Multiple sequence alignment - TraesCS7A01G132600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G132600 chr7A 100.000 8339 0 0 1445 9783 85223013 85214675 0.000000e+00 15400.0
1 TraesCS7A01G132600 chr7A 100.000 1058 0 0 1 1058 85224457 85223400 0.000000e+00 1954.0
2 TraesCS7A01G132600 chr7A 94.595 37 2 0 736 772 611896375 611896411 3.820000e-04 58.4
3 TraesCS7A01G132600 chr7D 95.231 4215 150 14 4065 8244 83637004 83632806 0.000000e+00 6623.0
4 TraesCS7A01G132600 chr7D 92.333 900 60 5 1992 2886 83638977 83638082 0.000000e+00 1271.0
5 TraesCS7A01G132600 chr7D 91.794 719 37 9 8308 9005 83632786 83632069 0.000000e+00 981.0
6 TraesCS7A01G132600 chr7D 93.893 524 28 4 2975 3496 83638094 83637573 0.000000e+00 787.0
7 TraesCS7A01G132600 chr7D 94.908 491 16 5 9295 9783 83631781 83631298 0.000000e+00 760.0
8 TraesCS7A01G132600 chr7D 84.983 586 32 20 1445 1983 83639620 83639044 2.400000e-150 544.0
9 TraesCS7A01G132600 chr7D 96.711 304 9 1 3671 3973 83637298 83636995 1.130000e-138 505.0
10 TraesCS7A01G132600 chr7D 97.744 133 2 1 3527 3659 83637573 83637442 2.750000e-55 228.0
11 TraesCS7A01G132600 chr7D 79.624 319 15 24 770 1058 83640054 83639756 6.030000e-42 183.0
12 TraesCS7A01G132600 chr7D 92.045 88 6 1 2885 2972 299159033 299159119 1.330000e-23 122.0
13 TraesCS7A01G132600 chr7D 94.828 58 3 0 9007 9064 83631904 83631847 3.760000e-14 91.6
14 TraesCS7A01G132600 chr7B 94.886 3637 140 18 5285 8895 33085879 33082263 0.000000e+00 5644.0
15 TraesCS7A01G132600 chr7B 95.848 2312 79 8 2975 5271 33088373 33086064 0.000000e+00 3722.0
16 TraesCS7A01G132600 chr7B 90.089 898 79 6 1995 2886 33089254 33088361 0.000000e+00 1157.0
17 TraesCS7A01G132600 chr7B 93.950 595 27 6 9192 9782 33081994 33081405 0.000000e+00 891.0
18 TraesCS7A01G132600 chr7B 94.872 156 8 0 8899 9054 33082219 33082064 2.730000e-60 244.0
19 TraesCS7A01G132600 chr7B 92.593 162 8 4 1502 1661 33089633 33089474 7.640000e-56 230.0
20 TraesCS7A01G132600 chr7B 80.769 260 38 11 5309 5562 562095194 562095447 1.000000e-44 193.0
21 TraesCS7A01G132600 chr7B 77.410 332 17 30 780 1058 33090165 33089839 2.850000e-30 145.0
22 TraesCS7A01G132600 chr7B 100.000 44 0 0 693 736 374982573 374982616 2.260000e-11 82.4
23 TraesCS7A01G132600 chr7B 97.059 34 1 0 736 769 73671323 73671356 3.820000e-04 58.4
24 TraesCS7A01G132600 chr6A 99.140 698 6 0 2 699 116803692 116802995 0.000000e+00 1256.0
25 TraesCS7A01G132600 chr5A 99.278 693 5 0 2 694 319456852 319457544 0.000000e+00 1253.0
26 TraesCS7A01G132600 chr5A 79.231 260 50 4 5306 5563 397510394 397510137 2.810000e-40 178.0
27 TraesCS7A01G132600 chr1A 99.278 693 5 0 2 694 554926149 554926841 0.000000e+00 1253.0
28 TraesCS7A01G132600 chr1A 91.971 137 11 0 9060 9196 49298216 49298352 1.000000e-44 193.0
29 TraesCS7A01G132600 chr1A 96.552 87 2 1 2886 2971 299653813 299653899 1.020000e-29 143.0
30 TraesCS7A01G132600 chr1A 88.506 87 10 0 2885 2971 95858281 95858367 1.340000e-18 106.0
31 TraesCS7A01G132600 chr1B 98.847 694 7 1 2 694 602166315 602167008 0.000000e+00 1236.0
32 TraesCS7A01G132600 chr1B 91.404 698 55 5 2 696 63186509 63187204 0.000000e+00 952.0
33 TraesCS7A01G132600 chr1B 93.382 136 9 0 9061 9196 587986864 587986729 1.670000e-47 202.0
34 TraesCS7A01G132600 chr1B 97.059 34 1 0 736 769 383901285 383901318 3.820000e-04 58.4
35 TraesCS7A01G132600 chr3B 87.554 699 78 8 2 694 726613954 726614649 0.000000e+00 800.0
36 TraesCS7A01G132600 chr3B 89.697 165 12 2 3272 3436 42630976 42630817 1.290000e-48 206.0
37 TraesCS7A01G132600 chr3B 92.135 89 6 1 2884 2972 181310752 181310839 3.710000e-24 124.0
38 TraesCS7A01G132600 chrUn 86.305 701 88 7 2 696 286753706 286754404 0.000000e+00 756.0
39 TraesCS7A01G132600 chrUn 86.305 701 88 7 2 696 296180010 296180708 0.000000e+00 756.0
40 TraesCS7A01G132600 chr4A 86.305 701 88 7 2 696 662322151 662322849 0.000000e+00 756.0
41 TraesCS7A01G132600 chr4A 94.565 92 4 1 2885 2975 174989557 174989466 3.680000e-29 141.0
42 TraesCS7A01G132600 chr6D 90.303 165 11 3 3272 3436 304099294 304099453 2.770000e-50 211.0
43 TraesCS7A01G132600 chr6D 91.096 146 11 2 9050 9195 63127116 63126973 7.750000e-46 196.0
44 TraesCS7A01G132600 chr6D 79.926 269 48 5 5309 5574 460588009 460588274 1.000000e-44 193.0
45 TraesCS7A01G132600 chr6D 100.000 35 0 0 5237 5271 18022201 18022235 2.280000e-06 65.8
46 TraesCS7A01G132600 chr3A 90.303 165 11 2 3272 3436 34532607 34532448 2.770000e-50 211.0
47 TraesCS7A01G132600 chr3A 90.184 163 11 2 3272 3434 83748179 83748022 3.580000e-49 207.0
48 TraesCS7A01G132600 chr3A 93.846 130 8 0 9063 9192 593991158 593991287 7.750000e-46 196.0
49 TraesCS7A01G132600 chr3D 93.571 140 8 1 9061 9200 349973487 349973625 3.580000e-49 207.0
50 TraesCS7A01G132600 chr3D 89.634 164 12 2 3273 3436 25133092 25132934 4.630000e-48 204.0
51 TraesCS7A01G132600 chr3D 79.693 261 39 11 5309 5562 335673095 335673348 1.010000e-39 176.0
52 TraesCS7A01G132600 chr3D 88.889 99 9 2 2882 2980 199225805 199225901 4.800000e-23 121.0
53 TraesCS7A01G132600 chr3D 90.476 84 8 0 2886 2969 372618798 372618715 2.890000e-20 111.0
54 TraesCS7A01G132600 chr6B 89.091 165 13 3 3272 3436 469774179 469774338 5.990000e-47 200.0
55 TraesCS7A01G132600 chr6B 89.189 148 13 3 9061 9207 82332881 82333026 2.170000e-41 182.0
56 TraesCS7A01G132600 chr6B 89.189 148 13 3 9061 9207 82424265 82424410 2.170000e-41 182.0
57 TraesCS7A01G132600 chr6B 88.514 148 14 3 9061 9207 82421941 82422086 1.010000e-39 176.0
58 TraesCS7A01G132600 chr6B 100.000 33 0 0 736 768 86943732 86943700 2.950000e-05 62.1
59 TraesCS7A01G132600 chr6B 100.000 32 0 0 736 767 124634305 124634336 1.060000e-04 60.2
60 TraesCS7A01G132600 chr6B 94.595 37 0 2 736 771 127756533 127756498 1.000000e-03 56.5
61 TraesCS7A01G132600 chr6B 100.000 30 0 0 736 765 561264210 561264239 1.000000e-03 56.5
62 TraesCS7A01G132600 chr1D 89.091 165 13 2 3272 3436 175819994 175819835 5.990000e-47 200.0
63 TraesCS7A01G132600 chr1D 93.077 130 9 0 9063 9192 204390317 204390188 3.610000e-44 191.0
64 TraesCS7A01G132600 chr2B 80.233 258 45 5 5309 5563 423002485 423002231 1.300000e-43 189.0
65 TraesCS7A01G132600 chr2B 94.872 39 1 1 736 774 726761603 726761566 1.060000e-04 60.2
66 TraesCS7A01G132600 chr2A 79.231 260 46 7 5306 5561 636904432 636904687 3.630000e-39 174.0
67 TraesCS7A01G132600 chr2A 94.382 89 4 1 2887 2975 144847484 144847397 1.710000e-27 135.0
68 TraesCS7A01G132600 chr2D 78.846 260 47 7 5306 5561 491802614 491802869 1.690000e-37 169.0
69 TraesCS7A01G132600 chr5B 93.103 87 5 1 2889 2975 92666417 92666332 1.030000e-24 126.0
70 TraesCS7A01G132600 chr4D 89.062 64 1 1 9301 9364 186062270 186062213 3.790000e-09 75.0
71 TraesCS7A01G132600 chr4B 100.000 32 0 0 736 767 570842946 570842977 1.060000e-04 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G132600 chr7A 85214675 85224457 9782 True 8677.00 15400 100.000000 1 9783 2 chr7A.!!$R1 9782
1 TraesCS7A01G132600 chr7D 83631298 83640054 8756 True 1197.36 6623 92.204900 770 9783 10 chr7D.!!$R1 9013
2 TraesCS7A01G132600 chr7B 33081405 33090165 8760 True 1719.00 5644 91.378286 780 9782 7 chr7B.!!$R1 9002
3 TraesCS7A01G132600 chr6A 116802995 116803692 697 True 1256.00 1256 99.140000 2 699 1 chr6A.!!$R1 697
4 TraesCS7A01G132600 chr5A 319456852 319457544 692 False 1253.00 1253 99.278000 2 694 1 chr5A.!!$F1 692
5 TraesCS7A01G132600 chr1A 554926149 554926841 692 False 1253.00 1253 99.278000 2 694 1 chr1A.!!$F4 692
6 TraesCS7A01G132600 chr1B 602166315 602167008 693 False 1236.00 1236 98.847000 2 694 1 chr1B.!!$F3 692
7 TraesCS7A01G132600 chr1B 63186509 63187204 695 False 952.00 952 91.404000 2 696 1 chr1B.!!$F1 694
8 TraesCS7A01G132600 chr3B 726613954 726614649 695 False 800.00 800 87.554000 2 694 1 chr3B.!!$F2 692
9 TraesCS7A01G132600 chrUn 286753706 286754404 698 False 756.00 756 86.305000 2 696 1 chrUn.!!$F1 694
10 TraesCS7A01G132600 chrUn 296180010 296180708 698 False 756.00 756 86.305000 2 696 1 chrUn.!!$F2 694
11 TraesCS7A01G132600 chr4A 662322151 662322849 698 False 756.00 756 86.305000 2 696 1 chr4A.!!$F1 694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
764 773 0.111639 TCAAAAGTGCCCACCCCTAC 59.888 55.000 0.00 0.0 0.00 3.18 F
765 774 0.898326 CAAAAGTGCCCACCCCTACC 60.898 60.000 0.00 0.0 0.00 3.18 F
2290 2467 0.179045 GTCCCATGGATAGCGCAACT 60.179 55.000 15.22 0.0 32.73 3.16 F
2569 2746 0.106519 AGGGCATGGGCATTACTGTC 60.107 55.000 0.00 0.0 43.71 3.51 F
2570 2747 0.106519 GGGCATGGGCATTACTGTCT 60.107 55.000 0.00 0.0 43.71 3.41 F
2960 3141 0.169894 GGGAGTCGGTTACAGTCGTC 59.830 60.000 0.00 0.0 0.00 4.20 F
2961 3142 0.179205 GGAGTCGGTTACAGTCGTCG 60.179 60.000 0.00 0.0 0.00 5.12 F
3496 3679 0.446222 TCTGCGTTAATTTCAGCCGC 59.554 50.000 0.00 0.0 44.27 6.53 F
4255 4574 1.894466 CTTGACAATGTGCCCATCCAA 59.106 47.619 0.00 0.0 0.00 3.53 F
5639 6143 1.097232 ACATTGCATCCACACATCCG 58.903 50.000 0.00 0.0 0.00 4.18 F
6165 6681 2.159240 TGATCAACTACCAGCTACTGCG 60.159 50.000 0.00 0.0 45.42 5.18 F
6190 6706 3.728845 TGTTTTTCTCTCTGCGCTAACT 58.271 40.909 9.73 0.0 0.00 2.24 F
7673 8190 2.903855 CATGGATCCGTGCTGGGC 60.904 66.667 20.90 0.0 38.76 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1757 1848 0.031111 AGTGGGCAGGTAGCTGGATA 60.031 55.000 22.69 0.00 44.79 2.59 R
2551 2728 0.106519 AGACAGTAATGCCCATGCCC 60.107 55.000 0.00 0.00 36.33 5.36 R
3414 3596 0.977395 AAGGACAGACCCAGTGCTAC 59.023 55.000 0.00 0.00 36.61 3.58 R
3559 3742 2.074576 CGTTGAGACCGACTACTGAGA 58.925 52.381 0.00 0.00 0.00 3.27 R
3560 3743 2.074576 TCGTTGAGACCGACTACTGAG 58.925 52.381 0.00 0.00 0.00 3.35 R
4956 5284 3.249799 CGGTGCAAGAAAACATGTCTACA 59.750 43.478 0.00 0.00 0.00 2.74 R
4957 5285 3.496884 TCGGTGCAAGAAAACATGTCTAC 59.503 43.478 0.00 0.00 0.00 2.59 R
5283 5782 1.726853 CAGGAGTAAGGTTTGCCTCG 58.273 55.000 0.00 0.00 46.33 4.63 R
5775 6279 2.353889 CCCACATCATTTTCTCTGAGCG 59.646 50.000 0.00 0.00 0.00 5.03 R
7425 7941 1.063912 CTGCGTGAAAAGCACACTCAA 59.936 47.619 0.00 0.00 46.42 3.02 R
7673 8190 2.555325 TCTTCTGCAGTGCAATCTTTGG 59.445 45.455 20.22 5.57 38.41 3.28 R
8183 8703 2.096614 GCAACATGCTGACAAAATGCAC 60.097 45.455 0.00 0.00 40.96 4.57 R
8949 9517 0.035439 TCCAGGCATTTCTCGGTTCC 60.035 55.000 0.00 0.00 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
585 589 2.362503 ATCTCACCCGCACCTCGA 60.363 61.111 0.00 0.00 41.67 4.04
700 709 4.625607 CCTAGCGAGAGGGGAAATATTT 57.374 45.455 0.00 0.00 32.39 1.40
701 710 4.974399 CCTAGCGAGAGGGGAAATATTTT 58.026 43.478 1.43 0.00 32.39 1.82
702 711 5.377478 CCTAGCGAGAGGGGAAATATTTTT 58.623 41.667 1.43 0.00 32.39 1.94
727 736 3.987404 GCAAGAGCACCAACGGAT 58.013 55.556 0.00 0.00 41.58 4.18
728 737 2.257353 GCAAGAGCACCAACGGATT 58.743 52.632 0.00 0.00 41.58 3.01
729 738 0.598065 GCAAGAGCACCAACGGATTT 59.402 50.000 0.00 0.00 41.58 2.17
730 739 1.401539 GCAAGAGCACCAACGGATTTC 60.402 52.381 0.00 0.00 41.58 2.17
731 740 1.200020 CAAGAGCACCAACGGATTTCC 59.800 52.381 0.00 0.00 0.00 3.13
742 751 3.694889 GGATTTCCGCTGGTTTTCG 57.305 52.632 0.00 0.00 0.00 3.46
743 752 0.170339 GGATTTCCGCTGGTTTTCGG 59.830 55.000 0.00 0.00 46.52 4.30
744 753 0.879090 GATTTCCGCTGGTTTTCGGT 59.121 50.000 0.47 0.00 45.44 4.69
745 754 1.268625 GATTTCCGCTGGTTTTCGGTT 59.731 47.619 0.47 0.00 45.44 4.44
746 755 0.664224 TTTCCGCTGGTTTTCGGTTC 59.336 50.000 0.47 0.00 45.44 3.62
747 756 0.464013 TTCCGCTGGTTTTCGGTTCA 60.464 50.000 0.47 0.00 45.44 3.18
748 757 0.464013 TCCGCTGGTTTTCGGTTCAA 60.464 50.000 0.47 0.00 45.44 2.69
749 758 0.382515 CCGCTGGTTTTCGGTTCAAA 59.617 50.000 0.00 0.00 40.72 2.69
750 759 1.202313 CCGCTGGTTTTCGGTTCAAAA 60.202 47.619 0.00 0.00 40.72 2.44
751 760 2.116366 CGCTGGTTTTCGGTTCAAAAG 58.884 47.619 0.00 0.00 0.00 2.27
752 761 2.478879 CGCTGGTTTTCGGTTCAAAAGT 60.479 45.455 0.00 0.00 0.00 2.66
753 762 2.857748 GCTGGTTTTCGGTTCAAAAGTG 59.142 45.455 0.00 0.00 0.00 3.16
754 763 2.857748 CTGGTTTTCGGTTCAAAAGTGC 59.142 45.455 0.00 0.00 0.00 4.40
755 764 2.198406 GGTTTTCGGTTCAAAAGTGCC 58.802 47.619 0.00 0.00 0.00 5.01
756 765 2.198406 GTTTTCGGTTCAAAAGTGCCC 58.802 47.619 0.00 0.00 0.00 5.36
757 766 1.475403 TTTCGGTTCAAAAGTGCCCA 58.525 45.000 0.00 0.00 0.00 5.36
758 767 0.741915 TTCGGTTCAAAAGTGCCCAC 59.258 50.000 0.00 0.00 0.00 4.61
759 768 1.104577 TCGGTTCAAAAGTGCCCACC 61.105 55.000 0.00 0.00 0.00 4.61
760 769 1.745890 GGTTCAAAAGTGCCCACCC 59.254 57.895 0.00 0.00 0.00 4.61
761 770 1.745890 GTTCAAAAGTGCCCACCCC 59.254 57.895 0.00 0.00 0.00 4.95
762 771 0.759060 GTTCAAAAGTGCCCACCCCT 60.759 55.000 0.00 0.00 0.00 4.79
763 772 0.854218 TTCAAAAGTGCCCACCCCTA 59.146 50.000 0.00 0.00 0.00 3.53
764 773 0.111639 TCAAAAGTGCCCACCCCTAC 59.888 55.000 0.00 0.00 0.00 3.18
765 774 0.898326 CAAAAGTGCCCACCCCTACC 60.898 60.000 0.00 0.00 0.00 3.18
766 775 1.071909 AAAAGTGCCCACCCCTACCT 61.072 55.000 0.00 0.00 0.00 3.08
767 776 1.789576 AAAGTGCCCACCCCTACCTG 61.790 60.000 0.00 0.00 0.00 4.00
768 777 4.426313 GTGCCCACCCCTACCTGC 62.426 72.222 0.00 0.00 0.00 4.85
833 842 3.914713 AGGCCCAACCCAACCCAG 61.915 66.667 0.00 0.00 40.58 4.45
837 846 4.232061 CCAACCCAACCCAGCCCA 62.232 66.667 0.00 0.00 0.00 5.36
839 848 2.123033 AACCCAACCCAGCCCAAC 60.123 61.111 0.00 0.00 0.00 3.77
840 849 3.767044 AACCCAACCCAGCCCAACC 62.767 63.158 0.00 0.00 0.00 3.77
841 850 4.232061 CCCAACCCAGCCCAACCA 62.232 66.667 0.00 0.00 0.00 3.67
941 969 4.785453 GGAAGCCCGCCACTGAGG 62.785 72.222 0.00 0.00 41.84 3.86
950 978 3.164269 CCACTGAGGCGCCCCTAT 61.164 66.667 26.15 3.43 43.12 2.57
951 979 2.746375 CCACTGAGGCGCCCCTATT 61.746 63.158 26.15 2.91 43.12 1.73
952 980 1.227674 CACTGAGGCGCCCCTATTC 60.228 63.158 26.15 14.83 43.12 1.75
969 1006 4.875713 CCCCATTCCTTCCCGCCG 62.876 72.222 0.00 0.00 0.00 6.46
991 1028 3.462678 GCTCCCGTCCTGTCCTCC 61.463 72.222 0.00 0.00 0.00 4.30
992 1029 2.037367 CTCCCGTCCTGTCCTCCA 59.963 66.667 0.00 0.00 0.00 3.86
993 1030 2.037367 TCCCGTCCTGTCCTCCAG 59.963 66.667 0.00 0.00 41.15 3.86
994 1031 3.775654 CCCGTCCTGTCCTCCAGC 61.776 72.222 0.00 0.00 40.06 4.85
1471 1530 3.551915 GTCCGCCGCTTAACGCTC 61.552 66.667 0.00 0.00 41.76 5.03
1474 1535 3.255379 CGCCGCTTAACGCTCCTC 61.255 66.667 0.00 0.00 41.76 3.71
1478 1539 1.439679 CCGCTTAACGCTCCTCTTTT 58.560 50.000 0.00 0.00 41.76 2.27
1667 1758 1.371183 CACTTCTCTGAACCCGCCA 59.629 57.895 0.00 0.00 0.00 5.69
1710 1801 1.740296 CTGGGCCGTGTTTAGTCCG 60.740 63.158 0.00 0.00 0.00 4.79
1741 1832 4.846779 TTGCTTTCCGCTTTGACTAAAT 57.153 36.364 0.00 0.00 40.11 1.40
1745 1836 4.382754 GCTTTCCGCTTTGACTAAATTGTG 59.617 41.667 0.00 0.00 35.14 3.33
1790 1902 0.529378 CCCACTTCCTGATTGCAAGC 59.471 55.000 7.99 7.99 0.00 4.01
1797 1909 2.362736 TCCTGATTGCAAGCTCATGTC 58.637 47.619 16.73 1.45 0.00 3.06
1849 1961 3.349006 CACCCTCACGTGCTGCAC 61.349 66.667 22.38 22.38 0.00 4.57
1877 1989 3.995526 CAGTCAGTCACTGGCTTGA 57.004 52.632 9.93 0.00 44.67 3.02
1885 1997 2.838736 GTCACTGGCTTGACTTGAAGA 58.161 47.619 0.00 0.00 42.36 2.87
1886 1998 2.545946 GTCACTGGCTTGACTTGAAGAC 59.454 50.000 0.00 0.00 42.36 3.01
1887 1999 2.170397 TCACTGGCTTGACTTGAAGACA 59.830 45.455 0.00 0.00 38.73 3.41
1890 2002 1.202806 TGGCTTGACTTGAAGACAGGG 60.203 52.381 8.57 3.06 35.97 4.45
1891 2003 1.528129 GCTTGACTTGAAGACAGGGG 58.472 55.000 8.57 0.98 0.00 4.79
1892 2004 1.884067 GCTTGACTTGAAGACAGGGGG 60.884 57.143 8.57 0.00 0.00 5.40
1896 2008 2.512056 TGACTTGAAGACAGGGGGAAAA 59.488 45.455 0.00 0.00 0.00 2.29
1901 2018 1.889170 GAAGACAGGGGGAAAAAGCTG 59.111 52.381 0.00 0.00 0.00 4.24
1910 2027 3.324846 GGGGGAAAAAGCTGTCAGAAATT 59.675 43.478 3.32 0.00 0.00 1.82
1912 2029 5.368145 GGGGAAAAAGCTGTCAGAAATTTT 58.632 37.500 3.32 7.14 0.00 1.82
1918 2035 7.761651 AAAAGCTGTCAGAAATTTTGACTTC 57.238 32.000 22.52 17.01 44.08 3.01
1943 2060 3.469008 TGTCTGTTGTCTCGGTTGATT 57.531 42.857 0.00 0.00 0.00 2.57
1952 2069 7.335627 TGTTGTCTCGGTTGATTTAGGATAAT 58.664 34.615 0.00 0.00 0.00 1.28
1953 2070 7.279981 TGTTGTCTCGGTTGATTTAGGATAATG 59.720 37.037 0.00 0.00 0.00 1.90
1955 2072 5.701290 GTCTCGGTTGATTTAGGATAATGGG 59.299 44.000 0.00 0.00 0.00 4.00
1956 2073 5.368523 TCTCGGTTGATTTAGGATAATGGGT 59.631 40.000 0.00 0.00 0.00 4.51
1957 2074 5.373222 TCGGTTGATTTAGGATAATGGGTG 58.627 41.667 0.00 0.00 0.00 4.61
1958 2075 5.131308 TCGGTTGATTTAGGATAATGGGTGA 59.869 40.000 0.00 0.00 0.00 4.02
1959 2076 5.238650 CGGTTGATTTAGGATAATGGGTGAC 59.761 44.000 0.00 0.00 0.00 3.67
1960 2077 6.365520 GGTTGATTTAGGATAATGGGTGACT 58.634 40.000 0.00 0.00 0.00 3.41
1961 2078 7.514721 GGTTGATTTAGGATAATGGGTGACTA 58.485 38.462 0.00 0.00 0.00 2.59
2025 2201 3.329520 ACCAAGCATGTCCTACTTACCAA 59.670 43.478 0.00 0.00 0.00 3.67
2104 2281 1.883732 CTCCAGAGGAGCGAAACGA 59.116 57.895 0.00 0.00 43.29 3.85
2167 2344 1.897560 AAACAACAGCTGAGCCTACC 58.102 50.000 23.35 0.00 0.00 3.18
2173 2350 1.382420 AGCTGAGCCTACCCCAGAG 60.382 63.158 0.00 0.00 0.00 3.35
2176 2353 1.337118 CTGAGCCTACCCCAGAGATC 58.663 60.000 0.00 0.00 0.00 2.75
2290 2467 0.179045 GTCCCATGGATAGCGCAACT 60.179 55.000 15.22 0.00 32.73 3.16
2303 2480 4.766404 AGCGCAACTGCTTTATTAACTT 57.234 36.364 11.47 0.00 44.46 2.66
2313 2490 3.608073 GCTTTATTAACTTGTTGCCTGCG 59.392 43.478 0.00 0.00 0.00 5.18
2352 2529 7.987268 TTTCTAAGACGCTCAATACATGTAG 57.013 36.000 11.91 0.03 0.00 2.74
2396 2573 6.972328 GCCAATTATGAAGAACGCTGAAAATA 59.028 34.615 0.00 0.00 0.00 1.40
2404 2581 3.684788 AGAACGCTGAAAATAACGATGCT 59.315 39.130 0.00 0.00 0.00 3.79
2429 2606 1.893919 GAAGGCCTCTTCCTGCTCGT 61.894 60.000 5.23 0.00 42.61 4.18
2458 2635 4.023707 GCAGCAACAACTTCTGTCAGTATT 60.024 41.667 0.00 0.00 37.23 1.89
2475 2652 2.408271 ATTGATGCATGTCCAGACGT 57.592 45.000 2.46 0.00 0.00 4.34
2551 2728 4.040376 GTGAAAGCTTTGAACTGCAAGAG 58.960 43.478 18.30 0.00 37.87 2.85
2569 2746 0.106519 AGGGCATGGGCATTACTGTC 60.107 55.000 0.00 0.00 43.71 3.51
2570 2747 0.106519 GGGCATGGGCATTACTGTCT 60.107 55.000 0.00 0.00 43.71 3.41
2664 2841 7.537596 TTTCTGTTTACATCCCATTCATGTT 57.462 32.000 0.00 0.00 35.95 2.71
2665 2842 7.537596 TTCTGTTTACATCCCATTCATGTTT 57.462 32.000 0.00 0.00 35.95 2.83
2666 2843 7.537596 TCTGTTTACATCCCATTCATGTTTT 57.462 32.000 0.00 0.00 35.95 2.43
2667 2844 7.601856 TCTGTTTACATCCCATTCATGTTTTC 58.398 34.615 0.00 0.00 35.95 2.29
2668 2845 6.696411 TGTTTACATCCCATTCATGTTTTCC 58.304 36.000 0.00 0.00 35.95 3.13
2669 2846 5.930837 TTACATCCCATTCATGTTTTCCC 57.069 39.130 0.00 0.00 35.95 3.97
2670 2847 3.106827 ACATCCCATTCATGTTTTCCCC 58.893 45.455 0.00 0.00 29.75 4.81
2671 2848 2.246091 TCCCATTCATGTTTTCCCCC 57.754 50.000 0.00 0.00 0.00 5.40
2710 2891 2.223665 GCTTTATGCAGGGTCTGATTGC 60.224 50.000 0.00 5.24 42.31 3.56
2729 2910 1.901591 CGGGCAGATGCTTGGATATT 58.098 50.000 4.59 0.00 41.70 1.28
2770 2951 2.023501 AGTCTTGGCTCCTCTACTGGAT 60.024 50.000 0.00 0.00 35.30 3.41
2866 3047 7.104974 AGGTCCTCAAGAGTTATATAGGCTA 57.895 40.000 0.00 0.00 0.00 3.93
2884 3065 6.360370 AGGCTACTCTCTTGTTGAATAACA 57.640 37.500 0.00 0.00 44.66 2.41
2885 3066 6.951971 AGGCTACTCTCTTGTTGAATAACAT 58.048 36.000 0.00 0.00 45.56 2.71
2886 3067 7.398024 AGGCTACTCTCTTGTTGAATAACATT 58.602 34.615 0.00 0.00 45.56 2.71
2887 3068 7.885399 AGGCTACTCTCTTGTTGAATAACATTT 59.115 33.333 0.00 0.00 45.56 2.32
2888 3069 8.515414 GGCTACTCTCTTGTTGAATAACATTTT 58.485 33.333 0.00 0.00 45.56 1.82
2889 3070 9.899226 GCTACTCTCTTGTTGAATAACATTTTT 57.101 29.630 0.00 0.00 45.56 1.94
2911 3092 4.868450 TTTCTCGAGAAAACGCAAAAGA 57.132 36.364 32.77 10.98 40.68 2.52
2912 3093 3.854286 TCTCGAGAAAACGCAAAAGAC 57.146 42.857 14.01 0.00 0.00 3.01
2913 3094 2.542595 TCTCGAGAAAACGCAAAAGACC 59.457 45.455 14.01 0.00 0.00 3.85
2914 3095 2.544267 CTCGAGAAAACGCAAAAGACCT 59.456 45.455 6.58 0.00 0.00 3.85
2915 3096 2.940410 TCGAGAAAACGCAAAAGACCTT 59.060 40.909 0.00 0.00 0.00 3.50
2916 3097 3.375922 TCGAGAAAACGCAAAAGACCTTT 59.624 39.130 0.00 0.00 0.00 3.11
2917 3098 3.482110 CGAGAAAACGCAAAAGACCTTTG 59.518 43.478 0.00 0.00 46.20 2.77
2928 3109 6.197788 CAAAAGACCTTTGCGTTTCATTAC 57.802 37.500 0.00 0.00 38.17 1.89
2929 3110 5.508200 AAAGACCTTTGCGTTTCATTACA 57.492 34.783 0.00 0.00 0.00 2.41
2930 3111 5.705609 AAGACCTTTGCGTTTCATTACAT 57.294 34.783 0.00 0.00 0.00 2.29
2931 3112 5.705609 AGACCTTTGCGTTTCATTACATT 57.294 34.783 0.00 0.00 0.00 2.71
2932 3113 5.460646 AGACCTTTGCGTTTCATTACATTG 58.539 37.500 0.00 0.00 0.00 2.82
2933 3114 5.240623 AGACCTTTGCGTTTCATTACATTGA 59.759 36.000 0.00 0.00 0.00 2.57
2934 3115 5.837437 ACCTTTGCGTTTCATTACATTGAA 58.163 33.333 0.00 0.00 33.89 2.69
2935 3116 6.276847 ACCTTTGCGTTTCATTACATTGAAA 58.723 32.000 0.00 0.00 41.92 2.69
2936 3117 6.758886 ACCTTTGCGTTTCATTACATTGAAAA 59.241 30.769 1.52 0.00 44.71 2.29
2937 3118 7.042791 ACCTTTGCGTTTCATTACATTGAAAAG 60.043 33.333 8.01 8.01 44.71 2.27
2938 3119 7.168972 CCTTTGCGTTTCATTACATTGAAAAGA 59.831 33.333 14.20 1.23 44.71 2.52
2939 3120 8.586570 TTTGCGTTTCATTACATTGAAAAGAT 57.413 26.923 14.20 0.00 44.71 2.40
2940 3121 9.684448 TTTGCGTTTCATTACATTGAAAAGATA 57.316 25.926 14.20 3.05 44.71 1.98
2941 3122 8.894409 TGCGTTTCATTACATTGAAAAGATAG 57.106 30.769 14.20 2.15 44.71 2.08
2942 3123 7.967854 TGCGTTTCATTACATTGAAAAGATAGG 59.032 33.333 14.20 0.00 44.71 2.57
2943 3124 7.432252 GCGTTTCATTACATTGAAAAGATAGGG 59.568 37.037 14.20 0.00 44.71 3.53
2944 3125 8.673711 CGTTTCATTACATTGAAAAGATAGGGA 58.326 33.333 6.93 0.00 44.71 4.20
2946 3127 9.753674 TTTCATTACATTGAAAAGATAGGGAGT 57.246 29.630 0.00 0.00 41.39 3.85
2947 3128 8.964476 TCATTACATTGAAAAGATAGGGAGTC 57.036 34.615 0.00 0.00 0.00 3.36
2948 3129 7.710907 TCATTACATTGAAAAGATAGGGAGTCG 59.289 37.037 0.00 0.00 0.00 4.18
2949 3130 4.770795 ACATTGAAAAGATAGGGAGTCGG 58.229 43.478 0.00 0.00 0.00 4.79
2950 3131 4.225267 ACATTGAAAAGATAGGGAGTCGGT 59.775 41.667 0.00 0.00 0.00 4.69
2951 3132 4.903045 TTGAAAAGATAGGGAGTCGGTT 57.097 40.909 0.00 0.00 0.00 4.44
2952 3133 6.070424 ACATTGAAAAGATAGGGAGTCGGTTA 60.070 38.462 0.00 0.00 0.00 2.85
2953 3134 5.334724 TGAAAAGATAGGGAGTCGGTTAC 57.665 43.478 0.00 0.00 0.00 2.50
2954 3135 4.773674 TGAAAAGATAGGGAGTCGGTTACA 59.226 41.667 0.00 0.00 0.00 2.41
2955 3136 5.105473 TGAAAAGATAGGGAGTCGGTTACAG 60.105 44.000 0.00 0.00 0.00 2.74
2956 3137 3.666345 AGATAGGGAGTCGGTTACAGT 57.334 47.619 0.00 0.00 0.00 3.55
2957 3138 3.553904 AGATAGGGAGTCGGTTACAGTC 58.446 50.000 0.00 0.00 0.00 3.51
2958 3139 1.742761 TAGGGAGTCGGTTACAGTCG 58.257 55.000 0.00 0.00 0.00 4.18
2959 3140 0.251077 AGGGAGTCGGTTACAGTCGT 60.251 55.000 0.00 0.00 0.00 4.34
2960 3141 0.169894 GGGAGTCGGTTACAGTCGTC 59.830 60.000 0.00 0.00 0.00 4.20
2961 3142 0.179205 GGAGTCGGTTACAGTCGTCG 60.179 60.000 0.00 0.00 0.00 5.12
2962 3143 0.514691 GAGTCGGTTACAGTCGTCGT 59.485 55.000 0.00 0.00 0.00 4.34
2963 3144 1.726791 GAGTCGGTTACAGTCGTCGTA 59.273 52.381 0.00 0.00 0.00 3.43
2964 3145 1.728971 AGTCGGTTACAGTCGTCGTAG 59.271 52.381 0.00 0.00 0.00 3.51
2965 3146 1.078709 TCGGTTACAGTCGTCGTAGG 58.921 55.000 0.00 0.00 0.00 3.18
2966 3147 1.078709 CGGTTACAGTCGTCGTAGGA 58.921 55.000 0.00 0.00 0.00 2.94
2967 3148 1.201965 CGGTTACAGTCGTCGTAGGAC 60.202 57.143 5.47 5.47 39.89 3.85
3036 3217 8.948631 TTAGTGATGAATAAACTAGCCTTGAG 57.051 34.615 0.00 0.00 0.00 3.02
3046 3227 3.368571 GCCTTGAGCACCTGTGGC 61.369 66.667 0.00 0.00 42.97 5.01
3092 3273 1.284491 TGCCATCTTAGTGAATGCCCA 59.716 47.619 0.00 0.00 0.00 5.36
3144 3325 3.118629 CCTGCATAGTCAGGCTTCAAGTA 60.119 47.826 0.00 0.00 46.11 2.24
3159 3340 6.920210 GGCTTCAAGTATTAATTTGGATGCTC 59.080 38.462 0.00 0.00 0.00 4.26
3175 3356 3.616956 TGCTCCACTTGGATAGAACAG 57.383 47.619 0.00 0.00 44.46 3.16
3179 3360 3.937706 CTCCACTTGGATAGAACAGCTTG 59.062 47.826 0.00 0.00 44.46 4.01
3241 3422 9.448438 TCTCACATTTTAGCTAATTTTCTGCTA 57.552 29.630 7.08 0.00 38.15 3.49
3290 3471 4.641645 CCTGGCGCAGTGGTGGAA 62.642 66.667 10.83 0.00 0.00 3.53
3323 3504 1.360393 TGCCAAGAGGTCCTGGGTTT 61.360 55.000 0.00 0.00 38.32 3.27
3414 3596 1.601759 CACCTGGTGTGGGAGCTTG 60.602 63.158 18.76 0.00 41.52 4.01
3494 3677 3.492313 CTGTTCTGCGTTAATTTCAGCC 58.508 45.455 0.00 0.00 0.00 4.85
3496 3679 0.446222 TCTGCGTTAATTTCAGCCGC 59.554 50.000 0.00 0.00 44.27 6.53
3533 3716 5.699097 TGTTAATGACTTTAGGTGGTTGC 57.301 39.130 0.00 0.00 0.00 4.17
3559 3742 7.920682 CCTTGTGTCTGTAATTTAAGCTGTTTT 59.079 33.333 0.00 0.00 0.00 2.43
3560 3743 8.850454 TTGTGTCTGTAATTTAAGCTGTTTTC 57.150 30.769 0.00 0.00 0.00 2.29
3861 4177 2.358737 GTCACTGGAAGCCCACGG 60.359 66.667 0.00 0.00 37.58 4.94
3915 4231 7.981789 ACACATATACTCTGGTGTAAACAGATG 59.018 37.037 0.00 0.00 43.43 2.90
4255 4574 1.894466 CTTGACAATGTGCCCATCCAA 59.106 47.619 0.00 0.00 0.00 3.53
4265 4584 3.073209 TGTGCCCATCCAACTAACTTGTA 59.927 43.478 0.00 0.00 0.00 2.41
4398 4717 4.082081 TGCAAGATACCAGGCAAATTTCAG 60.082 41.667 0.00 0.00 32.54 3.02
4636 4955 3.062763 GCTCCTGATGTCCATAATGTCG 58.937 50.000 0.00 0.00 0.00 4.35
4889 5217 8.208903 TGTAATAACCTAGCCCTACTCATTTTC 58.791 37.037 0.00 0.00 0.00 2.29
5116 5444 9.243637 TCTTATTGTGCAAAAGTATGTTGTTTC 57.756 29.630 0.00 0.00 35.15 2.78
5195 5523 7.909518 TGTTGCTACTTAGGGAAGTTATACAA 58.090 34.615 0.00 0.00 43.70 2.41
5227 5555 5.583854 GGATTGGCAGTAGCACATCTATATG 59.416 44.000 0.00 0.00 44.61 1.78
5283 5782 3.181443 CCACACCAGGGGAAGGATTATAC 60.181 52.174 0.00 0.00 0.00 1.47
5377 5876 2.762327 GGCCATCAAACCATGTCAATCT 59.238 45.455 0.00 0.00 0.00 2.40
5474 5973 7.436118 ACGTCACTGTTAACTACCTGATTAAA 58.564 34.615 7.22 0.00 0.00 1.52
5480 5979 9.398538 ACTGTTAACTACCTGATTAAAACACAA 57.601 29.630 7.22 0.00 0.00 3.33
5515 6014 7.582667 ACCTAATATCAAGTGGGCAATTAAC 57.417 36.000 0.00 0.00 0.00 2.01
5606 6110 2.148916 TCAGTGCGAACTTGGTAGTG 57.851 50.000 0.00 0.00 34.01 2.74
5639 6143 1.097232 ACATTGCATCCACACATCCG 58.903 50.000 0.00 0.00 0.00 4.18
5775 6279 5.852282 ATCCATAATGTTTGCCTACCAAC 57.148 39.130 0.00 0.00 31.97 3.77
5803 6307 7.047891 TCAGAGAAAATGATGTGGGTATACAC 58.952 38.462 5.01 0.62 41.68 2.90
5851 6355 5.520288 CCCAACAACTTCTGAGTATGATACG 59.480 44.000 0.00 0.00 34.21 3.06
5917 6421 9.453572 AGAAACATGTAATCTTGCTCTAATTGA 57.546 29.630 0.00 0.00 0.00 2.57
5952 6456 5.292765 CCTGAGAACATGTATTAGCATCGT 58.707 41.667 0.00 0.00 0.00 3.73
5953 6457 5.755375 CCTGAGAACATGTATTAGCATCGTT 59.245 40.000 0.00 0.00 0.00 3.85
5961 6465 6.592220 ACATGTATTAGCATCGTTGTGTTACA 59.408 34.615 0.00 0.65 0.00 2.41
5974 6478 6.200665 TCGTTGTGTTACATTGTAACTACCAC 59.799 38.462 29.95 24.71 0.00 4.16
6016 6520 9.362151 AGTGTTCTATTCAATTTTAGGTTTCCA 57.638 29.630 0.00 0.00 0.00 3.53
6028 6532 7.654022 TTTTAGGTTTCCATCAGAAGTTGTT 57.346 32.000 0.00 0.00 35.40 2.83
6062 6573 3.589988 AGTCTCGAGGCATTGTTAACAG 58.410 45.455 20.97 0.00 0.00 3.16
6086 6602 8.506437 CAGAGTGTTTCTATGCAAGAATACAAA 58.494 33.333 17.25 3.85 43.75 2.83
6165 6681 2.159240 TGATCAACTACCAGCTACTGCG 60.159 50.000 0.00 0.00 45.42 5.18
6190 6706 3.728845 TGTTTTTCTCTCTGCGCTAACT 58.271 40.909 9.73 0.00 0.00 2.24
6213 6729 8.034058 ACTTGCAGTTGATTTCTATACTCAAC 57.966 34.615 6.55 6.55 45.75 3.18
6241 6757 9.022884 TGGTTTTCTCAATGAATATCACATTCA 57.977 29.630 2.42 2.42 41.59 2.57
6482 6998 5.128205 TCCAATATGGCTGATGAACTTCTG 58.872 41.667 0.00 0.00 37.47 3.02
6563 7079 4.412796 TCCATCCAACAGTCTGATGATC 57.587 45.455 11.46 0.00 38.49 2.92
6568 7084 3.763897 TCCAACAGTCTGATGATCGAGAA 59.236 43.478 11.46 0.00 0.00 2.87
6612 7128 6.968131 TTTCTAAACGGTGATCAAGATCTG 57.032 37.500 11.04 0.00 38.60 2.90
7076 7592 9.134055 TCAATTCAACTGATATTGGCATGAATA 57.866 29.630 8.59 0.00 35.60 1.75
7085 7601 9.999009 CTGATATTGGCATGAATATATGTGTTC 57.001 33.333 0.00 0.00 30.18 3.18
7135 7651 8.265764 ACCCTTGACTATACTATTTCTTGGTTC 58.734 37.037 0.00 0.00 0.00 3.62
7250 7766 9.928236 GAAAAGATATTCTCTTGCATACACTTC 57.072 33.333 0.00 0.00 43.60 3.01
7251 7767 7.706281 AAGATATTCTCTTGCATACACTTCG 57.294 36.000 0.00 0.00 42.76 3.79
7457 7974 5.579511 GCTTTTCACGCAGTACCTATCTTAA 59.420 40.000 0.00 0.00 41.61 1.85
7673 8190 2.903855 CATGGATCCGTGCTGGGC 60.904 66.667 20.90 0.00 38.76 5.36
8019 8539 4.889832 AGCTTTGCAGTATTATGCTGAC 57.110 40.909 14.27 6.21 46.63 3.51
8114 8634 9.646427 GTGGGATGTAATATTCTCAGAAGTATC 57.354 37.037 0.00 0.00 0.00 2.24
8159 8679 4.897076 TCAGGTACTTGACTTACAGACCAA 59.103 41.667 3.11 0.00 34.60 3.67
8195 8717 5.842619 GCATAACAATGTGCATTTTGTCA 57.157 34.783 15.08 4.30 42.66 3.58
8249 8771 1.202177 ACTGCTTGCACGTTTGAGTTG 60.202 47.619 0.00 0.00 0.00 3.16
8252 8774 1.730176 CTTGCACGTTTGAGTTGACG 58.270 50.000 0.00 0.00 44.34 4.35
8300 8822 6.208797 GGTCTTTTACTTGGCTTCCTTGTAAT 59.791 38.462 0.00 0.00 0.00 1.89
8301 8823 7.306213 GTCTTTTACTTGGCTTCCTTGTAATC 58.694 38.462 0.00 0.00 0.00 1.75
8305 8827 8.871629 TTTACTTGGCTTCCTTGTAATCATTA 57.128 30.769 0.00 0.00 0.00 1.90
8318 8844 8.446273 CCTTGTAATCATTATAGCTTGATTCGG 58.554 37.037 13.34 7.81 40.71 4.30
8335 8861 1.284982 CGGGTGTTCTCTTGCAGACG 61.285 60.000 0.00 0.00 0.00 4.18
8359 8885 4.221482 GCCCCTCTTGATTTTGAAACAGAT 59.779 41.667 0.00 0.00 0.00 2.90
8485 9011 0.962356 CATCCTGCAGGGGTGTCAAC 60.962 60.000 32.23 0.00 41.20 3.18
8560 9086 2.098117 GCATCGCTTGGCATTACTTCTT 59.902 45.455 0.00 0.00 0.00 2.52
8731 9257 6.284891 TGGATTTTTGTCCTGATGGATTTC 57.715 37.500 0.00 0.00 45.29 2.17
8775 9301 4.891992 AAGTGAGCCTAGTTTCTAAGCA 57.108 40.909 0.00 0.00 0.00 3.91
8782 9308 3.984633 GCCTAGTTTCTAAGCAGCGATAG 59.015 47.826 0.00 2.68 0.00 2.08
8871 9399 7.284489 AGACCAAAAGCTGTAACATGTAAAAGA 59.716 33.333 0.00 0.00 0.00 2.52
8876 9404 8.628882 AAAGCTGTAACATGTAAAAGAAACAC 57.371 30.769 0.00 0.00 0.00 3.32
8895 9423 8.362639 AGAAACACTGTTCTTGATATTTGCATT 58.637 29.630 0.00 0.00 34.03 3.56
8896 9424 7.878477 AACACTGTTCTTGATATTTGCATTG 57.122 32.000 0.00 0.00 0.00 2.82
8949 9517 4.280101 TCGTCAGATCTCTAAAAGCTCG 57.720 45.455 0.00 0.00 0.00 5.03
8954 9522 4.116238 CAGATCTCTAAAAGCTCGGAACC 58.884 47.826 0.00 0.00 0.00 3.62
9068 9862 9.172060 AGTTCAATACTAGAAATATAAGGCCCT 57.828 33.333 0.00 0.00 34.56 5.19
9069 9863 9.220767 GTTCAATACTAGAAATATAAGGCCCTG 57.779 37.037 0.00 0.00 0.00 4.45
9070 9864 8.506196 TCAATACTAGAAATATAAGGCCCTGT 57.494 34.615 0.00 0.00 0.00 4.00
9071 9865 8.945193 TCAATACTAGAAATATAAGGCCCTGTT 58.055 33.333 0.00 0.00 0.00 3.16
9072 9866 9.220767 CAATACTAGAAATATAAGGCCCTGTTC 57.779 37.037 0.00 0.00 0.00 3.18
9073 9867 5.855045 ACTAGAAATATAAGGCCCTGTTCG 58.145 41.667 0.00 0.00 0.00 3.95
9074 9868 4.086706 AGAAATATAAGGCCCTGTTCGG 57.913 45.455 0.00 0.00 0.00 4.30
9075 9869 3.458487 AGAAATATAAGGCCCTGTTCGGT 59.542 43.478 0.00 0.00 0.00 4.69
9076 9870 4.657039 AGAAATATAAGGCCCTGTTCGGTA 59.343 41.667 0.00 0.00 0.00 4.02
9077 9871 5.131475 AGAAATATAAGGCCCTGTTCGGTAA 59.869 40.000 0.00 0.00 0.00 2.85
9078 9872 5.578157 AATATAAGGCCCTGTTCGGTAAT 57.422 39.130 0.00 0.00 0.00 1.89
9079 9873 2.702592 TAAGGCCCTGTTCGGTAATG 57.297 50.000 0.00 0.00 0.00 1.90
9080 9874 0.034477 AAGGCCCTGTTCGGTAATGG 60.034 55.000 0.00 0.00 0.00 3.16
9081 9875 1.205460 AGGCCCTGTTCGGTAATGGT 61.205 55.000 0.00 0.00 0.00 3.55
9082 9876 0.746923 GGCCCTGTTCGGTAATGGTC 60.747 60.000 0.00 0.00 0.00 4.02
9083 9877 0.252197 GCCCTGTTCGGTAATGGTCT 59.748 55.000 0.00 0.00 0.00 3.85
9084 9878 2.012051 GCCCTGTTCGGTAATGGTCTG 61.012 57.143 0.00 0.00 0.00 3.51
9085 9879 1.369625 CCTGTTCGGTAATGGTCTGC 58.630 55.000 0.00 0.00 0.00 4.26
9086 9880 1.066143 CCTGTTCGGTAATGGTCTGCT 60.066 52.381 0.00 0.00 0.00 4.24
9087 9881 2.271800 CTGTTCGGTAATGGTCTGCTC 58.728 52.381 0.00 0.00 0.00 4.26
9088 9882 1.066430 TGTTCGGTAATGGTCTGCTCC 60.066 52.381 0.00 0.00 0.00 4.70
9089 9883 0.539986 TTCGGTAATGGTCTGCTCCC 59.460 55.000 0.00 0.00 0.00 4.30
9090 9884 0.616395 TCGGTAATGGTCTGCTCCCA 60.616 55.000 0.00 0.00 36.16 4.37
9091 9885 0.179073 CGGTAATGGTCTGCTCCCAG 60.179 60.000 0.00 0.00 40.54 4.45
9092 9886 1.204146 GGTAATGGTCTGCTCCCAGA 58.796 55.000 0.00 0.00 45.54 3.86
9099 9893 1.519246 TCTGCTCCCAGAATCTGCG 59.481 57.895 4.40 0.00 44.79 5.18
9100 9894 1.523258 CTGCTCCCAGAATCTGCGG 60.523 63.158 4.40 7.99 41.77 5.69
9101 9895 1.964608 CTGCTCCCAGAATCTGCGGA 61.965 60.000 16.09 16.09 41.77 5.54
9102 9896 1.227497 GCTCCCAGAATCTGCGGAG 60.227 63.158 28.33 28.33 44.33 4.63
9103 9897 1.965754 GCTCCCAGAATCTGCGGAGT 61.966 60.000 30.44 0.00 43.88 3.85
9104 9898 0.179089 CTCCCAGAATCTGCGGAGTG 60.179 60.000 26.18 12.74 40.61 3.51
9105 9899 1.153289 CCCAGAATCTGCGGAGTGG 60.153 63.158 0.00 7.31 0.00 4.00
9106 9900 1.153289 CCAGAATCTGCGGAGTGGG 60.153 63.158 0.00 0.00 0.00 4.61
9107 9901 1.599047 CAGAATCTGCGGAGTGGGT 59.401 57.895 0.00 0.00 0.00 4.51
9108 9902 0.036010 CAGAATCTGCGGAGTGGGTT 60.036 55.000 0.00 0.00 0.00 4.11
9109 9903 1.207089 CAGAATCTGCGGAGTGGGTTA 59.793 52.381 0.00 0.00 0.00 2.85
9110 9904 1.906574 AGAATCTGCGGAGTGGGTTAA 59.093 47.619 0.00 0.00 0.00 2.01
9111 9905 2.505819 AGAATCTGCGGAGTGGGTTAAT 59.494 45.455 0.00 0.00 0.00 1.40
9112 9906 2.332063 ATCTGCGGAGTGGGTTAATG 57.668 50.000 3.10 0.00 0.00 1.90
9113 9907 0.251916 TCTGCGGAGTGGGTTAATGG 59.748 55.000 3.10 0.00 0.00 3.16
9114 9908 1.376609 CTGCGGAGTGGGTTAATGGC 61.377 60.000 0.00 0.00 0.00 4.40
9115 9909 1.377987 GCGGAGTGGGTTAATGGCA 60.378 57.895 0.00 0.00 0.00 4.92
9116 9910 0.963355 GCGGAGTGGGTTAATGGCAA 60.963 55.000 0.00 0.00 0.00 4.52
9117 9911 0.808755 CGGAGTGGGTTAATGGCAAC 59.191 55.000 0.00 0.00 0.00 4.17
9118 9912 1.613255 CGGAGTGGGTTAATGGCAACT 60.613 52.381 0.00 0.00 37.61 3.16
9119 9913 2.092323 GGAGTGGGTTAATGGCAACTC 58.908 52.381 4.97 4.97 34.62 3.01
9120 9914 2.092323 GAGTGGGTTAATGGCAACTCC 58.908 52.381 0.00 0.00 37.61 3.85
9132 9926 4.329462 TGGCAACTCCACCATTTTAAAC 57.671 40.909 0.00 0.00 40.72 2.01
9133 9927 3.964031 TGGCAACTCCACCATTTTAAACT 59.036 39.130 0.00 0.00 40.72 2.66
9134 9928 5.141182 TGGCAACTCCACCATTTTAAACTA 58.859 37.500 0.00 0.00 40.72 2.24
9135 9929 5.010213 TGGCAACTCCACCATTTTAAACTAC 59.990 40.000 0.00 0.00 40.72 2.73
9136 9930 5.010213 GGCAACTCCACCATTTTAAACTACA 59.990 40.000 0.00 0.00 34.01 2.74
9137 9931 6.149633 GCAACTCCACCATTTTAAACTACAG 58.850 40.000 0.00 0.00 0.00 2.74
9138 9932 5.959618 ACTCCACCATTTTAAACTACAGC 57.040 39.130 0.00 0.00 0.00 4.40
9139 9933 5.631119 ACTCCACCATTTTAAACTACAGCT 58.369 37.500 0.00 0.00 0.00 4.24
9140 9934 5.705905 ACTCCACCATTTTAAACTACAGCTC 59.294 40.000 0.00 0.00 0.00 4.09
9141 9935 5.007682 TCCACCATTTTAAACTACAGCTCC 58.992 41.667 0.00 0.00 0.00 4.70
9142 9936 4.142687 CCACCATTTTAAACTACAGCTCCG 60.143 45.833 0.00 0.00 0.00 4.63
9143 9937 3.439129 ACCATTTTAAACTACAGCTCCGC 59.561 43.478 0.00 0.00 0.00 5.54
9144 9938 3.181500 CCATTTTAAACTACAGCTCCGCC 60.181 47.826 0.00 0.00 0.00 6.13
9145 9939 2.843401 TTTAAACTACAGCTCCGCCA 57.157 45.000 0.00 0.00 0.00 5.69
9146 9940 2.843401 TTAAACTACAGCTCCGCCAA 57.157 45.000 0.00 0.00 0.00 4.52
9147 9941 2.088950 TAAACTACAGCTCCGCCAAC 57.911 50.000 0.00 0.00 0.00 3.77
9148 9942 0.396811 AAACTACAGCTCCGCCAACT 59.603 50.000 0.00 0.00 0.00 3.16
9149 9943 0.037232 AACTACAGCTCCGCCAACTC 60.037 55.000 0.00 0.00 0.00 3.01
9150 9944 1.153549 CTACAGCTCCGCCAACTCC 60.154 63.158 0.00 0.00 0.00 3.85
9151 9945 2.890847 CTACAGCTCCGCCAACTCCG 62.891 65.000 0.00 0.00 0.00 4.63
9155 9949 4.821589 CTCCGCCAACTCCGCTCC 62.822 72.222 0.00 0.00 0.00 4.70
9166 9960 4.760047 CCGCTCCGGGAGTTGTGG 62.760 72.222 24.30 16.72 44.15 4.17
9167 9961 3.691342 CGCTCCGGGAGTTGTGGA 61.691 66.667 24.30 0.00 31.39 4.02
9169 9963 2.266055 CTCCGGGAGTTGTGGAGC 59.734 66.667 16.15 0.00 42.53 4.70
9170 9964 3.649277 CTCCGGGAGTTGTGGAGCG 62.649 68.421 16.15 0.00 42.53 5.03
9171 9965 3.691342 CCGGGAGTTGTGGAGCGA 61.691 66.667 0.00 0.00 0.00 4.93
9172 9966 2.342279 CGGGAGTTGTGGAGCGAA 59.658 61.111 0.00 0.00 0.00 4.70
9173 9967 1.738099 CGGGAGTTGTGGAGCGAAG 60.738 63.158 0.00 0.00 0.00 3.79
9186 9980 2.170985 CGAAGCGTTGCCGAACAG 59.829 61.111 0.00 0.00 35.63 3.16
9187 9981 2.127232 GAAGCGTTGCCGAACAGC 60.127 61.111 0.00 0.00 35.63 4.40
9188 9982 3.595108 GAAGCGTTGCCGAACAGCC 62.595 63.158 0.00 0.00 34.29 4.85
9192 9986 2.349755 GTTGCCGAACAGCCCCTA 59.650 61.111 0.00 0.00 31.78 3.53
9208 10002 5.542635 CAGCCCCTAAGTATACTCATAACCA 59.457 44.000 5.70 0.00 0.00 3.67
9214 10008 9.139734 CCCTAAGTATACTCATAACCACACTAA 57.860 37.037 5.70 0.00 0.00 2.24
9243 10041 9.414295 GAGTGAAAGAATGATATCAGAGATCAG 57.586 37.037 13.12 0.00 36.77 2.90
9272 10070 5.477984 ACTGGTAAACACGATCAGGTACTAA 59.522 40.000 0.00 0.00 36.02 2.24
9287 10085 5.977129 CAGGTACTAAAAACTGCCACAAAAG 59.023 40.000 0.00 0.00 36.02 2.27
9294 10092 4.944962 AAACTGCCACAAAAGAAAAAGC 57.055 36.364 0.00 0.00 0.00 3.51
9413 10215 4.192429 TGGCATGATCATAGGTACATCG 57.808 45.455 8.15 0.00 0.00 3.84
9444 10246 3.140325 TCTCGACTTGCAAAAAGGGAT 57.860 42.857 0.00 0.00 0.00 3.85
9448 10250 2.293122 CGACTTGCAAAAAGGGATGACA 59.707 45.455 0.00 0.00 0.00 3.58
9492 10294 2.641815 AGACACTTCAATCCCTTCTGCT 59.358 45.455 0.00 0.00 0.00 4.24
9591 10393 0.846015 TAACCATGCATCCTCTGGGG 59.154 55.000 8.12 2.06 34.21 4.96
9596 10398 0.695462 ATGCATCCTCTGGGGCAGTA 60.695 55.000 0.00 0.00 36.99 2.74
9610 10412 1.440893 CAGTAGCTGCGCCTGATCT 59.559 57.895 4.18 0.00 0.00 2.75
9644 10446 5.126067 ACGAATATGCTGTTAAATGCCTCT 58.874 37.500 0.00 0.00 0.00 3.69
9665 10467 3.317571 AGTGCTCTTCGCCTGCCT 61.318 61.111 0.00 0.00 38.05 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.168714 GCGCAGGACTTTGAAGGAAT 58.831 50.000 0.30 0.00 0.00 3.01
547 549 1.754555 CGGGACAGCTAGGGACACTAT 60.755 57.143 0.00 0.00 0.00 2.12
585 589 3.728373 GTCATCAAGGCCCCGGGT 61.728 66.667 21.85 0.00 0.00 5.28
710 719 0.598065 AAATCCGTTGGTGCTCTTGC 59.402 50.000 0.00 0.00 40.20 4.01
711 720 1.200020 GGAAATCCGTTGGTGCTCTTG 59.800 52.381 0.00 0.00 0.00 3.02
712 721 1.534729 GGAAATCCGTTGGTGCTCTT 58.465 50.000 0.00 0.00 0.00 2.85
713 722 3.249687 GGAAATCCGTTGGTGCTCT 57.750 52.632 0.00 0.00 0.00 4.09
724 733 3.694889 CGAAAACCAGCGGAAATCC 57.305 52.632 1.50 0.00 0.00 3.01
731 740 2.116366 CTTTTGAACCGAAAACCAGCG 58.884 47.619 0.00 0.00 0.00 5.18
732 741 2.857748 CACTTTTGAACCGAAAACCAGC 59.142 45.455 0.00 0.00 0.00 4.85
733 742 2.857748 GCACTTTTGAACCGAAAACCAG 59.142 45.455 0.00 0.00 0.00 4.00
734 743 2.417515 GGCACTTTTGAACCGAAAACCA 60.418 45.455 0.00 0.00 0.00 3.67
735 744 2.198406 GGCACTTTTGAACCGAAAACC 58.802 47.619 0.00 0.00 0.00 3.27
736 745 2.198406 GGGCACTTTTGAACCGAAAAC 58.802 47.619 0.00 0.00 0.00 2.43
737 746 1.825474 TGGGCACTTTTGAACCGAAAA 59.175 42.857 0.00 0.00 0.00 2.29
738 747 1.135333 GTGGGCACTTTTGAACCGAAA 59.865 47.619 0.00 0.00 0.00 3.46
739 748 0.741915 GTGGGCACTTTTGAACCGAA 59.258 50.000 0.00 0.00 0.00 4.30
740 749 1.104577 GGTGGGCACTTTTGAACCGA 61.105 55.000 0.00 0.00 0.00 4.69
741 750 1.362355 GGTGGGCACTTTTGAACCG 59.638 57.895 0.00 0.00 0.00 4.44
742 751 1.745890 GGGTGGGCACTTTTGAACC 59.254 57.895 0.00 0.00 0.00 3.62
743 752 0.759060 AGGGGTGGGCACTTTTGAAC 60.759 55.000 0.00 0.00 0.00 3.18
744 753 0.854218 TAGGGGTGGGCACTTTTGAA 59.146 50.000 0.00 0.00 0.00 2.69
745 754 0.111639 GTAGGGGTGGGCACTTTTGA 59.888 55.000 0.00 0.00 0.00 2.69
746 755 0.898326 GGTAGGGGTGGGCACTTTTG 60.898 60.000 0.00 0.00 0.00 2.44
747 756 1.071909 AGGTAGGGGTGGGCACTTTT 61.072 55.000 0.00 0.00 0.00 2.27
748 757 1.465387 AGGTAGGGGTGGGCACTTT 60.465 57.895 0.00 0.00 0.00 2.66
749 758 2.210102 AGGTAGGGGTGGGCACTT 59.790 61.111 0.00 0.00 0.00 3.16
750 759 2.610859 CAGGTAGGGGTGGGCACT 60.611 66.667 0.00 0.00 0.00 4.40
751 760 4.426313 GCAGGTAGGGGTGGGCAC 62.426 72.222 0.00 0.00 0.00 5.01
752 761 4.992982 TGCAGGTAGGGGTGGGCA 62.993 66.667 0.00 0.00 0.00 5.36
753 762 4.115199 CTGCAGGTAGGGGTGGGC 62.115 72.222 5.57 0.00 0.00 5.36
754 763 3.411517 CCTGCAGGTAGGGGTGGG 61.412 72.222 25.53 0.00 34.06 4.61
755 764 4.115199 GCCTGCAGGTAGGGGTGG 62.115 72.222 32.81 6.54 38.32 4.61
756 765 3.329889 TGCCTGCAGGTAGGGGTG 61.330 66.667 32.81 6.29 38.32 4.61
757 766 3.011517 CTGCCTGCAGGTAGGGGT 61.012 66.667 35.87 0.00 43.16 4.95
768 777 4.798344 CTGCCTGGAGCCTGCCTG 62.798 72.222 0.00 0.00 42.71 4.85
808 817 4.233558 GGTTGGGCCTGGGTTGGT 62.234 66.667 4.53 0.00 0.00 3.67
867 888 4.955774 GTGGGCGTGGTCGTTCGT 62.956 66.667 0.00 0.00 39.49 3.85
941 969 1.603739 GAATGGGGAATAGGGGCGC 60.604 63.158 0.00 0.00 0.00 6.53
943 971 0.860457 AAGGAATGGGGAATAGGGGC 59.140 55.000 0.00 0.00 0.00 5.80
947 975 1.545651 GCGGGAAGGAATGGGGAATAG 60.546 57.143 0.00 0.00 0.00 1.73
948 976 0.476771 GCGGGAAGGAATGGGGAATA 59.523 55.000 0.00 0.00 0.00 1.75
949 977 1.230212 GCGGGAAGGAATGGGGAAT 59.770 57.895 0.00 0.00 0.00 3.01
950 978 2.680965 GCGGGAAGGAATGGGGAA 59.319 61.111 0.00 0.00 0.00 3.97
951 979 3.416880 GGCGGGAAGGAATGGGGA 61.417 66.667 0.00 0.00 0.00 4.81
952 980 4.875713 CGGCGGGAAGGAATGGGG 62.876 72.222 0.00 0.00 0.00 4.96
971 1008 3.827898 GGACAGGACGGGAGCGAG 61.828 72.222 0.00 0.00 0.00 5.03
976 1013 2.037367 CTGGAGGACAGGACGGGA 59.963 66.667 0.00 0.00 43.70 5.14
985 1022 2.750657 CCATGGAGGGCTGGAGGAC 61.751 68.421 5.56 0.00 34.24 3.85
986 1023 2.367377 CCATGGAGGGCTGGAGGA 60.367 66.667 5.56 0.00 34.24 3.71
994 1031 3.907130 GGATGGGGCCATGGAGGG 61.907 72.222 18.40 0.00 36.70 4.30
1478 1539 1.005394 GTCGTCGGCCTGGAGAAAA 60.005 57.895 0.00 0.00 0.00 2.29
1634 1713 3.876914 GAGAAGTGTGTGAATGTGTGGAA 59.123 43.478 0.00 0.00 0.00 3.53
1644 1735 1.068588 CGGGTTCAGAGAAGTGTGTGA 59.931 52.381 0.00 0.00 0.00 3.58
1667 1758 2.430465 ACGAGCACTCAATGAGCATTT 58.570 42.857 10.62 0.00 34.66 2.32
1741 1832 6.364701 AGCTGGATATTTAGGCATTACACAA 58.635 36.000 0.00 0.00 0.00 3.33
1745 1836 6.595716 CAGGTAGCTGGATATTTAGGCATTAC 59.404 42.308 14.29 0.00 0.00 1.89
1757 1848 0.031111 AGTGGGCAGGTAGCTGGATA 60.031 55.000 22.69 0.00 44.79 2.59
1790 1902 1.134580 AGGGAAGCACATCGACATGAG 60.135 52.381 0.00 0.00 33.72 2.90
1797 1909 0.957395 ACAAGCAGGGAAGCACATCG 60.957 55.000 0.00 0.00 36.85 3.84
1835 1947 2.280389 ACAGTGCAGCACGTGAGG 60.280 61.111 22.23 11.30 39.64 3.86
1876 1988 2.951229 TTTCCCCCTGTCTTCAAGTC 57.049 50.000 0.00 0.00 0.00 3.01
1877 1989 3.566351 CTTTTTCCCCCTGTCTTCAAGT 58.434 45.455 0.00 0.00 0.00 3.16
1880 1992 1.499007 AGCTTTTTCCCCCTGTCTTCA 59.501 47.619 0.00 0.00 0.00 3.02
1881 1993 1.889170 CAGCTTTTTCCCCCTGTCTTC 59.111 52.381 0.00 0.00 0.00 2.87
1882 1994 1.217942 ACAGCTTTTTCCCCCTGTCTT 59.782 47.619 0.00 0.00 33.57 3.01
1884 1996 1.248486 GACAGCTTTTTCCCCCTGTC 58.752 55.000 4.17 4.17 44.84 3.51
1885 1997 0.555769 TGACAGCTTTTTCCCCCTGT 59.444 50.000 0.00 0.00 40.92 4.00
1886 1998 1.202927 TCTGACAGCTTTTTCCCCCTG 60.203 52.381 0.00 0.00 0.00 4.45
1887 1999 1.149101 TCTGACAGCTTTTTCCCCCT 58.851 50.000 0.00 0.00 0.00 4.79
1890 2002 6.018751 GTCAAAATTTCTGACAGCTTTTTCCC 60.019 38.462 19.68 0.00 42.32 3.97
1891 2003 6.758416 AGTCAAAATTTCTGACAGCTTTTTCC 59.242 34.615 23.38 0.00 44.68 3.13
1892 2004 7.761651 AGTCAAAATTTCTGACAGCTTTTTC 57.238 32.000 23.38 1.30 44.68 2.29
1896 2008 6.096001 AGTGAAGTCAAAATTTCTGACAGCTT 59.904 34.615 23.38 14.98 44.68 3.74
1901 2018 8.778358 AGACATAGTGAAGTCAAAATTTCTGAC 58.222 33.333 18.14 18.14 42.95 3.51
1910 2027 6.582636 AGACAACAGACATAGTGAAGTCAAA 58.417 36.000 0.00 0.00 37.23 2.69
1912 2029 5.562890 CGAGACAACAGACATAGTGAAGTCA 60.563 44.000 0.00 0.00 37.23 3.41
1918 2035 3.577649 ACCGAGACAACAGACATAGTG 57.422 47.619 0.00 0.00 0.00 2.74
1943 2060 7.347222 ACATGAACTAGTCACCCATTATCCTAA 59.653 37.037 0.00 0.00 39.72 2.69
1952 2069 8.472007 AAATTTTTACATGAACTAGTCACCCA 57.528 30.769 0.00 0.00 39.72 4.51
1953 2070 9.836076 GTAAATTTTTACATGAACTAGTCACCC 57.164 33.333 0.00 0.00 41.93 4.61
1983 2100 7.147724 GCTTGGTATGCATCCCAGTATATACTA 60.148 40.741 15.03 0.68 34.13 1.82
1984 2101 6.352222 GCTTGGTATGCATCCCAGTATATACT 60.352 42.308 11.22 9.71 36.90 2.12
1985 2102 5.817816 GCTTGGTATGCATCCCAGTATATAC 59.182 44.000 11.22 4.60 31.04 1.47
1986 2103 5.487131 TGCTTGGTATGCATCCCAGTATATA 59.513 40.000 11.22 0.00 35.31 0.86
1987 2104 4.289410 TGCTTGGTATGCATCCCAGTATAT 59.711 41.667 11.22 0.00 35.31 0.86
1990 2165 1.843206 TGCTTGGTATGCATCCCAGTA 59.157 47.619 11.22 6.96 35.31 2.74
2015 2191 9.764363 TCAGAACATTATAGCATTGGTAAGTAG 57.236 33.333 0.00 0.00 0.00 2.57
2104 2281 3.214696 AGGCTGCTCTGTGTTAACTTT 57.785 42.857 7.22 0.00 0.00 2.66
2167 2344 2.289694 ACCGTTGTTCAAGATCTCTGGG 60.290 50.000 0.00 0.00 0.00 4.45
2173 2350 2.400399 TCGTCACCGTTGTTCAAGATC 58.600 47.619 0.00 0.00 35.01 2.75
2176 2353 0.859232 CCTCGTCACCGTTGTTCAAG 59.141 55.000 0.00 0.00 35.01 3.02
2290 2467 4.555262 GCAGGCAACAAGTTAATAAAGCA 58.445 39.130 0.00 0.00 41.41 3.91
2303 2480 2.124529 TGAACCACGCAGGCAACA 60.125 55.556 0.00 0.00 43.14 3.33
2313 2490 1.620822 AGAAATGCCAGGTGAACCAC 58.379 50.000 1.62 0.00 38.89 4.16
2352 2529 1.670967 GCAAGCCAGCATTTGAAGGTC 60.671 52.381 0.00 0.00 0.00 3.85
2404 2581 0.251832 AGGAAGAGGCCTTCTCGACA 60.252 55.000 6.77 0.00 46.16 4.35
2429 2606 3.193267 ACAGAAGTTGTTGCTGCTGAAAA 59.807 39.130 7.96 0.00 43.30 2.29
2439 2616 6.082338 GCATCAATACTGACAGAAGTTGTTG 58.918 40.000 10.08 14.71 41.05 3.33
2458 2635 0.391528 CCACGTCTGGACATGCATCA 60.392 55.000 0.00 0.00 40.55 3.07
2475 2652 1.754803 CTACCGTGGTGCTAGAATCCA 59.245 52.381 0.72 0.00 0.00 3.41
2551 2728 0.106519 AGACAGTAATGCCCATGCCC 60.107 55.000 0.00 0.00 36.33 5.36
2569 2746 1.936547 GCATTCTGCGGGTCTCTTAAG 59.063 52.381 0.00 0.00 31.71 1.85
2570 2747 1.406887 GGCATTCTGCGGGTCTCTTAA 60.407 52.381 0.00 0.00 46.21 1.85
2581 2758 1.093159 CAGAGTCCTTGGCATTCTGC 58.907 55.000 0.00 0.00 44.08 4.26
2597 2774 2.106338 TGGAAACCTTGACAGCATCAGA 59.894 45.455 0.00 0.00 38.99 3.27
2648 2825 4.285863 GGGGAAAACATGAATGGGATGTA 58.714 43.478 0.00 0.00 32.74 2.29
2664 2841 4.855599 CCTATCCATGGTATTAGGGGGAAA 59.144 45.833 21.10 0.00 0.00 3.13
2665 2842 4.140057 ACCTATCCATGGTATTAGGGGGAA 60.140 45.833 27.15 4.09 35.80 3.97
2666 2843 3.411746 ACCTATCCATGGTATTAGGGGGA 59.588 47.826 27.15 4.52 35.80 4.81
2667 2844 3.523564 CACCTATCCATGGTATTAGGGGG 59.476 52.174 27.15 19.85 35.80 5.40
2668 2845 3.054361 GCACCTATCCATGGTATTAGGGG 60.054 52.174 27.15 25.83 35.80 4.79
2669 2846 3.846588 AGCACCTATCCATGGTATTAGGG 59.153 47.826 27.15 20.65 35.80 3.53
2670 2847 5.505181 AAGCACCTATCCATGGTATTAGG 57.495 43.478 24.44 24.44 35.80 2.69
2671 2848 7.066284 GCATAAAGCACCTATCCATGGTATTAG 59.934 40.741 12.58 11.18 44.79 1.73
2707 2888 2.842188 ATCCAAGCATCTGCCCGCAA 62.842 55.000 0.00 0.00 43.38 4.85
2710 2891 1.901591 AATATCCAAGCATCTGCCCG 58.098 50.000 0.00 0.00 43.38 6.13
2770 2951 6.372937 TCACCTCGCATTCAATAAAATGTGTA 59.627 34.615 9.28 0.00 44.02 2.90
2812 2993 7.564793 ACTGTATGCCATATTACACTTCTTCA 58.435 34.615 0.00 0.00 0.00 3.02
2890 3071 4.495184 GGTCTTTTGCGTTTTCTCGAGAAA 60.495 41.667 31.62 31.62 41.77 2.52
2891 3072 3.001939 GGTCTTTTGCGTTTTCTCGAGAA 59.998 43.478 23.74 23.74 0.00 2.87
2892 3073 2.542595 GGTCTTTTGCGTTTTCTCGAGA 59.457 45.455 12.08 12.08 0.00 4.04
2893 3074 2.544267 AGGTCTTTTGCGTTTTCTCGAG 59.456 45.455 5.93 5.93 0.00 4.04
2894 3075 2.557317 AGGTCTTTTGCGTTTTCTCGA 58.443 42.857 0.00 0.00 0.00 4.04
2895 3076 3.334272 AAGGTCTTTTGCGTTTTCTCG 57.666 42.857 0.00 0.00 0.00 4.04
2906 3087 5.897050 TGTAATGAAACGCAAAGGTCTTTT 58.103 33.333 0.00 0.00 0.00 2.27
2907 3088 5.508200 TGTAATGAAACGCAAAGGTCTTT 57.492 34.783 0.00 0.00 0.00 2.52
2908 3089 5.705609 ATGTAATGAAACGCAAAGGTCTT 57.294 34.783 0.00 0.00 0.00 3.01
2909 3090 5.240623 TCAATGTAATGAAACGCAAAGGTCT 59.759 36.000 0.00 0.00 0.00 3.85
2910 3091 5.457140 TCAATGTAATGAAACGCAAAGGTC 58.543 37.500 0.00 0.00 0.00 3.85
2911 3092 5.446143 TCAATGTAATGAAACGCAAAGGT 57.554 34.783 0.00 0.00 0.00 3.50
2912 3093 6.761731 TTTCAATGTAATGAAACGCAAAGG 57.238 33.333 0.00 0.00 42.68 3.11
2913 3094 8.060020 TCTTTTCAATGTAATGAAACGCAAAG 57.940 30.769 2.20 0.00 46.06 2.77
2914 3095 7.993821 TCTTTTCAATGTAATGAAACGCAAA 57.006 28.000 2.20 0.00 46.06 3.68
2915 3096 9.340695 CTATCTTTTCAATGTAATGAAACGCAA 57.659 29.630 2.20 0.00 46.06 4.85
2916 3097 7.967854 CCTATCTTTTCAATGTAATGAAACGCA 59.032 33.333 2.20 0.00 46.06 5.24
2917 3098 7.432252 CCCTATCTTTTCAATGTAATGAAACGC 59.568 37.037 2.20 0.00 46.06 4.84
2918 3099 8.673711 TCCCTATCTTTTCAATGTAATGAAACG 58.326 33.333 2.20 1.68 46.06 3.60
2920 3101 9.753674 ACTCCCTATCTTTTCAATGTAATGAAA 57.246 29.630 0.00 0.00 45.07 2.69
2921 3102 9.396022 GACTCCCTATCTTTTCAATGTAATGAA 57.604 33.333 0.00 0.00 37.53 2.57
2922 3103 7.710907 CGACTCCCTATCTTTTCAATGTAATGA 59.289 37.037 0.00 0.00 0.00 2.57
2923 3104 7.041780 CCGACTCCCTATCTTTTCAATGTAATG 60.042 40.741 0.00 0.00 0.00 1.90
2924 3105 6.992715 CCGACTCCCTATCTTTTCAATGTAAT 59.007 38.462 0.00 0.00 0.00 1.89
2925 3106 6.070424 ACCGACTCCCTATCTTTTCAATGTAA 60.070 38.462 0.00 0.00 0.00 2.41
2926 3107 5.424252 ACCGACTCCCTATCTTTTCAATGTA 59.576 40.000 0.00 0.00 0.00 2.29
2927 3108 4.225267 ACCGACTCCCTATCTTTTCAATGT 59.775 41.667 0.00 0.00 0.00 2.71
2928 3109 4.770795 ACCGACTCCCTATCTTTTCAATG 58.229 43.478 0.00 0.00 0.00 2.82
2929 3110 5.437191 AACCGACTCCCTATCTTTTCAAT 57.563 39.130 0.00 0.00 0.00 2.57
2930 3111 4.903045 AACCGACTCCCTATCTTTTCAA 57.097 40.909 0.00 0.00 0.00 2.69
2931 3112 4.773674 TGTAACCGACTCCCTATCTTTTCA 59.226 41.667 0.00 0.00 0.00 2.69
2932 3113 5.105432 ACTGTAACCGACTCCCTATCTTTTC 60.105 44.000 0.00 0.00 0.00 2.29
2933 3114 4.776308 ACTGTAACCGACTCCCTATCTTTT 59.224 41.667 0.00 0.00 0.00 2.27
2934 3115 4.351127 ACTGTAACCGACTCCCTATCTTT 58.649 43.478 0.00 0.00 0.00 2.52
2935 3116 3.952967 GACTGTAACCGACTCCCTATCTT 59.047 47.826 0.00 0.00 0.00 2.40
2936 3117 3.553904 GACTGTAACCGACTCCCTATCT 58.446 50.000 0.00 0.00 0.00 1.98
2937 3118 2.290093 CGACTGTAACCGACTCCCTATC 59.710 54.545 0.00 0.00 0.00 2.08
2938 3119 2.295885 CGACTGTAACCGACTCCCTAT 58.704 52.381 0.00 0.00 0.00 2.57
2939 3120 1.003580 ACGACTGTAACCGACTCCCTA 59.996 52.381 0.00 0.00 0.00 3.53
2940 3121 0.251077 ACGACTGTAACCGACTCCCT 60.251 55.000 0.00 0.00 0.00 4.20
2941 3122 0.169894 GACGACTGTAACCGACTCCC 59.830 60.000 0.00 0.00 0.00 4.30
2942 3123 0.179205 CGACGACTGTAACCGACTCC 60.179 60.000 0.00 0.00 0.00 3.85
2943 3124 0.514691 ACGACGACTGTAACCGACTC 59.485 55.000 0.00 0.00 0.00 3.36
2944 3125 1.728971 CTACGACGACTGTAACCGACT 59.271 52.381 0.00 0.00 0.00 4.18
2945 3126 1.201965 CCTACGACGACTGTAACCGAC 60.202 57.143 0.00 0.00 0.00 4.79
2946 3127 1.078709 CCTACGACGACTGTAACCGA 58.921 55.000 0.00 0.00 0.00 4.69
2947 3128 1.078709 TCCTACGACGACTGTAACCG 58.921 55.000 0.00 0.00 0.00 4.44
2948 3129 2.534231 GTCCTACGACGACTGTAACC 57.466 55.000 0.00 0.00 0.00 2.85
2958 3139 8.309484 TGTTATTCAACTGATTCGTCCTACGAC 61.309 40.741 0.94 0.00 41.84 4.34
2959 3140 6.349528 TGTTATTCAACTGATTCGTCCTACGA 60.350 38.462 0.00 0.00 41.10 3.43
2960 3141 5.803461 TGTTATTCAACTGATTCGTCCTACG 59.197 40.000 0.00 0.00 38.02 3.51
2961 3142 7.772332 ATGTTATTCAACTGATTCGTCCTAC 57.228 36.000 0.00 0.00 35.56 3.18
2962 3143 9.476202 CATATGTTATTCAACTGATTCGTCCTA 57.524 33.333 0.00 0.00 35.56 2.94
2963 3144 7.041780 GCATATGTTATTCAACTGATTCGTCCT 60.042 37.037 4.29 0.00 35.56 3.85
2964 3145 7.072030 GCATATGTTATTCAACTGATTCGTCC 58.928 38.462 4.29 0.00 35.56 4.79
2965 3146 7.072030 GGCATATGTTATTCAACTGATTCGTC 58.928 38.462 4.29 0.00 35.56 4.20
2966 3147 6.292865 CGGCATATGTTATTCAACTGATTCGT 60.293 38.462 4.29 0.00 35.56 3.85
2967 3148 6.073369 CGGCATATGTTATTCAACTGATTCG 58.927 40.000 4.29 0.00 35.56 3.34
2968 3149 6.959361 ACGGCATATGTTATTCAACTGATTC 58.041 36.000 4.29 0.00 35.56 2.52
2969 3150 6.542005 TGACGGCATATGTTATTCAACTGATT 59.458 34.615 4.29 0.00 35.56 2.57
2970 3151 6.054941 TGACGGCATATGTTATTCAACTGAT 58.945 36.000 4.29 0.00 35.56 2.90
2971 3152 5.423886 TGACGGCATATGTTATTCAACTGA 58.576 37.500 4.29 0.00 35.56 3.41
2972 3153 5.733226 TGACGGCATATGTTATTCAACTG 57.267 39.130 4.29 0.00 35.56 3.16
2973 3154 5.880332 AGTTGACGGCATATGTTATTCAACT 59.120 36.000 23.81 23.81 44.21 3.16
2974 3155 6.119144 AGTTGACGGCATATGTTATTCAAC 57.881 37.500 21.53 21.53 40.98 3.18
2975 3156 6.751514 AAGTTGACGGCATATGTTATTCAA 57.248 33.333 4.29 5.94 0.00 2.69
2976 3157 6.751514 AAAGTTGACGGCATATGTTATTCA 57.248 33.333 4.29 0.00 0.00 2.57
2977 3158 6.844279 CGTAAAGTTGACGGCATATGTTATTC 59.156 38.462 4.71 0.00 36.66 1.75
2978 3159 6.711579 CGTAAAGTTGACGGCATATGTTATT 58.288 36.000 4.71 0.00 36.66 1.40
2979 3160 5.277154 GCGTAAAGTTGACGGCATATGTTAT 60.277 40.000 14.60 0.00 40.66 1.89
2980 3161 4.033129 GCGTAAAGTTGACGGCATATGTTA 59.967 41.667 14.60 0.00 40.66 2.41
3036 3217 0.536006 AGAGAACTTGCCACAGGTGC 60.536 55.000 0.00 0.00 0.00 5.01
3046 3227 7.382110 TGGAGTGAGATTTCTAAGAGAACTTG 58.618 38.462 0.00 0.00 33.26 3.16
3092 3273 3.403038 ACTGCGTCTTTTTAGCATCAGT 58.597 40.909 0.00 0.00 40.35 3.41
3123 3304 2.983229 ACTTGAAGCCTGACTATGCAG 58.017 47.619 0.00 0.00 35.66 4.41
3124 3305 4.760530 ATACTTGAAGCCTGACTATGCA 57.239 40.909 0.00 0.00 0.00 3.96
3159 3340 3.942829 TCAAGCTGTTCTATCCAAGTGG 58.057 45.455 0.00 0.00 0.00 4.00
3175 3356 9.304731 GAGAGAGATCATATATGATGTTCAAGC 57.695 37.037 28.79 14.45 46.84 4.01
3213 3394 8.454106 GCAGAAAATTAGCTAAAATGTGAGAGA 58.546 33.333 10.85 0.00 0.00 3.10
3253 3434 5.335661 CCAGGCCGTATGAAAATATTAAGGC 60.336 44.000 0.00 4.16 41.14 4.35
3288 3469 1.004277 TGGCACAAGTGGGGAGTATTC 59.996 52.381 2.00 0.00 31.92 1.75
3290 3471 2.785743 TGGCACAAGTGGGGAGTAT 58.214 52.632 2.00 0.00 31.92 2.12
3323 3504 1.688735 CAGAGAGGGTGTTGACTGTCA 59.311 52.381 6.36 6.36 30.10 3.58
3414 3596 0.977395 AAGGACAGACCCAGTGCTAC 59.023 55.000 0.00 0.00 36.61 3.58
3482 3665 3.220276 GCTCGCGGCTGAAATTAAC 57.780 52.632 6.13 0.00 38.06 2.01
3533 3716 6.560253 ACAGCTTAAATTACAGACACAAGG 57.440 37.500 0.00 0.00 0.00 3.61
3559 3742 2.074576 CGTTGAGACCGACTACTGAGA 58.925 52.381 0.00 0.00 0.00 3.27
3560 3743 2.074576 TCGTTGAGACCGACTACTGAG 58.925 52.381 0.00 0.00 0.00 3.35
3861 4177 9.857957 ATTCTACTTAACTACTTTCACAGCTAC 57.142 33.333 0.00 0.00 0.00 3.58
3915 4231 8.541133 AAAGAGAGTGTTACTTCTGATTAAGC 57.459 34.615 0.00 0.00 0.00 3.09
4036 4353 4.802039 CCAAAATCGATGGCATCAGAAAAG 59.198 41.667 25.88 9.58 0.00 2.27
4265 4584 9.991906 ATTCTGATTGTCATTTTCACATTTCTT 57.008 25.926 0.00 0.00 0.00 2.52
4398 4717 6.090898 GGTCATAACATCCAATAGCATCGTAC 59.909 42.308 0.00 0.00 0.00 3.67
4566 4885 3.680156 GCCTTTGGCCATCGTTCA 58.320 55.556 6.09 0.00 44.06 3.18
4636 4955 9.034544 GCCAATTCAACATTTTACCTATCAATC 57.965 33.333 0.00 0.00 0.00 2.67
4729 5057 6.817641 TGTTTGCTTAATAAATGGCTCCATTG 59.182 34.615 14.30 3.05 44.86 2.82
4732 5060 5.991933 TGTTTGCTTAATAAATGGCTCCA 57.008 34.783 0.00 0.00 0.00 3.86
4765 5093 6.239008 CCCTGCAAGAAATTCAGTTAGTCAAA 60.239 38.462 0.00 0.00 34.07 2.69
4956 5284 3.249799 CGGTGCAAGAAAACATGTCTACA 59.750 43.478 0.00 0.00 0.00 2.74
4957 5285 3.496884 TCGGTGCAAGAAAACATGTCTAC 59.503 43.478 0.00 0.00 0.00 2.59
5097 5425 4.944048 AGGGAAACAACATACTTTTGCAC 58.056 39.130 0.00 0.00 0.00 4.57
5116 5444 4.639078 AAATGATTGGGTTGGAAAAGGG 57.361 40.909 0.00 0.00 0.00 3.95
5195 5523 5.104527 TGTGCTACTGCCAATCCTAAAGTAT 60.105 40.000 0.00 0.00 38.71 2.12
5283 5782 1.726853 CAGGAGTAAGGTTTGCCTCG 58.273 55.000 0.00 0.00 46.33 4.63
5377 5876 5.208890 ACATTAGAGCCATGTAGGTCACTA 58.791 41.667 4.36 0.00 40.61 2.74
5515 6014 3.549070 GCACGTTGGTATTAAGTAGGACG 59.451 47.826 0.00 0.00 35.59 4.79
5606 6110 2.749076 TGCAATGTAGATCAACAGCACC 59.251 45.455 0.00 0.00 31.70 5.01
5639 6143 7.657354 TGCTATTGTGTGAGTATATGTGAATCC 59.343 37.037 0.00 0.00 0.00 3.01
5708 6212 7.618019 ATTGCCAGATCATAGGTCTTAGTTA 57.382 36.000 0.00 0.00 0.00 2.24
5775 6279 2.353889 CCCACATCATTTTCTCTGAGCG 59.646 50.000 0.00 0.00 0.00 5.03
5803 6307 7.417456 GGGCATATTTAAAGGAAAAGGTGTAGG 60.417 40.741 0.00 0.00 0.00 3.18
5851 6355 4.509616 TGGTGTACATTATGTGCTACCAC 58.490 43.478 22.46 14.50 38.29 4.16
5917 6421 5.045286 ACATGTTCTCAGGCTTTTCCTCTAT 60.045 40.000 0.00 0.00 45.52 1.98
5937 6441 6.999456 TGTAACACAACGATGCTAATACATG 58.001 36.000 0.00 0.00 0.00 3.21
5952 6456 5.764192 GGGTGGTAGTTACAATGTAACACAA 59.236 40.000 30.48 19.60 36.29 3.33
5953 6457 5.163227 TGGGTGGTAGTTACAATGTAACACA 60.163 40.000 30.48 23.64 36.29 3.72
5961 6465 7.701257 ATAAGGTATGGGTGGTAGTTACAAT 57.299 36.000 0.00 0.00 0.00 2.71
5974 6478 8.980481 ATAGAACACTTGAAATAAGGTATGGG 57.020 34.615 0.00 0.00 0.00 4.00
6016 6520 6.061441 TGTGGTGATTGTAACAACTTCTGAT 58.939 36.000 0.00 0.00 0.00 2.90
6028 6532 3.056821 CCTCGAGACTTGTGGTGATTGTA 60.057 47.826 15.71 0.00 0.00 2.41
6062 6573 8.289618 TGTTTGTATTCTTGCATAGAAACACTC 58.710 33.333 13.50 12.73 43.06 3.51
6121 6637 8.568676 TCAAAATACCAATCAGTTTTCCGATA 57.431 30.769 0.00 0.00 0.00 2.92
6138 6654 7.466050 GCAGTAGCTGGTAGTTGATCAAAATAC 60.466 40.741 10.35 15.15 36.91 1.89
6165 6681 2.545946 AGCGCAGAGAGAAAAACAACTC 59.454 45.455 11.47 0.00 0.00 3.01
6213 6729 7.395190 TGTGATATTCATTGAGAAAACCAGG 57.605 36.000 0.00 0.00 40.22 4.45
6241 6757 7.180051 TGTGTTATCCTGGGAAGCAAAATAAAT 59.820 33.333 0.00 0.00 0.00 1.40
6379 6895 4.724399 TCAGGAGGTGATTTTGCTTACAA 58.276 39.130 0.00 0.00 0.00 2.41
6416 6932 6.516718 TGTCCATTTAAAAATTCGCTTTGGA 58.483 32.000 0.00 0.00 0.00 3.53
6482 6998 5.428253 TCTATATTCACCTGAACAAGCCAC 58.572 41.667 0.00 0.00 36.80 5.01
6563 7079 1.081892 CCTCTGCATGGTTGTTCTCG 58.918 55.000 0.00 0.00 0.00 4.04
6568 7084 2.814805 AATAGCCTCTGCATGGTTGT 57.185 45.000 7.58 0.00 41.13 3.32
6597 7113 3.069300 AGGATGACAGATCTTGATCACCG 59.931 47.826 12.44 3.95 0.00 4.94
6612 7128 7.659390 CCAAGATCCACTAATAGAAAGGATGAC 59.341 40.741 14.64 5.61 39.10 3.06
6995 7511 4.156915 CGTTCGTAAACAGAGACACCTAG 58.843 47.826 0.00 0.00 34.93 3.02
7135 7651 2.301296 AGACCAGAAGACATGTCCACAG 59.699 50.000 22.21 12.61 0.00 3.66
7235 7751 4.355437 CCTAGTCGAAGTGTATGCAAGAG 58.645 47.826 0.00 0.00 0.00 2.85
7236 7752 3.428999 GCCTAGTCGAAGTGTATGCAAGA 60.429 47.826 0.00 0.00 0.00 3.02
7237 7753 2.860735 GCCTAGTCGAAGTGTATGCAAG 59.139 50.000 0.00 0.00 0.00 4.01
7250 7766 1.204941 ACTTTACAGCCTGCCTAGTCG 59.795 52.381 0.00 0.00 0.00 4.18
7251 7767 3.336138 AACTTTACAGCCTGCCTAGTC 57.664 47.619 0.00 0.00 0.00 2.59
7425 7941 1.063912 CTGCGTGAAAAGCACACTCAA 59.936 47.619 0.00 0.00 46.42 3.02
7457 7974 9.284968 CGTGATATCTAGTTCCCCAAAAATTAT 57.715 33.333 3.98 0.00 0.00 1.28
7673 8190 2.555325 TCTTCTGCAGTGCAATCTTTGG 59.445 45.455 20.22 5.57 38.41 3.28
8114 8634 7.489113 CCTGAAATTTAGAATGGAAAACATCGG 59.511 37.037 0.00 0.00 39.40 4.18
8174 8694 5.405873 TGCTGACAAAATGCACATTGTTATG 59.594 36.000 17.25 12.24 39.73 1.90
8175 8695 5.539979 TGCTGACAAAATGCACATTGTTAT 58.460 33.333 17.25 0.00 39.73 1.89
8177 8697 3.794717 TGCTGACAAAATGCACATTGTT 58.205 36.364 17.25 4.81 39.73 2.83
8178 8698 3.455990 TGCTGACAAAATGCACATTGT 57.544 38.095 16.43 16.43 42.18 2.71
8181 8701 3.671008 ACATGCTGACAAAATGCACAT 57.329 38.095 0.00 0.00 39.63 3.21
8182 8702 3.124560 CAACATGCTGACAAAATGCACA 58.875 40.909 0.00 0.00 39.63 4.57
8183 8703 2.096614 GCAACATGCTGACAAAATGCAC 60.097 45.455 0.00 0.00 40.96 4.57
8190 8712 1.020437 TCGTTGCAACATGCTGACAA 58.980 45.000 28.01 1.41 45.31 3.18
8195 8717 1.131126 GCATAGTCGTTGCAACATGCT 59.869 47.619 30.51 24.35 45.31 3.79
8268 8790 4.922206 AGCCAAGTAAAAGACCATGATGA 58.078 39.130 0.00 0.00 0.00 2.92
8269 8791 5.393461 GGAAGCCAAGTAAAAGACCATGATG 60.393 44.000 0.00 0.00 0.00 3.07
8270 8792 4.706962 GGAAGCCAAGTAAAAGACCATGAT 59.293 41.667 0.00 0.00 0.00 2.45
8271 8793 4.079253 GGAAGCCAAGTAAAAGACCATGA 58.921 43.478 0.00 0.00 0.00 3.07
8272 8794 4.082125 AGGAAGCCAAGTAAAAGACCATG 58.918 43.478 0.00 0.00 0.00 3.66
8273 8795 4.388577 AGGAAGCCAAGTAAAAGACCAT 57.611 40.909 0.00 0.00 0.00 3.55
8274 8796 3.876309 AGGAAGCCAAGTAAAAGACCA 57.124 42.857 0.00 0.00 0.00 4.02
8276 8798 6.628919 TTACAAGGAAGCCAAGTAAAAGAC 57.371 37.500 0.00 0.00 0.00 3.01
8277 8799 7.001674 TGATTACAAGGAAGCCAAGTAAAAGA 58.998 34.615 0.00 0.00 32.12 2.52
8278 8800 7.214467 TGATTACAAGGAAGCCAAGTAAAAG 57.786 36.000 0.00 0.00 32.12 2.27
8285 8807 7.290061 AGCTATAATGATTACAAGGAAGCCAA 58.710 34.615 0.00 0.00 0.00 4.52
8300 8822 5.290493 ACACCCGAATCAAGCTATAATGA 57.710 39.130 0.00 0.00 0.00 2.57
8301 8823 5.760253 AGAACACCCGAATCAAGCTATAATG 59.240 40.000 0.00 0.00 0.00 1.90
8305 8827 3.452627 AGAGAACACCCGAATCAAGCTAT 59.547 43.478 0.00 0.00 0.00 2.97
8335 8861 2.632512 TGTTTCAAAATCAAGAGGGGCC 59.367 45.455 0.00 0.00 0.00 5.80
8485 9011 1.825191 CATTGGATGCCGGTCCCAG 60.825 63.158 8.56 0.00 37.48 4.45
8532 9058 3.136123 CCAAGCGATGCCCACCAG 61.136 66.667 0.00 0.00 0.00 4.00
8731 9257 2.862140 GCAAACTTCCACATCAAACCCG 60.862 50.000 0.00 0.00 0.00 5.28
8782 9308 8.232913 TCAATACATTTTGTATAAAGGGAGCC 57.767 34.615 0.86 0.00 42.29 4.70
8871 9399 8.143193 TCAATGCAAATATCAAGAACAGTGTTT 58.857 29.630 10.45 0.00 0.00 2.83
8876 9404 8.697846 AACATCAATGCAAATATCAAGAACAG 57.302 30.769 0.00 0.00 0.00 3.16
8895 9423 9.898152 TGTTAGAATGACACCATATAAACATCA 57.102 29.630 0.00 0.00 29.95 3.07
8949 9517 0.035439 TCCAGGCATTTCTCGGTTCC 60.035 55.000 0.00 0.00 0.00 3.62
8954 9522 6.135290 TCAAATTAATCCAGGCATTTCTCG 57.865 37.500 0.00 0.00 0.00 4.04
9062 9856 1.205460 ACCATTACCGAACAGGGCCT 61.205 55.000 0.00 0.00 46.96 5.19
9063 9857 0.746923 GACCATTACCGAACAGGGCC 60.747 60.000 0.00 0.00 46.96 5.80
9064 9858 0.252197 AGACCATTACCGAACAGGGC 59.748 55.000 0.00 0.00 46.96 5.19
9065 9859 2.012051 GCAGACCATTACCGAACAGGG 61.012 57.143 0.00 0.00 46.96 4.45
9067 9861 2.271800 GAGCAGACCATTACCGAACAG 58.728 52.381 0.00 0.00 0.00 3.16
9068 9862 1.066430 GGAGCAGACCATTACCGAACA 60.066 52.381 0.00 0.00 0.00 3.18
9069 9863 1.653151 GGAGCAGACCATTACCGAAC 58.347 55.000 0.00 0.00 0.00 3.95
9070 9864 0.539986 GGGAGCAGACCATTACCGAA 59.460 55.000 0.00 0.00 0.00 4.30
9071 9865 0.616395 TGGGAGCAGACCATTACCGA 60.616 55.000 0.00 0.00 31.83 4.69
9072 9866 0.179073 CTGGGAGCAGACCATTACCG 60.179 60.000 0.00 0.00 37.38 4.02
9073 9867 1.204146 TCTGGGAGCAGACCATTACC 58.796 55.000 0.00 0.00 37.38 2.85
9074 9868 3.135530 AGATTCTGGGAGCAGACCATTAC 59.864 47.826 0.00 0.00 37.38 1.89
9075 9869 3.135348 CAGATTCTGGGAGCAGACCATTA 59.865 47.826 5.73 0.00 37.38 1.90
9076 9870 2.092538 CAGATTCTGGGAGCAGACCATT 60.093 50.000 5.73 0.00 37.38 3.16
9077 9871 1.489649 CAGATTCTGGGAGCAGACCAT 59.510 52.381 5.73 0.00 37.38 3.55
9078 9872 0.907486 CAGATTCTGGGAGCAGACCA 59.093 55.000 5.73 0.00 36.38 4.02
9079 9873 0.463474 GCAGATTCTGGGAGCAGACC 60.463 60.000 15.28 0.00 31.21 3.85
9080 9874 0.809241 CGCAGATTCTGGGAGCAGAC 60.809 60.000 22.51 0.00 45.41 3.51
9081 9875 1.519246 CGCAGATTCTGGGAGCAGA 59.481 57.895 22.51 0.00 45.41 4.26
9082 9876 1.523258 CCGCAGATTCTGGGAGCAG 60.523 63.158 27.07 10.42 45.41 4.24
9083 9877 1.964608 CTCCGCAGATTCTGGGAGCA 61.965 60.000 27.07 12.56 45.41 4.26
9084 9878 1.227497 CTCCGCAGATTCTGGGAGC 60.227 63.158 27.07 7.82 45.41 4.70
9085 9879 0.179089 CACTCCGCAGATTCTGGGAG 60.179 60.000 30.17 30.17 45.41 4.30
9086 9880 1.617018 CCACTCCGCAGATTCTGGGA 61.617 60.000 27.07 21.86 45.41 4.37
9087 9881 1.153289 CCACTCCGCAGATTCTGGG 60.153 63.158 20.63 20.63 42.81 4.45
9088 9882 1.153289 CCCACTCCGCAGATTCTGG 60.153 63.158 15.28 5.63 31.21 3.86
9089 9883 0.036010 AACCCACTCCGCAGATTCTG 60.036 55.000 9.40 9.40 34.12 3.02
9090 9884 1.568504 TAACCCACTCCGCAGATTCT 58.431 50.000 0.00 0.00 0.00 2.40
9091 9885 2.396590 TTAACCCACTCCGCAGATTC 57.603 50.000 0.00 0.00 0.00 2.52
9092 9886 2.643551 CATTAACCCACTCCGCAGATT 58.356 47.619 0.00 0.00 0.00 2.40
9093 9887 1.134098 CCATTAACCCACTCCGCAGAT 60.134 52.381 0.00 0.00 0.00 2.90
9094 9888 0.251916 CCATTAACCCACTCCGCAGA 59.748 55.000 0.00 0.00 0.00 4.26
9095 9889 1.376609 GCCATTAACCCACTCCGCAG 61.377 60.000 0.00 0.00 0.00 5.18
9096 9890 1.377987 GCCATTAACCCACTCCGCA 60.378 57.895 0.00 0.00 0.00 5.69
9097 9891 0.963355 TTGCCATTAACCCACTCCGC 60.963 55.000 0.00 0.00 0.00 5.54
9098 9892 0.808755 GTTGCCATTAACCCACTCCG 59.191 55.000 0.00 0.00 0.00 4.63
9099 9893 2.092323 GAGTTGCCATTAACCCACTCC 58.908 52.381 0.00 0.00 0.00 3.85
9100 9894 2.092323 GGAGTTGCCATTAACCCACTC 58.908 52.381 0.00 0.00 36.34 3.51
9101 9895 1.427368 TGGAGTTGCCATTAACCCACT 59.573 47.619 0.00 0.00 43.33 4.00
9102 9896 1.917872 TGGAGTTGCCATTAACCCAC 58.082 50.000 0.00 0.00 43.33 4.61
9111 9905 3.964031 AGTTTAAAATGGTGGAGTTGCCA 59.036 39.130 0.00 0.00 46.96 4.92
9112 9906 4.600692 AGTTTAAAATGGTGGAGTTGCC 57.399 40.909 0.00 0.00 37.10 4.52
9113 9907 6.079424 TGTAGTTTAAAATGGTGGAGTTGC 57.921 37.500 0.00 0.00 0.00 4.17
9114 9908 6.016276 AGCTGTAGTTTAAAATGGTGGAGTTG 60.016 38.462 0.00 0.00 0.00 3.16
9115 9909 6.068670 AGCTGTAGTTTAAAATGGTGGAGTT 58.931 36.000 0.00 0.00 0.00 3.01
9116 9910 5.631119 AGCTGTAGTTTAAAATGGTGGAGT 58.369 37.500 0.00 0.00 0.00 3.85
9117 9911 5.123979 GGAGCTGTAGTTTAAAATGGTGGAG 59.876 44.000 0.00 0.00 0.00 3.86
9118 9912 5.007682 GGAGCTGTAGTTTAAAATGGTGGA 58.992 41.667 0.00 0.00 0.00 4.02
9119 9913 4.142687 CGGAGCTGTAGTTTAAAATGGTGG 60.143 45.833 0.00 0.00 0.00 4.61
9120 9914 4.969816 CGGAGCTGTAGTTTAAAATGGTG 58.030 43.478 0.00 0.00 0.00 4.17
9138 9932 4.821589 GGAGCGGAGTTGGCGGAG 62.822 72.222 0.00 0.00 35.00 4.63
9150 9944 3.649277 CTCCACAACTCCCGGAGCG 62.649 68.421 14.86 8.55 39.95 5.03
9151 9945 2.266055 CTCCACAACTCCCGGAGC 59.734 66.667 14.86 0.00 39.95 4.70
9153 9947 3.691342 CGCTCCACAACTCCCGGA 61.691 66.667 0.73 0.00 0.00 5.14
9154 9948 3.234630 TTCGCTCCACAACTCCCGG 62.235 63.158 0.00 0.00 0.00 5.73
9155 9949 1.738099 CTTCGCTCCACAACTCCCG 60.738 63.158 0.00 0.00 0.00 5.14
9156 9950 2.035442 GCTTCGCTCCACAACTCCC 61.035 63.158 0.00 0.00 0.00 4.30
9157 9951 2.383527 CGCTTCGCTCCACAACTCC 61.384 63.158 0.00 0.00 0.00 3.85
9158 9952 1.222115 AACGCTTCGCTCCACAACTC 61.222 55.000 0.00 0.00 0.00 3.01
9159 9953 1.227556 AACGCTTCGCTCCACAACT 60.228 52.632 0.00 0.00 0.00 3.16
9160 9954 1.082756 CAACGCTTCGCTCCACAAC 60.083 57.895 0.00 0.00 0.00 3.32
9161 9955 2.892334 GCAACGCTTCGCTCCACAA 61.892 57.895 0.00 0.00 0.00 3.33
9162 9956 3.345808 GCAACGCTTCGCTCCACA 61.346 61.111 0.00 0.00 0.00 4.17
9163 9957 4.090057 GGCAACGCTTCGCTCCAC 62.090 66.667 0.00 0.00 0.00 4.02
9175 9969 1.302993 TTAGGGGCTGTTCGGCAAC 60.303 57.895 5.97 0.00 40.61 4.17
9176 9970 1.002624 CTTAGGGGCTGTTCGGCAA 60.003 57.895 5.97 0.00 40.61 4.52
9177 9971 0.905809 TACTTAGGGGCTGTTCGGCA 60.906 55.000 5.97 0.00 40.61 5.69
9178 9972 0.468648 ATACTTAGGGGCTGTTCGGC 59.531 55.000 0.00 0.00 37.49 5.54
9179 9973 2.963782 AGTATACTTAGGGGCTGTTCGG 59.036 50.000 0.00 0.00 0.00 4.30
9180 9974 3.635373 TGAGTATACTTAGGGGCTGTTCG 59.365 47.826 6.88 0.00 0.00 3.95
9181 9975 5.810080 ATGAGTATACTTAGGGGCTGTTC 57.190 43.478 6.88 0.00 0.00 3.18
9182 9976 6.042897 GGTTATGAGTATACTTAGGGGCTGTT 59.957 42.308 6.88 0.00 0.00 3.16
9183 9977 5.543020 GGTTATGAGTATACTTAGGGGCTGT 59.457 44.000 6.88 0.00 0.00 4.40
9184 9978 5.542635 TGGTTATGAGTATACTTAGGGGCTG 59.457 44.000 6.88 0.00 0.00 4.85
9185 9979 5.543020 GTGGTTATGAGTATACTTAGGGGCT 59.457 44.000 6.88 0.00 0.00 5.19
9186 9980 5.306160 TGTGGTTATGAGTATACTTAGGGGC 59.694 44.000 6.88 0.00 0.00 5.80
9187 9981 6.553852 AGTGTGGTTATGAGTATACTTAGGGG 59.446 42.308 6.88 0.00 0.00 4.79
9188 9982 7.598759 AGTGTGGTTATGAGTATACTTAGGG 57.401 40.000 6.88 0.00 0.00 3.53
9192 9986 9.251440 TCACTTAGTGTGGTTATGAGTATACTT 57.749 33.333 12.41 0.00 46.20 2.24
9214 10008 8.303780 TCTCTGATATCATTCTTTCACTCACT 57.696 34.615 5.72 0.00 0.00 3.41
9215 10009 9.195411 GATCTCTGATATCATTCTTTCACTCAC 57.805 37.037 5.72 0.00 0.00 3.51
9216 10010 8.921205 TGATCTCTGATATCATTCTTTCACTCA 58.079 33.333 5.72 0.00 0.00 3.41
9226 10024 7.932491 CCAGTTTGTCTGATCTCTGATATCATT 59.068 37.037 5.72 0.00 46.27 2.57
9227 10025 7.070946 ACCAGTTTGTCTGATCTCTGATATCAT 59.929 37.037 5.72 0.00 46.27 2.45
9243 10041 4.084013 CCTGATCGTGTTTACCAGTTTGTC 60.084 45.833 0.00 0.00 0.00 3.18
9272 10070 4.142924 CGCTTTTTCTTTTGTGGCAGTTTT 60.143 37.500 0.00 0.00 0.00 2.43
9287 10085 7.290857 TGAGTGTTATCAGTATCGCTTTTTC 57.709 36.000 0.00 0.00 0.00 2.29
9444 10246 2.410322 ATCAAGCGGCCCAGTTGTCA 62.410 55.000 0.00 0.00 0.00 3.58
9448 10250 3.064324 GCATCAAGCGGCCCAGTT 61.064 61.111 0.00 0.00 0.00 3.16
9492 10294 4.021544 GTGGCCTACATTTTGGACATCAAA 60.022 41.667 3.32 0.00 44.07 2.69
9665 10467 1.071699 GGTGGTTGGACTGCTGAGTTA 59.928 52.381 0.00 0.00 30.16 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.