGCGAGTTGATCCAAT 60.078 52.632 12.10 0.00 0.00 3.16
298 306 1.089481 TGGCGCGAGTTGATCCAATC 61.089 55.000 12.10 0.00 0.00 2.67
299 307 0.811616 GGCGCGAGTTGATCCAATCT 60.812 55.000 12.10 0.00 0.00 2.40
362 373 0.969894 ACGCACTAGAAGCTCAGGTT 59.030 50.000 0.00 0.00 0.00 3.50
369 380 1.004440 GAAGCTCAGGTTGGCGAGT 60.004 57.895 0.00 0.00 0.00 4.18
551 571 3.452786 CTCTCCGCCTTCTCCGCA 61.453 66.667 0.00 0.00 0.00 5.69
620 640 2.844839 GGGCTGGAGAGGCGGTAT 60.845 66.667 0.00 0.00 45.92 2.73
623 643 1.403687 GGCTGGAGAGGCGGTATCTT 61.404 60.000 0.00 0.00 34.60 2.40
800 846 7.416551 GCTCTTCTAGGGGTACTAACTAAACTG 60.417 44.444 0.00 0.00 0.00 3.16
820 866 3.216800 TGTGAAGCTTCTCAACTGCATT 58.783 40.909 24.84 0.00 0.00 3.56
874 920 6.721571 ATAAGTGTGGTTGATTTCGTACAG 57.278 37.500 0.00 0.00 0.00 2.74
875 921 4.067972 AGTGTGGTTGATTTCGTACAGT 57.932 40.909 0.00 0.00 0.00 3.55
884 930 9.275398 TGGTTGATTTCGTACAGTTTTATACTT 57.725 29.630 0.00 0.00 33.85 2.24
891 937 5.039333 CGTACAGTTTTATACTTCCTCCGG 58.961 45.833 0.00 0.00 33.85 5.14
895 941 6.171213 ACAGTTTTATACTTCCTCCGGAAAG 58.829 40.000 13.32 13.32 41.54 2.62
896 942 6.013984 ACAGTTTTATACTTCCTCCGGAAAGA 60.014 38.462 20.33 10.95 41.54 2.52
907 953 7.125963 ACTTCCTCCGGAAAGAAATATAAGAGT 59.874 37.037 20.33 8.46 41.54 3.24
908 954 6.817184 TCCTCCGGAAAGAAATATAAGAGTG 58.183 40.000 5.23 0.00 0.00 3.51
912 958 8.488651 TCCGGAAAGAAATATAAGAGTGTTTC 57.511 34.615 0.00 0.00 0.00 2.78
928 1011 5.536260 AGTGTTTCTTTACGGAAGGAGTAC 58.464 41.667 0.00 0.00 35.98 2.73
929 1012 5.303845 AGTGTTTCTTTACGGAAGGAGTACT 59.696 40.000 0.00 0.00 35.98 2.73
930 1013 5.404667 GTGTTTCTTTACGGAAGGAGTACTG 59.595 44.000 0.00 0.00 35.98 2.74
931 1014 5.302568 TGTTTCTTTACGGAAGGAGTACTGA 59.697 40.000 0.00 0.00 35.98 3.41
932 1015 6.183360 TGTTTCTTTACGGAAGGAGTACTGAA 60.183 38.462 0.00 0.00 35.98 3.02
953 1036 9.661563 ACTGAATTTATACTAAATCGGTGACAA 57.338 29.630 0.00 0.00 0.00 3.18
966 1049 4.658063 TCGGTGACAATTATTTTGGGACT 58.342 39.130 0.00 0.00 0.00 3.85
975 1058 6.155049 ACAATTATTTTGGGACTGAGGGAATG 59.845 38.462 0.00 0.00 0.00 2.67
983 1067 5.459505 TGGGACTGAGGGAATGTTTTTAAA 58.540 37.500 0.00 0.00 0.00 1.52
1038 1129 3.921119 TTGATGGATGCATTTATCGGC 57.079 42.857 0.00 0.00 0.00 5.54
1118 1209 0.670546 ACGGTGATGAAGAAGGCACG 60.671 55.000 0.00 0.00 32.24 5.34
1131 1222 0.687757 AGGCACGGGCAGAGATAAGA 60.688 55.000 13.89 0.00 43.71 2.10
1162 4218 1.336887 GCGGCAAACAGAGACTAGTGA 60.337 52.381 0.00 0.00 0.00 3.41
1166 4222 2.739379 GCAAACAGAGACTAGTGAAGGC 59.261 50.000 0.00 0.00 0.00 4.35
1167 4223 2.989840 CAAACAGAGACTAGTGAAGGCG 59.010 50.000 0.00 0.00 38.81 5.52
1169 4225 0.179124 CAGAGACTAGTGAAGGCGGC 60.179 60.000 0.00 0.00 38.81 6.53
1224 4280 2.091112 CAAGGAGACGCTGCGACTG 61.091 63.158 29.40 13.49 31.69 3.51
1383 4439 2.042706 AGAGGAGTTTTACCCGGAGAGA 59.957 50.000 0.73 0.00 0.00 3.10
1529 4585 0.523072 CTGCATTCGTTTGACTGGGG 59.477 55.000 0.00 0.00 0.00 4.96
1698 4766 6.968263 TCAAATTTTACATCACCAAGACCA 57.032 33.333 0.00 0.00 0.00 4.02
1766 4844 5.698832 TGCTTCACATGTAAAATAGTGCAC 58.301 37.500 9.40 9.40 32.25 4.57
1796 4878 0.823356 AACTTTGCATCACCACGCCT 60.823 50.000 0.00 0.00 0.00 5.52
1805 4887 0.537143 TCACCACGCCTGAGCAAAAT 60.537 50.000 0.00 0.00 39.83 1.82
1828 4910 4.805231 CGGTCGCGTGCATACCCA 62.805 66.667 5.77 0.00 0.00 4.51
1835 4917 1.234615 GCGTGCATACCCACAACTGT 61.235 55.000 0.00 0.00 35.47 3.55
1880 5206 2.887568 GCCGCTGATGACACCTCG 60.888 66.667 0.00 0.00 0.00 4.63
1882 5208 2.887568 CGCTGATGACACCTCGGC 60.888 66.667 0.46 0.46 40.82 5.54
1886 5212 2.202756 GATGACACCTCGGCCGTC 60.203 66.667 27.15 15.67 0.00 4.79
1887 5213 3.718210 GATGACACCTCGGCCGTCC 62.718 68.421 27.15 9.40 0.00 4.79
1888 5214 4.988716 TGACACCTCGGCCGTCCT 62.989 66.667 27.15 5.09 0.00 3.85
1889 5215 4.131088 GACACCTCGGCCGTCCTC 62.131 72.222 27.15 9.97 0.00 3.71
1926 5252 3.249189 TTCCAGCAGCGGAAGGGT 61.249 61.111 12.88 0.00 40.20 4.34
1927 5253 3.551496 TTCCAGCAGCGGAAGGGTG 62.551 63.158 12.88 0.00 46.88 4.61
1955 5281 1.503542 GTGGCAGAACTGATTGGCG 59.496 57.895 5.97 0.00 42.25 5.69
1956 5282 2.334946 TGGCAGAACTGATTGGCGC 61.335 57.895 0.00 0.00 42.25 6.53
1957 5283 2.042831 GGCAGAACTGATTGGCGCT 61.043 57.895 7.64 0.00 0.00 5.92
2006 5332 3.446570 GCCTTCGCTGCTTGGCAT 61.447 61.111 17.92 0.00 44.34 4.40
2035 5361 4.293648 CGTGTCGTCCTGGTGGCA 62.294 66.667 0.00 0.00 0.00 4.92
2152 5478 2.029020 TGAAGAGTTGGTCACTGATCCG 60.029 50.000 0.00 0.00 35.01 4.18
2157 5483 0.544357 TTGGTCACTGATCCGGTCCT 60.544 55.000 0.00 0.00 0.00 3.85
2159 5485 1.517832 GTCACTGATCCGGTCCTGG 59.482 63.158 0.00 0.00 0.00 4.45
2161 5487 2.284625 ACTGATCCGGTCCTGGCA 60.285 61.111 0.00 0.00 0.00 4.92
2163 5489 1.274703 ACTGATCCGGTCCTGGCATT 61.275 55.000 0.00 0.00 0.00 3.56
2176 5502 0.257328 TGGCATTGGGCGGAAATCTA 59.743 50.000 0.00 0.00 46.16 1.98
2223 5549 2.504274 AAGGCCAACACGAGGTCGA 61.504 57.895 5.01 0.00 43.02 4.20
2232 5558 0.031585 CACGAGGTCGAGGTGTTGAA 59.968 55.000 6.35 0.00 43.02 2.69
2237 5563 0.666577 GGTCGAGGTGTTGAAGACCG 60.667 60.000 5.81 0.00 41.38 4.79
2240 5566 0.249741 CGAGGTGTTGAAGACCGGTT 60.250 55.000 9.42 0.00 38.64 4.44
2243 5569 1.210967 AGGTGTTGAAGACCGGTTTGA 59.789 47.619 9.42 0.00 38.64 2.69
2244 5570 2.018515 GGTGTTGAAGACCGGTTTGAA 58.981 47.619 9.42 2.80 0.00 2.69
2245 5571 2.424246 GGTGTTGAAGACCGGTTTGAAA 59.576 45.455 9.42 0.00 0.00 2.69
2246 5572 3.488553 GGTGTTGAAGACCGGTTTGAAAG 60.489 47.826 9.42 0.00 0.00 2.62
2247 5573 2.685897 TGTTGAAGACCGGTTTGAAAGG 59.314 45.455 9.42 0.00 0.00 3.11
2248 5574 1.314730 TGAAGACCGGTTTGAAAGGC 58.685 50.000 9.42 0.00 0.00 4.35
2249 5575 1.314730 GAAGACCGGTTTGAAAGGCA 58.685 50.000 9.42 0.00 0.00 4.75
2250 5576 1.679153 GAAGACCGGTTTGAAAGGCAA 59.321 47.619 9.42 0.00 33.88 4.52
2251 5577 1.029681 AGACCGGTTTGAAAGGCAAC 58.970 50.000 9.42 0.00 35.91 4.17
2268 5594 4.844884 GGCAACTAATCCCTGAGTAGTTT 58.155 43.478 12.66 0.00 46.53 2.66
2269 5595 5.254115 GGCAACTAATCCCTGAGTAGTTTT 58.746 41.667 12.66 0.00 46.53 2.43
2270 5596 5.123979 GGCAACTAATCCCTGAGTAGTTTTG 59.876 44.000 12.66 6.62 46.53 2.44
2271 5597 5.123979 GCAACTAATCCCTGAGTAGTTTTGG 59.876 44.000 12.66 5.47 46.53 3.28
2272 5598 6.238648 CAACTAATCCCTGAGTAGTTTTGGT 58.761 40.000 12.66 0.00 46.53 3.67
2273 5599 7.391620 CAACTAATCCCTGAGTAGTTTTGGTA 58.608 38.462 12.66 0.00 46.53 3.25
2274 5600 7.563724 ACTAATCCCTGAGTAGTTTTGGTAA 57.436 36.000 0.00 0.00 39.88 2.85
2275 5601 8.159229 ACTAATCCCTGAGTAGTTTTGGTAAT 57.841 34.615 0.00 0.00 39.88 1.89
2276 5602 8.612145 ACTAATCCCTGAGTAGTTTTGGTAATT 58.388 33.333 0.00 0.00 39.88 1.40
2277 5603 7.939784 AATCCCTGAGTAGTTTTGGTAATTC 57.060 36.000 0.00 0.00 0.00 2.17
2278 5604 6.697641 TCCCTGAGTAGTTTTGGTAATTCT 57.302 37.500 0.00 0.00 0.00 2.40
2279 5605 7.086685 TCCCTGAGTAGTTTTGGTAATTCTT 57.913 36.000 0.00 0.00 0.00 2.52
2280 5606 8.209802 TCCCTGAGTAGTTTTGGTAATTCTTA 57.790 34.615 0.00 0.00 0.00 2.10
2281 5607 8.662255 TCCCTGAGTAGTTTTGGTAATTCTTAA 58.338 33.333 0.00 0.00 0.00 1.85
2282 5608 8.727910 CCCTGAGTAGTTTTGGTAATTCTTAAC 58.272 37.037 0.00 0.00 0.00 2.01
2283 5609 9.280174 CCTGAGTAGTTTTGGTAATTCTTAACA 57.720 33.333 0.00 0.00 0.00 2.41
2314 5640 9.842775 ATAGCTCAATGAACTGATATTCTTTCA 57.157 29.630 0.00 0.00 32.71 2.69
2315 5641 8.571461 AGCTCAATGAACTGATATTCTTTCAA 57.429 30.769 0.00 0.00 31.96 2.69
2316 5642 8.675504 AGCTCAATGAACTGATATTCTTTCAAG 58.324 33.333 0.00 0.00 31.96 3.02
2317 5643 8.671921 GCTCAATGAACTGATATTCTTTCAAGA 58.328 33.333 0.00 0.00 31.96 3.02
2345 5671 9.865321 AATCATTTCAGAAAGTACAATGATTGG 57.135 29.630 19.34 0.00 45.96 3.16
2346 5672 7.315142 TCATTTCAGAAAGTACAATGATTGGC 58.685 34.615 10.27 2.22 30.60 4.52
2347 5673 6.647334 TTTCAGAAAGTACAATGATTGGCA 57.353 33.333 10.27 0.00 34.12 4.92
2348 5674 6.839124 TTCAGAAAGTACAATGATTGGCAT 57.161 33.333 10.27 0.00 39.43 4.40
2349 5675 6.198650 TCAGAAAGTACAATGATTGGCATG 57.801 37.500 10.27 0.00 37.28 4.06
2350 5676 5.125900 TCAGAAAGTACAATGATTGGCATGG 59.874 40.000 10.27 0.00 37.28 3.66
2351 5677 3.806625 AAGTACAATGATTGGCATGGC 57.193 42.857 13.29 13.29 37.28 4.40
2352 5678 2.737544 AGTACAATGATTGGCATGGCA 58.262 42.857 19.43 19.43 37.28 4.92
2353 5679 3.302161 AGTACAATGATTGGCATGGCAT 58.698 40.909 23.96 12.99 37.28 4.40
2354 5680 2.613026 ACAATGATTGGCATGGCATG 57.387 45.000 23.96 22.99 37.28 4.06
2355 5681 1.140052 ACAATGATTGGCATGGCATGG 59.860 47.619 27.48 8.15 37.28 3.66
2356 5682 1.414550 CAATGATTGGCATGGCATGGA 59.585 47.619 27.48 8.86 37.28 3.41
2357 5683 1.045407 ATGATTGGCATGGCATGGAC 58.955 50.000 27.48 12.58 35.42 4.02
2358 5684 0.032912 TGATTGGCATGGCATGGACT 60.033 50.000 27.48 5.69 0.00 3.85
2359 5685 1.214923 TGATTGGCATGGCATGGACTA 59.785 47.619 27.48 7.20 0.00 2.59
2360 5686 2.309613 GATTGGCATGGCATGGACTAA 58.690 47.619 27.48 16.23 0.00 2.24
2361 5687 2.228545 TTGGCATGGCATGGACTAAA 57.771 45.000 27.48 1.89 0.00 1.85
2362 5688 1.766494 TGGCATGGCATGGACTAAAG 58.234 50.000 27.48 1.12 0.00 1.85
2363 5689 1.035139 GGCATGGCATGGACTAAAGG 58.965 55.000 27.48 0.36 0.00 3.11
2364 5690 1.410083 GGCATGGCATGGACTAAAGGA 60.410 52.381 27.48 0.00 0.00 3.36
2365 5691 2.590821 GCATGGCATGGACTAAAGGAT 58.409 47.619 27.48 0.00 0.00 3.24
2366 5692 2.295349 GCATGGCATGGACTAAAGGATG 59.705 50.000 27.48 0.38 0.00 3.51
2367 5693 3.559069 CATGGCATGGACTAAAGGATGT 58.441 45.455 19.80 0.00 0.00 3.06
2368 5694 3.003394 TGGCATGGACTAAAGGATGTG 57.997 47.619 0.00 0.00 0.00 3.21
2369 5695 2.301346 GGCATGGACTAAAGGATGTGG 58.699 52.381 0.00 0.00 0.00 4.17
2370 5696 2.092429 GGCATGGACTAAAGGATGTGGA 60.092 50.000 0.00 0.00 0.00 4.02
2371 5697 2.945668 GCATGGACTAAAGGATGTGGAC 59.054 50.000 0.00 0.00 0.00 4.02
2372 5698 3.545703 CATGGACTAAAGGATGTGGACC 58.454 50.000 0.00 0.00 0.00 4.46
2373 5699 1.913419 TGGACTAAAGGATGTGGACCC 59.087 52.381 0.00 0.00 0.00 4.46
2374 5700 1.212195 GGACTAAAGGATGTGGACCCC 59.788 57.143 0.00 0.00 0.00 4.95
2375 5701 2.197465 GACTAAAGGATGTGGACCCCT 58.803 52.381 0.00 0.00 0.00 4.79
2376 5702 2.170817 GACTAAAGGATGTGGACCCCTC 59.829 54.545 0.00 0.00 0.00 4.30
2377 5703 2.196595 CTAAAGGATGTGGACCCCTCA 58.803 52.381 0.00 0.00 0.00 3.86
2378 5704 1.455822 AAAGGATGTGGACCCCTCAA 58.544 50.000 0.00 0.00 30.64 3.02
2379 5705 1.455822 AAGGATGTGGACCCCTCAAA 58.544 50.000 0.00 0.00 30.64 2.69
2380 5706 1.455822 AGGATGTGGACCCCTCAAAA 58.544 50.000 0.00 0.00 30.64 2.44
2381 5707 2.003072 AGGATGTGGACCCCTCAAAAT 58.997 47.619 0.00 0.00 30.64 1.82
2382 5708 2.102578 GGATGTGGACCCCTCAAAATG 58.897 52.381 0.00 0.00 30.64 2.32
2383 5709 1.478105 GATGTGGACCCCTCAAAATGC 59.522 52.381 0.00 0.00 30.64 3.56
2384 5710 0.482446 TGTGGACCCCTCAAAATGCT 59.518 50.000 0.00 0.00 0.00 3.79
2385 5711 1.707989 TGTGGACCCCTCAAAATGCTA 59.292 47.619 0.00 0.00 0.00 3.49
2386 5712 2.109128 TGTGGACCCCTCAAAATGCTAA 59.891 45.455 0.00 0.00 0.00 3.09
2387 5713 2.755103 GTGGACCCCTCAAAATGCTAAG 59.245 50.000 0.00 0.00 0.00 2.18
2388 5714 2.291540 TGGACCCCTCAAAATGCTAAGG 60.292 50.000 0.00 0.00 0.00 2.69
2389 5715 2.025321 GGACCCCTCAAAATGCTAAGGA 60.025 50.000 0.00 0.00 0.00 3.36
2390 5716 3.017442 GACCCCTCAAAATGCTAAGGAC 58.983 50.000 0.00 0.00 0.00 3.85
2391 5717 2.378547 ACCCCTCAAAATGCTAAGGACA 59.621 45.455 0.00 0.00 0.00 4.02
2392 5718 2.755103 CCCCTCAAAATGCTAAGGACAC 59.245 50.000 0.00 0.00 0.00 3.67
2393 5719 3.420893 CCCTCAAAATGCTAAGGACACA 58.579 45.455 0.00 0.00 0.00 3.72
2394 5720 4.019174 CCCTCAAAATGCTAAGGACACAT 58.981 43.478 0.00 0.00 0.00 3.21
2395 5721 5.192927 CCCTCAAAATGCTAAGGACACATA 58.807 41.667 0.00 0.00 0.00 2.29
2396 5722 5.829924 CCCTCAAAATGCTAAGGACACATAT 59.170 40.000 0.00 0.00 0.00 1.78
2397 5723 6.322201 CCCTCAAAATGCTAAGGACACATATT 59.678 38.462 0.00 0.00 0.00 1.28
2398 5724 7.198390 CCTCAAAATGCTAAGGACACATATTG 58.802 38.462 0.00 0.00 0.00 1.90
2399 5725 7.099266 TCAAAATGCTAAGGACACATATTGG 57.901 36.000 0.00 0.00 0.00 3.16
2400 5726 5.520376 AAATGCTAAGGACACATATTGGC 57.480 39.130 0.00 0.00 0.00 4.52
2401 5727 3.643199 TGCTAAGGACACATATTGGCA 57.357 42.857 0.00 0.00 37.97 4.92
2402 5728 3.961849 TGCTAAGGACACATATTGGCAA 58.038 40.909 0.68 0.68 37.46 4.52
2403 5729 4.339748 TGCTAAGGACACATATTGGCAAA 58.660 39.130 3.01 0.00 37.46 3.68
2404 5730 4.769488 TGCTAAGGACACATATTGGCAAAA 59.231 37.500 3.01 0.00 37.46 2.44
2405 5731 5.105797 TGCTAAGGACACATATTGGCAAAAG 60.106 40.000 3.01 0.00 37.46 2.27
2406 5732 3.874392 AGGACACATATTGGCAAAAGC 57.126 42.857 3.01 0.00 32.99 3.51
2407 5733 3.434309 AGGACACATATTGGCAAAAGCT 58.566 40.909 3.01 0.00 32.99 3.74
2408 5734 3.445096 AGGACACATATTGGCAAAAGCTC 59.555 43.478 3.01 0.00 32.99 4.09
2409 5735 3.429085 GACACATATTGGCAAAAGCTCG 58.571 45.455 3.01 0.00 30.77 5.03
2410 5736 3.081061 ACACATATTGGCAAAAGCTCGA 58.919 40.909 3.01 0.00 0.00 4.04
2411 5737 3.127548 ACACATATTGGCAAAAGCTCGAG 59.872 43.478 8.45 8.45 0.00 4.04
2412 5738 3.374988 CACATATTGGCAAAAGCTCGAGA 59.625 43.478 18.75 0.00 0.00 4.04
2413 5739 3.375299 ACATATTGGCAAAAGCTCGAGAC 59.625 43.478 18.75 7.74 0.00 3.36
2414 5740 2.191128 ATTGGCAAAAGCTCGAGACT 57.809 45.000 18.75 10.18 0.00 3.24
2415 5741 1.512926 TTGGCAAAAGCTCGAGACTC 58.487 50.000 18.75 0.00 0.00 3.36
2416 5742 0.681733 TGGCAAAAGCTCGAGACTCT 59.318 50.000 18.75 0.00 0.00 3.24
2417 5743 1.893137 TGGCAAAAGCTCGAGACTCTA 59.107 47.619 18.75 0.00 0.00 2.43
2418 5744 2.263945 GGCAAAAGCTCGAGACTCTAC 58.736 52.381 18.75 0.13 0.00 2.59
2419 5745 2.352814 GGCAAAAGCTCGAGACTCTACA 60.353 50.000 18.75 0.00 0.00 2.74
2420 5746 3.516615 GCAAAAGCTCGAGACTCTACAT 58.483 45.455 18.75 0.00 0.00 2.29
2421 5747 3.929610 GCAAAAGCTCGAGACTCTACATT 59.070 43.478 18.75 1.09 0.00 2.71
2422 5748 4.390297 GCAAAAGCTCGAGACTCTACATTT 59.610 41.667 18.75 7.06 0.00 2.32
2423 5749 5.106908 GCAAAAGCTCGAGACTCTACATTTT 60.107 40.000 18.75 6.41 0.00 1.82
2424 5750 6.302615 CAAAAGCTCGAGACTCTACATTTTG 58.697 40.000 18.75 13.78 0.00 2.44
2425 5751 4.792521 AGCTCGAGACTCTACATTTTGT 57.207 40.909 18.75 0.00 0.00 2.83
2426 5752 4.489810 AGCTCGAGACTCTACATTTTGTG 58.510 43.478 18.75 0.00 0.00 3.33
2427 5753 4.218635 AGCTCGAGACTCTACATTTTGTGA 59.781 41.667 18.75 0.00 0.00 3.58
2428 5754 4.923871 GCTCGAGACTCTACATTTTGTGAA 59.076 41.667 18.75 0.00 0.00 3.18
2429 5755 5.164041 GCTCGAGACTCTACATTTTGTGAAC 60.164 44.000 18.75 0.00 0.00 3.18
2430 5756 4.915667 TCGAGACTCTACATTTTGTGAACG 59.084 41.667 0.03 0.00 0.00 3.95
2431 5757 4.680110 CGAGACTCTACATTTTGTGAACGT 59.320 41.667 0.03 0.00 0.00 3.99
2432 5758 5.164177 CGAGACTCTACATTTTGTGAACGTC 60.164 44.000 0.03 0.00 0.00 4.34
2433 5759 5.844004 AGACTCTACATTTTGTGAACGTCT 58.156 37.500 0.00 0.00 0.00 4.18
2434 5760 5.692204 AGACTCTACATTTTGTGAACGTCTG 59.308 40.000 0.00 0.00 0.00 3.51
2435 5761 4.750098 ACTCTACATTTTGTGAACGTCTGG 59.250 41.667 0.00 0.00 0.00 3.86
2436 5762 2.774439 ACATTTTGTGAACGTCTGGC 57.226 45.000 0.00 0.00 0.00 4.85
2437 5763 2.020720 ACATTTTGTGAACGTCTGGCA 58.979 42.857 0.00 0.00 0.00 4.92
2438 5764 2.033299 ACATTTTGTGAACGTCTGGCAG 59.967 45.455 8.58 8.58 0.00 4.85
2439 5765 2.031258 TTTTGTGAACGTCTGGCAGA 57.969 45.000 14.43 14.43 0.00 4.26
2440 5766 1.581934 TTTGTGAACGTCTGGCAGAG 58.418 50.000 19.38 14.26 0.00 3.35
2441 5767 0.880278 TTGTGAACGTCTGGCAGAGC 60.880 55.000 19.38 11.86 0.00 4.09
2442 5768 1.300931 GTGAACGTCTGGCAGAGCA 60.301 57.895 19.38 11.03 0.00 4.26
2443 5769 0.880278 GTGAACGTCTGGCAGAGCAA 60.880 55.000 19.38 0.00 0.00 3.91
2444 5770 0.179059 TGAACGTCTGGCAGAGCAAA 60.179 50.000 19.38 0.00 0.00 3.68
2445 5771 0.514691 GAACGTCTGGCAGAGCAAAG 59.485 55.000 19.38 9.60 0.00 2.77
2446 5772 1.510480 AACGTCTGGCAGAGCAAAGC 61.510 55.000 19.38 3.79 0.00 3.51
2447 5773 1.670406 CGTCTGGCAGAGCAAAGCT 60.670 57.895 19.38 0.00 43.88 3.74
2448 5774 1.874562 GTCTGGCAGAGCAAAGCTG 59.125 57.895 19.38 0.00 39.88 4.24
2449 5775 0.604780 GTCTGGCAGAGCAAAGCTGA 60.605 55.000 19.38 0.00 39.88 4.26
2450 5776 0.327259 TCTGGCAGAGCAAAGCTGAT 59.673 50.000 14.43 0.00 39.88 2.90
2451 5777 0.452184 CTGGCAGAGCAAAGCTGATG 59.548 55.000 9.42 0.00 39.88 3.07
2452 5778 0.037160 TGGCAGAGCAAAGCTGATGA 59.963 50.000 0.00 0.00 39.88 2.92
2453 5779 0.450983 GGCAGAGCAAAGCTGATGAC 59.549 55.000 0.00 0.00 39.88 3.06
2454 5780 1.451067 GCAGAGCAAAGCTGATGACT 58.549 50.000 0.00 1.20 39.88 3.41
2455 5781 2.625737 GCAGAGCAAAGCTGATGACTA 58.374 47.619 0.00 0.00 39.88 2.59
2456 5782 2.351111 GCAGAGCAAAGCTGATGACTAC 59.649 50.000 0.00 0.00 39.88 2.73
2457 5783 3.859443 CAGAGCAAAGCTGATGACTACT 58.141 45.455 0.00 0.00 39.88 2.57
2458 5784 3.864583 CAGAGCAAAGCTGATGACTACTC 59.135 47.826 0.00 1.65 39.88 2.59
2459 5785 2.857152 GAGCAAAGCTGATGACTACTCG 59.143 50.000 0.00 0.00 39.88 4.18
2460 5786 2.493675 AGCAAAGCTGATGACTACTCGA 59.506 45.455 4.04 0.00 37.57 4.04
2461 5787 3.131933 AGCAAAGCTGATGACTACTCGAT 59.868 43.478 4.04 0.00 37.57 3.59
2462 5788 4.339530 AGCAAAGCTGATGACTACTCGATA 59.660 41.667 4.04 0.00 37.57 2.92
2463 5789 4.679197 GCAAAGCTGATGACTACTCGATAG 59.321 45.833 4.04 0.00 36.89 2.08
2464 5790 7.854204 AGCAAAGCTGATGACTACTCGATAGT 61.854 42.308 4.04 7.09 41.68 2.12
2465 5791 6.269315 CAAAGCTGATGACTACTCGATAGTT 58.731 40.000 8.34 0.00 44.64 2.24
2466 5792 5.682943 AGCTGATGACTACTCGATAGTTC 57.317 43.478 8.34 5.11 44.64 3.01
2467 5793 5.126779 AGCTGATGACTACTCGATAGTTCA 58.873 41.667 8.34 8.21 44.64 3.18
2468 5794 5.238432 AGCTGATGACTACTCGATAGTTCAG 59.762 44.000 19.46 19.46 44.64 3.02
2469 5795 5.008217 GCTGATGACTACTCGATAGTTCAGT 59.992 44.000 21.73 8.31 44.17 3.41
2470 5796 6.364945 TGATGACTACTCGATAGTTCAGTG 57.635 41.667 8.34 0.00 44.64 3.66
2471 5797 5.880887 TGATGACTACTCGATAGTTCAGTGT 59.119 40.000 8.34 0.00 44.64 3.55
2472 5798 5.547181 TGACTACTCGATAGTTCAGTGTG 57.453 43.478 8.34 0.00 44.64 3.82
2473 5799 5.001874 TGACTACTCGATAGTTCAGTGTGT 58.998 41.667 8.34 0.00 44.64 3.72
2474 5800 5.121925 TGACTACTCGATAGTTCAGTGTGTC 59.878 44.000 8.34 5.08 44.64 3.67
2475 5801 5.001874 ACTACTCGATAGTTCAGTGTGTCA 58.998 41.667 0.00 0.00 41.71 3.58
2476 5802 5.648526 ACTACTCGATAGTTCAGTGTGTCAT 59.351 40.000 0.00 0.00 41.71 3.06
2477 5803 4.738124 ACTCGATAGTTCAGTGTGTCATG 58.262 43.478 0.00 0.00 29.00 3.07
2478 5804 3.511699 TCGATAGTTCAGTGTGTCATGC 58.488 45.455 0.00 0.00 37.40 4.06
2479 5805 3.193479 TCGATAGTTCAGTGTGTCATGCT 59.807 43.478 0.00 0.00 37.40 3.79
2480 5806 3.928992 CGATAGTTCAGTGTGTCATGCTT 59.071 43.478 0.00 0.00 0.00 3.91
2481 5807 4.389992 CGATAGTTCAGTGTGTCATGCTTT 59.610 41.667 0.00 0.00 0.00 3.51
2482 5808 5.576774 CGATAGTTCAGTGTGTCATGCTTTA 59.423 40.000 0.00 0.00 0.00 1.85
2483 5809 6.454318 CGATAGTTCAGTGTGTCATGCTTTAC 60.454 42.308 0.00 0.00 0.00 2.01
2484 5810 3.494626 AGTTCAGTGTGTCATGCTTTACG 59.505 43.478 0.00 0.00 0.00 3.18
2485 5811 2.412870 TCAGTGTGTCATGCTTTACGG 58.587 47.619 0.00 0.00 0.00 4.02
2486 5812 1.135972 CAGTGTGTCATGCTTTACGGC 60.136 52.381 0.00 0.00 0.00 5.68
2487 5813 1.156736 GTGTGTCATGCTTTACGGCT 58.843 50.000 0.00 0.00 0.00 5.52
2488 5814 1.535462 GTGTGTCATGCTTTACGGCTT 59.465 47.619 0.00 0.00 0.00 4.35
2489 5815 2.739913 GTGTGTCATGCTTTACGGCTTA 59.260 45.455 0.00 0.00 0.00 3.09
2490 5816 3.000041 TGTGTCATGCTTTACGGCTTAG 59.000 45.455 0.00 0.00 0.00 2.18
2491 5817 3.259064 GTGTCATGCTTTACGGCTTAGA 58.741 45.455 0.00 0.00 0.00 2.10
2492 5818 3.682858 GTGTCATGCTTTACGGCTTAGAA 59.317 43.478 0.00 0.00 0.00 2.10
2493 5819 4.332819 GTGTCATGCTTTACGGCTTAGAAT 59.667 41.667 0.00 0.00 0.00 2.40
2494 5820 4.570772 TGTCATGCTTTACGGCTTAGAATC 59.429 41.667 0.00 0.00 0.00 2.52
2495 5821 3.802139 TCATGCTTTACGGCTTAGAATCG 59.198 43.478 0.00 0.00 0.00 3.34
2496 5822 2.546778 TGCTTTACGGCTTAGAATCGG 58.453 47.619 0.00 0.00 0.00 4.18
2497 5823 1.865340 GCTTTACGGCTTAGAATCGGG 59.135 52.381 0.00 0.00 0.00 5.14
2498 5824 2.482490 GCTTTACGGCTTAGAATCGGGA 60.482 50.000 0.00 0.00 0.00 5.14
2499 5825 2.877043 TTACGGCTTAGAATCGGGAC 57.123 50.000 0.00 0.00 0.00 4.46
2500 5826 2.062971 TACGGCTTAGAATCGGGACT 57.937 50.000 0.00 0.00 0.00 3.85
2501 5827 1.192428 ACGGCTTAGAATCGGGACTT 58.808 50.000 0.00 0.00 0.00 3.01
2502 5828 1.136500 ACGGCTTAGAATCGGGACTTC 59.864 52.381 0.00 0.00 0.00 3.01
2503 5829 1.136305 CGGCTTAGAATCGGGACTTCA 59.864 52.381 0.00 0.00 0.00 3.02
2504 5830 2.418197 CGGCTTAGAATCGGGACTTCAA 60.418 50.000 0.00 0.00 0.00 2.69
2505 5831 3.606687 GGCTTAGAATCGGGACTTCAAA 58.393 45.455 0.00 0.00 0.00 2.69
2506 5832 3.623510 GGCTTAGAATCGGGACTTCAAAG 59.376 47.826 0.00 0.00 0.00 2.77
2507 5833 4.504858 GCTTAGAATCGGGACTTCAAAGA 58.495 43.478 0.00 0.00 0.00 2.52
2508 5834 4.330347 GCTTAGAATCGGGACTTCAAAGAC 59.670 45.833 0.00 0.00 0.00 3.01
2509 5835 3.336138 AGAATCGGGACTTCAAAGACC 57.664 47.619 3.08 3.08 39.63 3.85
2510 5836 2.907042 AGAATCGGGACTTCAAAGACCT 59.093 45.455 10.35 0.00 40.13 3.85
2511 5837 3.328050 AGAATCGGGACTTCAAAGACCTT 59.672 43.478 10.35 0.00 40.13 3.50
2512 5838 3.790089 ATCGGGACTTCAAAGACCTTT 57.210 42.857 10.35 0.00 40.13 3.11
2513 5839 3.570912 TCGGGACTTCAAAGACCTTTT 57.429 42.857 10.35 0.00 40.13 2.27
2514 5840 3.211045 TCGGGACTTCAAAGACCTTTTG 58.789 45.455 10.35 0.00 40.13 2.44
2515 5841 3.118186 TCGGGACTTCAAAGACCTTTTGA 60.118 43.478 10.35 0.00 40.13 2.69
2516 5842 3.630312 CGGGACTTCAAAGACCTTTTGAA 59.370 43.478 12.77 12.77 43.62 2.69
2517 5843 4.497507 CGGGACTTCAAAGACCTTTTGAAC 60.498 45.833 10.14 3.66 41.74 3.18
2518 5844 4.401202 GGGACTTCAAAGACCTTTTGAACA 59.599 41.667 10.14 0.00 41.74 3.18
2519 5845 5.069119 GGGACTTCAAAGACCTTTTGAACAT 59.931 40.000 10.14 3.50 41.74 2.71
2520 5846 6.209361 GGACTTCAAAGACCTTTTGAACATC 58.791 40.000 10.14 10.36 41.74 3.06
2521 5847 6.183360 GGACTTCAAAGACCTTTTGAACATCA 60.183 38.462 10.14 0.00 41.74 3.07
2522 5848 7.352079 ACTTCAAAGACCTTTTGAACATCAT 57.648 32.000 10.14 0.00 41.74 2.45
2523 5849 7.205297 ACTTCAAAGACCTTTTGAACATCATG 58.795 34.615 10.14 4.13 41.74 3.07
2524 5850 6.088016 TCAAAGACCTTTTGAACATCATGG 57.912 37.500 0.19 0.00 35.69 3.66
2525 5851 5.832595 TCAAAGACCTTTTGAACATCATGGA 59.167 36.000 0.19 0.00 35.69 3.41
2526 5852 5.972107 AAGACCTTTTGAACATCATGGAG 57.028 39.130 0.00 0.00 0.00 3.86
2527 5853 3.760684 AGACCTTTTGAACATCATGGAGC 59.239 43.478 0.00 0.00 0.00 4.70
2528 5854 3.499338 ACCTTTTGAACATCATGGAGCA 58.501 40.909 0.00 0.00 0.00 4.26
2529 5855 4.091549 ACCTTTTGAACATCATGGAGCAT 58.908 39.130 0.00 0.00 0.00 3.79
2530 5856 5.263599 ACCTTTTGAACATCATGGAGCATA 58.736 37.500 0.00 0.00 0.00 3.14
2531 5857 5.895534 ACCTTTTGAACATCATGGAGCATAT 59.104 36.000 0.00 0.00 0.00 1.78
2532 5858 6.183360 ACCTTTTGAACATCATGGAGCATATG 60.183 38.462 0.00 0.00 0.00 1.78
2533 5859 6.040054 CCTTTTGAACATCATGGAGCATATGA 59.960 38.462 6.97 0.00 38.76 2.15
2534 5860 6.628919 TTTGAACATCATGGAGCATATGAG 57.371 37.500 6.97 0.00 37.91 2.90
2535 5861 5.556006 TGAACATCATGGAGCATATGAGA 57.444 39.130 6.97 0.00 37.91 3.27
2536 5862 6.123045 TGAACATCATGGAGCATATGAGAT 57.877 37.500 6.97 0.00 37.91 2.75
2537 5863 5.938125 TGAACATCATGGAGCATATGAGATG 59.062 40.000 6.97 10.91 37.91 2.90
2538 5864 5.500546 ACATCATGGAGCATATGAGATGT 57.499 39.130 6.97 11.47 39.59 3.06
2539 5865 5.877491 ACATCATGGAGCATATGAGATGTT 58.123 37.500 6.97 0.00 41.02 2.71
2540 5866 5.938710 ACATCATGGAGCATATGAGATGTTC 59.061 40.000 6.97 0.00 41.02 3.18
2541 5867 4.903054 TCATGGAGCATATGAGATGTTCC 58.097 43.478 14.90 14.90 45.81 3.62
2544 5870 3.672808 GGAGCATATGAGATGTTCCAGG 58.327 50.000 16.53 0.00 45.21 4.45
2545 5871 3.326006 GGAGCATATGAGATGTTCCAGGA 59.674 47.826 16.53 0.00 45.21 3.86
2546 5872 4.563168 GGAGCATATGAGATGTTCCAGGAG 60.563 50.000 16.53 0.00 45.21 3.69
2547 5873 3.972638 AGCATATGAGATGTTCCAGGAGT 59.027 43.478 6.97 0.00 0.00 3.85
2548 5874 4.411540 AGCATATGAGATGTTCCAGGAGTT 59.588 41.667 6.97 0.00 0.00 3.01
2549 5875 4.514441 GCATATGAGATGTTCCAGGAGTTG 59.486 45.833 6.97 0.00 0.00 3.16
2550 5876 5.685861 GCATATGAGATGTTCCAGGAGTTGA 60.686 44.000 6.97 0.00 0.00 3.18
2551 5877 4.916041 ATGAGATGTTCCAGGAGTTGAA 57.084 40.909 0.00 0.00 0.00 2.69
2552 5878 4.916041 TGAGATGTTCCAGGAGTTGAAT 57.084 40.909 0.00 0.00 0.00 2.57
2553 5879 5.246981 TGAGATGTTCCAGGAGTTGAATT 57.753 39.130 0.00 0.00 0.00 2.17
2554 5880 5.634118 TGAGATGTTCCAGGAGTTGAATTT 58.366 37.500 0.00 0.00 0.00 1.82
2555 5881 6.778821 TGAGATGTTCCAGGAGTTGAATTTA 58.221 36.000 0.00 0.00 0.00 1.40
2556 5882 7.230747 TGAGATGTTCCAGGAGTTGAATTTAA 58.769 34.615 0.00 0.00 0.00 1.52
2557 5883 7.890127 TGAGATGTTCCAGGAGTTGAATTTAAT 59.110 33.333 0.00 0.00 0.00 1.40
2558 5884 9.396022 GAGATGTTCCAGGAGTTGAATTTAATA 57.604 33.333 0.00 0.00 0.00 0.98
2559 5885 9.927081 AGATGTTCCAGGAGTTGAATTTAATAT 57.073 29.630 0.00 0.00 0.00 1.28
2566 5892 9.305925 CCAGGAGTTGAATTTAATATTTCAAGC 57.694 33.333 0.00 0.00 41.20 4.01
2567 5893 9.859427 CAGGAGTTGAATTTAATATTTCAAGCA 57.141 29.630 0.00 0.00 41.20 3.91
2574 5900 8.891720 TGAATTTAATATTTCAAGCAAATGCCC 58.108 29.630 0.94 0.00 43.38 5.36
2575 5901 6.900568 TTTAATATTTCAAGCAAATGCCCG 57.099 33.333 0.94 0.00 43.38 6.13
2576 5902 4.734398 AATATTTCAAGCAAATGCCCGA 57.266 36.364 0.94 0.00 43.38 5.14
2577 5903 4.734398 ATATTTCAAGCAAATGCCCGAA 57.266 36.364 0.94 2.57 43.38 4.30
2578 5904 3.615224 ATTTCAAGCAAATGCCCGAAT 57.385 38.095 0.94 0.00 43.38 3.34
2579 5905 3.399440 TTTCAAGCAAATGCCCGAATT 57.601 38.095 0.94 0.00 43.38 2.17
2580 5906 2.367030 TCAAGCAAATGCCCGAATTG 57.633 45.000 0.94 0.14 43.38 2.32
2581 5907 1.891811 TCAAGCAAATGCCCGAATTGA 59.108 42.857 0.94 2.60 43.38 2.57
2582 5908 2.094597 TCAAGCAAATGCCCGAATTGAG 60.095 45.455 0.94 0.00 43.38 3.02
2583 5909 1.838112 AGCAAATGCCCGAATTGAGA 58.162 45.000 0.94 0.00 43.38 3.27
2584 5910 1.747355 AGCAAATGCCCGAATTGAGAG 59.253 47.619 0.94 0.00 43.38 3.20
2585 5911 1.745087 GCAAATGCCCGAATTGAGAGA 59.255 47.619 0.00 0.00 34.31 3.10
2586 5912 2.360165 GCAAATGCCCGAATTGAGAGAT 59.640 45.455 0.00 0.00 34.31 2.75
2587 5913 3.565482 GCAAATGCCCGAATTGAGAGATA 59.435 43.478 0.00 0.00 34.31 1.98
2588 5914 4.217118 GCAAATGCCCGAATTGAGAGATAT 59.783 41.667 0.00 0.00 34.31 1.63
2589 5915 5.696822 CAAATGCCCGAATTGAGAGATATG 58.303 41.667 0.00 0.00 0.00 1.78
2590 5916 4.897509 ATGCCCGAATTGAGAGATATGA 57.102 40.909 0.00 0.00 0.00 2.15
2591 5917 4.687901 TGCCCGAATTGAGAGATATGAA 57.312 40.909 0.00 0.00 0.00 2.57
2592 5918 4.635223 TGCCCGAATTGAGAGATATGAAG 58.365 43.478 0.00 0.00 0.00 3.02
2593 5919 4.101585 TGCCCGAATTGAGAGATATGAAGT 59.898 41.667 0.00 0.00 0.00 3.01
2594 5920 4.688413 GCCCGAATTGAGAGATATGAAGTC 59.312 45.833 0.00 0.00 0.00 3.01
2595 5921 5.510520 GCCCGAATTGAGAGATATGAAGTCT 60.511 44.000 0.00 0.00 0.00 3.24
2596 5922 6.155827 CCCGAATTGAGAGATATGAAGTCTC 58.844 44.000 0.00 0.00 41.89 3.36
2597 5923 6.155827 CCGAATTGAGAGATATGAAGTCTCC 58.844 44.000 0.00 0.00 42.41 3.71
2598 5924 6.239148 CCGAATTGAGAGATATGAAGTCTCCA 60.239 42.308 0.00 0.00 42.41 3.86
2599 5925 7.205992 CGAATTGAGAGATATGAAGTCTCCAA 58.794 38.462 0.00 5.02 42.41 3.53
2600 5926 7.871973 CGAATTGAGAGATATGAAGTCTCCAAT 59.128 37.037 10.97 10.97 42.41 3.16
2604 5930 8.774546 TGAGAGATATGAAGTCTCCAATAAGT 57.225 34.615 0.00 0.00 42.41 2.24
2605 5931 9.206690 TGAGAGATATGAAGTCTCCAATAAGTT 57.793 33.333 0.00 0.00 42.41 2.66
2606 5932 9.691362 GAGAGATATGAAGTCTCCAATAAGTTC 57.309 37.037 0.00 0.00 42.41 3.01
2607 5933 9.432982 AGAGATATGAAGTCTCCAATAAGTTCT 57.567 33.333 0.00 0.00 42.41 3.01
2612 5938 6.349300 TGAAGTCTCCAATAAGTTCTATGGC 58.651 40.000 0.00 0.00 32.87 4.40
2613 5939 6.156949 TGAAGTCTCCAATAAGTTCTATGGCT 59.843 38.462 0.00 0.00 32.87 4.75
2614 5940 5.923204 AGTCTCCAATAAGTTCTATGGCTG 58.077 41.667 0.00 0.00 32.87 4.85
2615 5941 4.513318 GTCTCCAATAAGTTCTATGGCTGC 59.487 45.833 0.00 0.00 32.87 5.25
2616 5942 4.164030 TCTCCAATAAGTTCTATGGCTGCA 59.836 41.667 0.50 0.00 32.87 4.41
2617 5943 4.854173 TCCAATAAGTTCTATGGCTGCAA 58.146 39.130 0.50 0.00 32.87 4.08
2618 5944 5.260424 TCCAATAAGTTCTATGGCTGCAAA 58.740 37.500 0.50 0.00 32.87 3.68
2619 5945 5.714333 TCCAATAAGTTCTATGGCTGCAAAA 59.286 36.000 0.50 0.00 32.87 2.44
2620 5946 6.380846 TCCAATAAGTTCTATGGCTGCAAAAT 59.619 34.615 0.50 0.00 32.87 1.82
2621 5947 6.477688 CCAATAAGTTCTATGGCTGCAAAATG 59.522 38.462 0.50 0.00 0.00 2.32
2622 5948 4.460948 AAGTTCTATGGCTGCAAAATGG 57.539 40.909 0.50 0.00 0.00 3.16
2623 5949 3.700538 AGTTCTATGGCTGCAAAATGGA 58.299 40.909 0.50 0.00 0.00 3.41
2624 5950 3.698040 AGTTCTATGGCTGCAAAATGGAG 59.302 43.478 0.50 0.00 38.97 3.86
2625 5951 2.658285 TCTATGGCTGCAAAATGGAGG 58.342 47.619 0.50 0.00 36.25 4.30
2626 5952 2.241941 TCTATGGCTGCAAAATGGAGGA 59.758 45.455 0.50 0.00 36.25 3.71
2627 5953 1.481871 ATGGCTGCAAAATGGAGGAG 58.518 50.000 0.50 0.00 36.25 3.69
2628 5954 0.405198 TGGCTGCAAAATGGAGGAGA 59.595 50.000 0.50 0.00 36.25 3.71
2629 5955 1.203038 TGGCTGCAAAATGGAGGAGAA 60.203 47.619 0.50 0.00 36.25 2.87
2630 5956 2.105766 GGCTGCAAAATGGAGGAGAAT 58.894 47.619 0.50 0.00 36.25 2.40
2631 5957 3.290710 GGCTGCAAAATGGAGGAGAATA 58.709 45.455 0.50 0.00 36.25 1.75
2632 5958 3.317430 GGCTGCAAAATGGAGGAGAATAG 59.683 47.826 0.50 0.00 36.25 1.73
2633 5959 3.950395 GCTGCAAAATGGAGGAGAATAGT 59.050 43.478 0.00 0.00 36.25 2.12
2634 5960 4.400567 GCTGCAAAATGGAGGAGAATAGTT 59.599 41.667 0.00 0.00 36.25 2.24
2635 5961 5.449725 GCTGCAAAATGGAGGAGAATAGTTC 60.450 44.000 0.00 0.00 36.25 3.01
2636 5962 5.819991 TGCAAAATGGAGGAGAATAGTTCT 58.180 37.500 0.00 0.00 44.21 3.01
2637 5963 5.649395 TGCAAAATGGAGGAGAATAGTTCTG 59.351 40.000 0.00 0.00 40.87 3.02
2638 5964 5.649831 GCAAAATGGAGGAGAATAGTTCTGT 59.350 40.000 0.00 0.00 40.87 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.349713 CTACTGAAATATTTTGGCCATAAGGTA 57.650 33.333 6.09 0.00 37.19 3.08
2 3 8.237811 ACTACTGAAATATTTTGGCCATAAGG 57.762 34.615 6.09 0.00 38.23 2.69
4 5 9.688091 TGTACTACTGAAATATTTTGGCCATAA 57.312 29.630 6.09 9.16 0.00 1.90
5 6 9.116067 GTGTACTACTGAAATATTTTGGCCATA 57.884 33.333 6.09 0.00 0.00 2.74
7 8 6.943146 TGTGTACTACTGAAATATTTTGGCCA 59.057 34.615 0.00 0.00 0.00 5.36
8 9 7.385778 TGTGTACTACTGAAATATTTTGGCC 57.614 36.000 1.43 0.00 0.00 5.36
9 10 7.335924 TCCTGTGTACTACTGAAATATTTTGGC 59.664 37.037 1.43 0.00 0.00 4.52
10 11 8.786826 TCCTGTGTACTACTGAAATATTTTGG 57.213 34.615 1.43 1.46 0.00 3.28
17 18 8.918202 TTTGAATTCCTGTGTACTACTGAAAT 57.082 30.769 2.27 0.00 0.00 2.17
18 19 8.918202 ATTTGAATTCCTGTGTACTACTGAAA 57.082 30.769 2.27 0.00 0.00 2.69
86 88 8.303876 GCCAAAAGGTAGAAATATTCACTTGAA 58.696 33.333 0.00 0.00 38.56 2.69
101 103 6.364976 CGGTTTAAATTTCAGCCAAAAGGTAG 59.635 38.462 6.14 0.00 0.00 3.18
102 104 6.040616 TCGGTTTAAATTTCAGCCAAAAGGTA 59.959 34.615 6.14 0.00 0.00 3.08
103 105 5.053811 CGGTTTAAATTTCAGCCAAAAGGT 58.946 37.500 6.14 0.00 0.00 3.50
131 133 9.840427 ATCACCGAAATTCAGTAAATTTTAGTG 57.160 29.630 15.09 15.09 45.47 2.74
135 137 8.911662 CGAAATCACCGAAATTCAGTAAATTTT 58.088 29.630 0.00 0.00 45.47 1.82
137 139 7.812648 TCGAAATCACCGAAATTCAGTAAATT 58.187 30.769 0.00 0.00 39.30 1.82
138 140 7.372451 TCGAAATCACCGAAATTCAGTAAAT 57.628 32.000 0.00 0.00 32.64 1.40
139 141 6.788684 TCGAAATCACCGAAATTCAGTAAA 57.211 33.333 0.00 0.00 32.64 2.01
155 157 6.710692 AAAATTTCAGCACCAATCGAAATC 57.289 33.333 0.00 0.00 37.15 2.17
162 164 7.011669 CAGTTTCAGAAAAATTTCAGCACCAAT 59.988 33.333 8.47 0.00 39.61 3.16
192 200 6.768381 GGAATTCAATACTGCTAGCTTTAGGT 59.232 38.462 17.23 9.24 0.00 3.08
199 207 3.251972 GCCTGGAATTCAATACTGCTAGC 59.748 47.826 8.10 8.10 0.00 3.42
204 212 1.003545 CGCGCCTGGAATTCAATACTG 60.004 52.381 7.93 0.00 0.00 2.74
221 229 2.628194 CGTAGGTCATCAATTTCGCG 57.372 50.000 0.00 0.00 0.00 5.87
242 250 1.129437 GAGAAGGCGATGTCTTGTTGC 59.871 52.381 0.00 0.00 0.00 4.17
274 282 3.300934 ATCAACTCGCGCCAGCTCA 62.301 57.895 0.50 0.00 42.32 4.26
291 299 2.361757 CGAGCTCTGAGACAGATTGGAT 59.638 50.000 12.85 0.00 39.92 3.41
292 300 1.747924 CGAGCTCTGAGACAGATTGGA 59.252 52.381 12.85 0.00 39.92 3.53
294 302 2.528125 CACGAGCTCTGAGACAGATTG 58.472 52.381 12.85 0.00 39.92 2.67
296 304 1.102154 CCACGAGCTCTGAGACAGAT 58.898 55.000 12.85 0.00 39.92 2.90
297 305 0.962855 CCCACGAGCTCTGAGACAGA 60.963 60.000 12.85 0.00 38.25 3.41
298 306 1.510383 CCCACGAGCTCTGAGACAG 59.490 63.158 12.85 0.60 0.00 3.51
299 307 1.979155 CCCCACGAGCTCTGAGACA 60.979 63.158 12.85 0.00 0.00 3.41
362 373 0.107214 GGGATTGGATCAACTCGCCA 60.107 55.000 0.00 0.00 0.00 5.69
369 380 1.486310 CGGTGAGAGGGATTGGATCAA 59.514 52.381 0.00 0.00 0.00 2.57
620 640 7.910999 GAGTCTATCTCCAGGAATGTCCTAAGA 60.911 44.444 9.71 9.71 40.08 2.10
623 643 5.636123 GAGTCTATCTCCAGGAATGTCCTA 58.364 45.833 0.00 0.00 40.08 2.94
658 678 0.659427 CATATGTTGGCTGAGCACCG 59.341 55.000 6.82 0.00 0.00 4.94
681 701 2.361737 GGGCTTCACCTTCCCAGC 60.362 66.667 0.00 0.00 39.82 4.85
688 708 0.693049 ATCTTTGTCGGGCTTCACCT 59.307 50.000 0.00 0.00 39.10 4.00
800 846 3.911661 AATGCAGTTGAGAAGCTTCAC 57.088 42.857 27.57 21.76 0.00 3.18
843 889 8.812329 CGAAATCAACCACACTTATTTTGAAAA 58.188 29.630 0.00 0.00 30.34 2.29
846 892 7.033530 ACGAAATCAACCACACTTATTTTGA 57.966 32.000 0.00 0.00 0.00 2.69
847 893 7.858382 TGTACGAAATCAACCACACTTATTTTG 59.142 33.333 0.00 0.00 0.00 2.44
858 904 8.836268 AGTATAAAACTGTACGAAATCAACCA 57.164 30.769 0.00 0.00 36.93 3.67
859 905 9.750882 GAAGTATAAAACTGTACGAAATCAACC 57.249 33.333 0.00 0.00 38.88 3.77
907 953 5.302568 TCAGTACTCCTTCCGTAAAGAAACA 59.697 40.000 0.00 0.00 37.12 2.83
908 954 5.776744 TCAGTACTCCTTCCGTAAAGAAAC 58.223 41.667 0.00 0.00 37.12 2.78
912 958 8.943909 ATAAATTCAGTACTCCTTCCGTAAAG 57.056 34.615 0.00 0.00 34.52 1.85
946 1029 5.105756 CCTCAGTCCCAAAATAATTGTCACC 60.106 44.000 0.00 0.00 0.00 4.02
953 1036 5.842339 ACATTCCCTCAGTCCCAAAATAAT 58.158 37.500 0.00 0.00 0.00 1.28
962 1045 7.147897 CCCTATTTAAAAACATTCCCTCAGTCC 60.148 40.741 0.00 0.00 0.00 3.85
966 1049 8.909423 ATTCCCTATTTAAAAACATTCCCTCA 57.091 30.769 0.00 0.00 0.00 3.86
983 1067 9.588096 GAAACCACATTAATTAGGATTCCCTAT 57.412 33.333 9.38 0.00 44.14 2.57
1118 1209 3.942115 GACCAAACTTCTTATCTCTGCCC 59.058 47.826 0.00 0.00 0.00 5.36
1131 1222 2.122167 TTTGCCGCCGACCAAACTT 61.122 52.632 0.00 0.00 0.00 2.66
1162 4218 3.657038 TAGAGAGGTCGGCCGCCTT 62.657 63.158 32.34 23.90 40.50 4.35
1166 4222 0.100861 GAGTTTAGAGAGGTCGGCCG 59.899 60.000 22.12 22.12 40.50 6.13
1167 4223 1.183549 TGAGTTTAGAGAGGTCGGCC 58.816 55.000 0.00 0.00 0.00 6.13
1169 4225 4.458295 TGTACTTGAGTTTAGAGAGGTCGG 59.542 45.833 0.00 0.00 0.00 4.79
1248 4304 0.264955 GGTCCATGGTCTCCCTAGGA 59.735 60.000 11.48 0.00 33.67 2.94
1383 4439 3.469008 TCAGTGTCAACTCCGTCAAAT 57.531 42.857 0.00 0.00 32.98 2.32
1392 4448 6.016276 GTGACCCATAAAAATCAGTGTCAACT 60.016 38.462 0.00 0.00 36.98 3.16
1395 4451 5.240623 GTGTGACCCATAAAAATCAGTGTCA 59.759 40.000 0.00 0.00 0.00 3.58
1541 4609 4.093408 TGCTCACGTCTTCTTTATTCATGC 59.907 41.667 0.00 0.00 0.00 4.06
1550 4618 2.613977 CCTTCCATGCTCACGTCTTCTT 60.614 50.000 0.00 0.00 0.00 2.52
1705 4773 6.964807 TTTGCATCTATATGTTGGAGCATT 57.035 33.333 0.00 0.00 35.38 3.56
1792 4870 1.153901 CCTGCATTTTGCTCAGGCG 60.154 57.895 0.75 0.00 45.31 5.52
1793 4871 4.904466 CCTGCATTTTGCTCAGGC 57.096 55.556 0.75 0.00 45.31 4.85
1796 4878 1.865788 GACCGCCTGCATTTTGCTCA 61.866 55.000 0.75 0.00 45.31 4.26
1819 4901 0.953471 GCGACAGTTGTGGGTATGCA 60.953 55.000 0.00 0.00 0.00 3.96
1820 4902 1.794222 GCGACAGTTGTGGGTATGC 59.206 57.895 0.00 0.00 0.00 3.14
1822 4904 1.740296 GCGCGACAGTTGTGGGTAT 60.740 57.895 12.10 0.00 0.00 2.73
1828 4910 1.804326 GTATCCGCGCGACAGTTGT 60.804 57.895 34.63 10.81 0.00 3.32
1870 5186 3.771160 GGACGGCCGAGGTGTCAT 61.771 66.667 35.90 6.14 34.32 3.06
1882 5208 4.271816 CTCCGATGGCGAGGACGG 62.272 72.222 0.00 0.00 45.61 4.79
1886 5212 3.518998 ACGACTCCGATGGCGAGG 61.519 66.667 9.69 0.00 40.82 4.63
1887 5213 2.278206 CACGACTCCGATGGCGAG 60.278 66.667 9.69 0.00 40.82 5.03
1888 5214 3.822192 CCACGACTCCGATGGCGA 61.822 66.667 9.69 0.00 40.82 5.54
1889 5215 4.129737 ACCACGACTCCGATGGCG 62.130 66.667 1.46 1.46 39.14 5.69
1896 5222 1.592223 CTGGAAGGACCACGACTCC 59.408 63.158 0.00 0.00 44.64 3.85
1926 5252 2.594303 CTGCCACGACCCTTTGCA 60.594 61.111 0.00 0.00 0.00 4.08
1927 5253 1.896660 TTCTGCCACGACCCTTTGC 60.897 57.895 0.00 0.00 0.00 3.68
1996 5322 2.678934 AGTGCCCATGCCAAGCAG 60.679 61.111 0.00 0.00 43.65 4.24
2020 5346 1.302431 CATTGCCACCAGGACGACA 60.302 57.895 0.00 0.00 36.89 4.35
2021 5347 2.040544 CCATTGCCACCAGGACGAC 61.041 63.158 0.00 0.00 36.89 4.34
2065 5391 3.140814 GAATGACCAAGGGCGGCC 61.141 66.667 22.67 22.67 0.00 6.13
2066 5392 2.044946 AGAATGACCAAGGGCGGC 60.045 61.111 0.00 0.00 0.00 6.53
2101 5427 4.208686 CCTAGTCCGAGCGTGCCC 62.209 72.222 0.00 0.00 0.00 5.36
2103 5429 2.102553 GTCCTAGTCCGAGCGTGC 59.897 66.667 0.00 0.00 0.00 5.34
2157 5483 0.257328 TAGATTTCCGCCCAATGCCA 59.743 50.000 0.00 0.00 36.24 4.92
2159 5485 0.954452 CCTAGATTTCCGCCCAATGC 59.046 55.000 0.00 0.00 0.00 3.56
2161 5487 0.535102 CGCCTAGATTTCCGCCCAAT 60.535 55.000 0.00 0.00 0.00 3.16
2163 5489 2.504032 CGCCTAGATTTCCGCCCA 59.496 61.111 0.00 0.00 0.00 5.36
2203 5529 1.966451 GACCTCGTGTTGGCCTTGG 60.966 63.158 3.32 0.00 0.00 3.61
2223 5549 1.210967 TCAAACCGGTCTTCAACACCT 59.789 47.619 8.04 0.00 0.00 4.00
2232 5558 1.029681 GTTGCCTTTCAAACCGGTCT 58.970 50.000 8.04 0.00 36.26 3.85
2237 5563 3.832490 AGGGATTAGTTGCCTTTCAAACC 59.168 43.478 0.00 0.00 45.40 3.27
2240 5566 4.202567 ACTCAGGGATTAGTTGCCTTTCAA 60.203 41.667 0.00 0.00 45.40 2.69
2243 5569 4.536489 ACTACTCAGGGATTAGTTGCCTTT 59.464 41.667 0.00 0.00 45.40 3.11
2244 5570 4.104831 ACTACTCAGGGATTAGTTGCCTT 58.895 43.478 0.00 0.00 45.40 4.35
2246 5572 4.489306 AACTACTCAGGGATTAGTTGCC 57.511 45.455 7.83 0.00 36.91 4.52
2247 5573 5.123979 CCAAAACTACTCAGGGATTAGTTGC 59.876 44.000 9.00 0.00 37.82 4.17
2248 5574 6.238648 ACCAAAACTACTCAGGGATTAGTTG 58.761 40.000 9.00 1.12 37.82 3.16
2249 5575 6.449830 ACCAAAACTACTCAGGGATTAGTT 57.550 37.500 3.91 3.91 38.86 2.24
2250 5576 7.563724 TTACCAAAACTACTCAGGGATTAGT 57.436 36.000 0.00 0.00 31.02 2.24
2251 5577 9.110502 GAATTACCAAAACTACTCAGGGATTAG 57.889 37.037 0.00 0.00 0.00 1.73
2252 5578 8.832735 AGAATTACCAAAACTACTCAGGGATTA 58.167 33.333 0.00 0.00 0.00 1.75
2253 5579 7.699878 AGAATTACCAAAACTACTCAGGGATT 58.300 34.615 0.00 0.00 0.00 3.01
2254 5580 7.272144 AGAATTACCAAAACTACTCAGGGAT 57.728 36.000 0.00 0.00 0.00 3.85
2255 5581 6.697641 AGAATTACCAAAACTACTCAGGGA 57.302 37.500 0.00 0.00 0.00 4.20
2256 5582 8.727910 GTTAAGAATTACCAAAACTACTCAGGG 58.272 37.037 0.00 0.00 0.00 4.45
2257 5583 9.280174 TGTTAAGAATTACCAAAACTACTCAGG 57.720 33.333 0.00 0.00 0.00 3.86
2288 5614 9.842775 TGAAAGAATATCAGTTCATTGAGCTAT 57.157 29.630 2.46 1.44 0.00 2.97
2289 5615 9.671279 TTGAAAGAATATCAGTTCATTGAGCTA 57.329 29.630 2.46 0.00 30.51 3.32
2290 5616 8.571461 TTGAAAGAATATCAGTTCATTGAGCT 57.429 30.769 0.00 0.00 30.51 4.09
2291 5617 8.671921 TCTTGAAAGAATATCAGTTCATTGAGC 58.328 33.333 0.00 0.00 30.51 4.26
2320 5646 7.977853 GCCAATCATTGTACTTTCTGAAATGAT 59.022 33.333 2.88 6.13 45.34 2.45
2321 5647 7.039853 TGCCAATCATTGTACTTTCTGAAATGA 60.040 33.333 2.88 4.02 40.45 2.57
2322 5648 7.092079 TGCCAATCATTGTACTTTCTGAAATG 58.908 34.615 2.88 0.00 0.00 2.32
2323 5649 7.230849 TGCCAATCATTGTACTTTCTGAAAT 57.769 32.000 2.88 0.00 0.00 2.17
2324 5650 6.647334 TGCCAATCATTGTACTTTCTGAAA 57.353 33.333 2.44 2.44 0.00 2.69
2325 5651 6.350361 CCATGCCAATCATTGTACTTTCTGAA 60.350 38.462 0.00 0.00 31.79 3.02
2326 5652 5.125900 CCATGCCAATCATTGTACTTTCTGA 59.874 40.000 0.00 0.00 31.79 3.27
2327 5653 5.345702 CCATGCCAATCATTGTACTTTCTG 58.654 41.667 0.00 0.00 31.79 3.02
2328 5654 4.142093 GCCATGCCAATCATTGTACTTTCT 60.142 41.667 0.00 0.00 31.79 2.52
2329 5655 4.114794 GCCATGCCAATCATTGTACTTTC 58.885 43.478 0.00 0.00 31.79 2.62
2330 5656 3.514706 TGCCATGCCAATCATTGTACTTT 59.485 39.130 0.00 0.00 31.79 2.66
2331 5657 3.098377 TGCCATGCCAATCATTGTACTT 58.902 40.909 0.00 0.00 31.79 2.24
2332 5658 2.737544 TGCCATGCCAATCATTGTACT 58.262 42.857 0.00 0.00 31.79 2.73
2333 5659 3.386486 CATGCCATGCCAATCATTGTAC 58.614 45.455 0.00 0.00 31.79 2.90
2334 5660 2.365941 CCATGCCATGCCAATCATTGTA 59.634 45.455 0.00 0.00 31.79 2.41
2335 5661 1.140052 CCATGCCATGCCAATCATTGT 59.860 47.619 0.00 0.00 31.79 2.71
2336 5662 1.414550 TCCATGCCATGCCAATCATTG 59.585 47.619 0.00 0.00 31.79 2.82
2337 5663 1.414919 GTCCATGCCATGCCAATCATT 59.585 47.619 0.00 0.00 31.79 2.57
2338 5664 1.045407 GTCCATGCCATGCCAATCAT 58.955 50.000 0.00 0.00 35.31 2.45
2339 5665 0.032912 AGTCCATGCCATGCCAATCA 60.033 50.000 0.00 0.00 0.00 2.57
2340 5666 1.985473 TAGTCCATGCCATGCCAATC 58.015 50.000 0.00 0.00 0.00 2.67
2341 5667 2.457813 TTAGTCCATGCCATGCCAAT 57.542 45.000 0.00 0.00 0.00 3.16
2342 5668 2.101783 CTTTAGTCCATGCCATGCCAA 58.898 47.619 0.00 0.00 0.00 4.52
2343 5669 1.685803 CCTTTAGTCCATGCCATGCCA 60.686 52.381 0.00 0.00 0.00 4.92
2344 5670 1.035139 CCTTTAGTCCATGCCATGCC 58.965 55.000 0.00 0.00 0.00 4.40
2345 5671 2.057137 TCCTTTAGTCCATGCCATGC 57.943 50.000 0.00 0.00 0.00 4.06
2346 5672 3.317149 CACATCCTTTAGTCCATGCCATG 59.683 47.826 0.00 0.00 0.00 3.66
2347 5673 3.559069 CACATCCTTTAGTCCATGCCAT 58.441 45.455 0.00 0.00 0.00 4.40
2348 5674 2.357050 CCACATCCTTTAGTCCATGCCA 60.357 50.000 0.00 0.00 0.00 4.92
2349 5675 2.092429 TCCACATCCTTTAGTCCATGCC 60.092 50.000 0.00 0.00 0.00 4.40
2350 5676 2.945668 GTCCACATCCTTTAGTCCATGC 59.054 50.000 0.00 0.00 0.00 4.06
2351 5677 3.545703 GGTCCACATCCTTTAGTCCATG 58.454 50.000 0.00 0.00 0.00 3.66
2352 5678 2.509964 GGGTCCACATCCTTTAGTCCAT 59.490 50.000 0.00 0.00 0.00 3.41
2353 5679 1.913419 GGGTCCACATCCTTTAGTCCA 59.087 52.381 0.00 0.00 0.00 4.02
2354 5680 1.212195 GGGGTCCACATCCTTTAGTCC 59.788 57.143 0.00 0.00 0.00 3.85
2355 5681 2.170817 GAGGGGTCCACATCCTTTAGTC 59.829 54.545 0.00 0.00 0.00 2.59
2356 5682 2.197465 GAGGGGTCCACATCCTTTAGT 58.803 52.381 0.00 0.00 0.00 2.24
2357 5683 2.196595 TGAGGGGTCCACATCCTTTAG 58.803 52.381 0.00 0.00 0.00 1.85
2358 5684 2.352561 TGAGGGGTCCACATCCTTTA 57.647 50.000 0.00 0.00 0.00 1.85
2359 5685 1.455822 TTGAGGGGTCCACATCCTTT 58.544 50.000 0.00 0.00 0.00 3.11
2360 5686 1.455822 TTTGAGGGGTCCACATCCTT 58.544 50.000 0.00 0.00 0.00 3.36
2361 5687 1.455822 TTTTGAGGGGTCCACATCCT 58.544 50.000 0.00 0.00 0.00 3.24
2362 5688 2.102578 CATTTTGAGGGGTCCACATCC 58.897 52.381 0.00 0.00 0.00 3.51
2363 5689 1.478105 GCATTTTGAGGGGTCCACATC 59.522 52.381 0.00 0.00 0.00 3.06
2364 5690 1.077663 AGCATTTTGAGGGGTCCACAT 59.922 47.619 0.00 0.00 0.00 3.21
2365 5691 0.482446 AGCATTTTGAGGGGTCCACA 59.518 50.000 0.00 0.00 0.00 4.17
2366 5692 2.507407 TAGCATTTTGAGGGGTCCAC 57.493 50.000 0.00 0.00 0.00 4.02
2367 5693 2.291540 CCTTAGCATTTTGAGGGGTCCA 60.292 50.000 0.00 0.00 0.00 4.02
2368 5694 2.025321 TCCTTAGCATTTTGAGGGGTCC 60.025 50.000 0.00 0.00 0.00 4.46
2369 5695 3.017442 GTCCTTAGCATTTTGAGGGGTC 58.983 50.000 0.00 0.00 0.00 4.46
2370 5696 2.378547 TGTCCTTAGCATTTTGAGGGGT 59.621 45.455 0.00 0.00 0.00 4.95
2371 5697 2.755103 GTGTCCTTAGCATTTTGAGGGG 59.245 50.000 0.00 0.00 0.00 4.79
2372 5698 3.420893 TGTGTCCTTAGCATTTTGAGGG 58.579 45.455 0.00 0.00 0.00 4.30
2373 5699 6.949352 ATATGTGTCCTTAGCATTTTGAGG 57.051 37.500 0.00 0.00 0.00 3.86
2374 5700 7.198390 CCAATATGTGTCCTTAGCATTTTGAG 58.802 38.462 0.00 0.00 35.26 3.02
2375 5701 6.405731 GCCAATATGTGTCCTTAGCATTTTGA 60.406 38.462 0.00 0.00 35.26 2.69
2376 5702 5.750067 GCCAATATGTGTCCTTAGCATTTTG 59.250 40.000 0.00 0.00 34.04 2.44
2377 5703 5.421693 TGCCAATATGTGTCCTTAGCATTTT 59.578 36.000 0.00 0.00 0.00 1.82
2378 5704 4.955450 TGCCAATATGTGTCCTTAGCATTT 59.045 37.500 0.00 0.00 0.00 2.32
2379 5705 4.535781 TGCCAATATGTGTCCTTAGCATT 58.464 39.130 0.00 0.00 0.00 3.56
2380 5706 4.169059 TGCCAATATGTGTCCTTAGCAT 57.831 40.909 0.00 0.00 0.00 3.79
2381 5707 3.643199 TGCCAATATGTGTCCTTAGCA 57.357 42.857 0.00 0.00 0.00 3.49
2382 5708 4.981806 TTTGCCAATATGTGTCCTTAGC 57.018 40.909 0.00 0.00 0.00 3.09
2383 5709 5.343249 GCTTTTGCCAATATGTGTCCTTAG 58.657 41.667 0.00 0.00 40.15 2.18
2384 5710 5.323371 GCTTTTGCCAATATGTGTCCTTA 57.677 39.130 0.00 0.00 40.15 2.69
2385 5711 4.192429 GCTTTTGCCAATATGTGTCCTT 57.808 40.909 0.00 0.00 40.15 3.36
2386 5712 3.874392 GCTTTTGCCAATATGTGTCCT 57.126 42.857 0.00 0.00 40.15 3.85
2400 5726 6.073548 ACAAAATGTAGAGTCTCGAGCTTTTG 60.074 38.462 20.26 20.26 37.19 2.44
2401 5727 5.992217 ACAAAATGTAGAGTCTCGAGCTTTT 59.008 36.000 7.81 3.09 0.00 2.27
2402 5728 5.406780 CACAAAATGTAGAGTCTCGAGCTTT 59.593 40.000 7.81 6.36 0.00 3.51
2403 5729 4.926238 CACAAAATGTAGAGTCTCGAGCTT 59.074 41.667 7.81 0.00 0.00 3.74
2404 5730 4.218635 TCACAAAATGTAGAGTCTCGAGCT 59.781 41.667 7.81 8.39 0.00 4.09
2405 5731 4.486090 TCACAAAATGTAGAGTCTCGAGC 58.514 43.478 7.81 2.90 0.00 5.03
2406 5732 5.059832 CGTTCACAAAATGTAGAGTCTCGAG 59.940 44.000 5.93 5.93 0.00 4.04
2407 5733 4.915667 CGTTCACAAAATGTAGAGTCTCGA 59.084 41.667 0.00 0.00 0.00 4.04
2408 5734 4.680110 ACGTTCACAAAATGTAGAGTCTCG 59.320 41.667 0.00 0.00 0.00 4.04
2409 5735 5.921408 AGACGTTCACAAAATGTAGAGTCTC 59.079 40.000 0.00 0.00 30.51 3.36
2410 5736 5.692204 CAGACGTTCACAAAATGTAGAGTCT 59.308 40.000 0.00 0.00 35.88 3.24
2411 5737 5.107453 CCAGACGTTCACAAAATGTAGAGTC 60.107 44.000 0.00 0.00 0.00 3.36
2412 5738 4.750098 CCAGACGTTCACAAAATGTAGAGT 59.250 41.667 0.00 0.00 0.00 3.24
2413 5739 4.377431 GCCAGACGTTCACAAAATGTAGAG 60.377 45.833 0.00 0.00 0.00 2.43
2414 5740 3.496884 GCCAGACGTTCACAAAATGTAGA 59.503 43.478 0.00 0.00 0.00 2.59
2415 5741 3.249799 TGCCAGACGTTCACAAAATGTAG 59.750 43.478 0.00 0.00 0.00 2.74
2416 5742 3.206964 TGCCAGACGTTCACAAAATGTA 58.793 40.909 0.00 0.00 0.00 2.29
2417 5743 2.020720 TGCCAGACGTTCACAAAATGT 58.979 42.857 0.00 0.00 0.00 2.71
2418 5744 2.290367 TCTGCCAGACGTTCACAAAATG 59.710 45.455 0.00 0.00 0.00 2.32
2419 5745 2.549754 CTCTGCCAGACGTTCACAAAAT 59.450 45.455 0.00 0.00 0.00 1.82
2420 5746 1.939934 CTCTGCCAGACGTTCACAAAA 59.060 47.619 0.00 0.00 0.00 2.44
2421 5747 1.581934 CTCTGCCAGACGTTCACAAA 58.418 50.000 0.00 0.00 0.00 2.83
2422 5748 0.880278 GCTCTGCCAGACGTTCACAA 60.880 55.000 0.00 0.00 0.00 3.33
2423 5749 1.300931 GCTCTGCCAGACGTTCACA 60.301 57.895 0.00 0.00 0.00 3.58
2424 5750 0.880278 TTGCTCTGCCAGACGTTCAC 60.880 55.000 0.00 0.00 0.00 3.18
2425 5751 0.179059 TTTGCTCTGCCAGACGTTCA 60.179 50.000 0.00 0.00 0.00 3.18
2426 5752 0.514691 CTTTGCTCTGCCAGACGTTC 59.485 55.000 0.00 0.00 0.00 3.95
2427 5753 1.510480 GCTTTGCTCTGCCAGACGTT 61.510 55.000 0.00 0.00 0.00 3.99
2428 5754 1.963338 GCTTTGCTCTGCCAGACGT 60.963 57.895 0.00 0.00 0.00 4.34
2429 5755 1.670406 AGCTTTGCTCTGCCAGACG 60.670 57.895 0.00 0.00 30.62 4.18
2430 5756 0.604780 TCAGCTTTGCTCTGCCAGAC 60.605 55.000 0.00 0.00 36.40 3.51
2431 5757 0.327259 ATCAGCTTTGCTCTGCCAGA 59.673 50.000 0.00 0.00 36.40 3.86
2432 5758 0.452184 CATCAGCTTTGCTCTGCCAG 59.548 55.000 0.00 0.00 36.40 4.85
2433 5759 0.037160 TCATCAGCTTTGCTCTGCCA 59.963 50.000 0.00 0.00 36.40 4.92
2434 5760 0.450983 GTCATCAGCTTTGCTCTGCC 59.549 55.000 0.00 0.00 36.40 4.85
2435 5761 1.451067 AGTCATCAGCTTTGCTCTGC 58.549 50.000 0.00 0.00 36.40 4.26
2436 5762 3.859443 AGTAGTCATCAGCTTTGCTCTG 58.141 45.455 0.00 0.00 36.40 3.35
2437 5763 3.428725 CGAGTAGTCATCAGCTTTGCTCT 60.429 47.826 0.00 0.00 36.40 4.09
2438 5764 2.857152 CGAGTAGTCATCAGCTTTGCTC 59.143 50.000 0.00 0.00 36.40 4.26
2439 5765 2.493675 TCGAGTAGTCATCAGCTTTGCT 59.506 45.455 0.00 0.00 40.77 3.91
2440 5766 2.881074 TCGAGTAGTCATCAGCTTTGC 58.119 47.619 0.00 0.00 0.00 3.68
2441 5767 5.826586 ACTATCGAGTAGTCATCAGCTTTG 58.173 41.667 0.00 0.00 39.46 2.77
2442 5768 6.095580 TGAACTATCGAGTAGTCATCAGCTTT 59.904 38.462 7.64 0.00 42.83 3.51
2443 5769 5.590663 TGAACTATCGAGTAGTCATCAGCTT 59.409 40.000 7.64 0.00 42.83 3.74
2444 5770 5.126779 TGAACTATCGAGTAGTCATCAGCT 58.873 41.667 7.64 0.00 42.83 4.24
2445 5771 5.008217 ACTGAACTATCGAGTAGTCATCAGC 59.992 44.000 21.39 0.00 44.67 4.26
2446 5772 6.037720 ACACTGAACTATCGAGTAGTCATCAG 59.962 42.308 20.68 20.68 45.47 2.90
2447 5773 5.880887 ACACTGAACTATCGAGTAGTCATCA 59.119 40.000 7.64 7.90 42.83 3.07
2448 5774 6.183360 ACACACTGAACTATCGAGTAGTCATC 60.183 42.308 7.64 4.77 42.83 2.92
2449 5775 5.648526 ACACACTGAACTATCGAGTAGTCAT 59.351 40.000 7.64 0.00 42.83 3.06
2450 5776 5.001874 ACACACTGAACTATCGAGTAGTCA 58.998 41.667 7.64 1.11 42.83 3.41
2451 5777 5.121925 TGACACACTGAACTATCGAGTAGTC 59.878 44.000 7.64 0.00 42.83 2.59
2452 5778 5.001874 TGACACACTGAACTATCGAGTAGT 58.998 41.667 0.00 0.00 45.56 2.73
2453 5779 5.547181 TGACACACTGAACTATCGAGTAG 57.453 43.478 0.00 0.00 33.58 2.57
2454 5780 5.676331 GCATGACACACTGAACTATCGAGTA 60.676 44.000 0.00 0.00 33.58 2.59
2455 5781 4.738124 CATGACACACTGAACTATCGAGT 58.262 43.478 0.00 0.00 37.59 4.18
2456 5782 3.549471 GCATGACACACTGAACTATCGAG 59.451 47.826 0.00 0.00 0.00 4.04
2457 5783 3.193479 AGCATGACACACTGAACTATCGA 59.807 43.478 0.00 0.00 0.00 3.59
2458 5784 3.515630 AGCATGACACACTGAACTATCG 58.484 45.455 0.00 0.00 0.00 2.92
2459 5785 5.869753 AAAGCATGACACACTGAACTATC 57.130 39.130 0.00 0.00 0.00 2.08
2460 5786 5.348724 CGTAAAGCATGACACACTGAACTAT 59.651 40.000 0.00 0.00 0.00 2.12
2461 5787 4.684242 CGTAAAGCATGACACACTGAACTA 59.316 41.667 0.00 0.00 0.00 2.24
2462 5788 3.494626 CGTAAAGCATGACACACTGAACT 59.505 43.478 0.00 0.00 0.00 3.01
2463 5789 3.363970 CCGTAAAGCATGACACACTGAAC 60.364 47.826 0.00 0.00 0.00 3.18
2464 5790 2.805671 CCGTAAAGCATGACACACTGAA 59.194 45.455 0.00 0.00 0.00 3.02
2465 5791 2.412870 CCGTAAAGCATGACACACTGA 58.587 47.619 0.00 0.00 0.00 3.41
2466 5792 1.135972 GCCGTAAAGCATGACACACTG 60.136 52.381 0.00 0.00 0.00 3.66
2467 5793 1.156736 GCCGTAAAGCATGACACACT 58.843 50.000 0.00 0.00 0.00 3.55
2468 5794 1.156736 AGCCGTAAAGCATGACACAC 58.843 50.000 0.00 0.00 34.23 3.82
2469 5795 1.890876 AAGCCGTAAAGCATGACACA 58.109 45.000 0.00 0.00 34.23 3.72
2470 5796 3.259064 TCTAAGCCGTAAAGCATGACAC 58.741 45.455 0.00 0.00 34.23 3.67
2471 5797 3.603158 TCTAAGCCGTAAAGCATGACA 57.397 42.857 0.00 0.00 34.23 3.58
2472 5798 4.318121 CGATTCTAAGCCGTAAAGCATGAC 60.318 45.833 0.00 0.00 34.23 3.06
2473 5799 3.802139 CGATTCTAAGCCGTAAAGCATGA 59.198 43.478 0.00 0.00 34.23 3.07
2474 5800 3.059597 CCGATTCTAAGCCGTAAAGCATG 60.060 47.826 0.00 0.00 34.23 4.06
2475 5801 3.131396 CCGATTCTAAGCCGTAAAGCAT 58.869 45.455 0.00 0.00 34.23 3.79
2476 5802 2.546778 CCGATTCTAAGCCGTAAAGCA 58.453 47.619 0.00 0.00 34.23 3.91
2477 5803 1.865340 CCCGATTCTAAGCCGTAAAGC 59.135 52.381 0.00 0.00 0.00 3.51
2478 5804 3.121544 GTCCCGATTCTAAGCCGTAAAG 58.878 50.000 0.00 0.00 0.00 1.85
2479 5805 2.762327 AGTCCCGATTCTAAGCCGTAAA 59.238 45.455 0.00 0.00 0.00 2.01
2480 5806 2.381911 AGTCCCGATTCTAAGCCGTAA 58.618 47.619 0.00 0.00 0.00 3.18
2481 5807 2.062971 AGTCCCGATTCTAAGCCGTA 57.937 50.000 0.00 0.00 0.00 4.02
2482 5808 1.136500 GAAGTCCCGATTCTAAGCCGT 59.864 52.381 0.00 0.00 0.00 5.68
2483 5809 1.136305 TGAAGTCCCGATTCTAAGCCG 59.864 52.381 0.00 0.00 0.00 5.52
2484 5810 2.981859 TGAAGTCCCGATTCTAAGCC 57.018 50.000 0.00 0.00 0.00 4.35
2485 5811 4.330347 GTCTTTGAAGTCCCGATTCTAAGC 59.670 45.833 5.41 0.00 38.53 3.09
2486 5812 4.870991 GGTCTTTGAAGTCCCGATTCTAAG 59.129 45.833 4.27 4.27 39.39 2.18
2487 5813 4.530946 AGGTCTTTGAAGTCCCGATTCTAA 59.469 41.667 3.84 0.00 35.22 2.10
2488 5814 4.094476 AGGTCTTTGAAGTCCCGATTCTA 58.906 43.478 3.84 0.00 35.22 2.10
2489 5815 2.907042 AGGTCTTTGAAGTCCCGATTCT 59.093 45.455 3.84 0.00 35.22 2.40
2490 5816 3.336138 AGGTCTTTGAAGTCCCGATTC 57.664 47.619 3.84 0.00 35.22 2.52
2491 5817 3.790089 AAGGTCTTTGAAGTCCCGATT 57.210 42.857 3.84 0.00 35.22 3.34
2492 5818 3.790089 AAAGGTCTTTGAAGTCCCGAT 57.210 42.857 3.84 0.00 35.22 4.18
2493 5819 3.118186 TCAAAAGGTCTTTGAAGTCCCGA 60.118 43.478 3.84 0.00 35.69 5.14
2494 5820 3.211045 TCAAAAGGTCTTTGAAGTCCCG 58.789 45.455 3.84 0.00 35.69 5.14
2495 5821 4.401202 TGTTCAAAAGGTCTTTGAAGTCCC 59.599 41.667 11.79 3.18 45.58 4.46
2496 5822 5.576447 TGTTCAAAAGGTCTTTGAAGTCC 57.424 39.130 11.79 0.00 45.58 3.85
2497 5823 6.795399 TGATGTTCAAAAGGTCTTTGAAGTC 58.205 36.000 11.79 12.66 45.58 3.01
2498 5824 6.773976 TGATGTTCAAAAGGTCTTTGAAGT 57.226 33.333 11.79 5.53 45.58 3.01
2499 5825 6.643770 CCATGATGTTCAAAAGGTCTTTGAAG 59.356 38.462 11.79 1.77 45.58 3.02
2500 5826 6.323482 TCCATGATGTTCAAAAGGTCTTTGAA 59.677 34.615 8.24 8.24 43.62 2.69
2501 5827 5.832595 TCCATGATGTTCAAAAGGTCTTTGA 59.167 36.000 0.00 0.00 36.71 2.69
2502 5828 6.088016 TCCATGATGTTCAAAAGGTCTTTG 57.912 37.500 0.00 0.00 32.36 2.77
2503 5829 5.279156 GCTCCATGATGTTCAAAAGGTCTTT 60.279 40.000 0.00 0.00 0.00 2.52
2504 5830 4.219288 GCTCCATGATGTTCAAAAGGTCTT 59.781 41.667 0.00 0.00 0.00 3.01
2505 5831 3.760684 GCTCCATGATGTTCAAAAGGTCT 59.239 43.478 0.00 0.00 0.00 3.85
2506 5832 3.507233 TGCTCCATGATGTTCAAAAGGTC 59.493 43.478 0.00 0.00 0.00 3.85
2507 5833 3.499338 TGCTCCATGATGTTCAAAAGGT 58.501 40.909 0.00 0.00 0.00 3.50
2508 5834 4.730949 ATGCTCCATGATGTTCAAAAGG 57.269 40.909 0.00 0.00 0.00 3.11
2509 5835 7.012989 TCTCATATGCTCCATGATGTTCAAAAG 59.987 37.037 0.00 0.00 32.18 2.27
2510 5836 6.829811 TCTCATATGCTCCATGATGTTCAAAA 59.170 34.615 0.00 0.00 32.18 2.44
2511 5837 6.358991 TCTCATATGCTCCATGATGTTCAAA 58.641 36.000 0.00 0.00 32.18 2.69
2512 5838 5.932455 TCTCATATGCTCCATGATGTTCAA 58.068 37.500 0.00 0.00 32.18 2.69
2513 5839 5.556006 TCTCATATGCTCCATGATGTTCA 57.444 39.130 0.00 0.00 32.18 3.18
2514 5840 5.938710 ACATCTCATATGCTCCATGATGTTC 59.061 40.000 0.00 0.00 39.64 3.18
2515 5841 5.877491 ACATCTCATATGCTCCATGATGTT 58.123 37.500 0.00 0.00 39.64 2.71
2516 5842 5.500546 ACATCTCATATGCTCCATGATGT 57.499 39.130 0.00 7.82 38.39 3.06
2517 5843 5.354513 GGAACATCTCATATGCTCCATGATG 59.645 44.000 0.00 7.28 35.09 3.07
2518 5844 5.013808 TGGAACATCTCATATGCTCCATGAT 59.986 40.000 6.11 0.00 38.82 2.45
2519 5845 4.348754 TGGAACATCTCATATGCTCCATGA 59.651 41.667 6.11 0.00 38.82 3.07
2520 5846 4.648651 TGGAACATCTCATATGCTCCATG 58.351 43.478 6.11 0.28 38.82 3.66
2521 5847 4.263374 CCTGGAACATCTCATATGCTCCAT 60.263 45.833 9.82 0.00 41.69 3.41
2522 5848 3.072038 CCTGGAACATCTCATATGCTCCA 59.928 47.826 9.19 9.19 40.71 3.86
2523 5849 3.326006 TCCTGGAACATCTCATATGCTCC 59.674 47.826 0.00 1.33 38.20 4.70
2524 5850 4.040217 ACTCCTGGAACATCTCATATGCTC 59.960 45.833 0.00 0.00 38.20 4.26
2525 5851 3.972638 ACTCCTGGAACATCTCATATGCT 59.027 43.478 0.00 0.00 38.20 3.79
2526 5852 4.348863 ACTCCTGGAACATCTCATATGC 57.651 45.455 0.00 0.00 38.20 3.14
2527 5853 5.922053 TCAACTCCTGGAACATCTCATATG 58.078 41.667 0.00 0.00 38.20 1.78
2528 5854 6.566079 TTCAACTCCTGGAACATCTCATAT 57.434 37.500 0.00 0.00 38.20 1.78
2529 5855 6.566079 ATTCAACTCCTGGAACATCTCATA 57.434 37.500 0.00 0.00 38.20 2.15
2530 5856 4.916041 TTCAACTCCTGGAACATCTCAT 57.084 40.909 0.00 0.00 38.20 2.90
2531 5857 4.916041 ATTCAACTCCTGGAACATCTCA 57.084 40.909 0.00 0.00 38.20 3.27
2532 5858 7.687941 TTAAATTCAACTCCTGGAACATCTC 57.312 36.000 0.00 0.00 38.20 2.75
2533 5859 9.927081 ATATTAAATTCAACTCCTGGAACATCT 57.073 29.630 0.00 0.00 38.20 2.90
2540 5866 9.305925 GCTTGAAATATTAAATTCAACTCCTGG 57.694 33.333 9.21 0.00 39.81 4.45
2541 5867 9.859427 TGCTTGAAATATTAAATTCAACTCCTG 57.141 29.630 9.21 3.60 39.81 3.86
2548 5874 8.891720 GGGCATTTGCTTGAAATATTAAATTCA 58.108 29.630 2.12 0.00 41.70 2.57
2549 5875 8.063630 CGGGCATTTGCTTGAAATATTAAATTC 58.936 33.333 2.12 0.00 41.70 2.17
2550 5876 7.768120 TCGGGCATTTGCTTGAAATATTAAATT 59.232 29.630 2.12 0.00 41.70 1.82
2551 5877 7.271511 TCGGGCATTTGCTTGAAATATTAAAT 58.728 30.769 2.12 0.00 41.70 1.40
2552 5878 6.634805 TCGGGCATTTGCTTGAAATATTAAA 58.365 32.000 2.12 0.00 41.70 1.52
2553 5879 6.214191 TCGGGCATTTGCTTGAAATATTAA 57.786 33.333 2.12 0.00 41.70 1.40
2554 5880 5.843673 TCGGGCATTTGCTTGAAATATTA 57.156 34.783 2.12 0.00 41.70 0.98
2555 5881 4.734398 TCGGGCATTTGCTTGAAATATT 57.266 36.364 2.12 0.00 41.70 1.28
2556 5882 4.734398 TTCGGGCATTTGCTTGAAATAT 57.266 36.364 2.12 0.00 41.70 1.28
2557 5883 4.734398 ATTCGGGCATTTGCTTGAAATA 57.266 36.364 11.82 0.00 41.70 1.40
2558 5884 3.615224 ATTCGGGCATTTGCTTGAAAT 57.385 38.095 11.82 2.34 41.70 2.17
2559 5885 3.065655 CAATTCGGGCATTTGCTTGAAA 58.934 40.909 11.82 0.48 41.70 2.69
2560 5886 2.298446 TCAATTCGGGCATTTGCTTGAA 59.702 40.909 2.12 7.36 41.70 2.69
2561 5887 1.891811 TCAATTCGGGCATTTGCTTGA 59.108 42.857 2.12 1.71 41.70 3.02
2562 5888 2.094597 TCTCAATTCGGGCATTTGCTTG 60.095 45.455 2.12 0.00 41.70 4.01
2563 5889 2.165030 CTCTCAATTCGGGCATTTGCTT 59.835 45.455 2.12 0.00 41.70 3.91
2564 5890 1.747355 CTCTCAATTCGGGCATTTGCT 59.253 47.619 2.12 0.00 41.70 3.91
2565 5891 1.745087 TCTCTCAATTCGGGCATTTGC 59.255 47.619 0.00 0.00 41.14 3.68
2566 5892 5.471116 TCATATCTCTCAATTCGGGCATTTG 59.529 40.000 0.00 0.00 0.00 2.32
2567 5893 5.624159 TCATATCTCTCAATTCGGGCATTT 58.376 37.500 0.00 0.00 0.00 2.32
2568 5894 5.233083 TCATATCTCTCAATTCGGGCATT 57.767 39.130 0.00 0.00 0.00 3.56
2569 5895 4.897509 TCATATCTCTCAATTCGGGCAT 57.102 40.909 0.00 0.00 0.00 4.40
2570 5896 4.101585 ACTTCATATCTCTCAATTCGGGCA 59.898 41.667 0.00 0.00 0.00 5.36
2571 5897 4.636249 ACTTCATATCTCTCAATTCGGGC 58.364 43.478 0.00 0.00 0.00 6.13
2572 5898 6.095432 AGACTTCATATCTCTCAATTCGGG 57.905 41.667 0.00 0.00 0.00 5.14
2573 5899 6.155827 GGAGACTTCATATCTCTCAATTCGG 58.844 44.000 2.30 0.00 42.02 4.30
2574 5900 6.743110 TGGAGACTTCATATCTCTCAATTCG 58.257 40.000 2.30 0.00 42.02 3.34
2578 5904 9.206690 ACTTATTGGAGACTTCATATCTCTCAA 57.793 33.333 2.30 5.51 42.02 3.02
2579 5905 8.774546 ACTTATTGGAGACTTCATATCTCTCA 57.225 34.615 2.30 0.00 42.02 3.27
2580 5906 9.691362 GAACTTATTGGAGACTTCATATCTCTC 57.309 37.037 2.30 0.00 42.02 3.20
2581 5907 9.432982 AGAACTTATTGGAGACTTCATATCTCT 57.567 33.333 2.30 0.00 42.02 3.10
2586 5912 8.150945 GCCATAGAACTTATTGGAGACTTCATA 58.849 37.037 0.00 0.00 0.00 2.15
2587 5913 6.995091 GCCATAGAACTTATTGGAGACTTCAT 59.005 38.462 0.00 0.00 0.00 2.57
2588 5914 6.156949 AGCCATAGAACTTATTGGAGACTTCA 59.843 38.462 0.00 0.00 0.00 3.02
2589 5915 6.481644 CAGCCATAGAACTTATTGGAGACTTC 59.518 42.308 0.00 0.00 0.00 3.01
2590 5916 6.352516 CAGCCATAGAACTTATTGGAGACTT 58.647 40.000 0.00 0.00 0.00 3.01
2591 5917 5.686124 GCAGCCATAGAACTTATTGGAGACT 60.686 44.000 0.00 0.00 0.00 3.24
2592 5918 4.513318 GCAGCCATAGAACTTATTGGAGAC 59.487 45.833 0.00 0.00 0.00 3.36
2593 5919 4.164030 TGCAGCCATAGAACTTATTGGAGA 59.836 41.667 0.00 0.00 0.00 3.71
2594 5920 4.454678 TGCAGCCATAGAACTTATTGGAG 58.545 43.478 0.00 0.00 0.00 3.86
2595 5921 4.502105 TGCAGCCATAGAACTTATTGGA 57.498 40.909 0.00 0.00 0.00 3.53
2596 5922 5.581126 TTTGCAGCCATAGAACTTATTGG 57.419 39.130 0.00 0.00 0.00 3.16
2597 5923 6.477688 CCATTTTGCAGCCATAGAACTTATTG 59.522 38.462 0.00 0.00 0.00 1.90
2598 5924 6.380846 TCCATTTTGCAGCCATAGAACTTATT 59.619 34.615 0.00 0.00 0.00 1.40
2599 5925 5.893255 TCCATTTTGCAGCCATAGAACTTAT 59.107 36.000 0.00 0.00 0.00 1.73
2600 5926 5.260424 TCCATTTTGCAGCCATAGAACTTA 58.740 37.500 0.00 0.00 0.00 2.24
2601 5927 4.088634 TCCATTTTGCAGCCATAGAACTT 58.911 39.130 0.00 0.00 0.00 2.66
2602 5928 3.698040 CTCCATTTTGCAGCCATAGAACT 59.302 43.478 0.00 0.00 0.00 3.01
2603 5929 3.181483 CCTCCATTTTGCAGCCATAGAAC 60.181 47.826 0.00 0.00 0.00 3.01
2604 5930 3.025978 CCTCCATTTTGCAGCCATAGAA 58.974 45.455 0.00 0.00 0.00 2.10
2605 5931 2.241941 TCCTCCATTTTGCAGCCATAGA 59.758 45.455 0.00 0.00 0.00 1.98
2606 5932 2.621998 CTCCTCCATTTTGCAGCCATAG 59.378 50.000 0.00 0.00 0.00 2.23
2607 5933 2.241941 TCTCCTCCATTTTGCAGCCATA 59.758 45.455 0.00 0.00 0.00 2.74
2608 5934 1.006281 TCTCCTCCATTTTGCAGCCAT 59.994 47.619 0.00 0.00 0.00 4.40
2609 5935 0.405198 TCTCCTCCATTTTGCAGCCA 59.595 50.000 0.00 0.00 0.00 4.75
2610 5936 1.549203 TTCTCCTCCATTTTGCAGCC 58.451 50.000 0.00 0.00 0.00 4.85
2611 5937 3.950395 ACTATTCTCCTCCATTTTGCAGC 59.050 43.478 0.00 0.00 0.00 5.25
2612 5938 5.884792 AGAACTATTCTCCTCCATTTTGCAG 59.115 40.000 0.00 0.00 34.07 4.41
2613 5939 5.649395 CAGAACTATTCTCCTCCATTTTGCA 59.351 40.000 0.00 0.00 38.11 4.08
2614 5940 5.649831 ACAGAACTATTCTCCTCCATTTTGC 59.350 40.000 0.00 0.00 38.11 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.