Multiple sequence alignment - TraesCS7A01G124900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G124900 chr7A 100.000 2225 0 0 1 2225 80548632 80546408 0.000000e+00 4109.0
1 TraesCS7A01G124900 chr7A 89.694 1407 108 14 381 1758 125915214 125913816 0.000000e+00 1760.0
2 TraesCS7A01G124900 chr7A 97.577 454 10 1 1772 2225 47373571 47374023 0.000000e+00 776.0
3 TraesCS7A01G124900 chr7A 97.566 452 11 0 1774 2225 731563252 731563703 0.000000e+00 774.0
4 TraesCS7A01G124900 chr2A 89.709 1409 102 13 381 1759 12203908 12202513 0.000000e+00 1759.0
5 TraesCS7A01G124900 chr2A 98.018 454 8 1 1772 2225 752305641 752306093 0.000000e+00 787.0
6 TraesCS7A01G124900 chr2A 97.788 452 10 0 1774 2225 79464352 79464803 0.000000e+00 780.0
7 TraesCS7A01G124900 chr6B 89.124 1416 105 13 380 1760 141659523 141660924 0.000000e+00 1716.0
8 TraesCS7A01G124900 chr6B 81.707 328 40 10 692 1019 705934902 705935209 2.840000e-64 255.0
9 TraesCS7A01G124900 chr1B 85.601 1007 104 14 780 1759 645375653 645374661 0.000000e+00 1018.0
10 TraesCS7A01G124900 chr1B 87.042 409 50 2 382 787 645376019 645375611 2.010000e-125 459.0
11 TraesCS7A01G124900 chr1B 81.749 263 38 2 1511 1764 571365019 571364758 6.220000e-51 211.0
12 TraesCS7A01G124900 chr5A 98.009 452 8 1 1774 2225 47961675 47961225 0.000000e+00 784.0
13 TraesCS7A01G124900 chr1A 98.009 452 8 1 1774 2225 534870087 534869637 0.000000e+00 784.0
14 TraesCS7A01G124900 chr1A 97.788 452 10 0 1774 2225 278675076 278675527 0.000000e+00 780.0
15 TraesCS7A01G124900 chr1A 97.363 455 11 1 1771 2225 405641877 405642330 0.000000e+00 773.0
16 TraesCS7A01G124900 chr1A 80.751 213 31 3 1556 1759 42435955 42436166 8.230000e-35 158.0
17 TraesCS7A01G124900 chr4A 97.788 452 8 2 1774 2225 13247799 13248248 0.000000e+00 778.0
18 TraesCS7A01G124900 chr4A 84.793 651 84 11 783 1424 586429267 586428623 6.700000e-180 640.0
19 TraesCS7A01G124900 chr4A 96.000 250 10 0 1 250 327617411 327617660 7.400000e-110 407.0
20 TraesCS7A01G124900 chr4A 96.356 247 9 0 4 250 327654707 327654461 7.400000e-110 407.0
21 TraesCS7A01G124900 chr4A 95.951 247 10 0 4 250 327619015 327618769 3.440000e-108 401.0
22 TraesCS7A01G124900 chr4A 95.600 250 10 1 1 250 327609341 327609589 1.240000e-107 399.0
23 TraesCS7A01G124900 chr4A 86.817 311 32 7 384 690 294299688 294299383 2.740000e-89 339.0
24 TraesCS7A01G124900 chr4A 81.311 305 27 9 1463 1757 294298590 294298306 1.030000e-53 220.0
25 TraesCS7A01G124900 chr4A 91.667 96 8 0 692 787 586429324 586429229 1.390000e-27 134.0
26 TraesCS7A01G124900 chr4A 84.483 116 17 1 1645 1760 12188439 12188553 1.810000e-21 113.0
27 TraesCS7A01G124900 chr4D 85.714 728 77 13 710 1430 14998513 14999220 0.000000e+00 743.0
28 TraesCS7A01G124900 chr4D 77.049 183 32 5 1586 1759 480844239 480844058 1.820000e-16 97.1
29 TraesCS7A01G124900 chr6D 84.692 503 68 7 783 1279 426045424 426045923 5.520000e-136 494.0
30 TraesCS7A01G124900 chr6D 83.333 120 15 2 1514 1632 91556780 91556895 3.020000e-19 106.0
31 TraesCS7A01G124900 chr7D 90.852 317 28 1 381 697 84325794 84325479 7.340000e-115 424.0
32 TraesCS7A01G124900 chr7D 88.562 306 25 2 1463 1759 84324723 84324419 1.620000e-96 363.0
33 TraesCS7A01G124900 chr2B 79.454 623 104 13 803 1423 90056666 90056066 9.500000e-114 420.0
34 TraesCS7A01G124900 chr2B 95.200 250 12 0 1 250 791902378 791902627 1.600000e-106 396.0
35 TraesCS7A01G124900 chr2B 88.125 320 31 3 380 697 210826375 210826061 7.500000e-100 374.0
36 TraesCS7A01G124900 chr2B 82.946 258 34 2 1511 1759 159251917 159251661 8.000000e-55 224.0
37 TraesCS7A01G124900 chr4B 95.951 247 10 0 4 250 647019051 647019297 3.440000e-108 401.0
38 TraesCS7A01G124900 chr4B 95.600 250 11 0 1 250 647028001 647028250 3.440000e-108 401.0
39 TraesCS7A01G124900 chr7B 95.200 250 12 0 1 250 368086375 368086624 1.600000e-106 396.0
40 TraesCS7A01G124900 chr7B 87.220 313 38 1 380 690 143250427 143250739 2.720000e-94 355.0
41 TraesCS7A01G124900 chr7B 86.441 295 26 5 1463 1748 143251481 143251770 5.970000e-81 311.0
42 TraesCS7A01G124900 chr7B 82.292 288 38 7 1485 1761 179901110 179901395 1.030000e-58 237.0
43 TraesCS7A01G124900 chr7B 82.812 256 33 7 1515 1761 579413495 579413748 3.720000e-53 219.0
44 TraesCS7A01G124900 chrUn 94.800 250 13 0 1 250 277559276 277559525 7.450000e-105 390.0
45 TraesCS7A01G124900 chrUn 87.539 321 34 4 381 697 110693090 110693408 1.260000e-97 366.0
46 TraesCS7A01G124900 chr5B 78.871 549 92 13 803 1349 87761912 87761386 1.260000e-92 350.0
47 TraesCS7A01G124900 chr5B 84.158 303 34 4 1466 1759 335951908 335951611 4.680000e-72 281.0
48 TraesCS7A01G124900 chr5D 84.436 257 30 7 1511 1758 486452836 486452581 6.140000e-61 244.0
49 TraesCS7A01G124900 chr5D 76.655 287 54 8 1485 1760 34042716 34043000 1.780000e-31 147.0
50 TraesCS7A01G124900 chr3A 82.061 262 35 7 1514 1765 501935409 501935150 1.730000e-51 213.0
51 TraesCS7A01G124900 chr3A 81.659 229 32 5 1540 1759 695752337 695752110 4.880000e-42 182.0
52 TraesCS7A01G124900 chr3D 81.132 265 35 9 1514 1765 377889609 377889347 4.850000e-47 198.0
53 TraesCS7A01G124900 chr2D 80.081 246 39 5 1523 1759 45100328 45100572 8.170000e-40 174.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G124900 chr7A 80546408 80548632 2224 True 4109.0 4109 100.0000 1 2225 1 chr7A.!!$R1 2224
1 TraesCS7A01G124900 chr7A 125913816 125915214 1398 True 1760.0 1760 89.6940 381 1758 1 chr7A.!!$R2 1377
2 TraesCS7A01G124900 chr2A 12202513 12203908 1395 True 1759.0 1759 89.7090 381 1759 1 chr2A.!!$R1 1378
3 TraesCS7A01G124900 chr6B 141659523 141660924 1401 False 1716.0 1716 89.1240 380 1760 1 chr6B.!!$F1 1380
4 TraesCS7A01G124900 chr1B 645374661 645376019 1358 True 738.5 1018 86.3215 382 1759 2 chr1B.!!$R2 1377
5 TraesCS7A01G124900 chr4A 586428623 586429324 701 True 387.0 640 88.2300 692 1424 2 chr4A.!!$R4 732
6 TraesCS7A01G124900 chr4A 294298306 294299688 1382 True 279.5 339 84.0640 384 1757 2 chr4A.!!$R3 1373
7 TraesCS7A01G124900 chr4D 14998513 14999220 707 False 743.0 743 85.7140 710 1430 1 chr4D.!!$F1 720
8 TraesCS7A01G124900 chr7D 84324419 84325794 1375 True 393.5 424 89.7070 381 1759 2 chr7D.!!$R1 1378
9 TraesCS7A01G124900 chr2B 90056066 90056666 600 True 420.0 420 79.4540 803 1423 1 chr2B.!!$R1 620
10 TraesCS7A01G124900 chr7B 143250427 143251770 1343 False 333.0 355 86.8305 380 1748 2 chr7B.!!$F4 1368
11 TraesCS7A01G124900 chr5B 87761386 87761912 526 True 350.0 350 78.8710 803 1349 1 chr5B.!!$R1 546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
828 915 0.189327 ATCATCTTCCCCCAATGCCC 59.811 55.0 0.0 0.0 0.0 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1802 2468 0.030235 GGGGGCGATTTTTATGCGTC 59.97 55.0 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.770010 ACCCGTCCCATAAATTCATAAATAAA 57.230 30.769 0.00 0.00 0.00 1.40
26 27 9.203163 ACCCGTCCCATAAATTCATAAATAAAA 57.797 29.630 0.00 0.00 0.00 1.52
27 28 9.691362 CCCGTCCCATAAATTCATAAATAAAAG 57.309 33.333 0.00 0.00 0.00 2.27
28 29 9.191995 CCGTCCCATAAATTCATAAATAAAAGC 57.808 33.333 0.00 0.00 0.00 3.51
29 30 9.743057 CGTCCCATAAATTCATAAATAAAAGCA 57.257 29.630 0.00 0.00 0.00 3.91
42 43 9.853555 CATAAATAAAAGCACTATGTGAAACCA 57.146 29.630 1.52 0.00 35.23 3.67
44 45 8.816640 AAATAAAAGCACTATGTGAAACCAAG 57.183 30.769 1.52 0.00 35.23 3.61
45 46 7.759489 ATAAAAGCACTATGTGAAACCAAGA 57.241 32.000 1.52 0.00 35.23 3.02
46 47 6.463995 AAAAGCACTATGTGAAACCAAGAA 57.536 33.333 1.52 0.00 35.23 2.52
47 48 6.463995 AAAGCACTATGTGAAACCAAGAAA 57.536 33.333 1.52 0.00 35.23 2.52
48 49 5.438761 AGCACTATGTGAAACCAAGAAAC 57.561 39.130 1.52 0.00 35.23 2.78
49 50 5.133221 AGCACTATGTGAAACCAAGAAACT 58.867 37.500 1.52 0.00 35.23 2.66
50 51 6.296026 AGCACTATGTGAAACCAAGAAACTA 58.704 36.000 1.52 0.00 35.23 2.24
51 52 6.204882 AGCACTATGTGAAACCAAGAAACTAC 59.795 38.462 1.52 0.00 35.23 2.73
52 53 6.017440 GCACTATGTGAAACCAAGAAACTACA 60.017 38.462 1.52 0.00 35.23 2.74
53 54 7.308589 GCACTATGTGAAACCAAGAAACTACAT 60.309 37.037 1.52 0.00 35.23 2.29
54 55 8.567948 CACTATGTGAAACCAAGAAACTACATT 58.432 33.333 0.00 0.00 35.23 2.71
55 56 9.787435 ACTATGTGAAACCAAGAAACTACATTA 57.213 29.630 0.00 0.00 34.36 1.90
59 60 9.959749 TGTGAAACCAAGAAACTACATTATTTC 57.040 29.630 0.00 0.00 34.36 2.17
60 61 9.959749 GTGAAACCAAGAAACTACATTATTTCA 57.040 29.630 0.00 0.00 37.30 2.69
65 66 9.744468 ACCAAGAAACTACATTATTTCAACAAC 57.256 29.630 0.00 0.00 37.30 3.32
66 67 9.743057 CCAAGAAACTACATTATTTCAACAACA 57.257 29.630 0.00 0.00 37.30 3.33
87 88 8.745590 ACAACATAAGTTACATATGGTTTTCCC 58.254 33.333 11.49 0.00 36.11 3.97
88 89 8.966868 CAACATAAGTTACATATGGTTTTCCCT 58.033 33.333 11.49 0.00 36.11 4.20
89 90 9.541884 AACATAAGTTACATATGGTTTTCCCTT 57.458 29.630 11.49 2.24 36.11 3.95
90 91 9.541884 ACATAAGTTACATATGGTTTTCCCTTT 57.458 29.630 11.49 0.00 39.73 3.11
92 93 6.753107 AGTTACATATGGTTTTCCCTTTCG 57.247 37.500 7.80 0.00 39.73 3.46
93 94 5.650703 AGTTACATATGGTTTTCCCTTTCGG 59.349 40.000 7.80 0.00 39.73 4.30
123 124 4.181578 CGAAGGGATTACACACAACTAGG 58.818 47.826 0.00 0.00 0.00 3.02
124 125 4.081862 CGAAGGGATTACACACAACTAGGA 60.082 45.833 0.00 0.00 0.00 2.94
125 126 5.568023 CGAAGGGATTACACACAACTAGGAA 60.568 44.000 0.00 0.00 0.00 3.36
126 127 5.836024 AGGGATTACACACAACTAGGAAA 57.164 39.130 0.00 0.00 0.00 3.13
127 128 6.388619 AGGGATTACACACAACTAGGAAAT 57.611 37.500 0.00 0.00 0.00 2.17
128 129 6.790319 AGGGATTACACACAACTAGGAAATT 58.210 36.000 0.00 0.00 0.00 1.82
129 130 7.924541 AGGGATTACACACAACTAGGAAATTA 58.075 34.615 0.00 0.00 0.00 1.40
130 131 7.827729 AGGGATTACACACAACTAGGAAATTAC 59.172 37.037 0.00 0.00 0.00 1.89
131 132 7.066645 GGGATTACACACAACTAGGAAATTACC 59.933 40.741 0.00 0.00 0.00 2.85
132 133 7.827729 GGATTACACACAACTAGGAAATTACCT 59.172 37.037 0.00 0.00 43.32 3.08
133 134 9.227777 GATTACACACAACTAGGAAATTACCTT 57.772 33.333 0.00 0.00 41.00 3.50
134 135 8.611654 TTACACACAACTAGGAAATTACCTTC 57.388 34.615 0.00 0.00 41.00 3.46
135 136 6.597562 ACACACAACTAGGAAATTACCTTCA 58.402 36.000 0.00 0.00 41.00 3.02
136 137 7.057894 ACACACAACTAGGAAATTACCTTCAA 58.942 34.615 0.00 0.00 41.00 2.69
137 138 7.558444 ACACACAACTAGGAAATTACCTTCAAA 59.442 33.333 0.00 0.00 41.00 2.69
138 139 7.860872 CACACAACTAGGAAATTACCTTCAAAC 59.139 37.037 0.00 0.00 41.00 2.93
139 140 7.778382 ACACAACTAGGAAATTACCTTCAAACT 59.222 33.333 0.00 0.00 41.00 2.66
140 141 8.290325 CACAACTAGGAAATTACCTTCAAACTC 58.710 37.037 0.00 0.00 41.00 3.01
141 142 8.218488 ACAACTAGGAAATTACCTTCAAACTCT 58.782 33.333 0.00 0.00 41.00 3.24
142 143 9.067986 CAACTAGGAAATTACCTTCAAACTCTT 57.932 33.333 0.00 0.00 41.00 2.85
143 144 8.622948 ACTAGGAAATTACCTTCAAACTCTTG 57.377 34.615 0.00 0.00 41.00 3.02
144 145 6.901081 AGGAAATTACCTTCAAACTCTTGG 57.099 37.500 0.00 0.00 36.86 3.61
145 146 5.243954 AGGAAATTACCTTCAAACTCTTGGC 59.756 40.000 0.00 0.00 36.86 4.52
146 147 4.766404 AATTACCTTCAAACTCTTGGCG 57.234 40.909 0.00 0.00 33.01 5.69
147 148 3.478857 TTACCTTCAAACTCTTGGCGA 57.521 42.857 0.00 0.00 33.01 5.54
148 149 2.341846 ACCTTCAAACTCTTGGCGAA 57.658 45.000 0.00 0.00 33.01 4.70
149 150 1.947456 ACCTTCAAACTCTTGGCGAAC 59.053 47.619 0.00 0.00 33.01 3.95
150 151 2.222027 CCTTCAAACTCTTGGCGAACT 58.778 47.619 0.00 0.00 33.01 3.01
151 152 3.181458 ACCTTCAAACTCTTGGCGAACTA 60.181 43.478 0.00 0.00 33.01 2.24
152 153 3.813166 CCTTCAAACTCTTGGCGAACTAA 59.187 43.478 0.00 0.00 33.01 2.24
153 154 4.083802 CCTTCAAACTCTTGGCGAACTAAG 60.084 45.833 0.00 0.00 33.01 2.18
154 155 2.806244 TCAAACTCTTGGCGAACTAAGC 59.194 45.455 0.00 0.00 33.01 3.09
155 156 1.429463 AACTCTTGGCGAACTAAGCG 58.571 50.000 0.00 0.00 35.00 4.68
164 165 0.721718 CGAACTAAGCGCCTTCTTGG 59.278 55.000 2.29 0.00 39.35 3.61
178 179 5.537300 CCTTCTTGGCTATTCTACTAGCA 57.463 43.478 5.55 0.00 44.84 3.49
179 180 5.537188 CCTTCTTGGCTATTCTACTAGCAG 58.463 45.833 5.55 0.00 44.84 4.24
180 181 5.069781 CCTTCTTGGCTATTCTACTAGCAGT 59.930 44.000 5.55 0.00 44.84 4.40
181 182 6.407525 CCTTCTTGGCTATTCTACTAGCAGTT 60.408 42.308 5.55 0.00 44.84 3.16
182 183 5.907207 TCTTGGCTATTCTACTAGCAGTTG 58.093 41.667 5.55 0.00 44.84 3.16
183 184 5.422331 TCTTGGCTATTCTACTAGCAGTTGT 59.578 40.000 5.55 0.00 44.84 3.32
184 185 5.011090 TGGCTATTCTACTAGCAGTTGTG 57.989 43.478 5.55 0.00 44.84 3.33
185 186 4.141937 TGGCTATTCTACTAGCAGTTGTGG 60.142 45.833 5.55 0.00 44.84 4.17
186 187 4.141914 GGCTATTCTACTAGCAGTTGTGGT 60.142 45.833 5.55 0.00 44.84 4.16
187 188 4.806247 GCTATTCTACTAGCAGTTGTGGTG 59.194 45.833 0.00 0.00 42.98 4.17
188 189 3.678056 TTCTACTAGCAGTTGTGGTGG 57.322 47.619 0.00 0.00 38.54 4.61
189 190 1.275291 TCTACTAGCAGTTGTGGTGGC 59.725 52.381 0.00 0.00 36.17 5.01
190 191 1.276421 CTACTAGCAGTTGTGGTGGCT 59.724 52.381 0.00 0.00 36.17 4.75
191 192 1.348064 ACTAGCAGTTGTGGTGGCTA 58.652 50.000 0.00 0.00 36.17 3.93
192 193 1.697432 ACTAGCAGTTGTGGTGGCTAA 59.303 47.619 0.00 0.00 38.29 3.09
193 194 2.105821 ACTAGCAGTTGTGGTGGCTAAA 59.894 45.455 0.00 0.00 38.29 1.85
194 195 2.292828 AGCAGTTGTGGTGGCTAAAT 57.707 45.000 0.00 0.00 34.25 1.40
195 196 2.597455 AGCAGTTGTGGTGGCTAAATT 58.403 42.857 0.00 0.00 34.25 1.82
196 197 3.761897 AGCAGTTGTGGTGGCTAAATTA 58.238 40.909 0.00 0.00 34.25 1.40
197 198 3.506067 AGCAGTTGTGGTGGCTAAATTAC 59.494 43.478 0.00 0.00 34.25 1.89
198 199 3.254657 GCAGTTGTGGTGGCTAAATTACA 59.745 43.478 0.00 0.00 0.00 2.41
199 200 4.261825 GCAGTTGTGGTGGCTAAATTACAA 60.262 41.667 0.00 0.00 0.00 2.41
200 201 5.737635 GCAGTTGTGGTGGCTAAATTACAAA 60.738 40.000 0.00 0.00 30.86 2.83
201 202 5.920273 CAGTTGTGGTGGCTAAATTACAAAG 59.080 40.000 0.00 0.00 30.86 2.77
202 203 5.010617 AGTTGTGGTGGCTAAATTACAAAGG 59.989 40.000 0.00 0.00 30.86 3.11
203 204 4.730966 TGTGGTGGCTAAATTACAAAGGA 58.269 39.130 0.00 0.00 0.00 3.36
204 205 5.141182 TGTGGTGGCTAAATTACAAAGGAA 58.859 37.500 0.00 0.00 0.00 3.36
205 206 5.242838 TGTGGTGGCTAAATTACAAAGGAAG 59.757 40.000 0.00 0.00 0.00 3.46
206 207 5.243060 GTGGTGGCTAAATTACAAAGGAAGT 59.757 40.000 0.00 0.00 0.00 3.01
207 208 5.242838 TGGTGGCTAAATTACAAAGGAAGTG 59.757 40.000 0.00 0.00 0.00 3.16
208 209 5.336451 GGTGGCTAAATTACAAAGGAAGTGG 60.336 44.000 0.00 0.00 0.00 4.00
209 210 5.243060 GTGGCTAAATTACAAAGGAAGTGGT 59.757 40.000 0.00 0.00 0.00 4.16
210 211 5.242838 TGGCTAAATTACAAAGGAAGTGGTG 59.757 40.000 0.00 0.00 0.00 4.17
211 212 5.161358 GCTAAATTACAAAGGAAGTGGTGC 58.839 41.667 0.00 0.00 0.00 5.01
212 213 5.048013 GCTAAATTACAAAGGAAGTGGTGCT 60.048 40.000 0.00 0.00 0.00 4.40
213 214 5.453567 AAATTACAAAGGAAGTGGTGCTC 57.546 39.130 0.00 0.00 0.00 4.26
214 215 3.857157 TTACAAAGGAAGTGGTGCTCT 57.143 42.857 0.00 0.00 0.00 4.09
215 216 4.967084 TTACAAAGGAAGTGGTGCTCTA 57.033 40.909 0.00 0.00 0.00 2.43
216 217 3.409026 ACAAAGGAAGTGGTGCTCTAG 57.591 47.619 0.00 0.00 0.00 2.43
217 218 2.706190 ACAAAGGAAGTGGTGCTCTAGT 59.294 45.455 0.00 0.00 0.00 2.57
218 219 3.070018 CAAAGGAAGTGGTGCTCTAGTG 58.930 50.000 0.00 0.00 0.00 2.74
219 220 1.270907 AGGAAGTGGTGCTCTAGTGG 58.729 55.000 0.00 0.00 0.00 4.00
220 221 1.203187 AGGAAGTGGTGCTCTAGTGGA 60.203 52.381 0.00 0.00 0.00 4.02
221 222 1.205893 GGAAGTGGTGCTCTAGTGGAG 59.794 57.143 0.00 0.00 44.49 3.86
222 223 2.171840 GAAGTGGTGCTCTAGTGGAGA 58.828 52.381 7.84 0.00 44.45 3.71
232 233 2.548057 CTCTAGTGGAGAGTCTCGATGC 59.452 54.545 13.97 0.78 45.96 3.91
233 234 2.171659 TCTAGTGGAGAGTCTCGATGCT 59.828 50.000 13.97 10.80 0.00 3.79
234 235 1.388547 AGTGGAGAGTCTCGATGCTC 58.611 55.000 13.97 7.94 0.00 4.26
235 236 1.064758 AGTGGAGAGTCTCGATGCTCT 60.065 52.381 13.97 15.84 43.95 4.09
236 237 1.065401 GTGGAGAGTCTCGATGCTCTG 59.935 57.143 19.41 0.00 41.63 3.35
237 238 1.065126 TGGAGAGTCTCGATGCTCTGA 60.065 52.381 19.41 6.97 41.63 3.27
238 239 1.603802 GGAGAGTCTCGATGCTCTGAG 59.396 57.143 19.41 0.00 41.63 3.35
239 240 2.288666 GAGAGTCTCGATGCTCTGAGT 58.711 52.381 19.41 0.89 41.63 3.41
240 241 2.016318 AGAGTCTCGATGCTCTGAGTG 58.984 52.381 15.34 0.00 40.24 3.51
241 242 0.455410 AGTCTCGATGCTCTGAGTGC 59.545 55.000 6.53 0.00 33.88 4.40
242 243 0.455410 GTCTCGATGCTCTGAGTGCT 59.545 55.000 8.06 0.00 33.88 4.40
243 244 1.135141 GTCTCGATGCTCTGAGTGCTT 60.135 52.381 8.06 1.18 33.88 3.91
244 245 1.133982 TCTCGATGCTCTGAGTGCTTC 59.866 52.381 8.06 9.75 33.88 3.86
245 246 0.890683 TCGATGCTCTGAGTGCTTCA 59.109 50.000 18.28 6.76 35.27 3.02
246 247 1.479730 TCGATGCTCTGAGTGCTTCAT 59.520 47.619 18.28 0.60 34.68 2.57
247 248 1.593469 CGATGCTCTGAGTGCTTCATG 59.407 52.381 18.28 3.96 34.68 3.07
248 249 1.331138 GATGCTCTGAGTGCTTCATGC 59.669 52.381 14.87 8.68 43.25 4.06
249 250 0.323957 TGCTCTGAGTGCTTCATGCT 59.676 50.000 8.06 0.00 43.37 3.79
250 251 1.271217 TGCTCTGAGTGCTTCATGCTT 60.271 47.619 8.06 0.00 43.37 3.91
251 252 1.811359 GCTCTGAGTGCTTCATGCTTT 59.189 47.619 6.53 0.00 43.37 3.51
252 253 3.005554 GCTCTGAGTGCTTCATGCTTTA 58.994 45.455 6.53 0.00 43.37 1.85
253 254 3.626670 GCTCTGAGTGCTTCATGCTTTAT 59.373 43.478 6.53 0.00 43.37 1.40
254 255 4.813161 GCTCTGAGTGCTTCATGCTTTATA 59.187 41.667 6.53 0.00 43.37 0.98
255 256 5.469421 GCTCTGAGTGCTTCATGCTTTATAT 59.531 40.000 6.53 0.00 43.37 0.86
256 257 6.648310 GCTCTGAGTGCTTCATGCTTTATATA 59.352 38.462 6.53 0.00 43.37 0.86
257 258 7.333921 GCTCTGAGTGCTTCATGCTTTATATAT 59.666 37.037 6.53 0.00 43.37 0.86
258 259 9.866798 CTCTGAGTGCTTCATGCTTTATATATA 57.133 33.333 0.00 0.00 43.37 0.86
332 333 6.492286 CTGTAAGTTATGTATCGAACCGTG 57.508 41.667 0.00 0.00 0.00 4.94
333 334 6.193514 TGTAAGTTATGTATCGAACCGTGA 57.806 37.500 0.00 0.00 0.00 4.35
334 335 6.260377 TGTAAGTTATGTATCGAACCGTGAG 58.740 40.000 0.00 0.00 0.00 3.51
335 336 5.571784 AAGTTATGTATCGAACCGTGAGA 57.428 39.130 0.00 0.00 0.00 3.27
336 337 5.769484 AGTTATGTATCGAACCGTGAGAT 57.231 39.130 0.00 0.00 0.00 2.75
337 338 5.759963 AGTTATGTATCGAACCGTGAGATC 58.240 41.667 0.00 0.00 0.00 2.75
338 339 5.298527 AGTTATGTATCGAACCGTGAGATCA 59.701 40.000 0.00 0.00 0.00 2.92
339 340 4.649088 ATGTATCGAACCGTGAGATCAA 57.351 40.909 0.00 0.00 0.00 2.57
340 341 4.443913 TGTATCGAACCGTGAGATCAAA 57.556 40.909 0.00 0.00 0.00 2.69
341 342 4.811908 TGTATCGAACCGTGAGATCAAAA 58.188 39.130 0.00 0.00 0.00 2.44
342 343 4.862574 TGTATCGAACCGTGAGATCAAAAG 59.137 41.667 0.00 0.00 0.00 2.27
343 344 2.066262 TCGAACCGTGAGATCAAAAGC 58.934 47.619 0.00 0.00 0.00 3.51
344 345 1.798223 CGAACCGTGAGATCAAAAGCA 59.202 47.619 0.00 0.00 0.00 3.91
345 346 2.223144 CGAACCGTGAGATCAAAAGCAA 59.777 45.455 0.00 0.00 0.00 3.91
346 347 3.303725 CGAACCGTGAGATCAAAAGCAAA 60.304 43.478 0.00 0.00 0.00 3.68
347 348 3.904136 ACCGTGAGATCAAAAGCAAAG 57.096 42.857 0.00 0.00 0.00 2.77
348 349 3.476552 ACCGTGAGATCAAAAGCAAAGA 58.523 40.909 0.00 0.00 0.00 2.52
349 350 3.882888 ACCGTGAGATCAAAAGCAAAGAA 59.117 39.130 0.00 0.00 0.00 2.52
350 351 4.338118 ACCGTGAGATCAAAAGCAAAGAAA 59.662 37.500 0.00 0.00 0.00 2.52
351 352 5.010012 ACCGTGAGATCAAAAGCAAAGAAAT 59.990 36.000 0.00 0.00 0.00 2.17
352 353 6.206634 ACCGTGAGATCAAAAGCAAAGAAATA 59.793 34.615 0.00 0.00 0.00 1.40
353 354 7.083858 CCGTGAGATCAAAAGCAAAGAAATAA 58.916 34.615 0.00 0.00 0.00 1.40
354 355 7.594758 CCGTGAGATCAAAAGCAAAGAAATAAA 59.405 33.333 0.00 0.00 0.00 1.40
355 356 8.420189 CGTGAGATCAAAAGCAAAGAAATAAAC 58.580 33.333 0.00 0.00 0.00 2.01
356 357 9.248291 GTGAGATCAAAAGCAAAGAAATAAACA 57.752 29.630 0.00 0.00 0.00 2.83
357 358 9.248291 TGAGATCAAAAGCAAAGAAATAAACAC 57.752 29.630 0.00 0.00 0.00 3.32
358 359 9.248291 GAGATCAAAAGCAAAGAAATAAACACA 57.752 29.630 0.00 0.00 0.00 3.72
359 360 9.768662 AGATCAAAAGCAAAGAAATAAACACAT 57.231 25.926 0.00 0.00 0.00 3.21
363 364 9.862585 CAAAAGCAAAGAAATAAACACATAACC 57.137 29.630 0.00 0.00 0.00 2.85
364 365 7.867445 AAGCAAAGAAATAAACACATAACCG 57.133 32.000 0.00 0.00 0.00 4.44
365 366 6.977213 AGCAAAGAAATAAACACATAACCGT 58.023 32.000 0.00 0.00 0.00 4.83
366 367 7.081976 AGCAAAGAAATAAACACATAACCGTC 58.918 34.615 0.00 0.00 0.00 4.79
367 368 6.858993 GCAAAGAAATAAACACATAACCGTCA 59.141 34.615 0.00 0.00 0.00 4.35
368 369 7.149031 GCAAAGAAATAAACACATAACCGTCAC 60.149 37.037 0.00 0.00 0.00 3.67
369 370 6.160664 AGAAATAAACACATAACCGTCACG 57.839 37.500 0.00 0.00 0.00 4.35
409 410 5.720371 TTATCCAAAACCATCACACTTGG 57.280 39.130 0.00 0.00 40.26 3.61
424 425 2.025321 CACTTGGGGCTAGGGTAACAAT 60.025 50.000 0.00 0.00 39.74 2.71
493 495 2.094762 AATCTGTAACACGGAGCACC 57.905 50.000 0.00 0.00 36.85 5.01
527 529 2.479837 AGTCGTGAAAACAGCGAATCA 58.520 42.857 0.00 0.00 36.37 2.57
622 626 2.093447 CACCTGTCGGCCTCTCTTATTT 60.093 50.000 0.00 0.00 0.00 1.40
654 669 1.074566 CTCCCCAAGCCACTTTCTTCT 59.925 52.381 0.00 0.00 0.00 2.85
769 856 1.481242 CCCTGTGCCCTCTTCCTTTTT 60.481 52.381 0.00 0.00 0.00 1.94
828 915 0.189327 ATCATCTTCCCCCAATGCCC 59.811 55.000 0.00 0.00 0.00 5.36
898 992 1.323271 CGGAGCCTCCTAGCAAGACA 61.323 60.000 9.52 0.00 33.30 3.41
957 1243 3.650950 GGACCCTCCAGCCTGCAA 61.651 66.667 0.00 0.00 36.28 4.08
1055 1662 2.242043 CTTTTTGCAGGAGGTGATGGT 58.758 47.619 0.00 0.00 0.00 3.55
1064 1671 0.254178 GAGGTGATGGTGGCTCATGT 59.746 55.000 0.00 0.00 0.00 3.21
1202 1826 1.610363 CCATCGACATGGTGTGTTGGA 60.610 52.381 0.00 0.00 44.46 3.53
1209 1833 0.762418 ATGGTGTGTTGGAAGGACGA 59.238 50.000 0.00 0.00 0.00 4.20
1243 1867 0.842030 AGGAACCTGGAGCATGACCA 60.842 55.000 0.00 10.75 35.96 4.02
1255 1880 0.247460 CATGACCAGAAGCTCACGGA 59.753 55.000 2.48 0.00 0.00 4.69
1448 2074 1.972872 CACTTTGAGCAAGAGTGGGT 58.027 50.000 13.14 0.00 37.67 4.51
1453 2097 3.177884 AGCAAGAGTGGGTGGGCA 61.178 61.111 0.00 0.00 0.00 5.36
1569 2226 1.338020 CCCTTGTCCAACTCAGCAAAC 59.662 52.381 0.00 0.00 0.00 2.93
1613 2270 2.765969 CTGACAGGTGGGCCCAAT 59.234 61.111 30.64 16.65 34.66 3.16
1653 2319 3.041211 TCATGTGCTTATAGTGCTCCCT 58.959 45.455 0.00 0.00 0.00 4.20
1679 2345 7.448777 TGTTAGTCATTAGGCACAAAATTGGTA 59.551 33.333 0.00 0.00 0.00 3.25
1681 2347 6.010219 AGTCATTAGGCACAAAATTGGTAGT 58.990 36.000 0.00 0.00 0.00 2.73
1760 2426 4.221262 GGTGGTTTTGGGTAAATAACTCCC 59.779 45.833 0.00 0.00 41.41 4.30
1761 2427 4.221262 GTGGTTTTGGGTAAATAACTCCCC 59.779 45.833 0.00 0.00 40.41 4.81
1762 2428 4.108287 TGGTTTTGGGTAAATAACTCCCCT 59.892 41.667 0.00 0.00 40.41 4.79
1763 2429 4.464951 GGTTTTGGGTAAATAACTCCCCTG 59.535 45.833 0.00 0.00 40.41 4.45
1764 2430 5.081728 GTTTTGGGTAAATAACTCCCCTGT 58.918 41.667 0.00 0.00 40.41 4.00
1765 2431 5.342361 TTTGGGTAAATAACTCCCCTGTT 57.658 39.130 0.00 0.00 40.41 3.16
1766 2432 5.342361 TTGGGTAAATAACTCCCCTGTTT 57.658 39.130 0.00 0.00 40.41 2.83
1767 2433 4.668636 TGGGTAAATAACTCCCCTGTTTG 58.331 43.478 0.00 0.00 40.41 2.93
1768 2434 3.446161 GGGTAAATAACTCCCCTGTTTGC 59.554 47.826 0.00 0.00 35.52 3.68
1769 2435 3.446161 GGTAAATAACTCCCCTGTTTGCC 59.554 47.826 0.00 0.00 0.00 4.52
1770 2436 2.990740 AATAACTCCCCTGTTTGCCA 57.009 45.000 0.00 0.00 0.00 4.92
1771 2437 3.473113 AATAACTCCCCTGTTTGCCAT 57.527 42.857 0.00 0.00 0.00 4.40
1772 2438 4.601406 AATAACTCCCCTGTTTGCCATA 57.399 40.909 0.00 0.00 0.00 2.74
1773 2439 2.990740 AACTCCCCTGTTTGCCATAA 57.009 45.000 0.00 0.00 0.00 1.90
1774 2440 2.514458 ACTCCCCTGTTTGCCATAAG 57.486 50.000 0.00 0.00 0.00 1.73
1775 2441 1.005924 ACTCCCCTGTTTGCCATAAGG 59.994 52.381 0.00 0.00 38.23 2.69
1786 2452 3.336122 CCATAAGGGCATCTCCAGC 57.664 57.895 0.00 0.00 36.21 4.85
1813 2479 3.274601 CCCCCAGGACGCATAAAAA 57.725 52.632 0.00 0.00 33.47 1.94
1814 2480 1.775385 CCCCCAGGACGCATAAAAAT 58.225 50.000 0.00 0.00 33.47 1.82
1815 2481 1.681264 CCCCCAGGACGCATAAAAATC 59.319 52.381 0.00 0.00 33.47 2.17
1816 2482 1.333619 CCCCAGGACGCATAAAAATCG 59.666 52.381 0.00 0.00 0.00 3.34
1817 2483 1.268539 CCCAGGACGCATAAAAATCGC 60.269 52.381 0.00 0.00 0.00 4.58
1818 2484 1.268539 CCAGGACGCATAAAAATCGCC 60.269 52.381 0.00 0.00 0.00 5.54
1819 2485 1.021968 AGGACGCATAAAAATCGCCC 58.978 50.000 0.00 0.00 0.00 6.13
1820 2486 0.030235 GGACGCATAAAAATCGCCCC 59.970 55.000 0.00 0.00 0.00 5.80
1821 2487 0.030235 GACGCATAAAAATCGCCCCC 59.970 55.000 0.00 0.00 0.00 5.40
1822 2488 0.395173 ACGCATAAAAATCGCCCCCT 60.395 50.000 0.00 0.00 0.00 4.79
1823 2489 0.030638 CGCATAAAAATCGCCCCCTG 59.969 55.000 0.00 0.00 0.00 4.45
1824 2490 0.389025 GCATAAAAATCGCCCCCTGG 59.611 55.000 0.00 0.00 0.00 4.45
1843 2509 4.884257 GGCGAGCCGGCGATACAA 62.884 66.667 23.20 0.00 43.33 2.41
1844 2510 2.661866 GCGAGCCGGCGATACAAT 60.662 61.111 23.20 0.00 0.00 2.71
1845 2511 2.658707 GCGAGCCGGCGATACAATC 61.659 63.158 23.20 10.39 0.00 2.67
1854 2520 3.642755 GATACAATCGGCGCTGGG 58.357 61.111 17.88 9.12 0.00 4.45
1855 2521 1.961277 GATACAATCGGCGCTGGGG 60.961 63.158 17.88 8.74 0.00 4.96
1856 2522 3.476031 ATACAATCGGCGCTGGGGG 62.476 63.158 17.88 8.36 0.00 5.40
1873 2539 4.700365 GCGGTTTTGCGCCCAGTC 62.700 66.667 4.18 0.00 0.00 3.51
1874 2540 4.383602 CGGTTTTGCGCCCAGTCG 62.384 66.667 4.18 0.00 0.00 4.18
1875 2541 3.284449 GGTTTTGCGCCCAGTCGT 61.284 61.111 4.18 0.00 0.00 4.34
1876 2542 2.251371 GTTTTGCGCCCAGTCGTC 59.749 61.111 4.18 0.00 0.00 4.20
1877 2543 3.342627 TTTTGCGCCCAGTCGTCG 61.343 61.111 4.18 0.00 0.00 5.12
1907 2573 3.825611 CCCCAGGCGCCGAAATTG 61.826 66.667 23.20 13.64 0.00 2.32
1908 2574 3.825611 CCCAGGCGCCGAAATTGG 61.826 66.667 23.20 22.32 0.00 3.16
1918 2584 2.278026 CCGAAATTGGCCTACTTTGC 57.722 50.000 3.32 0.00 0.00 3.68
1919 2585 1.543802 CCGAAATTGGCCTACTTTGCA 59.456 47.619 3.32 0.00 0.00 4.08
1920 2586 2.415893 CCGAAATTGGCCTACTTTGCAG 60.416 50.000 3.32 0.00 0.00 4.41
1921 2587 2.610433 GAAATTGGCCTACTTTGCAGC 58.390 47.619 3.32 0.00 0.00 5.25
1922 2588 0.897621 AATTGGCCTACTTTGCAGCC 59.102 50.000 3.32 5.48 45.96 4.85
1923 2589 0.972471 ATTGGCCTACTTTGCAGCCC 60.972 55.000 3.32 0.00 45.14 5.19
1924 2590 2.035626 GGCCTACTTTGCAGCCCA 59.964 61.111 0.00 0.00 39.60 5.36
1925 2591 1.606313 GGCCTACTTTGCAGCCCAA 60.606 57.895 0.00 0.00 39.60 4.12
1926 2592 0.972471 GGCCTACTTTGCAGCCCAAT 60.972 55.000 0.00 0.00 39.60 3.16
1927 2593 0.897621 GCCTACTTTGCAGCCCAATT 59.102 50.000 0.00 0.00 32.49 2.32
1928 2594 1.276138 GCCTACTTTGCAGCCCAATTT 59.724 47.619 0.00 0.00 32.49 1.82
1929 2595 2.675032 GCCTACTTTGCAGCCCAATTTC 60.675 50.000 0.00 0.00 32.49 2.17
1930 2596 2.415893 CCTACTTTGCAGCCCAATTTCG 60.416 50.000 0.00 0.00 32.49 3.46
1931 2597 0.318120 ACTTTGCAGCCCAATTTCGG 59.682 50.000 0.00 0.00 32.49 4.30
1940 2606 2.994849 GCCCAATTTCGGCGTATAAAG 58.005 47.619 6.85 0.00 36.47 1.85
1941 2607 2.287368 GCCCAATTTCGGCGTATAAAGG 60.287 50.000 6.85 4.04 36.47 3.11
1942 2608 2.292292 CCCAATTTCGGCGTATAAAGGG 59.708 50.000 6.85 9.14 0.00 3.95
1943 2609 2.287368 CCAATTTCGGCGTATAAAGGGC 60.287 50.000 6.85 0.00 0.00 5.19
1944 2610 1.601166 ATTTCGGCGTATAAAGGGCC 58.399 50.000 6.85 0.00 43.42 5.80
1945 2611 0.464193 TTTCGGCGTATAAAGGGCCC 60.464 55.000 16.46 16.46 43.99 5.80
1946 2612 1.624479 TTCGGCGTATAAAGGGCCCA 61.624 55.000 27.56 2.74 43.99 5.36
1947 2613 1.072505 CGGCGTATAAAGGGCCCAT 59.927 57.895 27.56 10.06 43.99 4.00
1948 2614 0.322322 CGGCGTATAAAGGGCCCATA 59.678 55.000 27.56 17.50 43.99 2.74
1949 2615 1.065709 CGGCGTATAAAGGGCCCATAT 60.066 52.381 27.56 23.12 43.99 1.78
1950 2616 2.365582 GGCGTATAAAGGGCCCATATG 58.634 52.381 27.56 18.91 41.01 1.78
1951 2617 2.365582 GCGTATAAAGGGCCCATATGG 58.634 52.381 27.56 15.41 37.09 2.74
1963 2629 2.029838 CCATATGGGCGAGAATAGGC 57.970 55.000 14.52 0.00 34.95 3.93
1970 2636 2.789409 GGCGAGAATAGGCCCATATT 57.211 50.000 0.00 0.00 43.64 1.28
1971 2637 2.633488 GGCGAGAATAGGCCCATATTC 58.367 52.381 14.20 14.20 43.64 1.75
1972 2638 2.271800 GCGAGAATAGGCCCATATTCG 58.728 52.381 15.47 13.38 43.79 3.34
1973 2639 2.893637 CGAGAATAGGCCCATATTCGG 58.106 52.381 15.47 10.10 43.79 4.30
1974 2640 2.633488 GAGAATAGGCCCATATTCGGC 58.367 52.381 15.47 10.24 43.79 5.54
1979 2645 2.203153 GCCCATATTCGGCGTGGT 60.203 61.111 6.85 0.00 36.47 4.16
1980 2646 1.822186 GCCCATATTCGGCGTGGTT 60.822 57.895 6.85 0.00 36.47 3.67
1981 2647 1.381165 GCCCATATTCGGCGTGGTTT 61.381 55.000 6.85 0.00 36.47 3.27
1982 2648 0.661020 CCCATATTCGGCGTGGTTTC 59.339 55.000 6.85 0.00 0.00 2.78
1983 2649 0.303493 CCATATTCGGCGTGGTTTCG 59.697 55.000 6.85 0.00 0.00 3.46
1991 2657 2.660552 CGTGGTTTCGCCGTGTCT 60.661 61.111 0.00 0.00 41.21 3.41
1992 2658 2.654912 CGTGGTTTCGCCGTGTCTC 61.655 63.158 0.00 0.00 41.21 3.36
1993 2659 2.355363 TGGTTTCGCCGTGTCTCG 60.355 61.111 0.00 0.00 41.21 4.04
1994 2660 2.049802 GGTTTCGCCGTGTCTCGA 60.050 61.111 0.00 0.00 42.86 4.04
1995 2661 2.370393 GGTTTCGCCGTGTCTCGAC 61.370 63.158 0.00 0.00 42.86 4.20
1996 2662 2.427905 TTTCGCCGTGTCTCGACG 60.428 61.111 0.00 0.00 45.91 5.12
1997 2663 3.185082 TTTCGCCGTGTCTCGACGT 62.185 57.895 3.10 0.00 44.91 4.34
1998 2664 2.666715 TTTCGCCGTGTCTCGACGTT 62.667 55.000 3.10 0.00 44.91 3.99
1999 2665 3.164011 CGCCGTGTCTCGACGTTC 61.164 66.667 0.00 0.00 40.25 3.95
2000 2666 2.050714 GCCGTGTCTCGACGTTCA 60.051 61.111 0.00 0.00 42.86 3.18
2001 2667 1.659335 GCCGTGTCTCGACGTTCAA 60.659 57.895 0.00 0.00 42.86 2.69
2002 2668 1.007336 GCCGTGTCTCGACGTTCAAT 61.007 55.000 0.00 0.00 42.86 2.57
2003 2669 1.415374 CCGTGTCTCGACGTTCAATT 58.585 50.000 0.00 0.00 42.86 2.32
2004 2670 2.587956 CCGTGTCTCGACGTTCAATTA 58.412 47.619 0.00 0.00 42.86 1.40
2005 2671 3.176708 CCGTGTCTCGACGTTCAATTAT 58.823 45.455 0.00 0.00 42.86 1.28
2006 2672 3.239941 CCGTGTCTCGACGTTCAATTATC 59.760 47.826 0.00 0.00 42.86 1.75
2007 2673 3.849708 CGTGTCTCGACGTTCAATTATCA 59.150 43.478 0.00 0.00 42.86 2.15
2008 2674 4.322539 CGTGTCTCGACGTTCAATTATCAA 59.677 41.667 0.00 0.00 42.86 2.57
2009 2675 5.539207 GTGTCTCGACGTTCAATTATCAAC 58.461 41.667 0.00 0.00 0.00 3.18
2010 2676 5.118050 GTGTCTCGACGTTCAATTATCAACA 59.882 40.000 0.00 0.00 0.00 3.33
2011 2677 5.118050 TGTCTCGACGTTCAATTATCAACAC 59.882 40.000 0.00 0.00 0.00 3.32
2012 2678 5.118050 GTCTCGACGTTCAATTATCAACACA 59.882 40.000 0.00 0.00 0.00 3.72
2013 2679 5.692654 TCTCGACGTTCAATTATCAACACAA 59.307 36.000 0.00 0.00 0.00 3.33
2014 2680 6.367695 TCTCGACGTTCAATTATCAACACAAT 59.632 34.615 0.00 0.00 0.00 2.71
2015 2681 6.893759 TCGACGTTCAATTATCAACACAATT 58.106 32.000 0.00 0.00 0.00 2.32
2016 2682 8.019769 TCGACGTTCAATTATCAACACAATTA 57.980 30.769 0.00 0.00 0.00 1.40
2017 2683 8.661257 TCGACGTTCAATTATCAACACAATTAT 58.339 29.630 0.00 0.00 0.00 1.28
2018 2684 9.272901 CGACGTTCAATTATCAACACAATTATT 57.727 29.630 0.00 0.00 0.00 1.40
2079 2745 9.915629 ACTTCAACAAAATAGTACAACAACAAA 57.084 25.926 0.00 0.00 0.00 2.83
2134 2800 8.874745 AATAAAAACTCGTATTTCATCACACG 57.125 30.769 0.00 0.00 35.78 4.49
2135 2801 4.921470 AAACTCGTATTTCATCACACGG 57.079 40.909 0.00 0.00 35.21 4.94
2136 2802 2.268298 ACTCGTATTTCATCACACGGC 58.732 47.619 0.00 0.00 35.21 5.68
2137 2803 1.255342 CTCGTATTTCATCACACGGCG 59.745 52.381 4.80 4.80 35.21 6.46
2138 2804 0.996462 CGTATTTCATCACACGGCGT 59.004 50.000 6.77 6.77 0.00 5.68
2139 2805 1.006391 CGTATTTCATCACACGGCGTC 60.006 52.381 10.85 0.00 0.00 5.19
2140 2806 1.326548 GTATTTCATCACACGGCGTCC 59.673 52.381 10.85 0.00 0.00 4.79
2141 2807 1.024579 ATTTCATCACACGGCGTCCC 61.025 55.000 10.85 0.00 0.00 4.46
2142 2808 3.599285 TTCATCACACGGCGTCCCC 62.599 63.158 10.85 0.00 0.00 4.81
2148 2814 4.760047 CACGGCGTCCCCCTTGAG 62.760 72.222 10.85 0.00 0.00 3.02
2152 2818 4.475135 GCGTCCCCCTTGAGCCTC 62.475 72.222 0.00 0.00 0.00 4.70
2153 2819 3.787001 CGTCCCCCTTGAGCCTCC 61.787 72.222 0.00 0.00 0.00 4.30
2154 2820 2.610859 GTCCCCCTTGAGCCTCCA 60.611 66.667 0.00 0.00 0.00 3.86
2155 2821 2.003548 GTCCCCCTTGAGCCTCCAT 61.004 63.158 0.00 0.00 0.00 3.41
2156 2822 0.694444 GTCCCCCTTGAGCCTCCATA 60.694 60.000 0.00 0.00 0.00 2.74
2157 2823 0.400525 TCCCCCTTGAGCCTCCATAG 60.401 60.000 0.00 0.00 0.00 2.23
2158 2824 1.422161 CCCCCTTGAGCCTCCATAGG 61.422 65.000 0.00 0.00 46.76 2.57
2159 2825 0.695803 CCCCTTGAGCCTCCATAGGT 60.696 60.000 0.00 0.00 45.64 3.08
2160 2826 0.471617 CCCTTGAGCCTCCATAGGTG 59.528 60.000 0.00 0.00 45.64 4.00
2161 2827 0.179034 CCTTGAGCCTCCATAGGTGC 60.179 60.000 0.00 0.00 45.64 5.01
2162 2828 0.835941 CTTGAGCCTCCATAGGTGCT 59.164 55.000 3.23 3.23 45.64 4.40
2163 2829 0.833287 TTGAGCCTCCATAGGTGCTC 59.167 55.000 17.36 17.36 45.64 4.26
2164 2830 0.325577 TGAGCCTCCATAGGTGCTCA 60.326 55.000 20.71 20.71 46.95 4.26
2165 2831 0.833287 GAGCCTCCATAGGTGCTCAA 59.167 55.000 18.51 0.00 45.64 3.02
2166 2832 1.419387 GAGCCTCCATAGGTGCTCAAT 59.581 52.381 18.51 0.00 45.64 2.57
2167 2833 1.419387 AGCCTCCATAGGTGCTCAATC 59.581 52.381 0.00 0.00 45.64 2.67
2168 2834 1.141657 GCCTCCATAGGTGCTCAATCA 59.858 52.381 0.00 0.00 45.64 2.57
2169 2835 2.809665 GCCTCCATAGGTGCTCAATCAG 60.810 54.545 0.00 0.00 45.64 2.90
2170 2836 2.702478 CCTCCATAGGTGCTCAATCAGA 59.298 50.000 0.00 0.00 38.19 3.27
2171 2837 3.327172 CCTCCATAGGTGCTCAATCAGAT 59.673 47.826 0.00 0.00 38.19 2.90
2172 2838 4.563168 CCTCCATAGGTGCTCAATCAGATC 60.563 50.000 0.00 0.00 38.19 2.75
2173 2839 4.229639 TCCATAGGTGCTCAATCAGATCT 58.770 43.478 0.00 0.00 0.00 2.75
2174 2840 4.657504 TCCATAGGTGCTCAATCAGATCTT 59.342 41.667 0.00 0.00 0.00 2.40
2175 2841 5.131642 TCCATAGGTGCTCAATCAGATCTTT 59.868 40.000 0.00 0.00 0.00 2.52
2176 2842 5.469421 CCATAGGTGCTCAATCAGATCTTTC 59.531 44.000 0.00 0.00 0.00 2.62
2177 2843 4.840716 AGGTGCTCAATCAGATCTTTCT 57.159 40.909 0.00 0.00 0.00 2.52
2190 2856 5.811588 CAGATCTTTCTGCAGTTGATGATG 58.188 41.667 14.67 11.81 42.79 3.07
2191 2857 4.335874 AGATCTTTCTGCAGTTGATGATGC 59.664 41.667 14.67 4.61 42.86 3.91
2193 2859 3.189910 TCTTTCTGCAGTTGATGATGCAC 59.810 43.478 14.67 0.00 46.97 4.57
2194 2860 2.484742 TCTGCAGTTGATGATGCACT 57.515 45.000 14.67 0.00 46.97 4.40
2195 2861 2.786777 TCTGCAGTTGATGATGCACTT 58.213 42.857 14.67 0.00 46.97 3.16
2196 2862 2.486592 TCTGCAGTTGATGATGCACTTG 59.513 45.455 14.67 0.00 46.97 3.16
2197 2863 2.228103 CTGCAGTTGATGATGCACTTGT 59.772 45.455 5.25 0.00 46.97 3.16
2198 2864 2.030628 TGCAGTTGATGATGCACTTGTG 60.031 45.455 0.00 0.00 46.97 3.33
2199 2865 2.670229 GCAGTTGATGATGCACTTGTGG 60.670 50.000 2.81 0.00 42.11 4.17
2200 2866 2.094906 CAGTTGATGATGCACTTGTGGG 60.095 50.000 2.81 0.00 0.00 4.61
2201 2867 1.888512 GTTGATGATGCACTTGTGGGT 59.111 47.619 2.81 0.00 0.00 4.51
2202 2868 1.825090 TGATGATGCACTTGTGGGTC 58.175 50.000 2.81 0.00 0.00 4.46
2203 2869 1.352017 TGATGATGCACTTGTGGGTCT 59.648 47.619 2.81 0.00 0.00 3.85
2204 2870 2.012673 GATGATGCACTTGTGGGTCTC 58.987 52.381 2.81 0.00 0.00 3.36
2205 2871 0.320683 TGATGCACTTGTGGGTCTCG 60.321 55.000 2.81 0.00 0.00 4.04
2206 2872 1.003355 ATGCACTTGTGGGTCTCGG 60.003 57.895 2.81 0.00 0.00 4.63
2207 2873 1.480212 ATGCACTTGTGGGTCTCGGA 61.480 55.000 2.81 0.00 0.00 4.55
2208 2874 1.296715 GCACTTGTGGGTCTCGGAT 59.703 57.895 2.81 0.00 0.00 4.18
2209 2875 0.741221 GCACTTGTGGGTCTCGGATC 60.741 60.000 2.81 0.00 0.00 3.36
2210 2876 0.898320 CACTTGTGGGTCTCGGATCT 59.102 55.000 0.00 0.00 0.00 2.75
2211 2877 1.134965 CACTTGTGGGTCTCGGATCTC 60.135 57.143 0.00 0.00 0.00 2.75
2212 2878 0.461961 CTTGTGGGTCTCGGATCTCC 59.538 60.000 0.00 0.00 0.00 3.71
2213 2879 0.041238 TTGTGGGTCTCGGATCTCCT 59.959 55.000 0.00 0.00 0.00 3.69
2214 2880 0.684479 TGTGGGTCTCGGATCTCCTG 60.684 60.000 0.00 0.00 0.00 3.86
2215 2881 0.395862 GTGGGTCTCGGATCTCCTGA 60.396 60.000 0.00 0.00 0.00 3.86
2216 2882 0.395862 TGGGTCTCGGATCTCCTGAC 60.396 60.000 9.40 9.40 36.84 3.51
2217 2883 1.448922 GGGTCTCGGATCTCCTGACG 61.449 65.000 10.82 0.00 37.73 4.35
2218 2884 1.357334 GTCTCGGATCTCCTGACGC 59.643 63.158 0.00 0.00 31.38 5.19
2219 2885 1.077716 TCTCGGATCTCCTGACGCA 60.078 57.895 0.00 0.00 0.00 5.24
2220 2886 0.466372 TCTCGGATCTCCTGACGCAT 60.466 55.000 0.00 0.00 0.00 4.73
2221 2887 1.202770 TCTCGGATCTCCTGACGCATA 60.203 52.381 0.00 0.00 0.00 3.14
2222 2888 0.952280 TCGGATCTCCTGACGCATAC 59.048 55.000 0.00 0.00 0.00 2.39
2223 2889 0.955178 CGGATCTCCTGACGCATACT 59.045 55.000 0.00 0.00 0.00 2.12
2224 2890 1.335415 CGGATCTCCTGACGCATACTG 60.335 57.143 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.770010 TTTATTTATGAATTTATGGGACGGGT 57.230 30.769 0.00 0.00 0.00 5.28
1 2 9.691362 CTTTTATTTATGAATTTATGGGACGGG 57.309 33.333 0.00 0.00 0.00 5.28
2 3 9.191995 GCTTTTATTTATGAATTTATGGGACGG 57.808 33.333 0.00 0.00 0.00 4.79
3 4 9.743057 TGCTTTTATTTATGAATTTATGGGACG 57.257 29.630 0.00 0.00 0.00 4.79
16 17 9.853555 TGGTTTCACATAGTGCTTTTATTTATG 57.146 29.630 0.00 0.00 32.98 1.90
18 19 9.906660 CTTGGTTTCACATAGTGCTTTTATTTA 57.093 29.630 0.00 0.00 32.98 1.40
19 20 8.637986 TCTTGGTTTCACATAGTGCTTTTATTT 58.362 29.630 0.00 0.00 32.98 1.40
20 21 8.177119 TCTTGGTTTCACATAGTGCTTTTATT 57.823 30.769 0.00 0.00 32.98 1.40
21 22 7.759489 TCTTGGTTTCACATAGTGCTTTTAT 57.241 32.000 0.00 0.00 32.98 1.40
22 23 7.575414 TTCTTGGTTTCACATAGTGCTTTTA 57.425 32.000 0.00 0.00 32.98 1.52
23 24 6.463995 TTCTTGGTTTCACATAGTGCTTTT 57.536 33.333 0.00 0.00 32.98 2.27
24 25 6.096846 AGTTTCTTGGTTTCACATAGTGCTTT 59.903 34.615 0.00 0.00 32.98 3.51
25 26 5.594317 AGTTTCTTGGTTTCACATAGTGCTT 59.406 36.000 0.00 0.00 32.98 3.91
26 27 5.133221 AGTTTCTTGGTTTCACATAGTGCT 58.867 37.500 0.00 0.00 32.98 4.40
27 28 5.438761 AGTTTCTTGGTTTCACATAGTGC 57.561 39.130 0.00 0.00 32.98 4.40
28 29 7.490962 TGTAGTTTCTTGGTTTCACATAGTG 57.509 36.000 0.00 0.00 34.45 2.74
29 30 8.691661 AATGTAGTTTCTTGGTTTCACATAGT 57.308 30.769 0.00 0.00 0.00 2.12
33 34 9.959749 GAAATAATGTAGTTTCTTGGTTTCACA 57.040 29.630 0.00 0.00 32.87 3.58
34 35 9.959749 TGAAATAATGTAGTTTCTTGGTTTCAC 57.040 29.630 0.00 0.00 35.80 3.18
39 40 9.744468 GTTGTTGAAATAATGTAGTTTCTTGGT 57.256 29.630 0.00 0.00 35.80 3.67
40 41 9.743057 TGTTGTTGAAATAATGTAGTTTCTTGG 57.257 29.630 0.00 0.00 35.80 3.61
61 62 8.745590 GGGAAAACCATATGTAACTTATGTTGT 58.254 33.333 1.24 0.00 39.85 3.32
62 63 8.966868 AGGGAAAACCATATGTAACTTATGTTG 58.033 33.333 1.24 0.00 43.89 3.33
63 64 9.541884 AAGGGAAAACCATATGTAACTTATGTT 57.458 29.630 1.24 0.00 43.89 2.71
64 65 9.541884 AAAGGGAAAACCATATGTAACTTATGT 57.458 29.630 1.24 0.00 43.89 2.29
66 67 8.899771 CGAAAGGGAAAACCATATGTAACTTAT 58.100 33.333 1.24 0.00 43.89 1.73
67 68 8.271312 CGAAAGGGAAAACCATATGTAACTTA 57.729 34.615 1.24 0.00 43.89 2.24
68 69 7.153217 CGAAAGGGAAAACCATATGTAACTT 57.847 36.000 1.24 0.00 43.89 2.66
69 70 6.753107 CGAAAGGGAAAACCATATGTAACT 57.247 37.500 1.24 0.00 43.89 2.24
99 100 2.081462 GTTGTGTGTAATCCCTTCGGG 58.919 52.381 0.00 0.00 46.11 5.14
100 101 3.053831 AGTTGTGTGTAATCCCTTCGG 57.946 47.619 0.00 0.00 0.00 4.30
101 102 4.081862 TCCTAGTTGTGTGTAATCCCTTCG 60.082 45.833 0.00 0.00 0.00 3.79
102 103 5.416271 TCCTAGTTGTGTGTAATCCCTTC 57.584 43.478 0.00 0.00 0.00 3.46
103 104 5.836024 TTCCTAGTTGTGTGTAATCCCTT 57.164 39.130 0.00 0.00 0.00 3.95
104 105 5.836024 TTTCCTAGTTGTGTGTAATCCCT 57.164 39.130 0.00 0.00 0.00 4.20
105 106 7.066645 GGTAATTTCCTAGTTGTGTGTAATCCC 59.933 40.741 0.00 0.00 0.00 3.85
106 107 7.827729 AGGTAATTTCCTAGTTGTGTGTAATCC 59.172 37.037 1.04 0.00 35.87 3.01
107 108 8.788325 AGGTAATTTCCTAGTTGTGTGTAATC 57.212 34.615 1.04 0.00 35.87 1.75
108 109 9.227777 GAAGGTAATTTCCTAGTTGTGTGTAAT 57.772 33.333 3.78 0.00 36.74 1.89
109 110 8.212312 TGAAGGTAATTTCCTAGTTGTGTGTAA 58.788 33.333 3.78 0.00 36.74 2.41
110 111 7.737869 TGAAGGTAATTTCCTAGTTGTGTGTA 58.262 34.615 3.78 0.00 36.74 2.90
111 112 6.597562 TGAAGGTAATTTCCTAGTTGTGTGT 58.402 36.000 3.78 0.00 36.74 3.72
112 113 7.504924 TTGAAGGTAATTTCCTAGTTGTGTG 57.495 36.000 3.78 0.00 36.74 3.82
113 114 7.778382 AGTTTGAAGGTAATTTCCTAGTTGTGT 59.222 33.333 3.78 0.00 36.74 3.72
114 115 8.166422 AGTTTGAAGGTAATTTCCTAGTTGTG 57.834 34.615 3.78 0.00 36.74 3.33
115 116 8.218488 AGAGTTTGAAGGTAATTTCCTAGTTGT 58.782 33.333 3.78 0.00 36.74 3.32
116 117 8.622948 AGAGTTTGAAGGTAATTTCCTAGTTG 57.377 34.615 3.78 0.00 36.74 3.16
117 118 9.067986 CAAGAGTTTGAAGGTAATTTCCTAGTT 57.932 33.333 3.78 0.00 36.74 2.24
118 119 7.665974 CCAAGAGTTTGAAGGTAATTTCCTAGT 59.334 37.037 3.78 0.00 36.74 2.57
119 120 7.362142 GCCAAGAGTTTGAAGGTAATTTCCTAG 60.362 40.741 3.78 0.00 36.74 3.02
120 121 6.433093 GCCAAGAGTTTGAAGGTAATTTCCTA 59.567 38.462 3.78 0.00 36.74 2.94
121 122 5.243954 GCCAAGAGTTTGAAGGTAATTTCCT 59.756 40.000 0.00 0.00 39.84 3.36
122 123 5.470368 GCCAAGAGTTTGAAGGTAATTTCC 58.530 41.667 0.00 0.00 36.36 3.13
123 124 5.048991 TCGCCAAGAGTTTGAAGGTAATTTC 60.049 40.000 0.00 0.00 36.36 2.17
124 125 4.825085 TCGCCAAGAGTTTGAAGGTAATTT 59.175 37.500 0.00 0.00 36.36 1.82
125 126 4.394729 TCGCCAAGAGTTTGAAGGTAATT 58.605 39.130 0.00 0.00 36.36 1.40
126 127 4.015872 TCGCCAAGAGTTTGAAGGTAAT 57.984 40.909 0.00 0.00 36.36 1.89
127 128 3.478857 TCGCCAAGAGTTTGAAGGTAA 57.521 42.857 0.00 0.00 36.36 2.85
128 129 3.135994 GTTCGCCAAGAGTTTGAAGGTA 58.864 45.455 0.00 0.00 36.36 3.08
129 130 1.947456 GTTCGCCAAGAGTTTGAAGGT 59.053 47.619 0.00 0.00 36.36 3.50
130 131 2.222027 AGTTCGCCAAGAGTTTGAAGG 58.778 47.619 0.00 0.00 36.36 3.46
131 132 4.611581 GCTTAGTTCGCCAAGAGTTTGAAG 60.612 45.833 0.00 0.00 36.36 3.02
132 133 3.250040 GCTTAGTTCGCCAAGAGTTTGAA 59.750 43.478 0.00 0.00 36.36 2.69
133 134 2.806244 GCTTAGTTCGCCAAGAGTTTGA 59.194 45.455 0.00 0.00 36.36 2.69
134 135 2.411547 CGCTTAGTTCGCCAAGAGTTTG 60.412 50.000 0.00 0.00 0.00 2.93
135 136 1.798813 CGCTTAGTTCGCCAAGAGTTT 59.201 47.619 0.00 0.00 0.00 2.66
136 137 1.429463 CGCTTAGTTCGCCAAGAGTT 58.571 50.000 0.00 0.00 0.00 3.01
137 138 1.014564 GCGCTTAGTTCGCCAAGAGT 61.015 55.000 0.00 0.00 46.18 3.24
138 139 1.710339 GCGCTTAGTTCGCCAAGAG 59.290 57.895 0.00 0.00 46.18 2.85
139 140 3.870606 GCGCTTAGTTCGCCAAGA 58.129 55.556 0.00 0.00 46.18 3.02
145 146 0.721718 CCAAGAAGGCGCTTAGTTCG 59.278 55.000 7.64 0.00 0.00 3.95
156 157 5.069781 ACTGCTAGTAGAATAGCCAAGAAGG 59.930 44.000 15.37 0.00 46.27 3.46
157 158 6.155475 ACTGCTAGTAGAATAGCCAAGAAG 57.845 41.667 15.37 0.21 46.27 2.85
158 159 6.070767 ACAACTGCTAGTAGAATAGCCAAGAA 60.071 38.462 15.37 0.00 46.27 2.52
159 160 5.422331 ACAACTGCTAGTAGAATAGCCAAGA 59.578 40.000 15.37 0.00 46.27 3.02
160 161 5.521735 CACAACTGCTAGTAGAATAGCCAAG 59.478 44.000 15.37 1.50 46.27 3.61
161 162 5.419542 CACAACTGCTAGTAGAATAGCCAA 58.580 41.667 15.37 0.00 46.27 4.52
162 163 4.141937 CCACAACTGCTAGTAGAATAGCCA 60.142 45.833 15.37 0.00 46.27 4.75
163 164 4.141914 ACCACAACTGCTAGTAGAATAGCC 60.142 45.833 15.37 0.00 46.27 3.93
164 165 4.806247 CACCACAACTGCTAGTAGAATAGC 59.194 45.833 15.37 2.10 46.86 2.97
165 166 5.352284 CCACCACAACTGCTAGTAGAATAG 58.648 45.833 15.37 3.82 0.00 1.73
166 167 4.382685 GCCACCACAACTGCTAGTAGAATA 60.383 45.833 15.37 0.00 0.00 1.75
167 168 3.619979 GCCACCACAACTGCTAGTAGAAT 60.620 47.826 15.37 0.00 0.00 2.40
168 169 2.289444 GCCACCACAACTGCTAGTAGAA 60.289 50.000 15.37 0.00 0.00 2.10
169 170 1.275291 GCCACCACAACTGCTAGTAGA 59.725 52.381 15.37 0.00 0.00 2.59
170 171 1.276421 AGCCACCACAACTGCTAGTAG 59.724 52.381 6.26 6.26 30.97 2.57
171 172 1.348064 AGCCACCACAACTGCTAGTA 58.652 50.000 0.00 0.00 30.97 1.82
172 173 1.348064 TAGCCACCACAACTGCTAGT 58.652 50.000 0.00 0.00 35.34 2.57
173 174 2.472695 TTAGCCACCACAACTGCTAG 57.527 50.000 0.00 0.00 37.59 3.42
174 175 2.940994 TTTAGCCACCACAACTGCTA 57.059 45.000 0.00 0.00 35.34 3.49
175 176 2.292828 ATTTAGCCACCACAACTGCT 57.707 45.000 0.00 0.00 37.84 4.24
176 177 3.254657 TGTAATTTAGCCACCACAACTGC 59.745 43.478 0.00 0.00 0.00 4.40
177 178 5.446143 TTGTAATTTAGCCACCACAACTG 57.554 39.130 0.00 0.00 0.00 3.16
178 179 5.010617 CCTTTGTAATTTAGCCACCACAACT 59.989 40.000 0.00 0.00 0.00 3.16
179 180 5.010213 TCCTTTGTAATTTAGCCACCACAAC 59.990 40.000 0.00 0.00 0.00 3.32
180 181 5.141182 TCCTTTGTAATTTAGCCACCACAA 58.859 37.500 0.00 0.00 0.00 3.33
181 182 4.730966 TCCTTTGTAATTTAGCCACCACA 58.269 39.130 0.00 0.00 0.00 4.17
182 183 5.243060 ACTTCCTTTGTAATTTAGCCACCAC 59.757 40.000 0.00 0.00 0.00 4.16
183 184 5.242838 CACTTCCTTTGTAATTTAGCCACCA 59.757 40.000 0.00 0.00 0.00 4.17
184 185 5.336451 CCACTTCCTTTGTAATTTAGCCACC 60.336 44.000 0.00 0.00 0.00 4.61
185 186 5.243060 ACCACTTCCTTTGTAATTTAGCCAC 59.757 40.000 0.00 0.00 0.00 5.01
186 187 5.242838 CACCACTTCCTTTGTAATTTAGCCA 59.757 40.000 0.00 0.00 0.00 4.75
187 188 5.709966 CACCACTTCCTTTGTAATTTAGCC 58.290 41.667 0.00 0.00 0.00 3.93
188 189 5.048013 AGCACCACTTCCTTTGTAATTTAGC 60.048 40.000 0.00 0.00 0.00 3.09
189 190 6.431234 AGAGCACCACTTCCTTTGTAATTTAG 59.569 38.462 0.00 0.00 0.00 1.85
190 191 6.303839 AGAGCACCACTTCCTTTGTAATTTA 58.696 36.000 0.00 0.00 0.00 1.40
191 192 5.140454 AGAGCACCACTTCCTTTGTAATTT 58.860 37.500 0.00 0.00 0.00 1.82
192 193 4.729868 AGAGCACCACTTCCTTTGTAATT 58.270 39.130 0.00 0.00 0.00 1.40
193 194 4.373156 AGAGCACCACTTCCTTTGTAAT 57.627 40.909 0.00 0.00 0.00 1.89
194 195 3.857157 AGAGCACCACTTCCTTTGTAA 57.143 42.857 0.00 0.00 0.00 2.41
195 196 3.901844 ACTAGAGCACCACTTCCTTTGTA 59.098 43.478 0.00 0.00 0.00 2.41
196 197 2.706190 ACTAGAGCACCACTTCCTTTGT 59.294 45.455 0.00 0.00 0.00 2.83
197 198 3.070018 CACTAGAGCACCACTTCCTTTG 58.930 50.000 0.00 0.00 0.00 2.77
198 199 2.039084 CCACTAGAGCACCACTTCCTTT 59.961 50.000 0.00 0.00 0.00 3.11
199 200 1.625818 CCACTAGAGCACCACTTCCTT 59.374 52.381 0.00 0.00 0.00 3.36
200 201 1.203187 TCCACTAGAGCACCACTTCCT 60.203 52.381 0.00 0.00 0.00 3.36
201 202 1.205893 CTCCACTAGAGCACCACTTCC 59.794 57.143 0.00 0.00 35.31 3.46
202 203 2.165437 CTCTCCACTAGAGCACCACTTC 59.835 54.545 0.00 0.00 45.22 3.01
203 204 2.175202 CTCTCCACTAGAGCACCACTT 58.825 52.381 0.00 0.00 45.22 3.16
204 205 1.846007 CTCTCCACTAGAGCACCACT 58.154 55.000 0.00 0.00 45.22 4.00
212 213 2.171659 AGCATCGAGACTCTCCACTAGA 59.828 50.000 0.00 0.00 0.00 2.43
213 214 2.548057 GAGCATCGAGACTCTCCACTAG 59.452 54.545 9.60 0.00 0.00 2.57
214 215 2.171659 AGAGCATCGAGACTCTCCACTA 59.828 50.000 12.88 0.00 38.98 2.74
215 216 1.064758 AGAGCATCGAGACTCTCCACT 60.065 52.381 12.88 0.00 38.98 4.00
216 217 1.065401 CAGAGCATCGAGACTCTCCAC 59.935 57.143 15.17 0.00 41.31 4.02
217 218 1.065126 TCAGAGCATCGAGACTCTCCA 60.065 52.381 15.17 4.79 41.31 3.86
218 219 1.603802 CTCAGAGCATCGAGACTCTCC 59.396 57.143 15.17 0.00 41.31 3.71
219 220 2.032054 CACTCAGAGCATCGAGACTCTC 59.968 54.545 15.17 7.30 41.31 3.20
220 221 2.016318 CACTCAGAGCATCGAGACTCT 58.984 52.381 12.88 12.88 44.06 3.24
221 222 1.533756 GCACTCAGAGCATCGAGACTC 60.534 57.143 8.98 8.98 42.67 3.36
222 223 0.455410 GCACTCAGAGCATCGAGACT 59.545 55.000 0.00 0.00 42.67 3.24
223 224 0.455410 AGCACTCAGAGCATCGAGAC 59.545 55.000 0.00 0.00 42.67 3.36
224 225 1.133982 GAAGCACTCAGAGCATCGAGA 59.866 52.381 0.00 0.00 42.67 4.04
225 226 1.135170 TGAAGCACTCAGAGCATCGAG 60.135 52.381 0.00 0.00 42.67 4.04
226 227 0.890683 TGAAGCACTCAGAGCATCGA 59.109 50.000 0.00 0.00 42.67 3.59
227 228 1.593469 CATGAAGCACTCAGAGCATCG 59.407 52.381 0.00 0.00 42.67 3.84
228 229 1.331138 GCATGAAGCACTCAGAGCATC 59.669 52.381 0.00 0.00 44.79 3.91
229 230 1.380524 GCATGAAGCACTCAGAGCAT 58.619 50.000 0.00 0.00 44.79 3.79
230 231 2.850439 GCATGAAGCACTCAGAGCA 58.150 52.632 0.00 0.00 44.79 4.26
299 300 9.006839 CGATACATAACTTACAGTGGTAGGATA 57.993 37.037 0.00 0.00 31.50 2.59
300 301 7.722728 TCGATACATAACTTACAGTGGTAGGAT 59.277 37.037 0.00 0.00 31.50 3.24
301 302 7.056006 TCGATACATAACTTACAGTGGTAGGA 58.944 38.462 0.00 0.00 31.50 2.94
302 303 7.268199 TCGATACATAACTTACAGTGGTAGG 57.732 40.000 0.00 0.00 33.14 3.18
303 304 7.646922 GGTTCGATACATAACTTACAGTGGTAG 59.353 40.741 0.00 0.00 0.00 3.18
304 305 7.483307 GGTTCGATACATAACTTACAGTGGTA 58.517 38.462 0.00 0.00 0.00 3.25
305 306 6.335777 GGTTCGATACATAACTTACAGTGGT 58.664 40.000 0.00 0.00 0.00 4.16
306 307 5.457799 CGGTTCGATACATAACTTACAGTGG 59.542 44.000 0.00 0.00 0.00 4.00
307 308 6.020916 CACGGTTCGATACATAACTTACAGTG 60.021 42.308 0.00 0.00 0.00 3.66
308 309 6.032094 CACGGTTCGATACATAACTTACAGT 58.968 40.000 0.00 0.00 0.00 3.55
309 310 6.260377 TCACGGTTCGATACATAACTTACAG 58.740 40.000 0.00 0.00 0.00 2.74
310 311 6.093909 TCTCACGGTTCGATACATAACTTACA 59.906 38.462 0.00 0.00 0.00 2.41
311 312 6.489675 TCTCACGGTTCGATACATAACTTAC 58.510 40.000 0.00 0.00 0.00 2.34
312 313 6.682423 TCTCACGGTTCGATACATAACTTA 57.318 37.500 0.00 0.00 0.00 2.24
313 314 5.571784 TCTCACGGTTCGATACATAACTT 57.428 39.130 0.00 0.00 0.00 2.66
314 315 5.298527 TGATCTCACGGTTCGATACATAACT 59.701 40.000 0.00 0.00 0.00 2.24
315 316 5.516996 TGATCTCACGGTTCGATACATAAC 58.483 41.667 0.00 0.00 0.00 1.89
316 317 5.761165 TGATCTCACGGTTCGATACATAA 57.239 39.130 0.00 0.00 0.00 1.90
317 318 5.761165 TTGATCTCACGGTTCGATACATA 57.239 39.130 0.00 0.00 0.00 2.29
318 319 4.649088 TTGATCTCACGGTTCGATACAT 57.351 40.909 0.00 0.00 0.00 2.29
319 320 4.443913 TTTGATCTCACGGTTCGATACA 57.556 40.909 0.00 0.00 0.00 2.29
320 321 4.259850 GCTTTTGATCTCACGGTTCGATAC 60.260 45.833 0.00 0.00 0.00 2.24
321 322 3.863424 GCTTTTGATCTCACGGTTCGATA 59.137 43.478 0.00 0.00 0.00 2.92
322 323 2.673368 GCTTTTGATCTCACGGTTCGAT 59.327 45.455 0.00 0.00 0.00 3.59
323 324 2.066262 GCTTTTGATCTCACGGTTCGA 58.934 47.619 0.00 0.00 0.00 3.71
324 325 1.798223 TGCTTTTGATCTCACGGTTCG 59.202 47.619 0.00 0.00 0.00 3.95
325 326 3.896648 TTGCTTTTGATCTCACGGTTC 57.103 42.857 0.00 0.00 0.00 3.62
326 327 3.882888 TCTTTGCTTTTGATCTCACGGTT 59.117 39.130 0.00 0.00 0.00 4.44
327 328 3.476552 TCTTTGCTTTTGATCTCACGGT 58.523 40.909 0.00 0.00 0.00 4.83
328 329 4.488126 TTCTTTGCTTTTGATCTCACGG 57.512 40.909 0.00 0.00 0.00 4.94
329 330 8.420189 GTTTATTTCTTTGCTTTTGATCTCACG 58.580 33.333 0.00 0.00 0.00 4.35
330 331 9.248291 TGTTTATTTCTTTGCTTTTGATCTCAC 57.752 29.630 0.00 0.00 0.00 3.51
331 332 9.248291 GTGTTTATTTCTTTGCTTTTGATCTCA 57.752 29.630 0.00 0.00 0.00 3.27
332 333 9.248291 TGTGTTTATTTCTTTGCTTTTGATCTC 57.752 29.630 0.00 0.00 0.00 2.75
333 334 9.768662 ATGTGTTTATTTCTTTGCTTTTGATCT 57.231 25.926 0.00 0.00 0.00 2.75
337 338 9.862585 GGTTATGTGTTTATTTCTTTGCTTTTG 57.137 29.630 0.00 0.00 0.00 2.44
338 339 8.760569 CGGTTATGTGTTTATTTCTTTGCTTTT 58.239 29.630 0.00 0.00 0.00 2.27
339 340 7.923878 ACGGTTATGTGTTTATTTCTTTGCTTT 59.076 29.630 0.00 0.00 0.00 3.51
340 341 7.430441 ACGGTTATGTGTTTATTTCTTTGCTT 58.570 30.769 0.00 0.00 0.00 3.91
341 342 6.977213 ACGGTTATGTGTTTATTTCTTTGCT 58.023 32.000 0.00 0.00 0.00 3.91
342 343 6.858993 TGACGGTTATGTGTTTATTTCTTTGC 59.141 34.615 0.00 0.00 0.00 3.68
343 344 7.059033 CGTGACGGTTATGTGTTTATTTCTTTG 59.941 37.037 0.00 0.00 0.00 2.77
344 345 7.073265 CGTGACGGTTATGTGTTTATTTCTTT 58.927 34.615 0.00 0.00 0.00 2.52
345 346 6.347888 CCGTGACGGTTATGTGTTTATTTCTT 60.348 38.462 17.28 0.00 42.73 2.52
346 347 5.121142 CCGTGACGGTTATGTGTTTATTTCT 59.879 40.000 17.28 0.00 42.73 2.52
347 348 5.318349 CCGTGACGGTTATGTGTTTATTTC 58.682 41.667 17.28 0.00 42.73 2.17
348 349 5.285798 CCGTGACGGTTATGTGTTTATTT 57.714 39.130 17.28 0.00 42.73 1.40
349 350 4.932268 CCGTGACGGTTATGTGTTTATT 57.068 40.909 17.28 0.00 42.73 1.40
363 364 3.353836 CCAAACAGGGCCGTGACG 61.354 66.667 31.22 17.38 0.00 4.35
364 365 1.966451 CTCCAAACAGGGCCGTGAC 60.966 63.158 31.22 0.00 38.24 3.67
365 366 1.990160 AACTCCAAACAGGGCCGTGA 61.990 55.000 31.22 8.01 38.24 4.35
366 367 0.250553 TAACTCCAAACAGGGCCGTG 60.251 55.000 23.61 23.61 38.24 4.94
367 368 0.696501 ATAACTCCAAACAGGGCCGT 59.303 50.000 0.00 0.00 38.24 5.68
368 369 1.834188 AATAACTCCAAACAGGGCCG 58.166 50.000 0.00 0.00 38.24 6.13
369 370 4.341235 GGATAAATAACTCCAAACAGGGCC 59.659 45.833 0.00 0.00 38.24 5.80
370 371 4.953579 TGGATAAATAACTCCAAACAGGGC 59.046 41.667 0.00 0.00 38.59 5.19
378 379 7.671819 TGTGATGGTTTTGGATAAATAACTCCA 59.328 33.333 0.00 0.00 39.78 3.86
409 410 4.825634 GGTATCAAATTGTTACCCTAGCCC 59.174 45.833 18.04 0.00 36.94 5.19
424 425 5.417580 GCCCTAACTCAAATGTGGTATCAAA 59.582 40.000 0.00 0.00 0.00 2.69
507 509 2.476619 CTGATTCGCTGTTTTCACGACT 59.523 45.455 0.00 0.00 34.86 4.18
527 529 3.580319 GGTGGGCCCAACTGGTCT 61.580 66.667 33.79 0.00 39.39 3.85
622 626 0.858598 TTGGGGAGAGAGAGGGGGTA 60.859 60.000 0.00 0.00 0.00 3.69
654 669 4.882396 TGTGTCGGGGTGGGTGGA 62.882 66.667 0.00 0.00 0.00 4.02
678 693 3.499929 GCGGCTAGCGCTGGATACA 62.500 63.158 26.32 0.00 42.92 2.29
733 820 0.898789 AGGGAAGAAGCTCGTCGGAA 60.899 55.000 0.00 0.00 0.00 4.30
769 856 2.598565 CACGGGGAGAATGATAGGAGA 58.401 52.381 0.00 0.00 0.00 3.71
879 973 1.323271 TGTCTTGCTAGGAGGCTCCG 61.323 60.000 27.11 15.51 42.75 4.63
898 992 2.254152 TGGAGAGGTCAAGCATAGGT 57.746 50.000 0.00 0.00 0.00 3.08
942 1228 4.335647 CGTTGCAGGCTGGAGGGT 62.336 66.667 17.64 0.00 0.00 4.34
957 1243 3.141488 CTCCCTGCTAGTCGCCGT 61.141 66.667 0.00 0.00 38.05 5.68
1064 1671 3.770040 CCTCGTGGACATGGGCGA 61.770 66.667 0.00 0.41 34.57 5.54
1071 1678 3.555324 TTGCCAGCCTCGTGGACA 61.555 61.111 7.92 0.00 40.44 4.02
1146 1755 4.175489 CGCTCCATCGACGACGGT 62.175 66.667 10.13 0.00 40.21 4.83
1202 1826 1.078143 GGCATGCTCCTTCGTCCTT 60.078 57.895 18.92 0.00 0.00 3.36
1209 1833 1.841302 TTCCTCACGGCATGCTCCTT 61.841 55.000 18.92 0.00 0.00 3.36
1226 1850 3.165606 CTGGTCATGCTCCAGGTTC 57.834 57.895 21.35 0.00 46.03 3.62
1243 1867 1.658686 CGTAGCCTCCGTGAGCTTCT 61.659 60.000 0.00 0.00 40.56 2.85
1251 1875 2.404995 CGAAGACCGTAGCCTCCGT 61.405 63.158 0.00 0.00 0.00 4.69
1313 1938 1.617018 CCCTCCTGTGCTCGATCCAA 61.617 60.000 0.00 0.00 0.00 3.53
1416 2042 1.453015 AAAGTGCACTTGACCGCCA 60.453 52.632 31.73 0.00 36.12 5.69
1453 2097 2.196997 TAAAGGGCGCTGACCTGCAT 62.197 55.000 7.64 0.00 42.44 3.96
1569 2226 1.174078 TGGCATGCTTGTGTGGACAG 61.174 55.000 18.92 0.00 32.26 3.51
1653 2319 6.266558 ACCAATTTTGTGCCTAATGACTAACA 59.733 34.615 0.00 0.00 0.00 2.41
1722 2388 2.902608 ACCACCACACTTGAGGATAGA 58.097 47.619 0.00 0.00 0.00 1.98
1726 2392 2.374184 CAAAACCACCACACTTGAGGA 58.626 47.619 0.00 0.00 0.00 3.71
1768 2434 0.251077 GGCTGGAGATGCCCTTATGG 60.251 60.000 0.00 0.00 44.32 2.74
1769 2435 3.336122 GGCTGGAGATGCCCTTATG 57.664 57.895 0.00 0.00 44.32 1.90
1795 2461 1.681264 GATTTTTATGCGTCCTGGGGG 59.319 52.381 0.00 0.00 0.00 5.40
1796 2462 1.333619 CGATTTTTATGCGTCCTGGGG 59.666 52.381 0.00 0.00 0.00 4.96
1797 2463 1.268539 GCGATTTTTATGCGTCCTGGG 60.269 52.381 0.00 0.00 0.00 4.45
1798 2464 1.268539 GGCGATTTTTATGCGTCCTGG 60.269 52.381 0.00 0.00 0.00 4.45
1799 2465 1.268539 GGGCGATTTTTATGCGTCCTG 60.269 52.381 0.00 0.00 45.64 3.86
1800 2466 1.021968 GGGCGATTTTTATGCGTCCT 58.978 50.000 0.00 0.00 45.64 3.85
1801 2467 3.544615 GGGCGATTTTTATGCGTCC 57.455 52.632 0.00 0.00 42.93 4.79
1802 2468 0.030235 GGGGGCGATTTTTATGCGTC 59.970 55.000 0.00 0.00 0.00 5.19
1803 2469 0.395173 AGGGGGCGATTTTTATGCGT 60.395 50.000 0.00 0.00 0.00 5.24
1804 2470 0.030638 CAGGGGGCGATTTTTATGCG 59.969 55.000 0.00 0.00 0.00 4.73
1805 2471 0.389025 CCAGGGGGCGATTTTTATGC 59.611 55.000 0.00 0.00 0.00 3.14
1806 2472 1.039856 CCCAGGGGGCGATTTTTATG 58.960 55.000 0.00 0.00 35.35 1.90
1807 2473 3.531821 CCCAGGGGGCGATTTTTAT 57.468 52.632 0.00 0.00 35.35 1.40
1826 2492 4.884257 TTGTATCGCCGGCTCGCC 62.884 66.667 26.68 10.48 0.00 5.54
1827 2493 2.658707 GATTGTATCGCCGGCTCGC 61.659 63.158 26.68 12.33 0.00 5.03
1828 2494 2.365068 CGATTGTATCGCCGGCTCG 61.365 63.158 26.68 20.74 46.55 5.03
1829 2495 3.538841 CGATTGTATCGCCGGCTC 58.461 61.111 26.68 12.39 46.55 4.70
1837 2503 1.961277 CCCCAGCGCCGATTGTATC 60.961 63.158 2.29 0.00 0.00 2.24
1838 2504 2.111043 CCCCAGCGCCGATTGTAT 59.889 61.111 2.29 0.00 0.00 2.29
1839 2505 4.169696 CCCCCAGCGCCGATTGTA 62.170 66.667 2.29 0.00 0.00 2.41
1857 2523 4.383602 CGACTGGGCGCAAAACCG 62.384 66.667 10.83 2.69 0.00 4.44
1858 2524 3.249973 GACGACTGGGCGCAAAACC 62.250 63.158 10.83 0.47 33.86 3.27
1859 2525 2.251371 GACGACTGGGCGCAAAAC 59.749 61.111 10.83 0.00 33.86 2.43
1860 2526 3.342627 CGACGACTGGGCGCAAAA 61.343 61.111 10.83 0.00 33.86 2.44
1890 2556 3.825611 CAATTTCGGCGCCTGGGG 61.826 66.667 26.68 9.07 0.00 4.96
1891 2557 3.825611 CCAATTTCGGCGCCTGGG 61.826 66.667 26.68 8.93 0.00 4.45
1892 2558 4.496927 GCCAATTTCGGCGCCTGG 62.497 66.667 26.68 24.98 43.52 4.45
1899 2565 1.543802 TGCAAAGTAGGCCAATTTCGG 59.456 47.619 5.01 0.00 0.00 4.30
1900 2566 2.867429 CTGCAAAGTAGGCCAATTTCG 58.133 47.619 5.01 0.00 0.00 3.46
1901 2567 2.610433 GCTGCAAAGTAGGCCAATTTC 58.390 47.619 5.01 0.00 0.00 2.17
1902 2568 1.276138 GGCTGCAAAGTAGGCCAATTT 59.724 47.619 5.01 0.00 43.59 1.82
1903 2569 0.897621 GGCTGCAAAGTAGGCCAATT 59.102 50.000 5.01 0.00 43.59 2.32
1904 2570 2.583472 GGCTGCAAAGTAGGCCAAT 58.417 52.632 5.01 0.00 43.59 3.16
1905 2571 4.095590 GGCTGCAAAGTAGGCCAA 57.904 55.556 5.01 0.00 43.59 4.52
1908 2574 0.897621 AATTGGGCTGCAAAGTAGGC 59.102 50.000 0.50 0.15 39.76 3.93
1909 2575 2.415893 CGAAATTGGGCTGCAAAGTAGG 60.416 50.000 0.50 0.00 0.00 3.18
1910 2576 2.415893 CCGAAATTGGGCTGCAAAGTAG 60.416 50.000 0.50 0.00 0.00 2.57
1911 2577 1.543802 CCGAAATTGGGCTGCAAAGTA 59.456 47.619 0.50 0.00 0.00 2.24
1912 2578 0.318120 CCGAAATTGGGCTGCAAAGT 59.682 50.000 0.50 0.00 0.00 2.66
1913 2579 3.126729 CCGAAATTGGGCTGCAAAG 57.873 52.632 0.50 0.00 0.00 2.77
1921 2587 2.292292 CCCTTTATACGCCGAAATTGGG 59.708 50.000 0.00 0.00 0.00 4.12
1922 2588 2.287368 GCCCTTTATACGCCGAAATTGG 60.287 50.000 0.00 0.00 0.00 3.16
1923 2589 2.287368 GGCCCTTTATACGCCGAAATTG 60.287 50.000 0.00 0.00 31.92 2.32
1924 2590 1.951602 GGCCCTTTATACGCCGAAATT 59.048 47.619 0.00 0.00 31.92 1.82
1925 2591 1.601166 GGCCCTTTATACGCCGAAAT 58.399 50.000 0.00 0.00 31.92 2.17
1926 2592 0.464193 GGGCCCTTTATACGCCGAAA 60.464 55.000 17.04 0.00 43.99 3.46
1927 2593 1.146707 GGGCCCTTTATACGCCGAA 59.853 57.895 17.04 0.00 43.99 4.30
1928 2594 1.412453 ATGGGCCCTTTATACGCCGA 61.412 55.000 25.70 0.00 43.99 5.54
1929 2595 0.322322 TATGGGCCCTTTATACGCCG 59.678 55.000 25.70 0.00 43.99 6.46
1930 2596 2.365582 CATATGGGCCCTTTATACGCC 58.634 52.381 25.70 0.00 42.23 5.68
1931 2597 2.365582 CCATATGGGCCCTTTATACGC 58.634 52.381 25.70 0.00 0.00 4.42
1944 2610 1.407437 GGCCTATTCTCGCCCATATGG 60.407 57.143 15.41 15.41 39.39 2.74
1945 2611 2.029838 GGCCTATTCTCGCCCATATG 57.970 55.000 0.00 0.00 39.39 1.78
1951 2617 2.633488 GAATATGGGCCTATTCTCGCC 58.367 52.381 7.02 0.00 44.92 5.54
1952 2618 2.271800 CGAATATGGGCCTATTCTCGC 58.728 52.381 22.26 7.55 36.42 5.03
1953 2619 2.893637 CCGAATATGGGCCTATTCTCG 58.106 52.381 19.45 19.45 36.42 4.04
1954 2620 2.633488 GCCGAATATGGGCCTATTCTC 58.367 52.381 22.26 3.45 44.97 2.87
1955 2621 2.789409 GCCGAATATGGGCCTATTCT 57.211 50.000 22.26 0.00 44.97 2.40
1963 2629 0.661020 GAAACCACGCCGAATATGGG 59.339 55.000 0.00 0.00 37.86 4.00
1964 2630 0.303493 CGAAACCACGCCGAATATGG 59.697 55.000 0.00 0.00 39.57 2.74
1965 2631 3.798506 CGAAACCACGCCGAATATG 57.201 52.632 0.00 0.00 0.00 1.78
1974 2640 2.654912 GAGACACGGCGAAACCACG 61.655 63.158 16.62 0.00 39.03 4.94
1975 2641 2.654912 CGAGACACGGCGAAACCAC 61.655 63.158 16.62 0.00 39.03 4.16
1976 2642 2.355363 CGAGACACGGCGAAACCA 60.355 61.111 16.62 0.00 39.03 3.67
1977 2643 2.049802 TCGAGACACGGCGAAACC 60.050 61.111 16.62 0.00 42.82 3.27
1978 2644 3.144605 GTCGAGACACGGCGAAAC 58.855 61.111 16.62 3.69 42.82 2.78
1983 2649 1.007336 ATTGAACGTCGAGACACGGC 61.007 55.000 0.00 0.00 44.41 5.68
1984 2650 1.415374 AATTGAACGTCGAGACACGG 58.585 50.000 0.00 0.00 44.41 4.94
1985 2651 3.849708 TGATAATTGAACGTCGAGACACG 59.150 43.478 0.00 0.00 45.65 4.49
1986 2652 5.118050 TGTTGATAATTGAACGTCGAGACAC 59.882 40.000 0.00 0.00 0.00 3.67
1987 2653 5.118050 GTGTTGATAATTGAACGTCGAGACA 59.882 40.000 0.00 0.00 0.00 3.41
1988 2654 5.118050 TGTGTTGATAATTGAACGTCGAGAC 59.882 40.000 0.00 0.00 0.00 3.36
1989 2655 5.224135 TGTGTTGATAATTGAACGTCGAGA 58.776 37.500 0.00 0.00 0.00 4.04
1990 2656 5.509605 TGTGTTGATAATTGAACGTCGAG 57.490 39.130 0.00 0.00 0.00 4.04
1991 2657 5.908916 TTGTGTTGATAATTGAACGTCGA 57.091 34.783 0.00 0.00 0.00 4.20
1992 2658 8.820628 ATAATTGTGTTGATAATTGAACGTCG 57.179 30.769 0.00 0.00 0.00 5.12
2053 2719 9.915629 TTTGTTGTTGTACTATTTTGTTGAAGT 57.084 25.926 0.00 0.00 0.00 3.01
2108 2774 9.325150 CGTGTGATGAAATACGAGTTTTTATTT 57.675 29.630 0.00 0.00 38.72 1.40
2109 2775 7.960738 CCGTGTGATGAAATACGAGTTTTTATT 59.039 33.333 0.00 0.00 38.72 1.40
2110 2776 7.461107 CCGTGTGATGAAATACGAGTTTTTAT 58.539 34.615 0.00 0.00 38.72 1.40
2111 2777 6.619018 GCCGTGTGATGAAATACGAGTTTTTA 60.619 38.462 0.00 0.00 38.72 1.52
2112 2778 5.685841 CCGTGTGATGAAATACGAGTTTTT 58.314 37.500 0.00 0.00 38.72 1.94
2113 2779 4.378046 GCCGTGTGATGAAATACGAGTTTT 60.378 41.667 0.00 0.00 38.72 2.43
2114 2780 3.124636 GCCGTGTGATGAAATACGAGTTT 59.875 43.478 0.00 0.00 38.72 2.66
2115 2781 2.671396 GCCGTGTGATGAAATACGAGTT 59.329 45.455 0.00 0.00 38.72 3.01
2116 2782 2.268298 GCCGTGTGATGAAATACGAGT 58.732 47.619 0.00 0.00 38.72 4.18
2117 2783 1.255342 CGCCGTGTGATGAAATACGAG 59.745 52.381 0.00 0.00 38.72 4.18
2118 2784 1.273688 CGCCGTGTGATGAAATACGA 58.726 50.000 0.00 0.00 38.72 3.43
2119 2785 0.996462 ACGCCGTGTGATGAAATACG 59.004 50.000 0.00 0.00 36.39 3.06
2120 2786 1.326548 GGACGCCGTGTGATGAAATAC 59.673 52.381 0.00 0.00 0.00 1.89
2121 2787 1.647346 GGACGCCGTGTGATGAAATA 58.353 50.000 0.00 0.00 0.00 1.40
2122 2788 1.024579 GGGACGCCGTGTGATGAAAT 61.025 55.000 0.00 0.00 0.00 2.17
2123 2789 1.669760 GGGACGCCGTGTGATGAAA 60.670 57.895 0.00 0.00 0.00 2.69
2124 2790 2.047655 GGGACGCCGTGTGATGAA 60.048 61.111 0.00 0.00 0.00 2.57
2125 2791 4.077184 GGGGACGCCGTGTGATGA 62.077 66.667 0.00 0.00 0.00 2.92
2131 2797 4.760047 CTCAAGGGGGACGCCGTG 62.760 72.222 13.62 13.62 44.92 4.94
2135 2801 4.475135 GAGGCTCAAGGGGGACGC 62.475 72.222 10.25 0.00 43.76 5.19
2136 2802 3.787001 GGAGGCTCAAGGGGGACG 61.787 72.222 17.69 0.00 0.00 4.79
2137 2803 0.694444 TATGGAGGCTCAAGGGGGAC 60.694 60.000 17.69 0.00 0.00 4.46
2138 2804 0.400525 CTATGGAGGCTCAAGGGGGA 60.401 60.000 17.69 0.00 0.00 4.81
2139 2805 1.422161 CCTATGGAGGCTCAAGGGGG 61.422 65.000 17.69 7.53 35.54 5.40
2140 2806 2.149530 CCTATGGAGGCTCAAGGGG 58.850 63.158 17.69 7.65 35.54 4.79
2150 2816 4.283978 AGATCTGATTGAGCACCTATGGAG 59.716 45.833 0.00 0.00 32.67 3.86
2151 2817 4.229639 AGATCTGATTGAGCACCTATGGA 58.770 43.478 0.00 0.00 32.67 3.41
2152 2818 4.620589 AGATCTGATTGAGCACCTATGG 57.379 45.455 0.00 0.00 32.67 2.74
2153 2819 6.289834 AGAAAGATCTGATTGAGCACCTATG 58.710 40.000 0.00 0.00 33.59 2.23
2154 2820 6.497624 AGAAAGATCTGATTGAGCACCTAT 57.502 37.500 0.00 0.00 33.59 2.57
2155 2821 5.946942 AGAAAGATCTGATTGAGCACCTA 57.053 39.130 0.00 0.00 33.59 3.08
2156 2822 4.840716 AGAAAGATCTGATTGAGCACCT 57.159 40.909 0.00 0.00 33.59 4.00
2168 2834 4.335874 GCATCATCAACTGCAGAAAGATCT 59.664 41.667 23.35 7.06 38.28 2.75
2169 2835 4.095932 TGCATCATCAACTGCAGAAAGATC 59.904 41.667 23.35 8.57 43.11 2.75
2170 2836 4.014406 TGCATCATCAACTGCAGAAAGAT 58.986 39.130 23.35 16.48 43.11 2.40
2171 2837 3.414269 TGCATCATCAACTGCAGAAAGA 58.586 40.909 23.35 14.88 43.11 2.52
2172 2838 3.842732 TGCATCATCAACTGCAGAAAG 57.157 42.857 23.35 9.59 43.11 2.62
2177 2843 2.030628 CACAAGTGCATCATCAACTGCA 60.031 45.455 0.00 0.00 45.60 4.41
2178 2844 2.592194 CACAAGTGCATCATCAACTGC 58.408 47.619 0.00 0.00 38.87 4.40
2179 2845 2.094906 CCCACAAGTGCATCATCAACTG 60.095 50.000 0.00 0.00 0.00 3.16
2180 2846 2.165167 CCCACAAGTGCATCATCAACT 58.835 47.619 0.00 0.00 0.00 3.16
2181 2847 1.888512 ACCCACAAGTGCATCATCAAC 59.111 47.619 0.00 0.00 0.00 3.18
2182 2848 2.161855 GACCCACAAGTGCATCATCAA 58.838 47.619 0.00 0.00 0.00 2.57
2183 2849 1.352017 AGACCCACAAGTGCATCATCA 59.648 47.619 0.00 0.00 0.00 3.07
2184 2850 2.012673 GAGACCCACAAGTGCATCATC 58.987 52.381 0.00 0.00 0.00 2.92
2185 2851 1.676916 CGAGACCCACAAGTGCATCAT 60.677 52.381 0.00 0.00 0.00 2.45
2186 2852 0.320683 CGAGACCCACAAGTGCATCA 60.321 55.000 0.00 0.00 0.00 3.07
2187 2853 1.021390 CCGAGACCCACAAGTGCATC 61.021 60.000 0.00 0.00 0.00 3.91
2188 2854 1.003355 CCGAGACCCACAAGTGCAT 60.003 57.895 0.00 0.00 0.00 3.96
2189 2855 1.480212 ATCCGAGACCCACAAGTGCA 61.480 55.000 0.00 0.00 0.00 4.57
2190 2856 0.741221 GATCCGAGACCCACAAGTGC 60.741 60.000 0.00 0.00 0.00 4.40
2191 2857 0.898320 AGATCCGAGACCCACAAGTG 59.102 55.000 0.00 0.00 0.00 3.16
2192 2858 1.187087 GAGATCCGAGACCCACAAGT 58.813 55.000 0.00 0.00 0.00 3.16
2193 2859 0.461961 GGAGATCCGAGACCCACAAG 59.538 60.000 0.00 0.00 0.00 3.16
2194 2860 0.041238 AGGAGATCCGAGACCCACAA 59.959 55.000 0.00 0.00 42.08 3.33
2195 2861 0.684479 CAGGAGATCCGAGACCCACA 60.684 60.000 0.00 0.00 42.08 4.17
2196 2862 0.395862 TCAGGAGATCCGAGACCCAC 60.396 60.000 0.00 0.00 42.08 4.61
2197 2863 0.395862 GTCAGGAGATCCGAGACCCA 60.396 60.000 13.38 0.00 42.08 4.51
2198 2864 1.448922 CGTCAGGAGATCCGAGACCC 61.449 65.000 16.67 0.00 40.44 4.46
2199 2865 2.026522 CGTCAGGAGATCCGAGACC 58.973 63.158 16.67 0.00 40.44 3.85
2200 2866 1.357334 GCGTCAGGAGATCCGAGAC 59.643 63.158 14.02 14.02 42.08 3.36
2201 2867 0.466372 ATGCGTCAGGAGATCCGAGA 60.466 55.000 0.00 0.00 42.08 4.04
2202 2868 1.068885 GTATGCGTCAGGAGATCCGAG 60.069 57.143 0.00 0.00 42.08 4.63
2203 2869 0.952280 GTATGCGTCAGGAGATCCGA 59.048 55.000 0.00 0.00 42.08 4.55
2204 2870 0.955178 AGTATGCGTCAGGAGATCCG 59.045 55.000 0.00 0.00 42.08 4.18
2205 2871 2.430546 CAGTATGCGTCAGGAGATCC 57.569 55.000 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.