Multiple sequence alignment - TraesCS7A01G128000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G128000 chr7A 100.000 2936 0 0 1 2936 82127359 82130294 0.000000e+00 5422
1 TraesCS7A01G128000 chr7A 96.247 453 15 2 2484 2935 510754068 510753617 0.000000e+00 741
2 TraesCS7A01G128000 chr7A 89.222 334 27 6 2157 2489 80317072 80316747 2.720000e-110 409
3 TraesCS7A01G128000 chr7D 93.447 1755 75 17 633 2368 79319856 79321589 0.000000e+00 2567
4 TraesCS7A01G128000 chr7D 94.222 1073 32 13 633 1690 79255468 79256525 0.000000e+00 1611
5 TraesCS7A01G128000 chr7D 85.418 1303 144 24 816 2097 79253374 79254651 0.000000e+00 1312
6 TraesCS7A01G128000 chr7D 87.631 1148 81 22 633 1738 79174592 79175720 0.000000e+00 1277
7 TraesCS7A01G128000 chr7D 85.599 1243 137 22 877 2097 79317834 79319056 0.000000e+00 1266
8 TraesCS7A01G128000 chr7D 84.674 1305 150 27 816 2097 79295137 79296414 0.000000e+00 1256
9 TraesCS7A01G128000 chr7D 93.013 687 38 5 1687 2368 79256671 79257352 0.000000e+00 994
10 TraesCS7A01G128000 chr7D 96.239 452 16 1 2485 2935 530371196 530371647 0.000000e+00 739
11 TraesCS7A01G128000 chr7D 97.630 422 10 0 1079 1500 79298653 79299074 0.000000e+00 725
12 TraesCS7A01G128000 chr7D 94.033 419 17 4 1739 2154 79176126 79176539 1.920000e-176 628
13 TraesCS7A01G128000 chr7D 90.948 464 25 9 1 455 79254809 79255264 2.500000e-170 608
14 TraesCS7A01G128000 chr7D 90.733 464 24 9 1 455 79296571 79297024 4.190000e-168 601
15 TraesCS7A01G128000 chr7D 89.765 469 17 10 633 1086 79297227 79297679 3.280000e-159 571
16 TraesCS7A01G128000 chr7D 88.528 462 24 11 1 455 79319213 79319652 1.550000e-147 532
17 TraesCS7A01G128000 chr7D 84.016 513 40 14 1 503 79174111 79174591 3.450000e-124 455
18 TraesCS7A01G128000 chr7D 89.222 334 27 4 2157 2489 76400107 76399782 2.720000e-110 409
19 TraesCS7A01G128000 chr7D 88.218 331 28 6 2157 2484 79177207 79177529 4.590000e-103 385
20 TraesCS7A01G128000 chr7D 85.405 370 25 11 10 373 630909643 630909297 1.000000e-94 357
21 TraesCS7A01G128000 chr7D 86.859 312 18 8 1 303 78321956 78321659 7.850000e-86 327
22 TraesCS7A01G128000 chr7D 98.319 119 2 0 2367 2485 79358383 79358501 2.970000e-50 209
23 TraesCS7A01G128000 chr7B 88.897 1423 98 24 760 2160 26285949 26287333 0.000000e+00 1698
24 TraesCS7A01G128000 chr7B 86.423 1370 129 22 816 2160 26644891 26646228 0.000000e+00 1447
25 TraesCS7A01G128000 chr7B 95.441 329 11 1 2157 2485 26650070 26650394 3.350000e-144 521
26 TraesCS7A01G128000 chr7B 83.508 382 30 10 1 378 26284492 26284844 2.820000e-85 326
27 TraesCS7A01G128000 chr7B 91.473 129 10 1 507 634 266186044 266185916 3.010000e-40 176
28 TraesCS7A01G128000 chr3D 96.452 451 15 1 2486 2935 360375551 360375101 0.000000e+00 743
29 TraesCS7A01G128000 chr3D 96.018 452 17 1 2485 2935 94763597 94764048 0.000000e+00 734
30 TraesCS7A01G128000 chr3D 96.018 452 15 3 2485 2935 166994008 166993559 0.000000e+00 732
31 TraesCS7A01G128000 chr3A 96.247 453 15 2 2484 2935 52989604 52990055 0.000000e+00 741
32 TraesCS7A01G128000 chr3A 89.209 139 12 3 506 641 348834443 348834581 1.400000e-38 171
33 TraesCS7A01G128000 chr5A 96.239 452 14 2 2485 2935 11150720 11151169 0.000000e+00 737
34 TraesCS7A01G128000 chr5A 96.018 452 15 2 2485 2935 11169564 11170013 0.000000e+00 732
35 TraesCS7A01G128000 chr5A 90.076 131 12 1 507 636 687681055 687680925 5.030000e-38 169
36 TraesCS7A01G128000 chr2A 96.026 453 16 2 2484 2935 95212303 95212754 0.000000e+00 736
37 TraesCS7A01G128000 chr2A 89.051 137 11 4 507 641 375325094 375325228 1.810000e-37 167
38 TraesCS7A01G128000 chr3B 94.880 332 15 1 2157 2488 703925040 703924711 4.340000e-143 518
39 TraesCS7A01G128000 chr3B 84.324 370 26 16 13 373 59462207 59461861 1.690000e-87 333
40 TraesCS7A01G128000 chr2D 86.450 369 23 10 10 373 31857155 31857501 2.140000e-101 379
41 TraesCS7A01G128000 chr1D 85.286 367 25 14 14 373 487348601 487348257 4.660000e-93 351
42 TraesCS7A01G128000 chr5B 84.946 372 26 13 10 373 635602656 635602307 1.670000e-92 350
43 TraesCS7A01G128000 chr5D 88.737 293 21 10 213 500 515110929 515111214 6.020000e-92 348
44 TraesCS7A01G128000 chr4D 89.362 141 13 2 501 639 394190833 394190973 3.010000e-40 176
45 TraesCS7A01G128000 chr4D 90.000 130 12 1 509 637 427981424 427981295 1.810000e-37 167
46 TraesCS7A01G128000 chr6D 90.698 129 11 1 506 633 418599072 418599200 1.400000e-38 171
47 TraesCS7A01G128000 chr6B 90.000 130 12 1 506 634 492192458 492192587 1.810000e-37 167
48 TraesCS7A01G128000 chr1A 90.000 130 12 1 509 637 144118865 144118736 1.810000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G128000 chr7A 82127359 82130294 2935 False 5422.00 5422 100.000000 1 2936 1 chr7A.!!$F1 2935
1 TraesCS7A01G128000 chr7D 79317834 79321589 3755 False 1455.00 2567 89.191333 1 2368 3 chr7D.!!$F6 2367
2 TraesCS7A01G128000 chr7D 79253374 79257352 3978 False 1131.25 1611 90.900250 1 2368 4 chr7D.!!$F4 2367
3 TraesCS7A01G128000 chr7D 79295137 79299074 3937 False 788.25 1256 90.700500 1 2097 4 chr7D.!!$F5 2096
4 TraesCS7A01G128000 chr7D 79174111 79177529 3418 False 686.25 1277 88.474500 1 2484 4 chr7D.!!$F3 2483
5 TraesCS7A01G128000 chr7B 26284492 26287333 2841 False 1012.00 1698 86.202500 1 2160 2 chr7B.!!$F1 2159
6 TraesCS7A01G128000 chr7B 26644891 26650394 5503 False 984.00 1447 90.932000 816 2485 2 chr7B.!!$F2 1669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
963 3393 0.322636 ATCTTTCTGCTGCTGCTGCT 60.323 50.0 27.67 7.14 40.48 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2901 10760 0.033228 GATGGAGAGGATGCGGTGAG 59.967 60.0 0.0 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 1521 6.423905 GTGCTTCAACTGTTCACTCTACATAA 59.576 38.462 0.00 0.00 0.00 1.90
122 1558 8.612619 ACTAAAATTCATATGTTCCATGTCGTC 58.387 33.333 1.90 0.00 0.00 4.20
157 1598 7.531857 TGTGCATTCTATTTTCCTGGTAAAA 57.468 32.000 2.50 4.86 33.15 1.52
162 1603 9.651913 GCATTCTATTTTCCTGGTAAAATTTGA 57.348 29.630 16.49 13.47 39.27 2.69
183 1624 8.620116 TTTGACATGTCATCTTTCTGAACATA 57.380 30.769 28.32 6.20 39.64 2.29
186 1627 9.234827 TGACATGTCATCTTTCTGAACATAAAT 57.765 29.630 24.56 0.00 34.14 1.40
256 1704 8.921353 ATTTGCTATGCTTTCTTAGAGATCAT 57.079 30.769 0.00 0.00 0.00 2.45
269 1717 9.725019 TTCTTAGAGATCATTTTTGCTGTAGAA 57.275 29.630 0.00 0.00 0.00 2.10
419 1877 2.031157 ACGTGGGCATTTTTCTTCTTCG 60.031 45.455 0.00 0.00 0.00 3.79
447 1905 3.260632 TCCTTTTTATGCCTTTTCAGCCC 59.739 43.478 0.00 0.00 0.00 5.19
455 1913 4.972751 TGCCTTTTCAGCCCTTTTAATT 57.027 36.364 0.00 0.00 0.00 1.40
501 2897 6.432403 TCAAATATGGGCCTTCTTTTTGTT 57.568 33.333 4.53 0.00 0.00 2.83
502 2898 7.546250 TCAAATATGGGCCTTCTTTTTGTTA 57.454 32.000 4.53 0.00 0.00 2.41
504 2900 6.926630 AATATGGGCCTTCTTTTTGTTACA 57.073 33.333 4.53 0.00 0.00 2.41
506 2902 8.602472 AATATGGGCCTTCTTTTTGTTACATA 57.398 30.769 4.53 0.00 0.00 2.29
511 2907 6.657966 GGGCCTTCTTTTTGTTACATACTACT 59.342 38.462 0.84 0.00 0.00 2.57
514 2910 7.606839 GCCTTCTTTTTGTTACATACTACTCCT 59.393 37.037 0.00 0.00 0.00 3.69
515 2911 9.503399 CCTTCTTTTTGTTACATACTACTCCTT 57.497 33.333 0.00 0.00 0.00 3.36
517 2913 9.498176 TTCTTTTTGTTACATACTACTCCTTCC 57.502 33.333 0.00 0.00 0.00 3.46
518 2914 7.816031 TCTTTTTGTTACATACTACTCCTTCCG 59.184 37.037 0.00 0.00 0.00 4.30
521 2917 5.503927 TGTTACATACTACTCCTTCCGTCT 58.496 41.667 0.00 0.00 0.00 4.18
524 2920 4.597004 ACATACTACTCCTTCCGTCTCAA 58.403 43.478 0.00 0.00 0.00 3.02
526 2922 5.479375 ACATACTACTCCTTCCGTCTCAAAA 59.521 40.000 0.00 0.00 0.00 2.44
527 2923 6.154706 ACATACTACTCCTTCCGTCTCAAAAT 59.845 38.462 0.00 0.00 0.00 1.82
528 2924 5.485209 ACTACTCCTTCCGTCTCAAAATT 57.515 39.130 0.00 0.00 0.00 1.82
529 2925 5.866207 ACTACTCCTTCCGTCTCAAAATTT 58.134 37.500 0.00 0.00 0.00 1.82
530 2926 6.296803 ACTACTCCTTCCGTCTCAAAATTTT 58.703 36.000 0.00 0.00 0.00 1.82
531 2927 6.771267 ACTACTCCTTCCGTCTCAAAATTTTT 59.229 34.615 0.00 0.00 0.00 1.94
532 2928 5.831997 ACTCCTTCCGTCTCAAAATTTTTG 58.168 37.500 14.41 14.41 0.00 2.44
534 2930 5.827666 TCCTTCCGTCTCAAAATTTTTGTC 58.172 37.500 18.69 11.09 0.00 3.18
537 2933 7.283580 TCCTTCCGTCTCAAAATTTTTGTCTTA 59.716 33.333 18.69 2.16 0.00 2.10
538 2934 7.378728 CCTTCCGTCTCAAAATTTTTGTCTTAC 59.621 37.037 18.69 12.36 0.00 2.34
539 2935 7.323049 TCCGTCTCAAAATTTTTGTCTTACA 57.677 32.000 18.69 1.22 0.00 2.41
541 2937 8.410141 TCCGTCTCAAAATTTTTGTCTTACATT 58.590 29.630 18.69 0.00 0.00 2.71
542 2938 9.672086 CCGTCTCAAAATTTTTGTCTTACATTA 57.328 29.630 18.69 0.00 0.00 1.90
559 2955 9.063615 TCTTACATTAGTCTAGATACGAATGCA 57.936 33.333 13.73 0.00 42.68 3.96
561 2957 7.278461 ACATTAGTCTAGATACGAATGCACT 57.722 36.000 13.73 0.00 42.68 4.40
575 2971 9.858247 ATACGAATGCACTAATATTAAAACGTG 57.142 29.630 0.00 7.78 0.00 4.49
576 2972 7.966111 ACGAATGCACTAATATTAAAACGTGA 58.034 30.769 13.82 3.49 0.00 4.35
577 2973 7.901377 ACGAATGCACTAATATTAAAACGTGAC 59.099 33.333 13.82 7.77 0.00 3.67
578 2974 8.114290 CGAATGCACTAATATTAAAACGTGACT 58.886 33.333 13.82 1.38 0.00 3.41
580 2976 9.554724 AATGCACTAATATTAAAACGTGACTTG 57.445 29.630 13.82 0.00 0.00 3.16
582 2978 8.941977 TGCACTAATATTAAAACGTGACTTGAT 58.058 29.630 13.82 0.00 0.00 2.57
590 2986 5.934935 AAAACGTGACTTGATAAATCCGT 57.065 34.783 0.00 0.00 0.00 4.69
591 2987 8.531622 TTAAAACGTGACTTGATAAATCCGTA 57.468 30.769 0.00 0.00 0.00 4.02
592 2988 7.605410 AAAACGTGACTTGATAAATCCGTAT 57.395 32.000 0.00 0.00 0.00 3.06
593 2989 6.823678 AACGTGACTTGATAAATCCGTATC 57.176 37.500 0.00 0.00 0.00 2.24
594 2990 6.145338 ACGTGACTTGATAAATCCGTATCT 57.855 37.500 0.00 0.00 32.58 1.98
595 2991 6.207213 ACGTGACTTGATAAATCCGTATCTC 58.793 40.000 0.00 0.00 32.58 2.75
596 2992 5.339875 CGTGACTTGATAAATCCGTATCTCG 59.660 44.000 0.00 0.00 39.52 4.04
597 2993 6.436261 GTGACTTGATAAATCCGTATCTCGA 58.564 40.000 0.00 0.00 42.86 4.04
598 2994 6.360148 GTGACTTGATAAATCCGTATCTCGAC 59.640 42.308 0.00 0.00 42.86 4.20
599 2995 6.038936 TGACTTGATAAATCCGTATCTCGACA 59.961 38.462 0.00 0.00 42.86 4.35
600 2996 6.802608 ACTTGATAAATCCGTATCTCGACAA 58.197 36.000 0.00 0.00 42.86 3.18
601 2997 7.262772 ACTTGATAAATCCGTATCTCGACAAA 58.737 34.615 0.00 0.00 42.86 2.83
602 2998 7.926555 ACTTGATAAATCCGTATCTCGACAAAT 59.073 33.333 0.00 0.00 42.86 2.32
603 2999 8.657074 TTGATAAATCCGTATCTCGACAAATT 57.343 30.769 0.00 0.00 42.86 1.82
604 3000 8.657074 TGATAAATCCGTATCTCGACAAATTT 57.343 30.769 0.00 0.00 42.86 1.82
605 3001 9.752961 TGATAAATCCGTATCTCGACAAATTTA 57.247 29.630 0.00 0.00 42.86 1.40
608 3004 8.712285 AAATCCGTATCTCGACAAATTTAAGA 57.288 30.769 0.00 0.00 42.86 2.10
609 3005 7.695869 ATCCGTATCTCGACAAATTTAAGAC 57.304 36.000 0.00 0.00 42.86 3.01
610 3006 6.623486 TCCGTATCTCGACAAATTTAAGACA 58.377 36.000 0.00 0.00 42.86 3.41
611 3007 7.092079 TCCGTATCTCGACAAATTTAAGACAA 58.908 34.615 0.00 0.00 42.86 3.18
612 3008 7.274904 TCCGTATCTCGACAAATTTAAGACAAG 59.725 37.037 0.00 0.00 42.86 3.16
613 3009 7.274904 CCGTATCTCGACAAATTTAAGACAAGA 59.725 37.037 0.00 0.00 42.86 3.02
614 3010 8.644619 CGTATCTCGACAAATTTAAGACAAGAA 58.355 33.333 0.00 0.00 42.86 2.52
620 3016 9.243637 TCGACAAATTTAAGACAAGAATTTTGG 57.756 29.630 0.00 0.00 33.39 3.28
621 3017 8.487176 CGACAAATTTAAGACAAGAATTTTGGG 58.513 33.333 0.00 0.00 33.39 4.12
622 3018 9.541143 GACAAATTTAAGACAAGAATTTTGGGA 57.459 29.630 0.00 0.00 33.39 4.37
623 3019 9.325198 ACAAATTTAAGACAAGAATTTTGGGAC 57.675 29.630 0.00 0.00 33.39 4.46
624 3020 9.323985 CAAATTTAAGACAAGAATTTTGGGACA 57.676 29.630 0.00 0.00 32.35 4.02
625 3021 9.546428 AAATTTAAGACAAGAATTTTGGGACAG 57.454 29.630 0.00 0.00 42.39 3.51
626 3022 7.889873 TTTAAGACAAGAATTTTGGGACAGA 57.110 32.000 5.68 0.00 42.39 3.41
627 3023 7.510549 TTAAGACAAGAATTTTGGGACAGAG 57.489 36.000 5.68 0.00 42.39 3.35
628 3024 4.401925 AGACAAGAATTTTGGGACAGAGG 58.598 43.478 5.68 0.00 42.39 3.69
629 3025 3.500343 ACAAGAATTTTGGGACAGAGGG 58.500 45.455 5.68 0.00 42.39 4.30
630 3026 3.140144 ACAAGAATTTTGGGACAGAGGGA 59.860 43.478 5.68 0.00 42.39 4.20
631 3027 3.728385 AGAATTTTGGGACAGAGGGAG 57.272 47.619 0.00 0.00 42.39 4.30
636 3032 6.447084 AGAATTTTGGGACAGAGGGAGTATTA 59.553 38.462 0.00 0.00 42.39 0.98
666 3062 4.099573 TCCGAATAGGGTTCTGTCTTCATC 59.900 45.833 0.00 0.00 41.52 2.92
667 3063 4.141937 CCGAATAGGGTTCTGTCTTCATCA 60.142 45.833 0.00 0.00 35.97 3.07
687 3090 7.348815 TCATCACATAGTTGGAATTGGAATCT 58.651 34.615 0.00 0.00 0.00 2.40
694 3097 2.726821 TGGAATTGGAATCTGGAGCAC 58.273 47.619 0.00 0.00 0.00 4.40
741 3152 4.232091 ACCGTCTTATAATCATGGAGGGT 58.768 43.478 9.18 9.18 39.38 4.34
744 3155 6.062095 CCGTCTTATAATCATGGAGGGTTTT 58.938 40.000 0.00 0.00 0.00 2.43
745 3156 6.546034 CCGTCTTATAATCATGGAGGGTTTTT 59.454 38.462 0.00 0.00 0.00 1.94
746 3157 7.255139 CCGTCTTATAATCATGGAGGGTTTTTC 60.255 40.741 0.00 0.00 0.00 2.29
747 3158 7.255139 CGTCTTATAATCATGGAGGGTTTTTCC 60.255 40.741 0.00 0.00 35.20 3.13
748 3159 7.780271 GTCTTATAATCATGGAGGGTTTTTCCT 59.220 37.037 0.00 0.00 40.43 3.36
749 3160 9.009675 TCTTATAATCATGGAGGGTTTTTCCTA 57.990 33.333 0.00 0.00 37.25 2.94
750 3161 9.289782 CTTATAATCATGGAGGGTTTTTCCTAG 57.710 37.037 0.00 0.00 37.25 3.02
751 3162 4.526438 ATCATGGAGGGTTTTTCCTAGG 57.474 45.455 0.82 0.82 37.25 3.02
752 3163 3.265489 TCATGGAGGGTTTTTCCTAGGT 58.735 45.455 9.08 0.00 37.25 3.08
753 3164 3.265995 TCATGGAGGGTTTTTCCTAGGTC 59.734 47.826 9.08 0.00 37.25 3.85
754 3165 2.708759 TGGAGGGTTTTTCCTAGGTCA 58.291 47.619 9.08 0.00 37.25 4.02
755 3166 3.057586 TGGAGGGTTTTTCCTAGGTCAA 58.942 45.455 9.08 0.00 37.25 3.18
756 3167 3.181437 TGGAGGGTTTTTCCTAGGTCAAC 60.181 47.826 9.08 9.89 37.25 3.18
757 3168 3.074094 GGAGGGTTTTTCCTAGGTCAACT 59.926 47.826 9.08 0.00 37.25 3.16
758 3169 4.325119 GAGGGTTTTTCCTAGGTCAACTC 58.675 47.826 9.08 10.06 37.25 3.01
808 3227 0.949105 CGCTACTGCCGTTGTTCCTT 60.949 55.000 0.00 0.00 35.36 3.36
827 3246 2.046507 AGGAGACGTACGAGCCGT 60.047 61.111 24.41 8.44 44.35 5.68
898 3325 0.530650 TATGCTGCGCTGCTACTTCC 60.531 55.000 34.26 9.50 0.00 3.46
963 3393 0.322636 ATCTTTCTGCTGCTGCTGCT 60.323 50.000 27.67 7.14 40.48 4.24
964 3394 1.210413 CTTTCTGCTGCTGCTGCTG 59.790 57.895 27.67 26.32 40.48 4.41
1183 4618 2.128771 TTCTGAGGGTGCCAATAAGC 57.871 50.000 0.00 0.00 0.00 3.09
1327 4769 4.293415 CAAATTTATCAGCAAGGCGGATC 58.707 43.478 7.11 0.00 41.95 3.36
1408 4851 1.148759 GAAGGAGATCCGTTGCGAGC 61.149 60.000 0.00 0.00 42.08 5.03
1690 5137 4.968812 TTCATATACACGGACGACTCAA 57.031 40.909 0.00 0.00 0.00 3.02
1691 5138 5.509716 TTCATATACACGGACGACTCAAT 57.490 39.130 0.00 0.00 0.00 2.57
1696 5292 1.078759 CACGGACGACTCAATGCCTC 61.079 60.000 0.00 0.00 0.00 4.70
1714 5310 1.546029 CTCAGATCACCCGTGAAGACA 59.454 52.381 0.91 0.00 43.58 3.41
1859 5860 1.806542 AGCTGAACAACATAGTTGCCG 59.193 47.619 9.60 0.00 0.00 5.69
1935 5936 2.666272 TGGTGGCAAGTGATGGTTAA 57.334 45.000 0.00 0.00 0.00 2.01
1962 5963 1.597854 CAAGAGCAGTTGCCCGTCA 60.598 57.895 0.00 0.00 43.38 4.35
1965 5966 2.029844 GAGCAGTTGCCCGTCAGTC 61.030 63.158 0.00 0.00 43.38 3.51
1966 5967 2.280797 GCAGTTGCCCGTCAGTCA 60.281 61.111 0.00 0.00 34.31 3.41
2001 6002 1.687123 GCTAGATTCCTACCCGCTGAA 59.313 52.381 0.00 0.00 0.00 3.02
2095 6100 9.498176 GGTAATTCAGTTTTTACTAGTCCTTGA 57.502 33.333 0.00 0.00 0.00 3.02
2098 6103 7.435068 TTCAGTTTTTACTAGTCCTTGATGC 57.565 36.000 0.00 0.00 0.00 3.91
2208 10067 9.151471 TGAGCAATAGAATGTTAAACAGTAGTC 57.849 33.333 0.00 0.00 0.00 2.59
2319 10178 6.798427 AGAATTCAGATAGTGGCAGTTCTA 57.202 37.500 8.44 0.00 0.00 2.10
2368 10227 3.346315 TGTACACCTTTGATCATGCCAG 58.654 45.455 0.00 0.00 0.00 4.85
2369 10228 1.843368 ACACCTTTGATCATGCCAGG 58.157 50.000 0.00 2.77 0.00 4.45
2371 10230 0.706433 ACCTTTGATCATGCCAGGGT 59.294 50.000 12.84 4.83 0.00 4.34
2447 10306 6.098679 TGCTATTGCCAAAATAATGTCACAC 58.901 36.000 0.00 0.00 38.71 3.82
2485 10344 1.002134 AGAAAGGATGGTGTGGGCG 60.002 57.895 0.00 0.00 0.00 6.13
2486 10345 1.303317 GAAAGGATGGTGTGGGCGT 60.303 57.895 0.00 0.00 0.00 5.68
2487 10346 0.893727 GAAAGGATGGTGTGGGCGTT 60.894 55.000 0.00 0.00 0.00 4.84
2488 10347 0.469144 AAAGGATGGTGTGGGCGTTT 60.469 50.000 0.00 0.00 0.00 3.60
2489 10348 0.893727 AAGGATGGTGTGGGCGTTTC 60.894 55.000 0.00 0.00 0.00 2.78
2490 10349 1.303317 GGATGGTGTGGGCGTTTCT 60.303 57.895 0.00 0.00 0.00 2.52
2491 10350 1.586154 GGATGGTGTGGGCGTTTCTG 61.586 60.000 0.00 0.00 0.00 3.02
2492 10351 2.200170 GATGGTGTGGGCGTTTCTGC 62.200 60.000 0.00 0.00 0.00 4.26
2493 10352 2.594592 GGTGTGGGCGTTTCTGCT 60.595 61.111 0.00 0.00 34.52 4.24
2494 10353 2.617274 GGTGTGGGCGTTTCTGCTC 61.617 63.158 0.00 0.00 35.30 4.26
2495 10354 2.281484 TGTGGGCGTTTCTGCTCC 60.281 61.111 0.00 0.00 33.12 4.70
2496 10355 3.423154 GTGGGCGTTTCTGCTCCG 61.423 66.667 0.00 0.00 33.12 4.63
2497 10356 4.697756 TGGGCGTTTCTGCTCCGG 62.698 66.667 0.00 0.00 33.12 5.14
2498 10357 4.699522 GGGCGTTTCTGCTCCGGT 62.700 66.667 0.00 0.00 34.52 5.28
2499 10358 3.423154 GGCGTTTCTGCTCCGGTG 61.423 66.667 0.00 0.00 34.52 4.94
2500 10359 4.090057 GCGTTTCTGCTCCGGTGC 62.090 66.667 21.41 21.41 0.00 5.01
2501 10360 2.357517 CGTTTCTGCTCCGGTGCT 60.358 61.111 27.24 0.00 0.00 4.40
2502 10361 2.383527 CGTTTCTGCTCCGGTGCTC 61.384 63.158 27.24 12.35 0.00 4.26
2503 10362 2.035442 GTTTCTGCTCCGGTGCTCC 61.035 63.158 27.24 8.50 0.00 4.70
2504 10363 3.254024 TTTCTGCTCCGGTGCTCCC 62.254 63.158 27.24 1.06 0.00 4.30
2509 10368 4.787280 CTCCGGTGCTCCCCTCCT 62.787 72.222 0.00 0.00 0.00 3.69
2521 10380 2.046892 CCTCCTGGGCTGAACACG 60.047 66.667 0.00 0.00 0.00 4.49
2522 10381 2.046892 CTCCTGGGCTGAACACGG 60.047 66.667 0.00 0.00 0.00 4.94
2523 10382 3.612247 CTCCTGGGCTGAACACGGG 62.612 68.421 0.00 0.00 0.00 5.28
2524 10383 4.722700 CCTGGGCTGAACACGGGG 62.723 72.222 0.00 0.00 0.00 5.73
2525 10384 3.953775 CTGGGCTGAACACGGGGT 61.954 66.667 0.00 0.00 0.00 4.95
2526 10385 4.263572 TGGGCTGAACACGGGGTG 62.264 66.667 0.00 0.00 39.75 4.61
2528 10387 3.948719 GGCTGAACACGGGGTGGA 61.949 66.667 0.42 0.00 37.94 4.02
2529 10388 2.112297 GCTGAACACGGGGTGGAA 59.888 61.111 0.42 0.00 37.94 3.53
2530 10389 1.527380 GCTGAACACGGGGTGGAAA 60.527 57.895 0.42 0.00 37.94 3.13
2531 10390 1.104577 GCTGAACACGGGGTGGAAAA 61.105 55.000 0.42 0.00 37.94 2.29
2532 10391 0.666374 CTGAACACGGGGTGGAAAAC 59.334 55.000 0.42 0.00 37.94 2.43
2533 10392 0.034380 TGAACACGGGGTGGAAAACA 60.034 50.000 0.42 0.00 37.94 2.83
2543 10402 2.240230 TGGAAAACACATCGACGGC 58.760 52.632 0.00 0.00 0.00 5.68
2544 10403 1.231958 TGGAAAACACATCGACGGCC 61.232 55.000 0.00 0.00 0.00 6.13
2545 10404 1.231958 GGAAAACACATCGACGGCCA 61.232 55.000 2.24 0.00 0.00 5.36
2546 10405 0.165944 GAAAACACATCGACGGCCAG 59.834 55.000 2.24 0.00 0.00 4.85
2547 10406 1.234615 AAAACACATCGACGGCCAGG 61.235 55.000 2.24 0.00 0.00 4.45
2548 10407 2.107041 AAACACATCGACGGCCAGGA 62.107 55.000 2.24 0.00 0.00 3.86
2549 10408 1.899437 AACACATCGACGGCCAGGAT 61.899 55.000 2.24 0.00 0.00 3.24
2550 10409 1.884464 CACATCGACGGCCAGGATG 60.884 63.158 20.29 20.29 42.45 3.51
2551 10410 2.058001 ACATCGACGGCCAGGATGA 61.058 57.895 25.83 8.31 39.89 2.92
2552 10411 1.143838 CATCGACGGCCAGGATGAA 59.856 57.895 18.18 0.00 39.89 2.57
2553 10412 1.144057 ATCGACGGCCAGGATGAAC 59.856 57.895 2.24 0.00 39.69 3.18
2554 10413 2.311688 ATCGACGGCCAGGATGAACC 62.312 60.000 2.24 0.00 39.69 3.62
2555 10414 2.668632 GACGGCCAGGATGAACCA 59.331 61.111 2.24 0.00 39.69 3.67
2556 10415 1.002624 GACGGCCAGGATGAACCAA 60.003 57.895 2.24 0.00 39.69 3.67
2557 10416 0.608035 GACGGCCAGGATGAACCAAA 60.608 55.000 2.24 0.00 39.69 3.28
2558 10417 0.178975 ACGGCCAGGATGAACCAAAA 60.179 50.000 2.24 0.00 39.69 2.44
2559 10418 0.965439 CGGCCAGGATGAACCAAAAA 59.035 50.000 2.24 0.00 39.69 1.94
2560 10419 1.336795 CGGCCAGGATGAACCAAAAAC 60.337 52.381 2.24 0.00 39.69 2.43
2561 10420 1.336795 GGCCAGGATGAACCAAAAACG 60.337 52.381 0.00 0.00 39.69 3.60
2562 10421 1.336795 GCCAGGATGAACCAAAAACGG 60.337 52.381 0.00 0.00 39.69 4.44
2563 10422 1.960689 CCAGGATGAACCAAAAACGGT 59.039 47.619 0.00 0.00 42.71 4.83
2572 10431 4.897025 AACCAAAAACGGTTCATAACGA 57.103 36.364 0.00 0.00 46.60 3.85
2573 10432 4.477302 ACCAAAAACGGTTCATAACGAG 57.523 40.909 0.00 0.00 34.91 4.18
2574 10433 3.251487 ACCAAAAACGGTTCATAACGAGG 59.749 43.478 0.00 0.00 34.91 4.63
2575 10434 3.365565 CCAAAAACGGTTCATAACGAGGG 60.366 47.826 0.00 0.00 0.00 4.30
2576 10435 2.103537 AAACGGTTCATAACGAGGGG 57.896 50.000 0.00 0.00 0.00 4.79
2577 10436 0.392060 AACGGTTCATAACGAGGGGC 60.392 55.000 0.00 0.00 0.00 5.80
2578 10437 1.219664 CGGTTCATAACGAGGGGCA 59.780 57.895 0.00 0.00 0.00 5.36
2579 10438 1.087771 CGGTTCATAACGAGGGGCAC 61.088 60.000 0.00 0.00 0.00 5.01
2580 10439 1.087771 GGTTCATAACGAGGGGCACG 61.088 60.000 0.00 0.00 0.00 5.34
2581 10440 1.087771 GTTCATAACGAGGGGCACGG 61.088 60.000 0.00 0.00 34.93 4.94
2582 10441 1.546589 TTCATAACGAGGGGCACGGT 61.547 55.000 0.00 0.00 34.93 4.83
2583 10442 1.520787 CATAACGAGGGGCACGGTC 60.521 63.158 0.00 0.00 34.93 4.79
2584 10443 3.072486 ATAACGAGGGGCACGGTCG 62.072 63.158 7.74 7.74 39.63 4.79
2588 10447 3.692406 GAGGGGCACGGTCGTCTT 61.692 66.667 0.00 0.00 0.00 3.01
2589 10448 3.236003 GAGGGGCACGGTCGTCTTT 62.236 63.158 0.00 0.00 0.00 2.52
2590 10449 3.047877 GGGGCACGGTCGTCTTTG 61.048 66.667 0.00 0.00 0.00 2.77
2591 10450 2.280592 GGGCACGGTCGTCTTTGT 60.281 61.111 0.00 0.00 0.00 2.83
2592 10451 1.890510 GGGCACGGTCGTCTTTGTT 60.891 57.895 0.00 0.00 0.00 2.83
2593 10452 1.278637 GGCACGGTCGTCTTTGTTG 59.721 57.895 0.00 0.00 0.00 3.33
2594 10453 1.368850 GCACGGTCGTCTTTGTTGC 60.369 57.895 0.00 0.00 0.00 4.17
2595 10454 1.278637 CACGGTCGTCTTTGTTGCC 59.721 57.895 0.00 0.00 0.00 4.52
2596 10455 1.890510 ACGGTCGTCTTTGTTGCCC 60.891 57.895 0.00 0.00 0.00 5.36
2597 10456 2.613506 CGGTCGTCTTTGTTGCCCC 61.614 63.158 0.00 0.00 0.00 5.80
2598 10457 2.265904 GGTCGTCTTTGTTGCCCCC 61.266 63.158 0.00 0.00 0.00 5.40
2599 10458 2.281208 TCGTCTTTGTTGCCCCCG 60.281 61.111 0.00 0.00 0.00 5.73
2600 10459 2.593436 CGTCTTTGTTGCCCCCGT 60.593 61.111 0.00 0.00 0.00 5.28
2601 10460 2.903547 CGTCTTTGTTGCCCCCGTG 61.904 63.158 0.00 0.00 0.00 4.94
2602 10461 1.826487 GTCTTTGTTGCCCCCGTGT 60.826 57.895 0.00 0.00 0.00 4.49
2603 10462 0.535553 GTCTTTGTTGCCCCCGTGTA 60.536 55.000 0.00 0.00 0.00 2.90
2604 10463 0.402504 TCTTTGTTGCCCCCGTGTAT 59.597 50.000 0.00 0.00 0.00 2.29
2605 10464 1.629353 TCTTTGTTGCCCCCGTGTATA 59.371 47.619 0.00 0.00 0.00 1.47
2606 10465 2.014128 CTTTGTTGCCCCCGTGTATAG 58.986 52.381 0.00 0.00 0.00 1.31
2607 10466 0.393267 TTGTTGCCCCCGTGTATAGC 60.393 55.000 0.00 0.00 0.00 2.97
2608 10467 1.525306 GTTGCCCCCGTGTATAGCC 60.525 63.158 0.00 0.00 0.00 3.93
2609 10468 3.096633 TTGCCCCCGTGTATAGCCG 62.097 63.158 0.00 0.00 0.00 5.52
2610 10469 3.543641 GCCCCCGTGTATAGCCGT 61.544 66.667 0.00 0.00 0.00 5.68
2611 10470 2.732658 CCCCCGTGTATAGCCGTC 59.267 66.667 0.00 0.00 0.00 4.79
2612 10471 2.333938 CCCCGTGTATAGCCGTCG 59.666 66.667 0.00 0.00 0.00 5.12
2613 10472 2.188829 CCCCGTGTATAGCCGTCGA 61.189 63.158 0.00 0.00 0.00 4.20
2614 10473 1.281960 CCCGTGTATAGCCGTCGAG 59.718 63.158 0.00 0.00 0.00 4.04
2615 10474 1.281960 CCGTGTATAGCCGTCGAGG 59.718 63.158 0.00 0.00 44.97 4.63
2616 10475 1.162181 CCGTGTATAGCCGTCGAGGA 61.162 60.000 6.70 0.00 45.00 3.71
2617 10476 0.235144 CGTGTATAGCCGTCGAGGAG 59.765 60.000 6.70 0.00 45.00 3.69
2618 10477 0.040246 GTGTATAGCCGTCGAGGAGC 60.040 60.000 6.70 8.46 45.00 4.70
2619 10478 1.170919 TGTATAGCCGTCGAGGAGCC 61.171 60.000 6.70 0.00 45.00 4.70
2620 10479 1.602888 TATAGCCGTCGAGGAGCCC 60.603 63.158 6.70 0.00 45.00 5.19
2621 10480 2.065470 TATAGCCGTCGAGGAGCCCT 62.065 60.000 6.70 0.00 45.00 5.19
2626 10485 3.151022 GTCGAGGAGCCCTGGGAG 61.151 72.222 19.27 0.00 31.76 4.30
2627 10486 4.465446 TCGAGGAGCCCTGGGAGG 62.465 72.222 19.27 0.00 31.76 4.30
2646 10505 4.211502 CCGTACGGGCCCGGTTAG 62.212 72.222 44.99 31.15 44.69 2.34
2647 10506 3.140141 CGTACGGGCCCGGTTAGA 61.140 66.667 44.99 23.25 44.69 2.10
2648 10507 2.492773 CGTACGGGCCCGGTTAGAT 61.493 63.158 44.99 27.21 44.69 1.98
2649 10508 1.365267 GTACGGGCCCGGTTAGATC 59.635 63.158 44.99 22.90 44.69 2.75
2650 10509 2.195567 TACGGGCCCGGTTAGATCG 61.196 63.158 44.99 19.50 44.69 3.69
2651 10510 2.909457 TACGGGCCCGGTTAGATCGT 62.909 60.000 44.99 24.92 44.69 3.73
2652 10511 2.195567 CGGGCCCGGTTAGATCGTA 61.196 63.158 37.42 0.00 35.56 3.43
2653 10512 1.530013 CGGGCCCGGTTAGATCGTAT 61.530 60.000 37.42 0.00 35.56 3.06
2654 10513 0.037605 GGGCCCGGTTAGATCGTATG 60.038 60.000 5.69 0.00 0.00 2.39
2655 10514 0.669625 GGCCCGGTTAGATCGTATGC 60.670 60.000 0.00 0.00 0.00 3.14
2656 10515 0.669625 GCCCGGTTAGATCGTATGCC 60.670 60.000 0.00 0.00 0.00 4.40
2657 10516 0.037605 CCCGGTTAGATCGTATGCCC 60.038 60.000 0.00 0.00 0.00 5.36
2658 10517 0.388134 CCGGTTAGATCGTATGCCCG 60.388 60.000 0.00 0.00 0.00 6.13
2659 10518 0.388134 CGGTTAGATCGTATGCCCGG 60.388 60.000 0.00 0.00 0.00 5.73
2660 10519 0.669625 GGTTAGATCGTATGCCCGGC 60.670 60.000 1.04 1.04 0.00 6.13
2661 10520 0.669625 GTTAGATCGTATGCCCGGCC 60.670 60.000 7.03 0.00 0.00 6.13
2662 10521 1.116536 TTAGATCGTATGCCCGGCCA 61.117 55.000 7.03 0.00 0.00 5.36
2663 10522 0.902984 TAGATCGTATGCCCGGCCAT 60.903 55.000 7.03 2.35 0.00 4.40
2664 10523 0.902984 AGATCGTATGCCCGGCCATA 60.903 55.000 7.03 0.00 0.00 2.74
2665 10524 0.178068 GATCGTATGCCCGGCCATAT 59.822 55.000 8.59 0.00 31.01 1.78
2666 10525 1.411246 GATCGTATGCCCGGCCATATA 59.589 52.381 8.59 0.76 31.01 0.86
2667 10526 0.533491 TCGTATGCCCGGCCATATAC 59.467 55.000 8.59 7.57 31.01 1.47
2668 10527 0.804544 CGTATGCCCGGCCATATACG 60.805 60.000 20.19 20.19 41.28 3.06
2669 10528 0.248289 GTATGCCCGGCCATATACGT 59.752 55.000 8.59 0.00 31.01 3.57
2670 10529 1.477700 GTATGCCCGGCCATATACGTA 59.522 52.381 8.59 0.00 31.01 3.57
2671 10530 1.200519 ATGCCCGGCCATATACGTAT 58.799 50.000 13.54 13.54 0.00 3.06
2672 10531 0.248012 TGCCCGGCCATATACGTATG 59.752 55.000 18.37 4.78 37.93 2.39
2673 10532 1.087771 GCCCGGCCATATACGTATGC 61.088 60.000 18.37 12.52 37.06 3.14
2674 10533 0.461339 CCCGGCCATATACGTATGCC 60.461 60.000 20.23 20.23 37.06 4.40
2675 10534 0.461339 CCGGCCATATACGTATGCCC 60.461 60.000 22.76 14.28 37.06 5.36
2676 10535 3.059603 GGCCATATACGTATGCCCG 57.940 57.895 19.72 6.73 37.06 6.13
2677 10536 0.248289 GGCCATATACGTATGCCCGT 59.752 55.000 19.72 0.00 44.50 5.28
2678 10537 1.636988 GCCATATACGTATGCCCGTC 58.363 55.000 18.37 0.00 42.00 4.79
2679 10538 1.738030 GCCATATACGTATGCCCGTCC 60.738 57.143 18.37 0.00 42.00 4.79
2680 10539 1.546923 CCATATACGTATGCCCGTCCA 59.453 52.381 18.37 0.00 42.00 4.02
2681 10540 2.167693 CCATATACGTATGCCCGTCCAT 59.832 50.000 18.37 0.00 42.00 3.41
2682 10541 3.382227 CCATATACGTATGCCCGTCCATA 59.618 47.826 18.37 0.00 42.00 2.74
2683 10542 4.038763 CCATATACGTATGCCCGTCCATAT 59.961 45.833 18.37 0.00 42.00 1.78
2684 10543 5.242171 CCATATACGTATGCCCGTCCATATA 59.758 44.000 18.37 0.00 42.00 0.86
2685 10544 4.644103 ATACGTATGCCCGTCCATATAC 57.356 45.455 7.41 0.00 42.00 1.47
2686 10545 1.904144 CGTATGCCCGTCCATATACG 58.096 55.000 0.00 0.00 41.28 3.06
2687 10546 1.200716 CGTATGCCCGTCCATATACGT 59.799 52.381 0.00 0.00 41.82 3.57
2688 10547 2.419673 CGTATGCCCGTCCATATACGTA 59.580 50.000 0.00 0.00 41.82 3.57
2689 10548 3.065786 CGTATGCCCGTCCATATACGTAT 59.934 47.826 13.54 13.54 41.82 3.06
2690 10549 4.439153 CGTATGCCCGTCCATATACGTATT 60.439 45.833 14.33 0.00 41.82 1.89
2691 10550 4.546829 ATGCCCGTCCATATACGTATTT 57.453 40.909 14.33 2.61 41.27 1.40
2692 10551 3.655486 TGCCCGTCCATATACGTATTTG 58.345 45.455 14.33 15.55 41.27 2.32
2693 10552 3.069872 TGCCCGTCCATATACGTATTTGT 59.930 43.478 20.12 4.17 41.27 2.83
2694 10553 4.060205 GCCCGTCCATATACGTATTTGTT 58.940 43.478 20.12 0.00 41.27 2.83
2695 10554 4.512571 GCCCGTCCATATACGTATTTGTTT 59.487 41.667 20.12 0.00 41.27 2.83
2696 10555 5.559417 GCCCGTCCATATACGTATTTGTTTG 60.559 44.000 20.12 11.30 41.27 2.93
2697 10556 5.524646 CCCGTCCATATACGTATTTGTTTGT 59.475 40.000 20.12 0.00 41.27 2.83
2698 10557 6.700960 CCCGTCCATATACGTATTTGTTTGTA 59.299 38.462 20.12 0.00 41.27 2.41
2699 10558 7.385752 CCCGTCCATATACGTATTTGTTTGTAT 59.614 37.037 20.12 2.11 41.27 2.29
2700 10559 9.409312 CCGTCCATATACGTATTTGTTTGTATA 57.591 33.333 20.12 0.00 41.27 1.47
2706 10565 3.852574 CGTATTTGTTTGTATACGGCGG 58.147 45.455 13.24 0.00 43.45 6.13
2707 10566 2.836479 ATTTGTTTGTATACGGCGGC 57.164 45.000 13.24 0.00 0.00 6.53
2708 10567 0.803740 TTTGTTTGTATACGGCGGCC 59.196 50.000 13.24 9.54 0.00 6.13
2709 10568 0.036199 TTGTTTGTATACGGCGGCCT 60.036 50.000 18.34 6.83 0.00 5.19
2710 10569 0.036199 TGTTTGTATACGGCGGCCTT 60.036 50.000 18.34 10.80 0.00 4.35
2711 10570 1.089112 GTTTGTATACGGCGGCCTTT 58.911 50.000 18.34 6.34 0.00 3.11
2712 10571 1.063027 GTTTGTATACGGCGGCCTTTC 59.937 52.381 18.34 3.76 0.00 2.62
2713 10572 0.249676 TTGTATACGGCGGCCTTTCA 59.750 50.000 18.34 6.32 0.00 2.69
2714 10573 0.466543 TGTATACGGCGGCCTTTCAT 59.533 50.000 18.34 7.06 0.00 2.57
2715 10574 0.865769 GTATACGGCGGCCTTTCATG 59.134 55.000 18.34 2.34 0.00 3.07
2716 10575 0.882927 TATACGGCGGCCTTTCATGC 60.883 55.000 18.34 0.00 0.00 4.06
2717 10576 2.884997 ATACGGCGGCCTTTCATGCA 62.885 55.000 18.34 0.00 0.00 3.96
2718 10577 4.481112 CGGCGGCCTTTCATGCAC 62.481 66.667 18.34 0.00 0.00 4.57
2719 10578 4.481112 GGCGGCCTTTCATGCACG 62.481 66.667 12.87 0.00 0.00 5.34
2721 10580 4.817063 CGGCCTTTCATGCACGCG 62.817 66.667 3.53 3.53 0.00 6.01
2722 10581 3.737172 GGCCTTTCATGCACGCGT 61.737 61.111 5.58 5.58 0.00 6.01
2723 10582 2.502510 GCCTTTCATGCACGCGTG 60.503 61.111 34.01 34.01 0.00 5.34
2724 10583 2.965147 GCCTTTCATGCACGCGTGA 61.965 57.895 41.19 25.87 39.86 4.35
2725 10584 1.573932 CCTTTCATGCACGCGTGAA 59.426 52.632 41.19 33.78 46.42 3.18
2727 10586 2.555782 TTCATGCACGCGTGAAGC 59.444 55.556 41.19 26.84 44.19 3.86
2728 10587 2.965147 TTCATGCACGCGTGAAGCC 61.965 57.895 41.19 23.91 44.19 4.35
2729 10588 4.799473 CATGCACGCGTGAAGCCG 62.799 66.667 41.19 20.52 44.76 5.52
2754 10613 4.927782 GTGGGGCAGCACGTGTCA 62.928 66.667 18.38 3.85 29.31 3.58
2755 10614 4.927782 TGGGGCAGCACGTGTCAC 62.928 66.667 18.38 7.82 33.22 3.67
2765 10624 3.545911 CGTGTCACGGGTAGTTGC 58.454 61.111 17.75 0.00 38.08 4.17
2766 10625 2.025418 CGTGTCACGGGTAGTTGCC 61.025 63.158 17.75 0.00 38.08 4.52
2767 10626 1.070105 GTGTCACGGGTAGTTGCCA 59.930 57.895 0.00 0.00 0.00 4.92
2768 10627 0.533308 GTGTCACGGGTAGTTGCCAA 60.533 55.000 0.00 0.00 0.00 4.52
2769 10628 0.180642 TGTCACGGGTAGTTGCCAAA 59.819 50.000 0.00 0.00 0.00 3.28
2770 10629 1.310904 GTCACGGGTAGTTGCCAAAA 58.689 50.000 0.00 0.00 0.00 2.44
2771 10630 1.002142 GTCACGGGTAGTTGCCAAAAC 60.002 52.381 0.00 0.00 0.00 2.43
2772 10631 1.134037 TCACGGGTAGTTGCCAAAACT 60.134 47.619 0.00 0.00 0.00 2.66
2773 10632 1.001815 CACGGGTAGTTGCCAAAACTG 60.002 52.381 1.05 0.00 0.00 3.16
2774 10633 1.314730 CGGGTAGTTGCCAAAACTGT 58.685 50.000 1.05 0.00 0.00 3.55
2775 10634 1.265905 CGGGTAGTTGCCAAAACTGTC 59.734 52.381 1.05 0.00 0.00 3.51
2776 10635 1.611977 GGGTAGTTGCCAAAACTGTCC 59.388 52.381 1.05 4.03 0.00 4.02
2777 10636 1.611977 GGTAGTTGCCAAAACTGTCCC 59.388 52.381 1.05 0.00 0.00 4.46
2778 10637 2.303175 GTAGTTGCCAAAACTGTCCCA 58.697 47.619 1.05 0.00 0.00 4.37
2779 10638 2.086610 AGTTGCCAAAACTGTCCCAT 57.913 45.000 0.00 0.00 0.00 4.00
2780 10639 1.963515 AGTTGCCAAAACTGTCCCATC 59.036 47.619 0.00 0.00 0.00 3.51
2781 10640 1.686052 GTTGCCAAAACTGTCCCATCA 59.314 47.619 0.00 0.00 0.00 3.07
2782 10641 2.299867 GTTGCCAAAACTGTCCCATCAT 59.700 45.455 0.00 0.00 0.00 2.45
2783 10642 3.448093 TGCCAAAACTGTCCCATCATA 57.552 42.857 0.00 0.00 0.00 2.15
2784 10643 3.979911 TGCCAAAACTGTCCCATCATAT 58.020 40.909 0.00 0.00 0.00 1.78
2785 10644 5.122707 TGCCAAAACTGTCCCATCATATA 57.877 39.130 0.00 0.00 0.00 0.86
2786 10645 5.514169 TGCCAAAACTGTCCCATCATATAA 58.486 37.500 0.00 0.00 0.00 0.98
2787 10646 5.954752 TGCCAAAACTGTCCCATCATATAAA 59.045 36.000 0.00 0.00 0.00 1.40
2788 10647 6.610830 TGCCAAAACTGTCCCATCATATAAAT 59.389 34.615 0.00 0.00 0.00 1.40
2789 10648 6.925165 GCCAAAACTGTCCCATCATATAAATG 59.075 38.462 0.00 0.00 0.00 2.32
2790 10649 7.417797 GCCAAAACTGTCCCATCATATAAATGT 60.418 37.037 0.00 0.00 34.50 2.71
2791 10650 7.922278 CCAAAACTGTCCCATCATATAAATGTG 59.078 37.037 0.00 0.00 34.50 3.21
2792 10651 7.587037 AAACTGTCCCATCATATAAATGTGG 57.413 36.000 0.00 0.00 35.63 4.17
2793 10652 6.514012 ACTGTCCCATCATATAAATGTGGA 57.486 37.500 7.91 3.07 36.87 4.02
2794 10653 6.299141 ACTGTCCCATCATATAAATGTGGAC 58.701 40.000 19.27 19.27 41.91 4.02
2795 10654 5.304778 TGTCCCATCATATAAATGTGGACG 58.695 41.667 19.91 0.00 43.03 4.79
2796 10655 4.695455 GTCCCATCATATAAATGTGGACGG 59.305 45.833 15.42 4.96 37.48 4.79
2797 10656 3.440173 CCCATCATATAAATGTGGACGGC 59.560 47.826 7.91 0.00 36.87 5.68
2798 10657 4.071423 CCATCATATAAATGTGGACGGCA 58.929 43.478 0.00 0.00 36.87 5.69
2799 10658 4.518590 CCATCATATAAATGTGGACGGCAA 59.481 41.667 0.00 0.00 36.87 4.52
2800 10659 5.451908 CATCATATAAATGTGGACGGCAAC 58.548 41.667 0.00 0.00 34.50 4.17
2801 10660 3.880490 TCATATAAATGTGGACGGCAACC 59.120 43.478 0.00 0.00 34.50 3.77
2802 10661 2.208132 ATAAATGTGGACGGCAACCA 57.792 45.000 0.00 0.00 34.84 3.67
2807 10666 3.948719 TGGACGGCAACCACCTCC 61.949 66.667 0.00 0.00 32.03 4.30
2827 10686 3.140141 CCGCATCGCCCACCATTT 61.140 61.111 0.00 0.00 0.00 2.32
2828 10687 2.408835 CGCATCGCCCACCATTTC 59.591 61.111 0.00 0.00 0.00 2.17
2829 10688 2.807622 GCATCGCCCACCATTTCC 59.192 61.111 0.00 0.00 0.00 3.13
2830 10689 2.785425 GCATCGCCCACCATTTCCC 61.785 63.158 0.00 0.00 0.00 3.97
2831 10690 2.127232 CATCGCCCACCATTTCCCC 61.127 63.158 0.00 0.00 0.00 4.81
2832 10691 3.373932 ATCGCCCACCATTTCCCCC 62.374 63.158 0.00 0.00 0.00 5.40
2850 10709 4.933064 CGCCGCATCGTCTCCCTC 62.933 72.222 0.00 0.00 0.00 4.30
2851 10710 3.532155 GCCGCATCGTCTCCCTCT 61.532 66.667 0.00 0.00 0.00 3.69
2852 10711 2.725008 CCGCATCGTCTCCCTCTC 59.275 66.667 0.00 0.00 0.00 3.20
2853 10712 1.826054 CCGCATCGTCTCCCTCTCT 60.826 63.158 0.00 0.00 0.00 3.10
2854 10713 1.652012 CGCATCGTCTCCCTCTCTC 59.348 63.158 0.00 0.00 0.00 3.20
2855 10714 1.791103 CGCATCGTCTCCCTCTCTCC 61.791 65.000 0.00 0.00 0.00 3.71
2856 10715 0.753479 GCATCGTCTCCCTCTCTCCA 60.753 60.000 0.00 0.00 0.00 3.86
2857 10716 1.028905 CATCGTCTCCCTCTCTCCAC 58.971 60.000 0.00 0.00 0.00 4.02
2858 10717 0.923358 ATCGTCTCCCTCTCTCCACT 59.077 55.000 0.00 0.00 0.00 4.00
2859 10718 0.253610 TCGTCTCCCTCTCTCCACTC 59.746 60.000 0.00 0.00 0.00 3.51
2860 10719 0.750182 CGTCTCCCTCTCTCCACTCC 60.750 65.000 0.00 0.00 0.00 3.85
2861 10720 0.396556 GTCTCCCTCTCTCCACTCCC 60.397 65.000 0.00 0.00 0.00 4.30
2862 10721 1.075600 CTCCCTCTCTCCACTCCCC 60.076 68.421 0.00 0.00 0.00 4.81
2863 10722 1.862138 TCCCTCTCTCCACTCCCCA 60.862 63.158 0.00 0.00 0.00 4.96
2864 10723 1.687493 CCCTCTCTCCACTCCCCAC 60.687 68.421 0.00 0.00 0.00 4.61
2865 10724 1.390125 CCTCTCTCCACTCCCCACT 59.610 63.158 0.00 0.00 0.00 4.00
2866 10725 0.686112 CCTCTCTCCACTCCCCACTC 60.686 65.000 0.00 0.00 0.00 3.51
2867 10726 0.686112 CTCTCTCCACTCCCCACTCC 60.686 65.000 0.00 0.00 0.00 3.85
2868 10727 1.687493 CTCTCCACTCCCCACTCCC 60.687 68.421 0.00 0.00 0.00 4.30
2869 10728 2.689034 CTCCACTCCCCACTCCCC 60.689 72.222 0.00 0.00 0.00 4.81
2870 10729 3.537506 TCCACTCCCCACTCCCCA 61.538 66.667 0.00 0.00 0.00 4.96
2871 10730 3.330720 CCACTCCCCACTCCCCAC 61.331 72.222 0.00 0.00 0.00 4.61
2872 10731 2.203998 CACTCCCCACTCCCCACT 60.204 66.667 0.00 0.00 0.00 4.00
2873 10732 1.847968 CACTCCCCACTCCCCACTT 60.848 63.158 0.00 0.00 0.00 3.16
2874 10733 1.539124 ACTCCCCACTCCCCACTTC 60.539 63.158 0.00 0.00 0.00 3.01
2875 10734 2.204090 TCCCCACTCCCCACTTCC 60.204 66.667 0.00 0.00 0.00 3.46
2876 10735 2.204151 CCCCACTCCCCACTTCCT 60.204 66.667 0.00 0.00 0.00 3.36
2877 10736 2.301738 CCCCACTCCCCACTTCCTC 61.302 68.421 0.00 0.00 0.00 3.71
2878 10737 1.229658 CCCACTCCCCACTTCCTCT 60.230 63.158 0.00 0.00 0.00 3.69
2879 10738 1.268283 CCCACTCCCCACTTCCTCTC 61.268 65.000 0.00 0.00 0.00 3.20
2880 10739 1.268283 CCACTCCCCACTTCCTCTCC 61.268 65.000 0.00 0.00 0.00 3.71
2881 10740 0.252467 CACTCCCCACTTCCTCTCCT 60.252 60.000 0.00 0.00 0.00 3.69
2882 10741 0.041982 ACTCCCCACTTCCTCTCCTC 59.958 60.000 0.00 0.00 0.00 3.71
2883 10742 0.338120 CTCCCCACTTCCTCTCCTCT 59.662 60.000 0.00 0.00 0.00 3.69
2884 10743 0.336737 TCCCCACTTCCTCTCCTCTC 59.663 60.000 0.00 0.00 0.00 3.20
2885 10744 0.689412 CCCCACTTCCTCTCCTCTCC 60.689 65.000 0.00 0.00 0.00 3.71
2886 10745 0.041833 CCCACTTCCTCTCCTCTCCA 59.958 60.000 0.00 0.00 0.00 3.86
2887 10746 1.553417 CCCACTTCCTCTCCTCTCCAA 60.553 57.143 0.00 0.00 0.00 3.53
2888 10747 1.552792 CCACTTCCTCTCCTCTCCAAC 59.447 57.143 0.00 0.00 0.00 3.77
2889 10748 1.552792 CACTTCCTCTCCTCTCCAACC 59.447 57.143 0.00 0.00 0.00 3.77
2890 10749 1.435168 ACTTCCTCTCCTCTCCAACCT 59.565 52.381 0.00 0.00 0.00 3.50
2891 10750 2.107366 CTTCCTCTCCTCTCCAACCTC 58.893 57.143 0.00 0.00 0.00 3.85
2892 10751 0.336737 TCCTCTCCTCTCCAACCTCC 59.663 60.000 0.00 0.00 0.00 4.30
2893 10752 0.338120 CCTCTCCTCTCCAACCTCCT 59.662 60.000 0.00 0.00 0.00 3.69
2894 10753 1.687996 CCTCTCCTCTCCAACCTCCTC 60.688 61.905 0.00 0.00 0.00 3.71
2895 10754 0.033991 TCTCCTCTCCAACCTCCTCG 60.034 60.000 0.00 0.00 0.00 4.63
2896 10755 0.323908 CTCCTCTCCAACCTCCTCGT 60.324 60.000 0.00 0.00 0.00 4.18
2897 10756 0.323542 TCCTCTCCAACCTCCTCGTC 60.324 60.000 0.00 0.00 0.00 4.20
2898 10757 0.323908 CCTCTCCAACCTCCTCGTCT 60.324 60.000 0.00 0.00 0.00 4.18
2899 10758 1.099689 CTCTCCAACCTCCTCGTCTC 58.900 60.000 0.00 0.00 0.00 3.36
2900 10759 0.323542 TCTCCAACCTCCTCGTCTCC 60.324 60.000 0.00 0.00 0.00 3.71
2901 10760 1.305046 TCCAACCTCCTCGTCTCCC 60.305 63.158 0.00 0.00 0.00 4.30
2902 10761 1.305381 CCAACCTCCTCGTCTCCCT 60.305 63.158 0.00 0.00 0.00 4.20
2903 10762 1.324005 CCAACCTCCTCGTCTCCCTC 61.324 65.000 0.00 0.00 0.00 4.30
2904 10763 0.612174 CAACCTCCTCGTCTCCCTCA 60.612 60.000 0.00 0.00 0.00 3.86
2905 10764 0.612453 AACCTCCTCGTCTCCCTCAC 60.612 60.000 0.00 0.00 0.00 3.51
2906 10765 1.755008 CCTCCTCGTCTCCCTCACC 60.755 68.421 0.00 0.00 0.00 4.02
2907 10766 2.045242 TCCTCGTCTCCCTCACCG 60.045 66.667 0.00 0.00 0.00 4.94
2908 10767 3.827898 CCTCGTCTCCCTCACCGC 61.828 72.222 0.00 0.00 0.00 5.68
2909 10768 3.062466 CTCGTCTCCCTCACCGCA 61.062 66.667 0.00 0.00 0.00 5.69
2910 10769 2.362503 TCGTCTCCCTCACCGCAT 60.363 61.111 0.00 0.00 0.00 4.73
2911 10770 2.105128 CGTCTCCCTCACCGCATC 59.895 66.667 0.00 0.00 0.00 3.91
2912 10771 2.501610 GTCTCCCTCACCGCATCC 59.498 66.667 0.00 0.00 0.00 3.51
2913 10772 2.060980 GTCTCCCTCACCGCATCCT 61.061 63.158 0.00 0.00 0.00 3.24
2914 10773 1.758514 TCTCCCTCACCGCATCCTC 60.759 63.158 0.00 0.00 0.00 3.71
2915 10774 1.760086 CTCCCTCACCGCATCCTCT 60.760 63.158 0.00 0.00 0.00 3.69
2916 10775 1.743321 CTCCCTCACCGCATCCTCTC 61.743 65.000 0.00 0.00 0.00 3.20
2917 10776 2.801631 CCCTCACCGCATCCTCTCC 61.802 68.421 0.00 0.00 0.00 3.71
2918 10777 2.060383 CCTCACCGCATCCTCTCCA 61.060 63.158 0.00 0.00 0.00 3.86
2919 10778 1.406065 CCTCACCGCATCCTCTCCAT 61.406 60.000 0.00 0.00 0.00 3.41
2920 10779 0.033228 CTCACCGCATCCTCTCCATC 59.967 60.000 0.00 0.00 0.00 3.51
2921 10780 1.300465 CACCGCATCCTCTCCATCG 60.300 63.158 0.00 0.00 0.00 3.84
2922 10781 2.356793 CCGCATCCTCTCCATCGC 60.357 66.667 0.00 0.00 0.00 4.58
2923 10782 2.356793 CGCATCCTCTCCATCGCC 60.357 66.667 0.00 0.00 0.00 5.54
2924 10783 2.824546 GCATCCTCTCCATCGCCA 59.175 61.111 0.00 0.00 0.00 5.69
2925 10784 1.374190 GCATCCTCTCCATCGCCAT 59.626 57.895 0.00 0.00 0.00 4.40
2926 10785 0.954449 GCATCCTCTCCATCGCCATG 60.954 60.000 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 1521 8.752187 ACATATGAATTTTAGTTGCCATGTTCT 58.248 29.630 10.38 0.00 0.00 3.01
122 1558 9.726034 GAAAATAGAATGCACAAAATACAAACG 57.274 29.630 0.00 0.00 0.00 3.60
157 1598 7.514784 TGTTCAGAAAGATGACATGTCAAAT 57.485 32.000 31.00 19.66 43.58 2.32
256 1704 4.935352 ATGGCAAGTTCTACAGCAAAAA 57.065 36.364 0.00 0.00 0.00 1.94
419 1877 6.988522 TGAAAAGGCATAAAAAGGACTAACC 58.011 36.000 0.00 0.00 39.35 2.85
455 1913 3.134081 GCACCTACAGTAGAAGGCCATTA 59.866 47.826 5.01 0.00 36.24 1.90
493 2889 7.601508 ACGGAAGGAGTAGTATGTAACAAAAAG 59.398 37.037 0.00 0.00 0.00 2.27
498 2894 5.503927 AGACGGAAGGAGTAGTATGTAACA 58.496 41.667 0.00 0.00 0.00 2.41
499 2895 5.587844 TGAGACGGAAGGAGTAGTATGTAAC 59.412 44.000 0.00 0.00 0.00 2.50
501 2897 5.363562 TGAGACGGAAGGAGTAGTATGTA 57.636 43.478 0.00 0.00 0.00 2.29
502 2898 4.232188 TGAGACGGAAGGAGTAGTATGT 57.768 45.455 0.00 0.00 0.00 2.29
504 2900 6.793505 ATTTTGAGACGGAAGGAGTAGTAT 57.206 37.500 0.00 0.00 0.00 2.12
506 2902 5.485209 AATTTTGAGACGGAAGGAGTAGT 57.515 39.130 0.00 0.00 0.00 2.73
511 2907 5.592688 AGACAAAAATTTTGAGACGGAAGGA 59.407 36.000 23.39 0.00 0.00 3.36
514 2910 7.763356 TGTAAGACAAAAATTTTGAGACGGAA 58.237 30.769 23.39 2.68 0.00 4.30
515 2911 7.323049 TGTAAGACAAAAATTTTGAGACGGA 57.677 32.000 23.39 2.42 0.00 4.69
532 2928 9.332301 GCATTCGTATCTAGACTAATGTAAGAC 57.668 37.037 14.63 1.58 35.80 3.01
534 2930 9.119329 GTGCATTCGTATCTAGACTAATGTAAG 57.881 37.037 14.63 0.08 35.80 2.34
537 2933 7.278461 AGTGCATTCGTATCTAGACTAATGT 57.722 36.000 14.63 0.00 35.80 2.71
538 2934 9.847706 ATTAGTGCATTCGTATCTAGACTAATG 57.152 33.333 0.00 4.40 35.23 1.90
553 2949 9.769093 AAGTCACGTTTTAATATTAGTGCATTC 57.231 29.630 7.41 0.00 0.00 2.67
554 2950 9.554724 CAAGTCACGTTTTAATATTAGTGCATT 57.445 29.630 7.41 0.00 0.00 3.56
555 2951 8.941977 TCAAGTCACGTTTTAATATTAGTGCAT 58.058 29.630 7.41 0.00 0.00 3.96
567 2963 8.706492 ATACGGATTTATCAAGTCACGTTTTA 57.294 30.769 0.00 0.00 34.89 1.52
568 2964 5.934935 ACGGATTTATCAAGTCACGTTTT 57.065 34.783 0.00 0.00 0.00 2.43
569 2965 7.039882 AGATACGGATTTATCAAGTCACGTTT 58.960 34.615 0.00 0.00 34.89 3.60
570 2966 6.570692 AGATACGGATTTATCAAGTCACGTT 58.429 36.000 0.00 0.00 34.89 3.99
571 2967 6.145338 AGATACGGATTTATCAAGTCACGT 57.855 37.500 0.00 0.00 37.14 4.49
572 2968 5.339875 CGAGATACGGATTTATCAAGTCACG 59.660 44.000 0.00 0.00 38.46 4.35
573 2969 6.360148 GTCGAGATACGGATTTATCAAGTCAC 59.640 42.308 0.00 0.00 42.82 3.67
575 2971 6.436261 TGTCGAGATACGGATTTATCAAGTC 58.564 40.000 0.00 0.00 42.82 3.01
576 2972 6.387041 TGTCGAGATACGGATTTATCAAGT 57.613 37.500 0.00 0.00 42.82 3.16
577 2973 7.694388 TTTGTCGAGATACGGATTTATCAAG 57.306 36.000 0.00 0.00 42.82 3.02
578 2974 8.657074 AATTTGTCGAGATACGGATTTATCAA 57.343 30.769 0.00 0.00 42.82 2.57
582 2978 9.806203 TCTTAAATTTGTCGAGATACGGATTTA 57.194 29.630 0.00 0.00 42.82 1.40
583 2979 8.601476 GTCTTAAATTTGTCGAGATACGGATTT 58.399 33.333 0.00 0.00 42.82 2.17
584 2980 7.762615 TGTCTTAAATTTGTCGAGATACGGATT 59.237 33.333 0.00 0.00 42.82 3.01
585 2981 7.262772 TGTCTTAAATTTGTCGAGATACGGAT 58.737 34.615 0.00 0.00 42.82 4.18
586 2982 6.623486 TGTCTTAAATTTGTCGAGATACGGA 58.377 36.000 0.00 0.00 42.82 4.69
587 2983 6.880822 TGTCTTAAATTTGTCGAGATACGG 57.119 37.500 0.00 0.00 42.82 4.02
588 2984 8.169839 TCTTGTCTTAAATTTGTCGAGATACG 57.830 34.615 0.00 0.00 44.09 3.06
594 2990 9.243637 CCAAAATTCTTGTCTTAAATTTGTCGA 57.756 29.630 0.00 0.00 33.95 4.20
595 2991 8.487176 CCCAAAATTCTTGTCTTAAATTTGTCG 58.513 33.333 0.00 0.00 33.95 4.35
596 2992 9.541143 TCCCAAAATTCTTGTCTTAAATTTGTC 57.459 29.630 0.00 0.00 33.95 3.18
597 2993 9.325198 GTCCCAAAATTCTTGTCTTAAATTTGT 57.675 29.630 0.00 0.00 33.95 2.83
598 2994 9.323985 TGTCCCAAAATTCTTGTCTTAAATTTG 57.676 29.630 0.00 0.00 33.95 2.32
599 2995 9.546428 CTGTCCCAAAATTCTTGTCTTAAATTT 57.454 29.630 0.00 0.00 34.86 1.82
600 2996 8.923270 TCTGTCCCAAAATTCTTGTCTTAAATT 58.077 29.630 0.00 0.00 0.00 1.82
601 2997 8.477419 TCTGTCCCAAAATTCTTGTCTTAAAT 57.523 30.769 0.00 0.00 0.00 1.40
602 2998 7.014230 CCTCTGTCCCAAAATTCTTGTCTTAAA 59.986 37.037 0.00 0.00 0.00 1.52
603 2999 6.490040 CCTCTGTCCCAAAATTCTTGTCTTAA 59.510 38.462 0.00 0.00 0.00 1.85
604 3000 6.003950 CCTCTGTCCCAAAATTCTTGTCTTA 58.996 40.000 0.00 0.00 0.00 2.10
605 3001 4.829492 CCTCTGTCCCAAAATTCTTGTCTT 59.171 41.667 0.00 0.00 0.00 3.01
606 3002 4.401925 CCTCTGTCCCAAAATTCTTGTCT 58.598 43.478 0.00 0.00 0.00 3.41
607 3003 3.507622 CCCTCTGTCCCAAAATTCTTGTC 59.492 47.826 0.00 0.00 0.00 3.18
608 3004 3.140144 TCCCTCTGTCCCAAAATTCTTGT 59.860 43.478 0.00 0.00 0.00 3.16
609 3005 3.760684 CTCCCTCTGTCCCAAAATTCTTG 59.239 47.826 0.00 0.00 0.00 3.02
610 3006 3.399305 ACTCCCTCTGTCCCAAAATTCTT 59.601 43.478 0.00 0.00 0.00 2.52
611 3007 2.989571 ACTCCCTCTGTCCCAAAATTCT 59.010 45.455 0.00 0.00 0.00 2.40
612 3008 3.441500 ACTCCCTCTGTCCCAAAATTC 57.558 47.619 0.00 0.00 0.00 2.17
613 3009 5.536497 AATACTCCCTCTGTCCCAAAATT 57.464 39.130 0.00 0.00 0.00 1.82
614 3010 6.848562 ATAATACTCCCTCTGTCCCAAAAT 57.151 37.500 0.00 0.00 0.00 1.82
615 3011 6.652205 AATAATACTCCCTCTGTCCCAAAA 57.348 37.500 0.00 0.00 0.00 2.44
616 3012 7.947782 ATAATAATACTCCCTCTGTCCCAAA 57.052 36.000 0.00 0.00 0.00 3.28
617 3013 8.239478 AGTATAATAATACTCCCTCTGTCCCAA 58.761 37.037 0.00 0.00 44.05 4.12
618 3014 7.776745 AGTATAATAATACTCCCTCTGTCCCA 58.223 38.462 0.00 0.00 44.05 4.37
636 3032 7.011382 AGACAGAACCCTATTCGGAGTATAAT 58.989 38.462 0.00 0.00 33.16 1.28
666 3062 5.887598 TCCAGATTCCAATTCCAACTATGTG 59.112 40.000 0.00 0.00 0.00 3.21
667 3063 6.078456 TCCAGATTCCAATTCCAACTATGT 57.922 37.500 0.00 0.00 0.00 2.29
687 3090 2.425592 CAGTCCGTTGGTGCTCCA 59.574 61.111 2.64 2.64 42.66 3.86
694 3097 2.978010 GGGCACACAGTCCGTTGG 60.978 66.667 0.00 0.00 28.17 3.77
741 3152 5.011738 ACGAGATGAGTTGACCTAGGAAAAA 59.988 40.000 17.98 3.51 0.00 1.94
744 3155 3.698289 ACGAGATGAGTTGACCTAGGAA 58.302 45.455 17.98 0.00 0.00 3.36
745 3156 3.367646 ACGAGATGAGTTGACCTAGGA 57.632 47.619 17.98 0.00 0.00 2.94
746 3157 4.425520 GAAACGAGATGAGTTGACCTAGG 58.574 47.826 7.41 7.41 31.43 3.02
747 3158 4.082190 TGGAAACGAGATGAGTTGACCTAG 60.082 45.833 0.00 0.00 33.37 3.02
748 3159 3.830178 TGGAAACGAGATGAGTTGACCTA 59.170 43.478 0.00 0.00 33.37 3.08
749 3160 2.632996 TGGAAACGAGATGAGTTGACCT 59.367 45.455 0.00 0.00 33.37 3.85
750 3161 3.040147 TGGAAACGAGATGAGTTGACC 57.960 47.619 0.00 0.00 33.07 4.02
751 3162 4.058817 ACTTGGAAACGAGATGAGTTGAC 58.941 43.478 0.00 0.00 45.46 3.18
752 3163 4.336889 ACTTGGAAACGAGATGAGTTGA 57.663 40.909 0.00 0.00 45.46 3.18
753 3164 5.230942 AGTACTTGGAAACGAGATGAGTTG 58.769 41.667 0.00 0.00 45.46 3.16
754 3165 5.470047 AGTACTTGGAAACGAGATGAGTT 57.530 39.130 0.00 0.00 45.46 3.01
755 3166 4.082136 GGAGTACTTGGAAACGAGATGAGT 60.082 45.833 0.00 0.00 45.46 3.41
756 3167 4.425520 GGAGTACTTGGAAACGAGATGAG 58.574 47.826 0.00 0.00 45.46 2.90
757 3168 3.119602 CGGAGTACTTGGAAACGAGATGA 60.120 47.826 0.00 0.00 45.46 2.92
758 3169 3.179830 CGGAGTACTTGGAAACGAGATG 58.820 50.000 0.00 0.00 45.46 2.90
808 3227 2.104859 CGGCTCGTACGTCTCCTCA 61.105 63.158 16.05 0.00 0.00 3.86
827 3246 3.147595 CTCTGGATGTCGGGGCGA 61.148 66.667 0.00 0.00 0.00 5.54
963 3393 1.902918 GATTGCACCACCACCAGCA 60.903 57.895 0.00 0.00 34.79 4.41
964 3394 2.964978 GATTGCACCACCACCAGC 59.035 61.111 0.00 0.00 0.00 4.85
965 3395 0.321210 TACGATTGCACCACCACCAG 60.321 55.000 0.00 0.00 0.00 4.00
966 3396 0.321210 CTACGATTGCACCACCACCA 60.321 55.000 0.00 0.00 0.00 4.17
967 3397 0.321298 ACTACGATTGCACCACCACC 60.321 55.000 0.00 0.00 0.00 4.61
968 3398 1.196808 CAACTACGATTGCACCACCAC 59.803 52.381 0.00 0.00 0.00 4.16
1183 4618 4.713824 ATTTGCATCTCACCTTGACATG 57.286 40.909 0.00 0.00 0.00 3.21
1203 4645 1.800805 CCTTGTCGAGCACACTGAAT 58.199 50.000 0.00 0.00 33.41 2.57
1408 4851 7.908193 ACTGTCGTTTAAGCTTTGTAATTTG 57.092 32.000 3.20 0.00 0.00 2.32
1690 5137 0.977627 TCACGGGTGATCTGAGGCAT 60.978 55.000 0.00 0.00 34.14 4.40
1691 5138 1.191489 TTCACGGGTGATCTGAGGCA 61.191 55.000 1.83 0.00 39.64 4.75
1696 5292 2.274437 CATGTCTTCACGGGTGATCTG 58.726 52.381 1.83 0.00 39.64 2.90
1757 5758 3.371102 TCAGTTTCAACCTCTCGACAG 57.629 47.619 0.00 0.00 0.00 3.51
1859 5860 2.784347 AGCAAGCTTCCTTTAGTCCAC 58.216 47.619 0.00 0.00 0.00 4.02
1935 5936 2.936114 GCAACTGCTCTTGAGATGCTCT 60.936 50.000 1.30 0.00 36.56 4.09
1962 5963 2.641305 GCAATCAGCTCCTTGATGACT 58.359 47.619 8.61 0.00 44.39 3.41
2001 6002 2.973694 TATCCTTCGCCGCTTTTAGT 57.026 45.000 0.00 0.00 0.00 2.24
2095 6100 3.004002 CGAACATTCAGCCATACATGCAT 59.996 43.478 0.00 0.00 0.00 3.96
2096 6101 2.355444 CGAACATTCAGCCATACATGCA 59.645 45.455 0.00 0.00 0.00 3.96
2097 6102 2.855953 GCGAACATTCAGCCATACATGC 60.856 50.000 0.00 0.00 0.00 4.06
2098 6103 2.355444 TGCGAACATTCAGCCATACATG 59.645 45.455 0.00 0.00 0.00 3.21
2214 10073 9.877178 CAGTCCATAGAGACTAACTAAAACATT 57.123 33.333 0.00 0.00 45.38 2.71
2319 10178 8.677300 CAACATTAGTATTTTCAGTGCCTATGT 58.323 33.333 0.00 0.00 0.00 2.29
2447 10306 4.507710 TCTGAAAGTGCTAATGGCTACAG 58.492 43.478 0.00 0.00 42.39 2.74
2485 10344 2.035442 GGAGCACCGGAGCAGAAAC 61.035 63.158 26.04 10.79 36.85 2.78
2486 10345 2.347490 GGAGCACCGGAGCAGAAA 59.653 61.111 26.04 0.00 36.85 2.52
2487 10346 3.706373 GGGAGCACCGGAGCAGAA 61.706 66.667 26.04 0.00 36.85 3.02
2492 10351 4.787280 AGGAGGGGAGCACCGGAG 62.787 72.222 9.46 0.00 41.60 4.63
2504 10363 2.046892 CGTGTTCAGCCCAGGAGG 60.047 66.667 0.00 0.00 39.47 4.30
2505 10364 2.046892 CCGTGTTCAGCCCAGGAG 60.047 66.667 0.00 0.00 0.00 3.69
2506 10365 3.636231 CCCGTGTTCAGCCCAGGA 61.636 66.667 0.00 0.00 0.00 3.86
2507 10366 4.722700 CCCCGTGTTCAGCCCAGG 62.723 72.222 0.00 0.00 0.00 4.45
2508 10367 3.953775 ACCCCGTGTTCAGCCCAG 61.954 66.667 0.00 0.00 0.00 4.45
2509 10368 4.263572 CACCCCGTGTTCAGCCCA 62.264 66.667 0.00 0.00 0.00 5.36
2511 10370 2.969300 TTTCCACCCCGTGTTCAGCC 62.969 60.000 0.00 0.00 0.00 4.85
2512 10371 1.104577 TTTTCCACCCCGTGTTCAGC 61.105 55.000 0.00 0.00 0.00 4.26
2513 10372 0.666374 GTTTTCCACCCCGTGTTCAG 59.334 55.000 0.00 0.00 0.00 3.02
2514 10373 0.034380 TGTTTTCCACCCCGTGTTCA 60.034 50.000 0.00 0.00 0.00 3.18
2515 10374 0.382873 GTGTTTTCCACCCCGTGTTC 59.617 55.000 0.00 0.00 38.18 3.18
2516 10375 0.323542 TGTGTTTTCCACCCCGTGTT 60.324 50.000 0.00 0.00 43.85 3.32
2517 10376 0.106419 ATGTGTTTTCCACCCCGTGT 60.106 50.000 0.00 0.00 43.85 4.49
2518 10377 0.596082 GATGTGTTTTCCACCCCGTG 59.404 55.000 0.00 0.00 43.85 4.94
2519 10378 0.887387 CGATGTGTTTTCCACCCCGT 60.887 55.000 0.00 0.00 43.85 5.28
2520 10379 0.604243 TCGATGTGTTTTCCACCCCG 60.604 55.000 0.00 0.00 43.85 5.73
2521 10380 0.879090 GTCGATGTGTTTTCCACCCC 59.121 55.000 0.00 0.00 43.85 4.95
2522 10381 0.515564 CGTCGATGTGTTTTCCACCC 59.484 55.000 0.00 0.00 43.85 4.61
2523 10382 0.515564 CCGTCGATGTGTTTTCCACC 59.484 55.000 3.52 0.00 43.85 4.61
2524 10383 0.110373 GCCGTCGATGTGTTTTCCAC 60.110 55.000 3.52 0.00 44.78 4.02
2525 10384 1.231958 GGCCGTCGATGTGTTTTCCA 61.232 55.000 3.52 0.00 0.00 3.53
2526 10385 1.231958 TGGCCGTCGATGTGTTTTCC 61.232 55.000 3.52 0.00 0.00 3.13
2527 10386 0.165944 CTGGCCGTCGATGTGTTTTC 59.834 55.000 3.52 0.00 0.00 2.29
2528 10387 1.234615 CCTGGCCGTCGATGTGTTTT 61.235 55.000 3.52 0.00 0.00 2.43
2529 10388 1.671054 CCTGGCCGTCGATGTGTTT 60.671 57.895 3.52 0.00 0.00 2.83
2530 10389 1.899437 ATCCTGGCCGTCGATGTGTT 61.899 55.000 3.52 0.00 0.00 3.32
2531 10390 2.359169 ATCCTGGCCGTCGATGTGT 61.359 57.895 3.52 0.00 0.00 3.72
2532 10391 1.884464 CATCCTGGCCGTCGATGTG 60.884 63.158 15.11 0.00 30.86 3.21
2533 10392 1.613317 TTCATCCTGGCCGTCGATGT 61.613 55.000 20.04 0.00 35.83 3.06
2534 10393 1.143838 TTCATCCTGGCCGTCGATG 59.856 57.895 16.56 16.56 35.71 3.84
2535 10394 1.144057 GTTCATCCTGGCCGTCGAT 59.856 57.895 0.00 0.00 0.00 3.59
2536 10395 2.577059 GTTCATCCTGGCCGTCGA 59.423 61.111 0.00 0.00 0.00 4.20
2537 10396 2.511600 GGTTCATCCTGGCCGTCG 60.512 66.667 0.00 0.00 0.00 5.12
2538 10397 0.608035 TTTGGTTCATCCTGGCCGTC 60.608 55.000 0.00 0.00 37.07 4.79
2539 10398 0.178975 TTTTGGTTCATCCTGGCCGT 60.179 50.000 0.00 0.00 37.07 5.68
2540 10399 0.965439 TTTTTGGTTCATCCTGGCCG 59.035 50.000 0.00 0.00 37.07 6.13
2541 10400 1.336795 CGTTTTTGGTTCATCCTGGCC 60.337 52.381 0.00 0.00 37.07 5.36
2542 10401 1.336795 CCGTTTTTGGTTCATCCTGGC 60.337 52.381 0.00 0.00 37.07 4.85
2543 10402 1.960689 ACCGTTTTTGGTTCATCCTGG 59.039 47.619 0.00 0.00 39.99 4.45
2552 10411 3.251487 CCTCGTTATGAACCGTTTTTGGT 59.749 43.478 0.00 0.00 46.67 3.67
2553 10412 3.365565 CCCTCGTTATGAACCGTTTTTGG 60.366 47.826 0.00 0.00 0.00 3.28
2554 10413 3.365565 CCCCTCGTTATGAACCGTTTTTG 60.366 47.826 0.00 0.00 0.00 2.44
2555 10414 2.815503 CCCCTCGTTATGAACCGTTTTT 59.184 45.455 0.00 0.00 0.00 1.94
2556 10415 2.429478 CCCCTCGTTATGAACCGTTTT 58.571 47.619 0.00 0.00 0.00 2.43
2557 10416 1.947212 GCCCCTCGTTATGAACCGTTT 60.947 52.381 0.00 0.00 0.00 3.60
2558 10417 0.392060 GCCCCTCGTTATGAACCGTT 60.392 55.000 0.00 0.00 0.00 4.44
2559 10418 1.219935 GCCCCTCGTTATGAACCGT 59.780 57.895 0.00 0.00 0.00 4.83
2560 10419 1.087771 GTGCCCCTCGTTATGAACCG 61.088 60.000 0.00 0.00 0.00 4.44
2561 10420 1.087771 CGTGCCCCTCGTTATGAACC 61.088 60.000 0.00 0.00 0.00 3.62
2562 10421 1.087771 CCGTGCCCCTCGTTATGAAC 61.088 60.000 0.00 0.00 0.00 3.18
2563 10422 1.219664 CCGTGCCCCTCGTTATGAA 59.780 57.895 0.00 0.00 0.00 2.57
2564 10423 1.952102 GACCGTGCCCCTCGTTATGA 61.952 60.000 0.00 0.00 0.00 2.15
2565 10424 1.520787 GACCGTGCCCCTCGTTATG 60.521 63.158 0.00 0.00 0.00 1.90
2566 10425 2.897972 GACCGTGCCCCTCGTTAT 59.102 61.111 0.00 0.00 0.00 1.89
2567 10426 3.751246 CGACCGTGCCCCTCGTTA 61.751 66.667 0.00 0.00 0.00 3.18
2571 10430 3.236003 AAAGACGACCGTGCCCCTC 62.236 63.158 0.00 0.00 0.00 4.30
2572 10431 3.239253 AAAGACGACCGTGCCCCT 61.239 61.111 0.00 0.00 0.00 4.79
2573 10432 3.047877 CAAAGACGACCGTGCCCC 61.048 66.667 0.00 0.00 0.00 5.80
2574 10433 1.890510 AACAAAGACGACCGTGCCC 60.891 57.895 0.00 0.00 0.00 5.36
2575 10434 1.278637 CAACAAAGACGACCGTGCC 59.721 57.895 0.00 0.00 0.00 5.01
2576 10435 1.368850 GCAACAAAGACGACCGTGC 60.369 57.895 0.00 0.00 0.00 5.34
2577 10436 1.278637 GGCAACAAAGACGACCGTG 59.721 57.895 0.00 0.00 0.00 4.94
2578 10437 1.890510 GGGCAACAAAGACGACCGT 60.891 57.895 0.00 0.00 39.74 4.83
2579 10438 2.613506 GGGGCAACAAAGACGACCG 61.614 63.158 0.00 0.00 39.74 4.79
2580 10439 2.265904 GGGGGCAACAAAGACGACC 61.266 63.158 0.00 0.00 39.74 4.79
2581 10440 2.613506 CGGGGGCAACAAAGACGAC 61.614 63.158 0.00 0.00 39.74 4.34
2582 10441 2.281208 CGGGGGCAACAAAGACGA 60.281 61.111 0.00 0.00 39.74 4.20
2583 10442 2.593436 ACGGGGGCAACAAAGACG 60.593 61.111 0.00 0.00 39.74 4.18
2584 10443 0.535553 TACACGGGGGCAACAAAGAC 60.536 55.000 0.00 0.00 39.74 3.01
2585 10444 0.402504 ATACACGGGGGCAACAAAGA 59.597 50.000 0.00 0.00 39.74 2.52
2586 10445 2.014128 CTATACACGGGGGCAACAAAG 58.986 52.381 0.00 0.00 39.74 2.77
2587 10446 1.951424 GCTATACACGGGGGCAACAAA 60.951 52.381 0.00 0.00 39.74 2.83
2588 10447 0.393267 GCTATACACGGGGGCAACAA 60.393 55.000 0.00 0.00 39.74 2.83
2589 10448 1.222387 GCTATACACGGGGGCAACA 59.778 57.895 0.00 0.00 39.74 3.33
2590 10449 1.525306 GGCTATACACGGGGGCAAC 60.525 63.158 0.00 0.00 0.00 4.17
2591 10450 2.912714 GGCTATACACGGGGGCAA 59.087 61.111 0.00 0.00 0.00 4.52
2592 10451 3.542676 CGGCTATACACGGGGGCA 61.543 66.667 0.00 0.00 0.00 5.36
2593 10452 3.510679 GACGGCTATACACGGGGGC 62.511 68.421 0.00 0.00 0.00 5.80
2594 10453 2.732658 GACGGCTATACACGGGGG 59.267 66.667 0.00 0.00 0.00 5.40
2595 10454 2.126417 CTCGACGGCTATACACGGGG 62.126 65.000 0.00 0.00 0.00 5.73
2596 10455 1.281960 CTCGACGGCTATACACGGG 59.718 63.158 0.00 0.00 0.00 5.28
2597 10456 1.162181 TCCTCGACGGCTATACACGG 61.162 60.000 0.00 0.00 0.00 4.94
2598 10457 0.235144 CTCCTCGACGGCTATACACG 59.765 60.000 0.00 0.00 0.00 4.49
2599 10458 0.040246 GCTCCTCGACGGCTATACAC 60.040 60.000 0.00 0.00 0.00 2.90
2600 10459 1.170919 GGCTCCTCGACGGCTATACA 61.171 60.000 0.00 0.00 0.00 2.29
2601 10460 1.580437 GGCTCCTCGACGGCTATAC 59.420 63.158 0.00 0.00 0.00 1.47
2602 10461 1.602888 GGGCTCCTCGACGGCTATA 60.603 63.158 0.00 0.00 0.00 1.31
2603 10462 2.913060 GGGCTCCTCGACGGCTAT 60.913 66.667 0.00 0.00 0.00 2.97
2604 10463 4.124943 AGGGCTCCTCGACGGCTA 62.125 66.667 0.00 0.00 0.00 3.93
2609 10468 3.151022 CTCCCAGGGCTCCTCGAC 61.151 72.222 0.00 0.00 0.00 4.20
2610 10469 4.465446 CCTCCCAGGGCTCCTCGA 62.465 72.222 0.00 0.00 0.00 4.04
2630 10489 2.412037 GATCTAACCGGGCCCGTACG 62.412 65.000 40.52 28.35 37.81 3.67
2631 10490 1.365267 GATCTAACCGGGCCCGTAC 59.635 63.158 40.52 19.54 37.81 3.67
2632 10491 2.195567 CGATCTAACCGGGCCCGTA 61.196 63.158 40.52 26.69 37.81 4.02
2633 10492 2.909457 TACGATCTAACCGGGCCCGT 62.909 60.000 40.52 27.05 37.81 5.28
2634 10493 1.530013 ATACGATCTAACCGGGCCCG 61.530 60.000 37.99 37.99 39.44 6.13
2635 10494 0.037605 CATACGATCTAACCGGGCCC 60.038 60.000 13.57 13.57 0.00 5.80
2636 10495 0.669625 GCATACGATCTAACCGGGCC 60.670 60.000 6.32 0.00 0.00 5.80
2637 10496 0.669625 GGCATACGATCTAACCGGGC 60.670 60.000 6.32 0.00 0.00 6.13
2638 10497 0.037605 GGGCATACGATCTAACCGGG 60.038 60.000 6.32 0.00 0.00 5.73
2639 10498 0.388134 CGGGCATACGATCTAACCGG 60.388 60.000 0.00 0.00 36.45 5.28
2640 10499 0.388134 CCGGGCATACGATCTAACCG 60.388 60.000 0.00 0.00 39.54 4.44
2641 10500 0.669625 GCCGGGCATACGATCTAACC 60.670 60.000 15.62 0.00 35.47 2.85
2642 10501 0.669625 GGCCGGGCATACGATCTAAC 60.670 60.000 25.33 0.00 35.47 2.34
2643 10502 1.116536 TGGCCGGGCATACGATCTAA 61.117 55.000 29.27 0.00 35.47 2.10
2644 10503 0.902984 ATGGCCGGGCATACGATCTA 60.903 55.000 39.48 11.86 35.47 1.98
2645 10504 0.902984 TATGGCCGGGCATACGATCT 60.903 55.000 38.69 22.62 35.47 2.75
2646 10505 0.178068 ATATGGCCGGGCATACGATC 59.822 55.000 42.76 7.13 35.47 3.69
2647 10506 1.138266 GTATATGGCCGGGCATACGAT 59.862 52.381 42.76 32.76 35.47 3.73
2648 10507 0.533491 GTATATGGCCGGGCATACGA 59.467 55.000 42.76 32.54 35.47 3.43
2649 10508 0.804544 CGTATATGGCCGGGCATACG 60.805 60.000 42.76 39.33 39.93 3.06
2650 10509 0.248289 ACGTATATGGCCGGGCATAC 59.752 55.000 42.76 34.20 0.00 2.39
2651 10510 1.849977 TACGTATATGGCCGGGCATA 58.150 50.000 42.11 42.11 0.00 3.14
2652 10511 1.134521 CATACGTATATGGCCGGGCAT 60.135 52.381 40.84 40.84 35.45 4.40
2653 10512 0.248012 CATACGTATATGGCCGGGCA 59.752 55.000 34.65 34.65 35.45 5.36
2654 10513 1.087771 GCATACGTATATGGCCGGGC 61.088 60.000 23.42 23.42 38.97 6.13
2655 10514 3.059603 GCATACGTATATGGCCGGG 57.940 57.895 7.96 0.00 38.97 5.73
2667 10526 1.904144 CGTATATGGACGGGCATACG 58.096 55.000 0.00 0.00 39.93 3.06
2679 10538 7.889211 CGCCGTATACAAACAAATACGTATATG 59.111 37.037 8.83 6.16 45.90 1.78
2680 10539 7.062138 CCGCCGTATACAAACAAATACGTATAT 59.938 37.037 8.83 0.00 45.90 0.86
2681 10540 6.362016 CCGCCGTATACAAACAAATACGTATA 59.638 38.462 8.83 0.00 45.90 1.47
2682 10541 5.175491 CCGCCGTATACAAACAAATACGTAT 59.825 40.000 1.14 1.14 45.90 3.06
2683 10542 4.502282 CCGCCGTATACAAACAAATACGTA 59.498 41.667 12.29 0.00 45.90 3.57
2684 10543 3.306703 CCGCCGTATACAAACAAATACGT 59.693 43.478 12.29 0.00 45.90 3.57
2685 10544 3.842083 GCCGCCGTATACAAACAAATACG 60.842 47.826 3.32 7.67 46.55 3.06
2686 10545 3.546616 GGCCGCCGTATACAAACAAATAC 60.547 47.826 3.32 0.00 0.00 1.89
2687 10546 2.613133 GGCCGCCGTATACAAACAAATA 59.387 45.455 3.32 0.00 0.00 1.40
2688 10547 1.402613 GGCCGCCGTATACAAACAAAT 59.597 47.619 3.32 0.00 0.00 2.32
2689 10548 0.803740 GGCCGCCGTATACAAACAAA 59.196 50.000 3.32 0.00 0.00 2.83
2690 10549 0.036199 AGGCCGCCGTATACAAACAA 60.036 50.000 3.05 0.00 0.00 2.83
2691 10550 0.036199 AAGGCCGCCGTATACAAACA 60.036 50.000 3.05 0.00 0.00 2.83
2692 10551 1.063027 GAAAGGCCGCCGTATACAAAC 59.937 52.381 3.05 0.00 0.00 2.93
2693 10552 1.338864 TGAAAGGCCGCCGTATACAAA 60.339 47.619 3.05 0.00 0.00 2.83
2694 10553 0.249676 TGAAAGGCCGCCGTATACAA 59.750 50.000 3.05 0.00 0.00 2.41
2695 10554 0.466543 ATGAAAGGCCGCCGTATACA 59.533 50.000 3.05 3.24 0.00 2.29
2696 10555 0.865769 CATGAAAGGCCGCCGTATAC 59.134 55.000 3.05 0.00 0.00 1.47
2697 10556 0.882927 GCATGAAAGGCCGCCGTATA 60.883 55.000 3.05 0.00 37.93 1.47
2698 10557 2.186826 GCATGAAAGGCCGCCGTAT 61.187 57.895 3.05 0.00 37.93 3.06
2699 10558 2.822255 GCATGAAAGGCCGCCGTA 60.822 61.111 3.05 0.00 37.93 4.02
2707 10566 0.453282 CTTCACGCGTGCATGAAAGG 60.453 55.000 33.63 12.58 34.52 3.11
2708 10567 1.061799 GCTTCACGCGTGCATGAAAG 61.062 55.000 33.63 28.60 34.52 2.62
2709 10568 1.082169 GCTTCACGCGTGCATGAAA 60.082 52.632 33.63 20.68 34.52 2.69
2710 10569 2.555782 GCTTCACGCGTGCATGAA 59.444 55.556 33.63 21.05 33.82 2.57
2711 10570 3.422303 GGCTTCACGCGTGCATGA 61.422 61.111 33.63 14.65 40.44 3.07
2712 10571 4.799473 CGGCTTCACGCGTGCATG 62.799 66.667 33.63 24.13 40.44 4.06
2737 10596 4.927782 TGACACGTGCTGCCCCAC 62.928 66.667 17.22 0.00 0.00 4.61
2738 10597 4.927782 GTGACACGTGCTGCCCCA 62.928 66.667 17.22 1.39 0.00 4.96
2742 10601 3.851845 TACCCGTGACACGTGCTGC 62.852 63.158 25.18 6.07 40.58 5.25
2743 10602 1.733041 CTACCCGTGACACGTGCTG 60.733 63.158 25.18 13.43 40.58 4.41
2744 10603 1.741327 AACTACCCGTGACACGTGCT 61.741 55.000 25.18 10.31 40.58 4.40
2745 10604 1.300388 AACTACCCGTGACACGTGC 60.300 57.895 25.18 9.30 40.58 5.34
2746 10605 1.554042 GCAACTACCCGTGACACGTG 61.554 60.000 25.18 17.65 40.58 4.49
2747 10606 1.300388 GCAACTACCCGTGACACGT 60.300 57.895 25.18 11.45 40.58 4.49
2748 10607 2.025418 GGCAACTACCCGTGACACG 61.025 63.158 21.02 21.02 42.11 4.49
2749 10608 0.533308 TTGGCAACTACCCGTGACAC 60.533 55.000 0.00 0.00 37.61 3.67
2750 10609 0.180642 TTTGGCAACTACCCGTGACA 59.819 50.000 0.00 0.00 37.61 3.58
2751 10610 1.002142 GTTTTGGCAACTACCCGTGAC 60.002 52.381 0.00 0.00 37.61 3.67
2752 10611 1.134037 AGTTTTGGCAACTACCCGTGA 60.134 47.619 0.00 0.00 37.61 4.35
2753 10612 1.001815 CAGTTTTGGCAACTACCCGTG 60.002 52.381 0.00 0.00 37.61 4.94
2754 10613 1.314730 CAGTTTTGGCAACTACCCGT 58.685 50.000 0.00 0.00 37.61 5.28
2755 10614 1.265905 GACAGTTTTGGCAACTACCCG 59.734 52.381 0.00 0.00 37.61 5.28
2756 10615 1.611977 GGACAGTTTTGGCAACTACCC 59.388 52.381 0.00 0.00 32.23 3.69
2757 10616 1.611977 GGGACAGTTTTGGCAACTACC 59.388 52.381 0.00 3.04 32.23 3.18
2758 10617 2.303175 TGGGACAGTTTTGGCAACTAC 58.697 47.619 0.00 1.04 32.23 2.73
2759 10618 2.738587 TGGGACAGTTTTGGCAACTA 57.261 45.000 0.00 0.00 32.23 2.24
2760 10619 3.605946 TGGGACAGTTTTGGCAACT 57.394 47.368 0.00 0.00 32.23 3.16
2764 10623 7.417797 ACATTTATATGATGGGACAGTTTTGGC 60.418 37.037 0.00 0.00 37.13 4.52
2765 10624 7.922278 CACATTTATATGATGGGACAGTTTTGG 59.078 37.037 0.00 0.00 37.13 3.28
2766 10625 7.922278 CCACATTTATATGATGGGACAGTTTTG 59.078 37.037 0.00 0.00 37.13 2.44
2767 10626 7.838696 TCCACATTTATATGATGGGACAGTTTT 59.161 33.333 0.00 0.00 37.13 2.43
2768 10627 7.285401 GTCCACATTTATATGATGGGACAGTTT 59.715 37.037 20.07 0.00 42.98 2.66
2769 10628 6.772716 GTCCACATTTATATGATGGGACAGTT 59.227 38.462 20.07 0.00 42.98 3.16
2770 10629 6.299141 GTCCACATTTATATGATGGGACAGT 58.701 40.000 20.07 0.00 42.98 3.55
2771 10630 5.409520 CGTCCACATTTATATGATGGGACAG 59.590 44.000 22.28 16.05 43.26 3.51
2772 10631 5.304778 CGTCCACATTTATATGATGGGACA 58.695 41.667 22.28 6.56 43.26 4.02
2773 10632 4.695455 CCGTCCACATTTATATGATGGGAC 59.305 45.833 17.49 17.49 41.73 4.46
2774 10633 4.805947 GCCGTCCACATTTATATGATGGGA 60.806 45.833 0.00 1.94 35.46 4.37
2775 10634 3.440173 GCCGTCCACATTTATATGATGGG 59.560 47.826 0.00 2.21 35.46 4.00
2776 10635 4.071423 TGCCGTCCACATTTATATGATGG 58.929 43.478 0.00 4.73 35.77 3.51
2777 10636 5.451908 GTTGCCGTCCACATTTATATGATG 58.548 41.667 0.00 0.00 35.65 3.07
2778 10637 4.518970 GGTTGCCGTCCACATTTATATGAT 59.481 41.667 0.00 0.00 35.65 2.45
2779 10638 3.880490 GGTTGCCGTCCACATTTATATGA 59.120 43.478 0.00 0.00 35.65 2.15
2780 10639 3.629855 TGGTTGCCGTCCACATTTATATG 59.370 43.478 0.00 0.00 37.79 1.78
2781 10640 3.892284 TGGTTGCCGTCCACATTTATAT 58.108 40.909 0.00 0.00 0.00 0.86
2782 10641 3.351794 TGGTTGCCGTCCACATTTATA 57.648 42.857 0.00 0.00 0.00 0.98
2783 10642 2.208132 TGGTTGCCGTCCACATTTAT 57.792 45.000 0.00 0.00 0.00 1.40
2784 10643 3.727738 TGGTTGCCGTCCACATTTA 57.272 47.368 0.00 0.00 0.00 1.40
2785 10644 4.589046 TGGTTGCCGTCCACATTT 57.411 50.000 0.00 0.00 0.00 2.32
2790 10649 3.948719 GGAGGTGGTTGCCGTCCA 61.949 66.667 0.00 0.00 0.00 4.02
2810 10669 3.124798 GAAATGGTGGGCGATGCGG 62.125 63.158 0.00 0.00 0.00 5.69
2811 10670 2.408835 GAAATGGTGGGCGATGCG 59.591 61.111 0.00 0.00 0.00 4.73
2812 10671 2.785425 GGGAAATGGTGGGCGATGC 61.785 63.158 0.00 0.00 0.00 3.91
2813 10672 2.127232 GGGGAAATGGTGGGCGATG 61.127 63.158 0.00 0.00 0.00 3.84
2814 10673 2.278738 GGGGAAATGGTGGGCGAT 59.721 61.111 0.00 0.00 0.00 4.58
2815 10674 4.055227 GGGGGAAATGGTGGGCGA 62.055 66.667 0.00 0.00 0.00 5.54
2833 10692 4.933064 GAGGGAGACGATGCGGCG 62.933 72.222 0.51 0.51 41.28 6.46
2834 10693 3.492311 GAGAGGGAGACGATGCGGC 62.492 68.421 0.00 0.00 33.59 6.53
2835 10694 1.791103 GAGAGAGGGAGACGATGCGG 61.791 65.000 0.00 0.00 0.00 5.69
2836 10695 1.652012 GAGAGAGGGAGACGATGCG 59.348 63.158 0.00 0.00 0.00 4.73
2837 10696 0.753479 TGGAGAGAGGGAGACGATGC 60.753 60.000 0.00 0.00 0.00 3.91
2838 10697 1.028905 GTGGAGAGAGGGAGACGATG 58.971 60.000 0.00 0.00 0.00 3.84
2839 10698 0.923358 AGTGGAGAGAGGGAGACGAT 59.077 55.000 0.00 0.00 0.00 3.73
2840 10699 0.253610 GAGTGGAGAGAGGGAGACGA 59.746 60.000 0.00 0.00 0.00 4.20
2841 10700 0.750182 GGAGTGGAGAGAGGGAGACG 60.750 65.000 0.00 0.00 0.00 4.18
2842 10701 0.396556 GGGAGTGGAGAGAGGGAGAC 60.397 65.000 0.00 0.00 0.00 3.36
2843 10702 1.585651 GGGGAGTGGAGAGAGGGAGA 61.586 65.000 0.00 0.00 0.00 3.71
2844 10703 1.075600 GGGGAGTGGAGAGAGGGAG 60.076 68.421 0.00 0.00 0.00 4.30
2845 10704 1.862138 TGGGGAGTGGAGAGAGGGA 60.862 63.158 0.00 0.00 0.00 4.20
2846 10705 1.687493 GTGGGGAGTGGAGAGAGGG 60.687 68.421 0.00 0.00 0.00 4.30
2847 10706 0.686112 GAGTGGGGAGTGGAGAGAGG 60.686 65.000 0.00 0.00 0.00 3.69
2848 10707 0.686112 GGAGTGGGGAGTGGAGAGAG 60.686 65.000 0.00 0.00 0.00 3.20
2849 10708 1.388531 GGAGTGGGGAGTGGAGAGA 59.611 63.158 0.00 0.00 0.00 3.10
2850 10709 1.687493 GGGAGTGGGGAGTGGAGAG 60.687 68.421 0.00 0.00 0.00 3.20
2851 10710 2.450243 GGGAGTGGGGAGTGGAGA 59.550 66.667 0.00 0.00 0.00 3.71
2852 10711 2.689034 GGGGAGTGGGGAGTGGAG 60.689 72.222 0.00 0.00 0.00 3.86
2853 10712 3.537506 TGGGGAGTGGGGAGTGGA 61.538 66.667 0.00 0.00 0.00 4.02
2854 10713 3.330720 GTGGGGAGTGGGGAGTGG 61.331 72.222 0.00 0.00 0.00 4.00
2855 10714 1.842381 GAAGTGGGGAGTGGGGAGTG 61.842 65.000 0.00 0.00 0.00 3.51
2856 10715 1.539124 GAAGTGGGGAGTGGGGAGT 60.539 63.158 0.00 0.00 0.00 3.85
2857 10716 2.301738 GGAAGTGGGGAGTGGGGAG 61.302 68.421 0.00 0.00 0.00 4.30
2858 10717 2.204090 GGAAGTGGGGAGTGGGGA 60.204 66.667 0.00 0.00 0.00 4.81
2859 10718 2.204151 AGGAAGTGGGGAGTGGGG 60.204 66.667 0.00 0.00 0.00 4.96
2860 10719 1.229658 AGAGGAAGTGGGGAGTGGG 60.230 63.158 0.00 0.00 0.00 4.61
2861 10720 1.268283 GGAGAGGAAGTGGGGAGTGG 61.268 65.000 0.00 0.00 0.00 4.00
2862 10721 0.252467 AGGAGAGGAAGTGGGGAGTG 60.252 60.000 0.00 0.00 0.00 3.51
2863 10722 0.041982 GAGGAGAGGAAGTGGGGAGT 59.958 60.000 0.00 0.00 0.00 3.85
2864 10723 0.338120 AGAGGAGAGGAAGTGGGGAG 59.662 60.000 0.00 0.00 0.00 4.30
2865 10724 0.336737 GAGAGGAGAGGAAGTGGGGA 59.663 60.000 0.00 0.00 0.00 4.81
2866 10725 0.689412 GGAGAGGAGAGGAAGTGGGG 60.689 65.000 0.00 0.00 0.00 4.96
2867 10726 0.041833 TGGAGAGGAGAGGAAGTGGG 59.958 60.000 0.00 0.00 0.00 4.61
2868 10727 1.552792 GTTGGAGAGGAGAGGAAGTGG 59.447 57.143 0.00 0.00 0.00 4.00
2869 10728 1.552792 GGTTGGAGAGGAGAGGAAGTG 59.447 57.143 0.00 0.00 0.00 3.16
2870 10729 1.435168 AGGTTGGAGAGGAGAGGAAGT 59.565 52.381 0.00 0.00 0.00 3.01
2871 10730 2.107366 GAGGTTGGAGAGGAGAGGAAG 58.893 57.143 0.00 0.00 0.00 3.46
2872 10731 1.273324 GGAGGTTGGAGAGGAGAGGAA 60.273 57.143 0.00 0.00 0.00 3.36
2873 10732 0.336737 GGAGGTTGGAGAGGAGAGGA 59.663 60.000 0.00 0.00 0.00 3.71
2874 10733 0.338120 AGGAGGTTGGAGAGGAGAGG 59.662 60.000 0.00 0.00 0.00 3.69
2875 10734 1.775385 GAGGAGGTTGGAGAGGAGAG 58.225 60.000 0.00 0.00 0.00 3.20
2876 10735 0.033991 CGAGGAGGTTGGAGAGGAGA 60.034 60.000 0.00 0.00 0.00 3.71
2877 10736 0.323908 ACGAGGAGGTTGGAGAGGAG 60.324 60.000 0.00 0.00 0.00 3.69
2878 10737 0.323542 GACGAGGAGGTTGGAGAGGA 60.324 60.000 0.00 0.00 0.00 3.71
2879 10738 0.323908 AGACGAGGAGGTTGGAGAGG 60.324 60.000 0.00 0.00 0.00 3.69
2880 10739 1.099689 GAGACGAGGAGGTTGGAGAG 58.900 60.000 0.00 0.00 0.00 3.20
2881 10740 0.323542 GGAGACGAGGAGGTTGGAGA 60.324 60.000 0.00 0.00 0.00 3.71
2882 10741 1.324005 GGGAGACGAGGAGGTTGGAG 61.324 65.000 0.00 0.00 0.00 3.86
2883 10742 1.305046 GGGAGACGAGGAGGTTGGA 60.305 63.158 0.00 0.00 0.00 3.53
2884 10743 1.305381 AGGGAGACGAGGAGGTTGG 60.305 63.158 0.00 0.00 0.00 3.77
2885 10744 0.612174 TGAGGGAGACGAGGAGGTTG 60.612 60.000 0.00 0.00 0.00 3.77
2886 10745 0.612453 GTGAGGGAGACGAGGAGGTT 60.612 60.000 0.00 0.00 0.00 3.50
2887 10746 1.000646 GTGAGGGAGACGAGGAGGT 60.001 63.158 0.00 0.00 0.00 3.85
2888 10747 1.755008 GGTGAGGGAGACGAGGAGG 60.755 68.421 0.00 0.00 0.00 4.30
2889 10748 2.115911 CGGTGAGGGAGACGAGGAG 61.116 68.421 0.00 0.00 0.00 3.69
2890 10749 2.045242 CGGTGAGGGAGACGAGGA 60.045 66.667 0.00 0.00 0.00 3.71
2891 10750 3.827898 GCGGTGAGGGAGACGAGG 61.828 72.222 0.00 0.00 0.00 4.63
2892 10751 2.343163 GATGCGGTGAGGGAGACGAG 62.343 65.000 0.00 0.00 0.00 4.18
2893 10752 2.362503 ATGCGGTGAGGGAGACGA 60.363 61.111 0.00 0.00 0.00 4.20
2894 10753 2.105128 GATGCGGTGAGGGAGACG 59.895 66.667 0.00 0.00 0.00 4.18
2895 10754 2.022240 GAGGATGCGGTGAGGGAGAC 62.022 65.000 0.00 0.00 0.00 3.36
2896 10755 1.758514 GAGGATGCGGTGAGGGAGA 60.759 63.158 0.00 0.00 0.00 3.71
2897 10756 1.743321 GAGAGGATGCGGTGAGGGAG 61.743 65.000 0.00 0.00 0.00 4.30
2898 10757 1.758514 GAGAGGATGCGGTGAGGGA 60.759 63.158 0.00 0.00 0.00 4.20
2899 10758 2.801631 GGAGAGGATGCGGTGAGGG 61.802 68.421 0.00 0.00 0.00 4.30
2900 10759 1.406065 ATGGAGAGGATGCGGTGAGG 61.406 60.000 0.00 0.00 0.00 3.86
2901 10760 0.033228 GATGGAGAGGATGCGGTGAG 59.967 60.000 0.00 0.00 0.00 3.51
2902 10761 1.738346 CGATGGAGAGGATGCGGTGA 61.738 60.000 0.00 0.00 0.00 4.02
2903 10762 1.300465 CGATGGAGAGGATGCGGTG 60.300 63.158 0.00 0.00 0.00 4.94
2904 10763 3.133014 CGATGGAGAGGATGCGGT 58.867 61.111 0.00 0.00 0.00 5.68
2905 10764 2.356793 GCGATGGAGAGGATGCGG 60.357 66.667 0.00 0.00 0.00 5.69
2906 10765 2.356793 GGCGATGGAGAGGATGCG 60.357 66.667 0.00 0.00 0.00 4.73
2907 10766 0.954449 CATGGCGATGGAGAGGATGC 60.954 60.000 0.00 0.00 0.00 3.91
2908 10767 3.228499 CATGGCGATGGAGAGGATG 57.772 57.895 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.