Multiple sequence alignment - TraesCS7A01G136200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G136200 chr7A 100.000 2923 0 0 1 2923 88959666 88956744 0.000000e+00 5398
1 TraesCS7A01G136200 chr7A 99.380 2580 16 0 1 2580 722320044 722317465 0.000000e+00 4676
2 TraesCS7A01G136200 chr7A 86.441 1947 239 16 1 1939 255889375 255887446 0.000000e+00 2109
3 TraesCS7A01G136200 chr7A 91.748 1127 85 5 842 1966 361795548 361796668 0.000000e+00 1559
4 TraesCS7A01G136200 chr7A 91.258 1121 77 7 842 1956 362148187 362149292 0.000000e+00 1507
5 TraesCS7A01G136200 chr7A 85.987 471 56 4 2112 2577 362149747 362150212 2.020000e-136 496
6 TraesCS7A01G136200 chr7A 88.684 380 36 6 2198 2577 699928670 699929042 9.550000e-125 457
7 TraesCS7A01G136200 chr3D 90.762 2230 162 17 10 2227 37735948 37738145 0.000000e+00 2937
8 TraesCS7A01G136200 chr6B 86.235 1947 238 19 1 1937 610805862 610807788 0.000000e+00 2084
9 TraesCS7A01G136200 chr6B 84.991 1126 146 18 822 1939 103963362 103964472 0.000000e+00 1122
10 TraesCS7A01G136200 chr6B 88.889 378 36 4 2198 2575 68183673 68184044 7.380000e-126 460
11 TraesCS7A01G136200 chr7B 86.200 1942 246 17 1 1937 574510873 574512797 0.000000e+00 2082
12 TraesCS7A01G136200 chr7B 88.421 380 37 6 2198 2577 639526457 639526085 4.440000e-123 451
13 TraesCS7A01G136200 chr7B 90.196 153 9 3 2772 2923 36438653 36438506 8.270000e-46 195
14 TraesCS7A01G136200 chr1A 86.079 1961 244 19 1 1952 184936442 184934502 0.000000e+00 2082
15 TraesCS7A01G136200 chr1A 97.988 646 12 1 1932 2577 379192241 379192885 0.000000e+00 1120
16 TraesCS7A01G136200 chr1A 88.684 380 36 6 2198 2577 254661024 254660652 9.550000e-125 457
17 TraesCS7A01G136200 chr7D 88.532 1744 143 27 842 2575 317664221 317662525 0.000000e+00 2060
18 TraesCS7A01G136200 chr7D 92.116 241 12 5 2684 2923 87437271 87437037 1.680000e-87 333
19 TraesCS7A01G136200 chr7D 93.333 120 7 1 2579 2697 87437409 87437290 2.990000e-40 176
20 TraesCS7A01G136200 chr5A 85.318 1948 270 14 1 1939 663074072 663076012 0.000000e+00 1999
21 TraesCS7A01G136200 chr5A 97.362 872 10 4 1707 2577 167887495 167886636 0.000000e+00 1471
22 TraesCS7A01G136200 chr3A 90.112 1426 106 13 10 1431 47783913 47785307 0.000000e+00 1820
23 TraesCS7A01G136200 chr3A 86.853 1179 112 25 1427 2571 47811215 47812384 0.000000e+00 1279
24 TraesCS7A01G136200 chr6A 85.854 1124 141 15 822 1939 53257554 53256443 0.000000e+00 1179
25 TraesCS7A01G136200 chrUn 85.549 1121 153 9 822 1939 98277487 98276373 0.000000e+00 1164
26 TraesCS7A01G136200 chrUn 87.219 978 116 7 1 972 445250994 445251968 0.000000e+00 1105
27 TraesCS7A01G136200 chr4B 88.669 353 34 5 2198 2550 104132182 104131836 2.690000e-115 425


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G136200 chr7A 88956744 88959666 2922 True 5398.0 5398 100.0000 1 2923 1 chr7A.!!$R1 2922
1 TraesCS7A01G136200 chr7A 722317465 722320044 2579 True 4676.0 4676 99.3800 1 2580 1 chr7A.!!$R3 2579
2 TraesCS7A01G136200 chr7A 255887446 255889375 1929 True 2109.0 2109 86.4410 1 1939 1 chr7A.!!$R2 1938
3 TraesCS7A01G136200 chr7A 361795548 361796668 1120 False 1559.0 1559 91.7480 842 1966 1 chr7A.!!$F1 1124
4 TraesCS7A01G136200 chr7A 362148187 362150212 2025 False 1001.5 1507 88.6225 842 2577 2 chr7A.!!$F3 1735
5 TraesCS7A01G136200 chr3D 37735948 37738145 2197 False 2937.0 2937 90.7620 10 2227 1 chr3D.!!$F1 2217
6 TraesCS7A01G136200 chr6B 610805862 610807788 1926 False 2084.0 2084 86.2350 1 1937 1 chr6B.!!$F3 1936
7 TraesCS7A01G136200 chr6B 103963362 103964472 1110 False 1122.0 1122 84.9910 822 1939 1 chr6B.!!$F2 1117
8 TraesCS7A01G136200 chr7B 574510873 574512797 1924 False 2082.0 2082 86.2000 1 1937 1 chr7B.!!$F1 1936
9 TraesCS7A01G136200 chr1A 184934502 184936442 1940 True 2082.0 2082 86.0790 1 1952 1 chr1A.!!$R1 1951
10 TraesCS7A01G136200 chr1A 379192241 379192885 644 False 1120.0 1120 97.9880 1932 2577 1 chr1A.!!$F1 645
11 TraesCS7A01G136200 chr7D 317662525 317664221 1696 True 2060.0 2060 88.5320 842 2575 1 chr7D.!!$R1 1733
12 TraesCS7A01G136200 chr5A 663074072 663076012 1940 False 1999.0 1999 85.3180 1 1939 1 chr5A.!!$F1 1938
13 TraesCS7A01G136200 chr5A 167886636 167887495 859 True 1471.0 1471 97.3620 1707 2577 1 chr5A.!!$R1 870
14 TraesCS7A01G136200 chr3A 47783913 47785307 1394 False 1820.0 1820 90.1120 10 1431 1 chr3A.!!$F1 1421
15 TraesCS7A01G136200 chr3A 47811215 47812384 1169 False 1279.0 1279 86.8530 1427 2571 1 chr3A.!!$F2 1144
16 TraesCS7A01G136200 chr6A 53256443 53257554 1111 True 1179.0 1179 85.8540 822 1939 1 chr6A.!!$R1 1117
17 TraesCS7A01G136200 chrUn 98276373 98277487 1114 True 1164.0 1164 85.5490 822 1939 1 chrUn.!!$R1 1117
18 TraesCS7A01G136200 chrUn 445250994 445251968 974 False 1105.0 1105 87.2190 1 972 1 chrUn.!!$F1 971

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
364 369 5.357314 CAGCAAGAAATGTGATTGAGAGGAT 59.643 40.0 0.0 0.0 0.0 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2203 2572 1.683917 CAGGTCAGGAAGGAGATACCG 59.316 57.143 0.0 0.0 44.74 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
364 369 5.357314 CAGCAAGAAATGTGATTGAGAGGAT 59.643 40.000 0.00 0.00 0.00 3.24
2203 2572 4.214971 CAGCAAGCATGACACCTATTATCC 59.785 45.833 0.00 0.00 0.00 2.59
2565 2971 2.625087 CCATTCCCAATCCCTCAAGCTT 60.625 50.000 0.00 0.00 0.00 3.74
2580 2986 2.208326 AGCTTCCAAACACGCTTTTG 57.792 45.000 2.96 2.96 36.40 2.44
2581 2987 1.748493 AGCTTCCAAACACGCTTTTGA 59.252 42.857 10.19 0.00 38.54 2.69
2582 2988 2.165437 AGCTTCCAAACACGCTTTTGAA 59.835 40.909 10.19 2.72 38.54 2.69
2583 2989 2.535574 GCTTCCAAACACGCTTTTGAAG 59.464 45.455 10.19 11.41 38.54 3.02
2584 2990 3.769536 CTTCCAAACACGCTTTTGAAGT 58.230 40.909 10.19 0.00 38.54 3.01
2585 2991 3.859411 TCCAAACACGCTTTTGAAGTT 57.141 38.095 10.19 0.00 38.54 2.66
2586 2992 4.181309 TCCAAACACGCTTTTGAAGTTT 57.819 36.364 10.19 0.00 38.54 2.66
2587 2993 3.923461 TCCAAACACGCTTTTGAAGTTTG 59.077 39.130 10.19 0.00 45.10 2.93
2588 2994 4.243642 CAAACACGCTTTTGAAGTTTGG 57.756 40.909 0.00 0.00 43.04 3.28
2589 2995 3.586100 AACACGCTTTTGAAGTTTGGT 57.414 38.095 0.00 0.00 0.00 3.67
2590 2996 4.705337 AACACGCTTTTGAAGTTTGGTA 57.295 36.364 0.00 0.00 0.00 3.25
2591 2997 4.023739 ACACGCTTTTGAAGTTTGGTAC 57.976 40.909 0.00 0.00 0.00 3.34
2592 2998 3.692593 ACACGCTTTTGAAGTTTGGTACT 59.307 39.130 0.00 0.00 39.32 2.73
2593 2999 4.035017 CACGCTTTTGAAGTTTGGTACTG 58.965 43.478 0.00 0.00 37.12 2.74
2594 3000 3.942748 ACGCTTTTGAAGTTTGGTACTGA 59.057 39.130 0.00 0.00 37.12 3.41
2595 3001 4.396790 ACGCTTTTGAAGTTTGGTACTGAA 59.603 37.500 0.00 0.00 37.12 3.02
2596 3002 5.067283 ACGCTTTTGAAGTTTGGTACTGAAT 59.933 36.000 0.00 0.00 37.12 2.57
2597 3003 5.977129 CGCTTTTGAAGTTTGGTACTGAATT 59.023 36.000 0.00 0.00 37.12 2.17
2598 3004 6.142320 CGCTTTTGAAGTTTGGTACTGAATTC 59.858 38.462 0.00 0.00 37.12 2.17
2599 3005 6.142320 GCTTTTGAAGTTTGGTACTGAATTCG 59.858 38.462 0.04 0.00 37.12 3.34
2600 3006 6.687081 TTTGAAGTTTGGTACTGAATTCGT 57.313 33.333 0.04 4.72 37.12 3.85
2601 3007 5.917541 TGAAGTTTGGTACTGAATTCGTC 57.082 39.130 0.04 0.00 37.12 4.20
2602 3008 4.753107 TGAAGTTTGGTACTGAATTCGTCC 59.247 41.667 0.04 6.50 37.12 4.79
2603 3009 4.618920 AGTTTGGTACTGAATTCGTCCT 57.381 40.909 0.04 0.00 35.19 3.85
2604 3010 4.566987 AGTTTGGTACTGAATTCGTCCTC 58.433 43.478 0.04 0.00 35.19 3.71
2605 3011 2.933495 TGGTACTGAATTCGTCCTCG 57.067 50.000 0.04 0.00 38.55 4.63
2606 3012 2.165167 TGGTACTGAATTCGTCCTCGT 58.835 47.619 0.04 0.00 38.33 4.18
2607 3013 2.559668 TGGTACTGAATTCGTCCTCGTT 59.440 45.455 0.04 0.00 38.33 3.85
2608 3014 3.006110 TGGTACTGAATTCGTCCTCGTTT 59.994 43.478 0.04 0.00 38.33 3.60
2609 3015 3.611549 GGTACTGAATTCGTCCTCGTTTC 59.388 47.826 0.04 0.00 38.33 2.78
2610 3016 2.325761 ACTGAATTCGTCCTCGTTTCG 58.674 47.619 0.04 0.00 38.33 3.46
2611 3017 1.654105 CTGAATTCGTCCTCGTTTCGG 59.346 52.381 0.04 0.00 38.33 4.30
2612 3018 1.000060 TGAATTCGTCCTCGTTTCGGT 60.000 47.619 0.04 0.00 38.33 4.69
2613 3019 1.389106 GAATTCGTCCTCGTTTCGGTG 59.611 52.381 0.00 0.00 38.33 4.94
2614 3020 1.012486 ATTCGTCCTCGTTTCGGTGC 61.012 55.000 0.00 0.00 38.33 5.01
2615 3021 3.110178 CGTCCTCGTTTCGGTGCC 61.110 66.667 0.00 0.00 0.00 5.01
2616 3022 2.029964 GTCCTCGTTTCGGTGCCA 59.970 61.111 0.00 0.00 0.00 4.92
2617 3023 1.595929 GTCCTCGTTTCGGTGCCAA 60.596 57.895 0.00 0.00 0.00 4.52
2618 3024 0.953960 GTCCTCGTTTCGGTGCCAAT 60.954 55.000 0.00 0.00 0.00 3.16
2619 3025 0.250553 TCCTCGTTTCGGTGCCAATT 60.251 50.000 0.00 0.00 0.00 2.32
2620 3026 0.596082 CCTCGTTTCGGTGCCAATTT 59.404 50.000 0.00 0.00 0.00 1.82
2621 3027 1.665735 CCTCGTTTCGGTGCCAATTTG 60.666 52.381 0.00 0.00 0.00 2.32
2622 3028 1.001815 CTCGTTTCGGTGCCAATTTGT 60.002 47.619 0.00 0.00 0.00 2.83
2623 3029 2.219458 TCGTTTCGGTGCCAATTTGTA 58.781 42.857 0.00 0.00 0.00 2.41
2624 3030 2.814919 TCGTTTCGGTGCCAATTTGTAT 59.185 40.909 0.00 0.00 0.00 2.29
2625 3031 3.253677 TCGTTTCGGTGCCAATTTGTATT 59.746 39.130 0.00 0.00 0.00 1.89
2626 3032 3.984633 CGTTTCGGTGCCAATTTGTATTT 59.015 39.130 0.00 0.00 0.00 1.40
2627 3033 4.446051 CGTTTCGGTGCCAATTTGTATTTT 59.554 37.500 0.00 0.00 0.00 1.82
2628 3034 5.387958 CGTTTCGGTGCCAATTTGTATTTTC 60.388 40.000 0.00 0.00 0.00 2.29
2629 3035 5.461032 TTCGGTGCCAATTTGTATTTTCT 57.539 34.783 0.00 0.00 0.00 2.52
2630 3036 5.054390 TCGGTGCCAATTTGTATTTTCTC 57.946 39.130 0.00 0.00 0.00 2.87
2631 3037 4.520874 TCGGTGCCAATTTGTATTTTCTCA 59.479 37.500 0.00 0.00 0.00 3.27
2632 3038 5.184864 TCGGTGCCAATTTGTATTTTCTCAT 59.815 36.000 0.00 0.00 0.00 2.90
2633 3039 5.516339 CGGTGCCAATTTGTATTTTCTCATC 59.484 40.000 0.00 0.00 0.00 2.92
2634 3040 5.516339 GGTGCCAATTTGTATTTTCTCATCG 59.484 40.000 0.00 0.00 0.00 3.84
2635 3041 6.321717 GTGCCAATTTGTATTTTCTCATCGA 58.678 36.000 0.00 0.00 0.00 3.59
2636 3042 6.974622 GTGCCAATTTGTATTTTCTCATCGAT 59.025 34.615 0.00 0.00 0.00 3.59
2637 3043 7.489113 GTGCCAATTTGTATTTTCTCATCGATT 59.511 33.333 0.00 0.00 0.00 3.34
2638 3044 8.034215 TGCCAATTTGTATTTTCTCATCGATTT 58.966 29.630 0.00 0.00 0.00 2.17
2639 3045 8.872845 GCCAATTTGTATTTTCTCATCGATTTT 58.127 29.630 0.00 0.00 0.00 1.82
2668 3074 9.653287 TTACTATCTTGTTCATCGATTTGTTCT 57.347 29.630 0.00 0.00 0.00 3.01
2669 3075 8.553459 ACTATCTTGTTCATCGATTTGTTCTT 57.447 30.769 0.00 0.00 0.00 2.52
2670 3076 8.446273 ACTATCTTGTTCATCGATTTGTTCTTG 58.554 33.333 0.00 0.00 0.00 3.02
2671 3077 6.000891 TCTTGTTCATCGATTTGTTCTTGG 57.999 37.500 0.00 0.00 0.00 3.61
2672 3078 4.764679 TGTTCATCGATTTGTTCTTGGG 57.235 40.909 0.00 0.00 0.00 4.12
2673 3079 4.141287 TGTTCATCGATTTGTTCTTGGGT 58.859 39.130 0.00 0.00 0.00 4.51
2674 3080 4.582656 TGTTCATCGATTTGTTCTTGGGTT 59.417 37.500 0.00 0.00 0.00 4.11
2675 3081 5.154222 GTTCATCGATTTGTTCTTGGGTTC 58.846 41.667 0.00 0.00 0.00 3.62
2676 3082 4.651778 TCATCGATTTGTTCTTGGGTTCT 58.348 39.130 0.00 0.00 0.00 3.01
2677 3083 4.455533 TCATCGATTTGTTCTTGGGTTCTG 59.544 41.667 0.00 0.00 0.00 3.02
2678 3084 3.815809 TCGATTTGTTCTTGGGTTCTGT 58.184 40.909 0.00 0.00 0.00 3.41
2679 3085 3.813166 TCGATTTGTTCTTGGGTTCTGTC 59.187 43.478 0.00 0.00 0.00 3.51
2680 3086 3.563808 CGATTTGTTCTTGGGTTCTGTCA 59.436 43.478 0.00 0.00 0.00 3.58
2681 3087 4.554723 CGATTTGTTCTTGGGTTCTGTCAC 60.555 45.833 0.00 0.00 0.00 3.67
2682 3088 3.644966 TTGTTCTTGGGTTCTGTCACT 57.355 42.857 0.00 0.00 0.00 3.41
2683 3089 2.917933 TGTTCTTGGGTTCTGTCACTG 58.082 47.619 0.00 0.00 0.00 3.66
2684 3090 1.604278 GTTCTTGGGTTCTGTCACTGC 59.396 52.381 0.00 0.00 0.00 4.40
2685 3091 1.131638 TCTTGGGTTCTGTCACTGCT 58.868 50.000 0.00 0.00 0.00 4.24
2686 3092 1.070758 TCTTGGGTTCTGTCACTGCTC 59.929 52.381 0.00 0.00 0.00 4.26
2687 3093 0.108585 TTGGGTTCTGTCACTGCTCC 59.891 55.000 0.00 0.00 0.00 4.70
2688 3094 1.003233 GGGTTCTGTCACTGCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
2689 3095 1.484444 GGGTTCTGTCACTGCTCCCT 61.484 60.000 6.72 0.00 0.00 4.20
2690 3096 0.321122 GGTTCTGTCACTGCTCCCTG 60.321 60.000 0.00 0.00 0.00 4.45
2691 3097 0.952984 GTTCTGTCACTGCTCCCTGC 60.953 60.000 0.00 0.00 43.25 4.85
2701 3107 4.864334 CTCCCTGCACGGCCATCC 62.864 72.222 2.24 0.00 0.00 3.51
2711 3117 3.732470 GGCCATCCGAATCCGTTC 58.268 61.111 0.00 0.00 0.00 3.95
2712 3118 1.153249 GGCCATCCGAATCCGTTCA 60.153 57.895 0.00 0.00 33.86 3.18
2713 3119 1.436983 GGCCATCCGAATCCGTTCAC 61.437 60.000 0.00 0.00 33.86 3.18
2714 3120 1.436983 GCCATCCGAATCCGTTCACC 61.437 60.000 0.00 0.00 33.86 4.02
2715 3121 1.151777 CCATCCGAATCCGTTCACCG 61.152 60.000 0.00 0.00 33.86 4.94
2716 3122 1.520787 ATCCGAATCCGTTCACCGC 60.521 57.895 0.00 0.00 33.86 5.68
2717 3123 2.918230 ATCCGAATCCGTTCACCGCC 62.918 60.000 0.00 0.00 33.86 6.13
2718 3124 2.125673 CGAATCCGTTCACCGCCT 60.126 61.111 0.00 0.00 33.86 5.52
2719 3125 2.165301 CGAATCCGTTCACCGCCTC 61.165 63.158 0.00 0.00 33.86 4.70
2720 3126 1.218316 GAATCCGTTCACCGCCTCT 59.782 57.895 0.00 0.00 34.41 3.69
2721 3127 1.079127 AATCCGTTCACCGCCTCTG 60.079 57.895 0.00 0.00 34.38 3.35
2722 3128 1.827399 AATCCGTTCACCGCCTCTGT 61.827 55.000 0.00 0.00 34.38 3.41
2723 3129 2.227089 ATCCGTTCACCGCCTCTGTC 62.227 60.000 0.00 0.00 34.38 3.51
2724 3130 2.338620 CGTTCACCGCCTCTGTCA 59.661 61.111 0.00 0.00 0.00 3.58
2725 3131 2.022129 CGTTCACCGCCTCTGTCAC 61.022 63.158 0.00 0.00 0.00 3.67
2726 3132 1.367840 GTTCACCGCCTCTGTCACT 59.632 57.895 0.00 0.00 0.00 3.41
2727 3133 0.946221 GTTCACCGCCTCTGTCACTG 60.946 60.000 0.00 0.00 0.00 3.66
2728 3134 2.715532 TTCACCGCCTCTGTCACTGC 62.716 60.000 0.00 0.00 0.00 4.40
2729 3135 2.919856 ACCGCCTCTGTCACTGCT 60.920 61.111 0.00 0.00 0.00 4.24
2730 3136 2.125753 CCGCCTCTGTCACTGCTC 60.126 66.667 0.00 0.00 0.00 4.26
2731 3137 2.125753 CGCCTCTGTCACTGCTCC 60.126 66.667 0.00 0.00 0.00 4.70
2732 3138 2.267324 GCCTCTGTCACTGCTCCC 59.733 66.667 0.00 0.00 0.00 4.30
2733 3139 2.289532 GCCTCTGTCACTGCTCCCT 61.290 63.158 0.00 0.00 0.00 4.20
2734 3140 1.595882 CCTCTGTCACTGCTCCCTG 59.404 63.158 0.00 0.00 0.00 4.45
2735 3141 1.079266 CTCTGTCACTGCTCCCTGC 60.079 63.158 0.00 0.00 43.25 4.85
2736 3142 1.534959 TCTGTCACTGCTCCCTGCT 60.535 57.895 0.00 0.00 43.37 4.24
2737 3143 1.123861 TCTGTCACTGCTCCCTGCTT 61.124 55.000 0.00 0.00 43.37 3.91
2738 3144 0.673022 CTGTCACTGCTCCCTGCTTC 60.673 60.000 0.00 0.00 43.37 3.86
2739 3145 1.123861 TGTCACTGCTCCCTGCTTCT 61.124 55.000 0.00 0.00 43.37 2.85
2740 3146 0.673022 GTCACTGCTCCCTGCTTCTG 60.673 60.000 0.00 0.00 43.37 3.02
2741 3147 2.039405 CACTGCTCCCTGCTTCTGC 61.039 63.158 0.00 0.00 43.37 4.26
2742 3148 2.222727 ACTGCTCCCTGCTTCTGCT 61.223 57.895 0.00 0.00 43.37 4.24
2743 3149 1.745864 CTGCTCCCTGCTTCTGCTG 60.746 63.158 0.00 0.00 43.37 4.41
2744 3150 3.132801 GCTCCCTGCTTCTGCTGC 61.133 66.667 0.00 0.00 40.48 5.25
2745 3151 2.350134 CTCCCTGCTTCTGCTGCA 59.650 61.111 0.88 0.88 40.48 4.41
2746 3152 1.077644 CTCCCTGCTTCTGCTGCAT 60.078 57.895 1.31 0.00 39.86 3.96
2747 3153 1.077930 TCCCTGCTTCTGCTGCATC 60.078 57.895 1.31 0.00 39.86 3.91
2748 3154 1.378119 CCCTGCTTCTGCTGCATCA 60.378 57.895 1.31 0.00 39.86 3.07
2749 3155 1.377366 CCCTGCTTCTGCTGCATCAG 61.377 60.000 11.37 11.37 39.86 2.90
2750 3156 1.377366 CCTGCTTCTGCTGCATCAGG 61.377 60.000 17.06 18.82 39.86 3.86
2751 3157 0.392595 CTGCTTCTGCTGCATCAGGA 60.393 55.000 17.06 8.08 39.86 3.86
2752 3158 0.037160 TGCTTCTGCTGCATCAGGAA 59.963 50.000 17.06 9.33 40.48 3.36
2753 3159 0.450983 GCTTCTGCTGCATCAGGAAC 59.549 55.000 17.06 0.29 34.91 3.62
2754 3160 0.725686 CTTCTGCTGCATCAGGAACG 59.274 55.000 17.06 0.00 34.91 3.95
2755 3161 1.300971 TTCTGCTGCATCAGGAACGC 61.301 55.000 17.06 0.31 34.91 4.84
2756 3162 2.032376 TGCTGCATCAGGAACGCA 59.968 55.556 0.00 0.00 31.21 5.24
2757 3163 1.579964 CTGCTGCATCAGGAACGCAA 61.580 55.000 9.75 0.00 34.75 4.85
2758 3164 1.154150 GCTGCATCAGGAACGCAAC 60.154 57.895 0.00 0.00 34.75 4.17
2759 3165 1.133253 CTGCATCAGGAACGCAACG 59.867 57.895 0.00 0.00 34.75 4.10
2760 3166 2.202349 GCATCAGGAACGCAACGC 60.202 61.111 0.00 0.00 0.00 4.84
2761 3167 2.965147 GCATCAGGAACGCAACGCA 61.965 57.895 0.00 0.00 0.00 5.24
2762 3168 1.573932 CATCAGGAACGCAACGCAA 59.426 52.632 0.00 0.00 0.00 4.85
2763 3169 0.168788 CATCAGGAACGCAACGCAAT 59.831 50.000 0.00 0.00 0.00 3.56
2764 3170 1.396648 CATCAGGAACGCAACGCAATA 59.603 47.619 0.00 0.00 0.00 1.90
2765 3171 0.793861 TCAGGAACGCAACGCAATAC 59.206 50.000 0.00 0.00 0.00 1.89
2766 3172 0.515127 CAGGAACGCAACGCAATACA 59.485 50.000 0.00 0.00 0.00 2.29
2767 3173 1.069568 CAGGAACGCAACGCAATACAA 60.070 47.619 0.00 0.00 0.00 2.41
2768 3174 1.810151 AGGAACGCAACGCAATACAAT 59.190 42.857 0.00 0.00 0.00 2.71
2769 3175 1.910819 GGAACGCAACGCAATACAATG 59.089 47.619 0.00 0.00 0.00 2.82
2770 3176 1.910819 GAACGCAACGCAATACAATGG 59.089 47.619 0.00 0.00 0.00 3.16
2771 3177 0.455972 ACGCAACGCAATACAATGGC 60.456 50.000 0.00 0.00 0.00 4.40
2772 3178 1.139226 CGCAACGCAATACAATGGCC 61.139 55.000 0.00 0.00 0.00 5.36
2773 3179 1.139226 GCAACGCAATACAATGGCCG 61.139 55.000 0.00 0.00 0.00 6.13
2774 3180 0.449786 CAACGCAATACAATGGCCGA 59.550 50.000 0.00 0.00 0.00 5.54
2775 3181 0.450184 AACGCAATACAATGGCCGAC 59.550 50.000 0.00 0.00 0.00 4.79
2776 3182 1.011242 CGCAATACAATGGCCGACG 60.011 57.895 0.00 0.00 0.00 5.12
2777 3183 1.425267 CGCAATACAATGGCCGACGA 61.425 55.000 0.00 0.00 0.00 4.20
2778 3184 0.027586 GCAATACAATGGCCGACGAC 59.972 55.000 0.00 0.00 0.00 4.34
2779 3185 0.655733 CAATACAATGGCCGACGACC 59.344 55.000 0.00 0.00 0.00 4.79
2780 3186 0.250793 AATACAATGGCCGACGACCA 59.749 50.000 5.02 5.02 42.61 4.02
2781 3187 0.461339 ATACAATGGCCGACGACCAC 60.461 55.000 4.55 0.00 40.82 4.16
2782 3188 1.817911 TACAATGGCCGACGACCACA 61.818 55.000 4.55 0.00 40.82 4.17
2783 3189 1.745115 CAATGGCCGACGACCACAT 60.745 57.895 4.55 0.00 40.82 3.21
2784 3190 1.449601 AATGGCCGACGACCACATC 60.450 57.895 4.55 0.00 40.82 3.06
2785 3191 2.178876 AATGGCCGACGACCACATCA 62.179 55.000 4.55 0.00 40.82 3.07
2786 3192 2.509336 GGCCGACGACCACATCAG 60.509 66.667 0.00 0.00 0.00 2.90
2787 3193 2.571757 GCCGACGACCACATCAGA 59.428 61.111 0.00 0.00 0.00 3.27
2788 3194 1.141881 GCCGACGACCACATCAGAT 59.858 57.895 0.00 0.00 0.00 2.90
2789 3195 0.872021 GCCGACGACCACATCAGATC 60.872 60.000 0.00 0.00 0.00 2.75
2790 3196 0.455815 CCGACGACCACATCAGATCA 59.544 55.000 0.00 0.00 0.00 2.92
2791 3197 1.550065 CGACGACCACATCAGATCAC 58.450 55.000 0.00 0.00 0.00 3.06
2792 3198 1.135402 CGACGACCACATCAGATCACA 60.135 52.381 0.00 0.00 0.00 3.58
2793 3199 2.534298 GACGACCACATCAGATCACAG 58.466 52.381 0.00 0.00 0.00 3.66
2794 3200 1.205655 ACGACCACATCAGATCACAGG 59.794 52.381 0.00 0.00 0.00 4.00
2795 3201 1.205655 CGACCACATCAGATCACAGGT 59.794 52.381 0.00 0.00 0.00 4.00
2796 3202 2.736719 CGACCACATCAGATCACAGGTC 60.737 54.545 0.00 0.00 40.39 3.85
2797 3203 2.234661 GACCACATCAGATCACAGGTCA 59.765 50.000 12.21 0.00 42.65 4.02
2798 3204 2.842496 ACCACATCAGATCACAGGTCAT 59.158 45.455 0.00 0.00 0.00 3.06
2799 3205 4.033009 ACCACATCAGATCACAGGTCATA 58.967 43.478 0.00 0.00 0.00 2.15
2800 3206 4.657504 ACCACATCAGATCACAGGTCATAT 59.342 41.667 0.00 0.00 0.00 1.78
2801 3207 5.221601 ACCACATCAGATCACAGGTCATATC 60.222 44.000 0.00 0.00 0.00 1.63
2802 3208 5.236282 CACATCAGATCACAGGTCATATCC 58.764 45.833 0.00 0.00 0.00 2.59
2803 3209 4.285517 ACATCAGATCACAGGTCATATCCC 59.714 45.833 0.00 0.00 0.00 3.85
2804 3210 3.242867 TCAGATCACAGGTCATATCCCC 58.757 50.000 0.00 0.00 0.00 4.81
2805 3211 2.028658 CAGATCACAGGTCATATCCCCG 60.029 54.545 0.00 0.00 0.00 5.73
2806 3212 1.971357 GATCACAGGTCATATCCCCGT 59.029 52.381 0.00 0.00 0.00 5.28
2807 3213 2.759839 TCACAGGTCATATCCCCGTA 57.240 50.000 0.00 0.00 0.00 4.02
2808 3214 3.254093 TCACAGGTCATATCCCCGTAT 57.746 47.619 0.00 0.00 0.00 3.06
2809 3215 4.391683 TCACAGGTCATATCCCCGTATA 57.608 45.455 0.00 0.00 0.00 1.47
2810 3216 4.942944 TCACAGGTCATATCCCCGTATAT 58.057 43.478 0.00 0.00 0.00 0.86
2811 3217 6.082228 TCACAGGTCATATCCCCGTATATA 57.918 41.667 0.00 0.00 0.00 0.86
2812 3218 6.495847 TCACAGGTCATATCCCCGTATATAA 58.504 40.000 0.00 0.00 0.00 0.98
2813 3219 6.379133 TCACAGGTCATATCCCCGTATATAAC 59.621 42.308 0.00 0.00 0.00 1.89
2814 3220 5.659971 ACAGGTCATATCCCCGTATATAACC 59.340 44.000 0.00 0.00 0.00 2.85
2815 3221 5.070047 CAGGTCATATCCCCGTATATAACCC 59.930 48.000 0.00 0.00 0.00 4.11
2816 3222 4.346127 GGTCATATCCCCGTATATAACCCC 59.654 50.000 0.00 0.00 0.00 4.95
2817 3223 4.964262 GTCATATCCCCGTATATAACCCCA 59.036 45.833 0.00 0.00 0.00 4.96
2818 3224 5.070047 GTCATATCCCCGTATATAACCCCAG 59.930 48.000 0.00 0.00 0.00 4.45
2819 3225 1.648116 TCCCCGTATATAACCCCAGC 58.352 55.000 0.00 0.00 0.00 4.85
2820 3226 0.616891 CCCCGTATATAACCCCAGCC 59.383 60.000 0.00 0.00 0.00 4.85
2821 3227 1.354101 CCCGTATATAACCCCAGCCA 58.646 55.000 0.00 0.00 0.00 4.75
2822 3228 1.278127 CCCGTATATAACCCCAGCCAG 59.722 57.143 0.00 0.00 0.00 4.85
2823 3229 1.338769 CCGTATATAACCCCAGCCAGC 60.339 57.143 0.00 0.00 0.00 4.85
2824 3230 1.671850 CGTATATAACCCCAGCCAGCG 60.672 57.143 0.00 0.00 0.00 5.18
2825 3231 0.323629 TATATAACCCCAGCCAGCGC 59.676 55.000 0.00 0.00 0.00 5.92
2826 3232 1.705002 ATATAACCCCAGCCAGCGCA 61.705 55.000 11.47 0.00 37.52 6.09
2827 3233 1.916206 TATAACCCCAGCCAGCGCAA 61.916 55.000 11.47 0.00 37.52 4.85
2828 3234 3.792588 TATAACCCCAGCCAGCGCAAG 62.793 57.143 11.47 0.00 37.52 4.01
2830 3236 4.408821 CCCCAGCCAGCGCAAGTA 62.409 66.667 11.47 0.00 41.68 2.24
2831 3237 2.359850 CCCAGCCAGCGCAAGTAA 60.360 61.111 11.47 0.00 41.68 2.24
2832 3238 1.971167 CCCAGCCAGCGCAAGTAAA 60.971 57.895 11.47 0.00 41.68 2.01
2833 3239 1.210155 CCAGCCAGCGCAAGTAAAC 59.790 57.895 11.47 0.00 41.68 2.01
2834 3240 1.514678 CCAGCCAGCGCAAGTAAACA 61.515 55.000 11.47 0.00 41.68 2.83
2835 3241 0.385974 CAGCCAGCGCAAGTAAACAC 60.386 55.000 11.47 0.00 41.68 3.32
2836 3242 0.817634 AGCCAGCGCAAGTAAACACA 60.818 50.000 11.47 0.00 41.68 3.72
2837 3243 0.030101 GCCAGCGCAAGTAAACACAA 59.970 50.000 11.47 0.00 41.68 3.33
2838 3244 1.925946 GCCAGCGCAAGTAAACACAAG 60.926 52.381 11.47 0.00 41.68 3.16
2839 3245 1.334960 CCAGCGCAAGTAAACACAAGG 60.335 52.381 11.47 0.00 41.68 3.61
2840 3246 1.601903 CAGCGCAAGTAAACACAAGGA 59.398 47.619 11.47 0.00 41.68 3.36
2841 3247 1.873591 AGCGCAAGTAAACACAAGGAG 59.126 47.619 11.47 0.00 41.68 3.69
2842 3248 1.069227 GCGCAAGTAAACACAAGGAGG 60.069 52.381 0.30 0.00 41.68 4.30
2843 3249 1.069227 CGCAAGTAAACACAAGGAGGC 60.069 52.381 0.00 0.00 0.00 4.70
2844 3250 1.953686 GCAAGTAAACACAAGGAGGCA 59.046 47.619 0.00 0.00 0.00 4.75
2845 3251 2.030805 GCAAGTAAACACAAGGAGGCAG 60.031 50.000 0.00 0.00 0.00 4.85
2846 3252 1.897560 AGTAAACACAAGGAGGCAGC 58.102 50.000 0.00 0.00 0.00 5.25
2847 3253 0.881796 GTAAACACAAGGAGGCAGCC 59.118 55.000 1.84 1.84 0.00 4.85
2848 3254 0.476338 TAAACACAAGGAGGCAGCCA 59.524 50.000 15.80 0.00 0.00 4.75
2849 3255 1.109323 AAACACAAGGAGGCAGCCAC 61.109 55.000 15.80 7.41 0.00 5.01
2850 3256 3.052082 CACAAGGAGGCAGCCACG 61.052 66.667 15.80 0.00 0.00 4.94
2851 3257 4.335647 ACAAGGAGGCAGCCACGG 62.336 66.667 15.80 6.75 0.00 4.94
2852 3258 4.020617 CAAGGAGGCAGCCACGGA 62.021 66.667 15.80 0.00 0.00 4.69
2853 3259 3.710722 AAGGAGGCAGCCACGGAG 61.711 66.667 15.80 0.00 0.00 4.63
2854 3260 4.704103 AGGAGGCAGCCACGGAGA 62.704 66.667 15.80 0.00 0.00 3.71
2855 3261 3.706373 GGAGGCAGCCACGGAGAA 61.706 66.667 15.80 0.00 0.00 2.87
2856 3262 2.586792 GAGGCAGCCACGGAGAAT 59.413 61.111 15.80 0.00 0.00 2.40
2857 3263 1.078143 GAGGCAGCCACGGAGAATT 60.078 57.895 15.80 0.00 0.00 2.17
2858 3264 0.178068 GAGGCAGCCACGGAGAATTA 59.822 55.000 15.80 0.00 0.00 1.40
2859 3265 0.839946 AGGCAGCCACGGAGAATTAT 59.160 50.000 15.80 0.00 0.00 1.28
2860 3266 1.212935 AGGCAGCCACGGAGAATTATT 59.787 47.619 15.80 0.00 0.00 1.40
2861 3267 1.334869 GGCAGCCACGGAGAATTATTG 59.665 52.381 6.55 0.00 0.00 1.90
2862 3268 2.017049 GCAGCCACGGAGAATTATTGT 58.983 47.619 0.00 0.00 0.00 2.71
2863 3269 2.423538 GCAGCCACGGAGAATTATTGTT 59.576 45.455 0.00 0.00 0.00 2.83
2864 3270 3.625764 GCAGCCACGGAGAATTATTGTTA 59.374 43.478 0.00 0.00 0.00 2.41
2865 3271 4.495844 GCAGCCACGGAGAATTATTGTTAC 60.496 45.833 0.00 0.00 0.00 2.50
2866 3272 4.634004 CAGCCACGGAGAATTATTGTTACA 59.366 41.667 0.00 0.00 0.00 2.41
2867 3273 4.876107 AGCCACGGAGAATTATTGTTACAG 59.124 41.667 0.00 0.00 0.00 2.74
2868 3274 4.634443 GCCACGGAGAATTATTGTTACAGT 59.366 41.667 0.00 0.00 0.00 3.55
2869 3275 5.813672 GCCACGGAGAATTATTGTTACAGTA 59.186 40.000 0.00 0.00 0.00 2.74
2870 3276 6.314400 GCCACGGAGAATTATTGTTACAGTAA 59.686 38.462 2.93 2.93 0.00 2.24
2871 3277 7.012044 GCCACGGAGAATTATTGTTACAGTAAT 59.988 37.037 7.20 7.20 29.66 1.89
2872 3278 8.889717 CCACGGAGAATTATTGTTACAGTAATT 58.110 33.333 20.52 20.52 38.38 1.40
2873 3279 9.916397 CACGGAGAATTATTGTTACAGTAATTC 57.084 33.333 29.53 29.53 45.17 2.17
2890 3296 8.504005 ACAGTAATTCTATTGTTTCGTTTCAGG 58.496 33.333 0.00 0.00 0.00 3.86
2891 3297 7.481798 CAGTAATTCTATTGTTTCGTTTCAGGC 59.518 37.037 0.00 0.00 0.00 4.85
2892 3298 5.957842 ATTCTATTGTTTCGTTTCAGGCA 57.042 34.783 0.00 0.00 0.00 4.75
2893 3299 5.356882 TTCTATTGTTTCGTTTCAGGCAG 57.643 39.130 0.00 0.00 0.00 4.85
2894 3300 4.637276 TCTATTGTTTCGTTTCAGGCAGA 58.363 39.130 0.00 0.00 0.00 4.26
2895 3301 3.904136 ATTGTTTCGTTTCAGGCAGAG 57.096 42.857 0.00 0.00 0.00 3.35
2896 3302 1.593196 TGTTTCGTTTCAGGCAGAGG 58.407 50.000 0.00 0.00 0.00 3.69
2897 3303 1.134220 TGTTTCGTTTCAGGCAGAGGT 60.134 47.619 0.00 0.00 0.00 3.85
2898 3304 2.103432 TGTTTCGTTTCAGGCAGAGGTA 59.897 45.455 0.00 0.00 0.00 3.08
2899 3305 2.450609 TTCGTTTCAGGCAGAGGTAC 57.549 50.000 0.00 0.00 0.00 3.34
2901 3307 1.968493 TCGTTTCAGGCAGAGGTACTT 59.032 47.619 0.00 0.00 41.55 2.24
2902 3308 2.069273 CGTTTCAGGCAGAGGTACTTG 58.931 52.381 0.00 0.00 41.55 3.16
2903 3309 2.427506 GTTTCAGGCAGAGGTACTTGG 58.572 52.381 0.00 0.00 41.55 3.61
2904 3310 2.024176 TTCAGGCAGAGGTACTTGGA 57.976 50.000 0.00 0.00 41.55 3.53
2905 3311 2.024176 TCAGGCAGAGGTACTTGGAA 57.976 50.000 0.00 0.00 41.55 3.53
2906 3312 2.334977 TCAGGCAGAGGTACTTGGAAA 58.665 47.619 0.00 0.00 41.55 3.13
2907 3313 2.708861 TCAGGCAGAGGTACTTGGAAAA 59.291 45.455 0.00 0.00 41.55 2.29
2908 3314 3.330701 TCAGGCAGAGGTACTTGGAAAAT 59.669 43.478 0.00 0.00 41.55 1.82
2909 3315 3.691609 CAGGCAGAGGTACTTGGAAAATC 59.308 47.826 0.00 0.00 41.55 2.17
2910 3316 3.017442 GGCAGAGGTACTTGGAAAATCC 58.983 50.000 0.00 0.00 41.55 3.01
2911 3317 3.561313 GGCAGAGGTACTTGGAAAATCCA 60.561 47.826 0.00 0.00 46.61 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
364 369 6.429624 CATCGCATCTTGAATAATCCGAAAA 58.570 36.000 0.00 0.00 0.00 2.29
1651 1685 2.172505 TCCTGTTCTGCTTCCAAGAACA 59.827 45.455 15.87 15.87 46.30 3.18
2203 2572 1.683917 CAGGTCAGGAAGGAGATACCG 59.316 57.143 0.00 0.00 44.74 4.02
2565 2971 3.859411 AACTTCAAAAGCGTGTTTGGA 57.141 38.095 11.44 4.09 38.72 3.53
2580 2986 4.995487 AGGACGAATTCAGTACCAAACTTC 59.005 41.667 6.22 0.00 35.76 3.01
2581 2987 4.969484 AGGACGAATTCAGTACCAAACTT 58.031 39.130 6.22 0.00 35.76 2.66
2582 2988 4.566987 GAGGACGAATTCAGTACCAAACT 58.433 43.478 6.22 0.00 39.81 2.66
2583 2989 3.367025 CGAGGACGAATTCAGTACCAAAC 59.633 47.826 6.22 0.00 42.66 2.93
2584 2990 3.006110 ACGAGGACGAATTCAGTACCAAA 59.994 43.478 6.22 0.00 42.66 3.28
2585 2991 2.559668 ACGAGGACGAATTCAGTACCAA 59.440 45.455 6.22 0.00 42.66 3.67
2586 2992 2.165167 ACGAGGACGAATTCAGTACCA 58.835 47.619 6.22 0.00 42.66 3.25
2587 2993 2.935481 ACGAGGACGAATTCAGTACC 57.065 50.000 6.22 8.06 42.66 3.34
2588 2994 3.300066 CGAAACGAGGACGAATTCAGTAC 59.700 47.826 6.22 5.49 42.66 2.73
2589 2995 3.495193 CGAAACGAGGACGAATTCAGTA 58.505 45.455 6.22 0.00 42.66 2.74
2590 2996 2.325761 CGAAACGAGGACGAATTCAGT 58.674 47.619 6.22 4.50 42.66 3.41
2591 2997 1.654105 CCGAAACGAGGACGAATTCAG 59.346 52.381 6.22 1.11 42.66 3.02
2592 2998 1.000060 ACCGAAACGAGGACGAATTCA 60.000 47.619 6.22 0.00 42.66 2.57
2593 2999 1.389106 CACCGAAACGAGGACGAATTC 59.611 52.381 0.00 0.00 42.66 2.17
2594 3000 1.425412 CACCGAAACGAGGACGAATT 58.575 50.000 0.00 0.00 42.66 2.17
2595 3001 1.012486 GCACCGAAACGAGGACGAAT 61.012 55.000 0.00 0.00 42.66 3.34
2596 3002 1.662446 GCACCGAAACGAGGACGAA 60.662 57.895 0.00 0.00 42.66 3.85
2597 3003 2.049802 GCACCGAAACGAGGACGA 60.050 61.111 0.00 0.00 42.66 4.20
2598 3004 3.110178 GGCACCGAAACGAGGACG 61.110 66.667 0.00 0.00 45.75 4.79
2599 3005 0.953960 ATTGGCACCGAAACGAGGAC 60.954 55.000 0.00 0.00 0.00 3.85
2600 3006 0.250553 AATTGGCACCGAAACGAGGA 60.251 50.000 0.00 0.00 0.00 3.71
2601 3007 0.596082 AAATTGGCACCGAAACGAGG 59.404 50.000 0.00 0.00 0.00 4.63
2602 3008 1.001815 ACAAATTGGCACCGAAACGAG 60.002 47.619 0.00 0.00 0.00 4.18
2603 3009 1.025812 ACAAATTGGCACCGAAACGA 58.974 45.000 0.00 0.00 0.00 3.85
2604 3010 2.690173 TACAAATTGGCACCGAAACG 57.310 45.000 0.00 0.00 0.00 3.60
2605 3011 5.694458 AGAAAATACAAATTGGCACCGAAAC 59.306 36.000 0.00 0.00 0.00 2.78
2606 3012 5.848406 AGAAAATACAAATTGGCACCGAAA 58.152 33.333 0.00 0.00 0.00 3.46
2607 3013 5.010112 TGAGAAAATACAAATTGGCACCGAA 59.990 36.000 0.00 0.00 0.00 4.30
2608 3014 4.520874 TGAGAAAATACAAATTGGCACCGA 59.479 37.500 0.00 0.00 0.00 4.69
2609 3015 4.804108 TGAGAAAATACAAATTGGCACCG 58.196 39.130 0.00 0.00 0.00 4.94
2610 3016 5.516339 CGATGAGAAAATACAAATTGGCACC 59.484 40.000 0.00 0.00 0.00 5.01
2611 3017 6.321717 TCGATGAGAAAATACAAATTGGCAC 58.678 36.000 0.00 0.00 0.00 5.01
2612 3018 6.507958 TCGATGAGAAAATACAAATTGGCA 57.492 33.333 0.00 0.00 0.00 4.92
2613 3019 7.992180 AATCGATGAGAAAATACAAATTGGC 57.008 32.000 0.00 0.00 0.00 4.52
2642 3048 9.653287 AGAACAAATCGATGAACAAGATAGTAA 57.347 29.630 0.00 0.00 0.00 2.24
2643 3049 9.653287 AAGAACAAATCGATGAACAAGATAGTA 57.347 29.630 0.00 0.00 0.00 1.82
2644 3050 8.446273 CAAGAACAAATCGATGAACAAGATAGT 58.554 33.333 0.00 0.00 0.00 2.12
2645 3051 7.907045 CCAAGAACAAATCGATGAACAAGATAG 59.093 37.037 0.00 0.00 0.00 2.08
2646 3052 7.148255 CCCAAGAACAAATCGATGAACAAGATA 60.148 37.037 0.00 0.00 0.00 1.98
2647 3053 6.349611 CCCAAGAACAAATCGATGAACAAGAT 60.350 38.462 0.00 0.00 0.00 2.40
2648 3054 5.048782 CCCAAGAACAAATCGATGAACAAGA 60.049 40.000 0.00 0.00 0.00 3.02
2649 3055 5.156355 CCCAAGAACAAATCGATGAACAAG 58.844 41.667 0.00 0.00 0.00 3.16
2650 3056 4.582656 ACCCAAGAACAAATCGATGAACAA 59.417 37.500 0.00 0.00 0.00 2.83
2651 3057 4.141287 ACCCAAGAACAAATCGATGAACA 58.859 39.130 0.00 0.00 0.00 3.18
2652 3058 4.766404 ACCCAAGAACAAATCGATGAAC 57.234 40.909 0.00 0.00 0.00 3.18
2653 3059 5.048782 CAGAACCCAAGAACAAATCGATGAA 60.049 40.000 0.00 0.00 0.00 2.57
2654 3060 4.455533 CAGAACCCAAGAACAAATCGATGA 59.544 41.667 0.00 0.00 0.00 2.92
2655 3061 4.216257 ACAGAACCCAAGAACAAATCGATG 59.784 41.667 0.00 0.00 0.00 3.84
2656 3062 4.398319 ACAGAACCCAAGAACAAATCGAT 58.602 39.130 0.00 0.00 0.00 3.59
2657 3063 3.813166 GACAGAACCCAAGAACAAATCGA 59.187 43.478 0.00 0.00 0.00 3.59
2658 3064 3.563808 TGACAGAACCCAAGAACAAATCG 59.436 43.478 0.00 0.00 0.00 3.34
2659 3065 4.580580 AGTGACAGAACCCAAGAACAAATC 59.419 41.667 0.00 0.00 0.00 2.17
2660 3066 4.339247 CAGTGACAGAACCCAAGAACAAAT 59.661 41.667 0.00 0.00 0.00 2.32
2661 3067 3.694072 CAGTGACAGAACCCAAGAACAAA 59.306 43.478 0.00 0.00 0.00 2.83
2662 3068 3.278574 CAGTGACAGAACCCAAGAACAA 58.721 45.455 0.00 0.00 0.00 2.83
2663 3069 2.917933 CAGTGACAGAACCCAAGAACA 58.082 47.619 0.00 0.00 0.00 3.18
2664 3070 1.604278 GCAGTGACAGAACCCAAGAAC 59.396 52.381 0.00 0.00 0.00 3.01
2665 3071 1.490490 AGCAGTGACAGAACCCAAGAA 59.510 47.619 0.00 0.00 0.00 2.52
2666 3072 1.070758 GAGCAGTGACAGAACCCAAGA 59.929 52.381 0.00 0.00 0.00 3.02
2667 3073 1.517242 GAGCAGTGACAGAACCCAAG 58.483 55.000 0.00 0.00 0.00 3.61
2668 3074 0.108585 GGAGCAGTGACAGAACCCAA 59.891 55.000 0.00 0.00 0.00 4.12
2669 3075 1.754745 GGAGCAGTGACAGAACCCA 59.245 57.895 0.00 0.00 0.00 4.51
2670 3076 1.003233 GGGAGCAGTGACAGAACCC 60.003 63.158 0.00 0.00 0.00 4.11
2671 3077 0.321122 CAGGGAGCAGTGACAGAACC 60.321 60.000 0.00 0.00 0.00 3.62
2672 3078 0.952984 GCAGGGAGCAGTGACAGAAC 60.953 60.000 0.00 0.00 44.79 3.01
2673 3079 1.372683 GCAGGGAGCAGTGACAGAA 59.627 57.895 0.00 0.00 44.79 3.02
2674 3080 3.063526 GCAGGGAGCAGTGACAGA 58.936 61.111 0.00 0.00 44.79 3.41
2684 3090 4.864334 GGATGGCCGTGCAGGGAG 62.864 72.222 29.10 3.85 41.48 4.30
2694 3100 1.153249 TGAACGGATTCGGATGGCC 60.153 57.895 0.00 0.00 41.39 5.36
2695 3101 1.436983 GGTGAACGGATTCGGATGGC 61.437 60.000 0.00 0.00 41.39 4.40
2696 3102 1.151777 CGGTGAACGGATTCGGATGG 61.152 60.000 0.00 0.00 41.39 3.51
2697 3103 1.762222 GCGGTGAACGGATTCGGATG 61.762 60.000 0.00 0.00 44.51 3.51
2698 3104 1.520787 GCGGTGAACGGATTCGGAT 60.521 57.895 0.00 0.00 44.51 4.18
2699 3105 2.125832 GCGGTGAACGGATTCGGA 60.126 61.111 0.00 0.00 44.51 4.55
2700 3106 3.192922 GGCGGTGAACGGATTCGG 61.193 66.667 0.00 0.00 44.51 4.30
2701 3107 2.125673 AGGCGGTGAACGGATTCG 60.126 61.111 0.00 0.00 44.51 3.34
2702 3108 1.084370 CAGAGGCGGTGAACGGATTC 61.084 60.000 0.00 0.00 44.51 2.52
2703 3109 1.079127 CAGAGGCGGTGAACGGATT 60.079 57.895 0.00 0.00 44.51 3.01
2704 3110 2.227089 GACAGAGGCGGTGAACGGAT 62.227 60.000 0.00 0.00 44.51 4.18
2705 3111 2.915659 ACAGAGGCGGTGAACGGA 60.916 61.111 0.00 0.00 44.51 4.69
2706 3112 2.432628 GACAGAGGCGGTGAACGG 60.433 66.667 0.00 0.00 44.51 4.44
2708 3114 0.946221 CAGTGACAGAGGCGGTGAAC 60.946 60.000 0.00 0.00 0.00 3.18
2709 3115 1.367471 CAGTGACAGAGGCGGTGAA 59.633 57.895 0.00 0.00 0.00 3.18
2710 3116 3.051210 CAGTGACAGAGGCGGTGA 58.949 61.111 0.00 0.00 0.00 4.02
2711 3117 2.740055 GCAGTGACAGAGGCGGTG 60.740 66.667 0.00 0.00 0.00 4.94
2712 3118 2.919856 AGCAGTGACAGAGGCGGT 60.920 61.111 0.00 0.00 0.00 5.68
2713 3119 2.125753 GAGCAGTGACAGAGGCGG 60.126 66.667 0.00 0.00 0.00 6.13
2714 3120 2.125753 GGAGCAGTGACAGAGGCG 60.126 66.667 0.00 0.00 0.00 5.52
2715 3121 2.267324 GGGAGCAGTGACAGAGGC 59.733 66.667 0.00 0.00 0.00 4.70
2716 3122 1.595882 CAGGGAGCAGTGACAGAGG 59.404 63.158 0.00 0.00 0.00 3.69
2717 3123 1.079266 GCAGGGAGCAGTGACAGAG 60.079 63.158 0.00 0.00 44.79 3.35
2718 3124 3.063526 GCAGGGAGCAGTGACAGA 58.936 61.111 0.00 0.00 44.79 3.41
2727 3133 3.132801 GCAGCAGAAGCAGGGAGC 61.133 66.667 0.00 0.00 45.49 4.70
2728 3134 1.077644 ATGCAGCAGAAGCAGGGAG 60.078 57.895 0.00 0.00 46.36 4.30
2729 3135 1.077930 GATGCAGCAGAAGCAGGGA 60.078 57.895 0.00 0.00 46.36 4.20
2730 3136 1.377366 CTGATGCAGCAGAAGCAGGG 61.377 60.000 27.60 0.00 46.36 4.45
2731 3137 1.377366 CCTGATGCAGCAGAAGCAGG 61.377 60.000 32.59 12.50 46.36 4.85
2732 3138 0.392595 TCCTGATGCAGCAGAAGCAG 60.393 55.000 32.59 15.64 46.36 4.24
2734 3140 0.450983 GTTCCTGATGCAGCAGAAGC 59.549 55.000 32.59 12.10 38.14 3.86
2735 3141 0.725686 CGTTCCTGATGCAGCAGAAG 59.274 55.000 32.59 17.13 38.14 2.85
2736 3142 1.300971 GCGTTCCTGATGCAGCAGAA 61.301 55.000 32.59 20.55 40.14 3.02
2737 3143 1.742880 GCGTTCCTGATGCAGCAGA 60.743 57.895 32.59 15.95 40.14 4.26
2738 3144 2.036571 TGCGTTCCTGATGCAGCAG 61.037 57.895 24.93 24.93 45.11 4.24
2739 3145 2.032376 TGCGTTCCTGATGCAGCA 59.968 55.556 3.82 3.82 45.11 4.41
2743 3149 2.202349 GCGTTGCGTTCCTGATGC 60.202 61.111 0.00 0.00 40.83 3.91
2744 3150 0.168788 ATTGCGTTGCGTTCCTGATG 59.831 50.000 0.00 0.00 0.00 3.07
2745 3151 1.396996 GTATTGCGTTGCGTTCCTGAT 59.603 47.619 0.00 0.00 0.00 2.90
2746 3152 0.793861 GTATTGCGTTGCGTTCCTGA 59.206 50.000 0.00 0.00 0.00 3.86
2747 3153 0.515127 TGTATTGCGTTGCGTTCCTG 59.485 50.000 0.00 0.00 0.00 3.86
2748 3154 1.231221 TTGTATTGCGTTGCGTTCCT 58.769 45.000 0.00 0.00 0.00 3.36
2749 3155 1.910819 CATTGTATTGCGTTGCGTTCC 59.089 47.619 0.00 0.00 0.00 3.62
2750 3156 1.910819 CCATTGTATTGCGTTGCGTTC 59.089 47.619 0.00 0.00 0.00 3.95
2751 3157 1.975837 CCATTGTATTGCGTTGCGTT 58.024 45.000 0.00 0.00 0.00 4.84
2752 3158 0.455972 GCCATTGTATTGCGTTGCGT 60.456 50.000 0.00 0.00 0.00 5.24
2753 3159 1.139226 GGCCATTGTATTGCGTTGCG 61.139 55.000 0.00 0.00 0.00 4.85
2754 3160 1.139226 CGGCCATTGTATTGCGTTGC 61.139 55.000 2.24 0.00 0.00 4.17
2755 3161 0.449786 TCGGCCATTGTATTGCGTTG 59.550 50.000 2.24 0.00 0.00 4.10
2756 3162 0.450184 GTCGGCCATTGTATTGCGTT 59.550 50.000 2.24 0.00 0.00 4.84
2757 3163 1.701545 CGTCGGCCATTGTATTGCGT 61.702 55.000 2.24 0.00 0.00 5.24
2758 3164 1.011242 CGTCGGCCATTGTATTGCG 60.011 57.895 2.24 0.00 0.00 4.85
2759 3165 0.027586 GTCGTCGGCCATTGTATTGC 59.972 55.000 2.24 0.00 0.00 3.56
2760 3166 0.655733 GGTCGTCGGCCATTGTATTG 59.344 55.000 11.94 0.00 0.00 1.90
2761 3167 0.250793 TGGTCGTCGGCCATTGTATT 59.749 50.000 16.16 0.00 0.00 1.89
2762 3168 0.461339 GTGGTCGTCGGCCATTGTAT 60.461 55.000 23.49 0.00 38.40 2.29
2763 3169 1.079681 GTGGTCGTCGGCCATTGTA 60.080 57.895 23.49 0.00 38.40 2.41
2764 3170 2.358247 GTGGTCGTCGGCCATTGT 60.358 61.111 23.49 0.00 38.40 2.71
2765 3171 1.705337 GATGTGGTCGTCGGCCATTG 61.705 60.000 23.49 0.00 38.40 2.82
2766 3172 1.449601 GATGTGGTCGTCGGCCATT 60.450 57.895 23.49 13.00 38.40 3.16
2767 3173 2.186903 GATGTGGTCGTCGGCCAT 59.813 61.111 23.49 6.79 38.40 4.40
2768 3174 3.295304 CTGATGTGGTCGTCGGCCA 62.295 63.158 16.16 16.16 32.69 5.36
2769 3175 2.298158 ATCTGATGTGGTCGTCGGCC 62.298 60.000 9.51 9.51 36.29 6.13
2770 3176 0.872021 GATCTGATGTGGTCGTCGGC 60.872 60.000 0.00 0.00 36.29 5.54
2771 3177 0.455815 TGATCTGATGTGGTCGTCGG 59.544 55.000 0.00 0.00 37.32 4.79
2772 3178 1.135402 TGTGATCTGATGTGGTCGTCG 60.135 52.381 0.00 0.00 32.69 5.12
2773 3179 2.534298 CTGTGATCTGATGTGGTCGTC 58.466 52.381 0.00 0.00 0.00 4.20
2774 3180 1.205655 CCTGTGATCTGATGTGGTCGT 59.794 52.381 0.00 0.00 0.00 4.34
2775 3181 1.205655 ACCTGTGATCTGATGTGGTCG 59.794 52.381 0.00 0.00 0.00 4.79
2776 3182 2.234661 TGACCTGTGATCTGATGTGGTC 59.765 50.000 15.21 15.21 41.81 4.02
2777 3183 2.259917 TGACCTGTGATCTGATGTGGT 58.740 47.619 0.00 0.00 0.00 4.16
2778 3184 3.555527 ATGACCTGTGATCTGATGTGG 57.444 47.619 0.00 0.00 0.00 4.17
2779 3185 5.236282 GGATATGACCTGTGATCTGATGTG 58.764 45.833 0.00 0.00 0.00 3.21
2780 3186 4.285517 GGGATATGACCTGTGATCTGATGT 59.714 45.833 0.00 0.00 0.00 3.06
2781 3187 4.323333 GGGGATATGACCTGTGATCTGATG 60.323 50.000 0.00 0.00 0.00 3.07
2782 3188 3.843027 GGGGATATGACCTGTGATCTGAT 59.157 47.826 0.00 0.00 0.00 2.90
2783 3189 3.242867 GGGGATATGACCTGTGATCTGA 58.757 50.000 0.00 0.00 0.00 3.27
2784 3190 2.028658 CGGGGATATGACCTGTGATCTG 60.029 54.545 0.00 0.00 0.00 2.90
2785 3191 2.251818 CGGGGATATGACCTGTGATCT 58.748 52.381 0.00 0.00 0.00 2.75
2786 3192 1.971357 ACGGGGATATGACCTGTGATC 59.029 52.381 6.70 0.00 45.64 2.92
2787 3193 2.103153 ACGGGGATATGACCTGTGAT 57.897 50.000 6.70 0.00 45.64 3.06
2788 3194 2.759839 TACGGGGATATGACCTGTGA 57.240 50.000 14.85 1.12 46.72 3.58
2789 3195 6.406624 GGTTATATACGGGGATATGACCTGTG 60.407 46.154 14.53 0.48 46.72 3.66
2791 3197 5.070047 GGGTTATATACGGGGATATGACCTG 59.930 48.000 18.91 1.19 43.30 4.00
2792 3198 5.214293 GGGTTATATACGGGGATATGACCT 58.786 45.833 18.91 0.00 43.30 3.85
2793 3199 4.346127 GGGGTTATATACGGGGATATGACC 59.654 50.000 13.78 13.78 43.15 4.02
2794 3200 4.964262 TGGGGTTATATACGGGGATATGAC 59.036 45.833 0.00 0.00 30.96 3.06
2795 3201 5.213519 CTGGGGTTATATACGGGGATATGA 58.786 45.833 0.00 0.00 0.00 2.15
2796 3202 4.202326 GCTGGGGTTATATACGGGGATATG 60.202 50.000 0.00 0.00 0.00 1.78
2797 3203 3.971971 GCTGGGGTTATATACGGGGATAT 59.028 47.826 0.00 0.00 0.00 1.63
2798 3204 3.377573 GCTGGGGTTATATACGGGGATA 58.622 50.000 0.00 0.00 0.00 2.59
2799 3205 2.193993 GCTGGGGTTATATACGGGGAT 58.806 52.381 0.00 0.00 0.00 3.85
2800 3206 1.648116 GCTGGGGTTATATACGGGGA 58.352 55.000 0.00 0.00 0.00 4.81
2801 3207 0.616891 GGCTGGGGTTATATACGGGG 59.383 60.000 0.00 0.00 0.00 5.73
2802 3208 1.278127 CTGGCTGGGGTTATATACGGG 59.722 57.143 0.00 0.00 0.00 5.28
2803 3209 1.338769 GCTGGCTGGGGTTATATACGG 60.339 57.143 0.00 0.00 0.00 4.02
2804 3210 1.671850 CGCTGGCTGGGGTTATATACG 60.672 57.143 0.24 0.00 0.00 3.06
2805 3211 1.944430 GCGCTGGCTGGGGTTATATAC 60.944 57.143 0.00 0.00 35.83 1.47
2806 3212 0.323629 GCGCTGGCTGGGGTTATATA 59.676 55.000 0.00 0.00 35.83 0.86
2807 3213 1.073199 GCGCTGGCTGGGGTTATAT 59.927 57.895 0.00 0.00 35.83 0.86
2808 3214 1.916206 TTGCGCTGGCTGGGGTTATA 61.916 55.000 9.73 0.00 40.82 0.98
2809 3215 3.280938 TTGCGCTGGCTGGGGTTAT 62.281 57.895 9.73 0.00 40.82 1.89
2810 3216 3.918253 CTTGCGCTGGCTGGGGTTA 62.918 63.158 9.73 0.00 40.82 2.85
2813 3219 3.918253 TTACTTGCGCTGGCTGGGG 62.918 63.158 9.73 1.13 40.82 4.96
2814 3220 1.971167 TTTACTTGCGCTGGCTGGG 60.971 57.895 9.73 4.01 40.82 4.45
2815 3221 1.210155 GTTTACTTGCGCTGGCTGG 59.790 57.895 9.73 0.00 40.82 4.85
2816 3222 0.385974 GTGTTTACTTGCGCTGGCTG 60.386 55.000 9.73 0.00 40.82 4.85
2817 3223 0.817634 TGTGTTTACTTGCGCTGGCT 60.818 50.000 9.73 0.00 40.82 4.75
2818 3224 0.030101 TTGTGTTTACTTGCGCTGGC 59.970 50.000 9.73 0.00 40.52 4.85
2819 3225 1.334960 CCTTGTGTTTACTTGCGCTGG 60.335 52.381 9.73 3.50 0.00 4.85
2820 3226 1.601903 TCCTTGTGTTTACTTGCGCTG 59.398 47.619 9.73 3.92 0.00 5.18
2821 3227 1.873591 CTCCTTGTGTTTACTTGCGCT 59.126 47.619 9.73 0.00 0.00 5.92
2822 3228 1.069227 CCTCCTTGTGTTTACTTGCGC 60.069 52.381 0.00 0.00 0.00 6.09
2823 3229 1.069227 GCCTCCTTGTGTTTACTTGCG 60.069 52.381 0.00 0.00 0.00 4.85
2824 3230 1.953686 TGCCTCCTTGTGTTTACTTGC 59.046 47.619 0.00 0.00 0.00 4.01
2825 3231 2.030805 GCTGCCTCCTTGTGTTTACTTG 60.031 50.000 0.00 0.00 0.00 3.16
2826 3232 2.230660 GCTGCCTCCTTGTGTTTACTT 58.769 47.619 0.00 0.00 0.00 2.24
2827 3233 1.545651 GGCTGCCTCCTTGTGTTTACT 60.546 52.381 12.43 0.00 0.00 2.24
2828 3234 0.881796 GGCTGCCTCCTTGTGTTTAC 59.118 55.000 12.43 0.00 0.00 2.01
2829 3235 0.476338 TGGCTGCCTCCTTGTGTTTA 59.524 50.000 21.03 0.00 0.00 2.01
2830 3236 1.109323 GTGGCTGCCTCCTTGTGTTT 61.109 55.000 21.03 0.00 0.00 2.83
2831 3237 1.529244 GTGGCTGCCTCCTTGTGTT 60.529 57.895 21.03 0.00 0.00 3.32
2832 3238 2.113986 GTGGCTGCCTCCTTGTGT 59.886 61.111 21.03 0.00 0.00 3.72
2833 3239 3.052082 CGTGGCTGCCTCCTTGTG 61.052 66.667 21.03 0.00 0.00 3.33
2834 3240 4.335647 CCGTGGCTGCCTCCTTGT 62.336 66.667 21.03 0.00 0.00 3.16
2835 3241 3.965539 CTCCGTGGCTGCCTCCTTG 62.966 68.421 21.03 6.73 0.00 3.61
2836 3242 3.710722 CTCCGTGGCTGCCTCCTT 61.711 66.667 21.03 0.00 0.00 3.36
2837 3243 4.704103 TCTCCGTGGCTGCCTCCT 62.704 66.667 21.03 0.00 0.00 3.69
2838 3244 2.543067 AATTCTCCGTGGCTGCCTCC 62.543 60.000 21.03 9.46 0.00 4.30
2839 3245 0.178068 TAATTCTCCGTGGCTGCCTC 59.822 55.000 21.03 15.65 0.00 4.70
2840 3246 0.839946 ATAATTCTCCGTGGCTGCCT 59.160 50.000 21.03 0.00 0.00 4.75
2841 3247 1.334869 CAATAATTCTCCGTGGCTGCC 59.665 52.381 12.87 12.87 0.00 4.85
2842 3248 2.017049 ACAATAATTCTCCGTGGCTGC 58.983 47.619 0.00 0.00 0.00 5.25
2843 3249 4.634004 TGTAACAATAATTCTCCGTGGCTG 59.366 41.667 0.00 0.00 0.00 4.85
2844 3250 4.839121 TGTAACAATAATTCTCCGTGGCT 58.161 39.130 0.00 0.00 0.00 4.75
2845 3251 4.634443 ACTGTAACAATAATTCTCCGTGGC 59.366 41.667 0.00 0.00 0.00 5.01
2846 3252 7.837202 TTACTGTAACAATAATTCTCCGTGG 57.163 36.000 0.00 0.00 0.00 4.94
2847 3253 9.916397 GAATTACTGTAACAATAATTCTCCGTG 57.084 33.333 14.63 0.00 40.11 4.94
2848 3254 9.886132 AGAATTACTGTAACAATAATTCTCCGT 57.114 29.630 17.31 2.56 45.82 4.69
2864 3270 8.504005 CCTGAAACGAAACAATAGAATTACTGT 58.496 33.333 0.00 0.00 0.00 3.55
2865 3271 7.481798 GCCTGAAACGAAACAATAGAATTACTG 59.518 37.037 0.00 0.00 0.00 2.74
2866 3272 7.174253 TGCCTGAAACGAAACAATAGAATTACT 59.826 33.333 0.00 0.00 0.00 2.24
2867 3273 7.302524 TGCCTGAAACGAAACAATAGAATTAC 58.697 34.615 0.00 0.00 0.00 1.89
2868 3274 7.389330 TCTGCCTGAAACGAAACAATAGAATTA 59.611 33.333 0.00 0.00 0.00 1.40
2869 3275 6.206634 TCTGCCTGAAACGAAACAATAGAATT 59.793 34.615 0.00 0.00 0.00 2.17
2870 3276 5.705441 TCTGCCTGAAACGAAACAATAGAAT 59.295 36.000 0.00 0.00 0.00 2.40
2871 3277 5.060506 TCTGCCTGAAACGAAACAATAGAA 58.939 37.500 0.00 0.00 0.00 2.10
2872 3278 4.637276 TCTGCCTGAAACGAAACAATAGA 58.363 39.130 0.00 0.00 0.00 1.98
2873 3279 4.142816 CCTCTGCCTGAAACGAAACAATAG 60.143 45.833 0.00 0.00 0.00 1.73
2874 3280 3.751175 CCTCTGCCTGAAACGAAACAATA 59.249 43.478 0.00 0.00 0.00 1.90
2875 3281 2.554032 CCTCTGCCTGAAACGAAACAAT 59.446 45.455 0.00 0.00 0.00 2.71
2876 3282 1.946768 CCTCTGCCTGAAACGAAACAA 59.053 47.619 0.00 0.00 0.00 2.83
2877 3283 1.134220 ACCTCTGCCTGAAACGAAACA 60.134 47.619 0.00 0.00 0.00 2.83
2878 3284 1.594331 ACCTCTGCCTGAAACGAAAC 58.406 50.000 0.00 0.00 0.00 2.78
2879 3285 2.367567 AGTACCTCTGCCTGAAACGAAA 59.632 45.455 0.00 0.00 0.00 3.46
2880 3286 1.968493 AGTACCTCTGCCTGAAACGAA 59.032 47.619 0.00 0.00 0.00 3.85
2881 3287 1.629043 AGTACCTCTGCCTGAAACGA 58.371 50.000 0.00 0.00 0.00 3.85
2882 3288 2.069273 CAAGTACCTCTGCCTGAAACG 58.931 52.381 0.00 0.00 0.00 3.60
2883 3289 2.038557 TCCAAGTACCTCTGCCTGAAAC 59.961 50.000 0.00 0.00 0.00 2.78
2884 3290 2.334977 TCCAAGTACCTCTGCCTGAAA 58.665 47.619 0.00 0.00 0.00 2.69
2885 3291 2.024176 TCCAAGTACCTCTGCCTGAA 57.976 50.000 0.00 0.00 0.00 3.02
2886 3292 2.024176 TTCCAAGTACCTCTGCCTGA 57.976 50.000 0.00 0.00 0.00 3.86
2887 3293 2.859165 TTTCCAAGTACCTCTGCCTG 57.141 50.000 0.00 0.00 0.00 4.85
2888 3294 3.308473 GGATTTTCCAAGTACCTCTGCCT 60.308 47.826 0.00 0.00 36.28 4.75
2889 3295 3.017442 GGATTTTCCAAGTACCTCTGCC 58.983 50.000 0.00 0.00 36.28 4.85
2890 3296 3.686016 TGGATTTTCCAAGTACCTCTGC 58.314 45.455 0.00 0.00 45.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.