Multiple sequence alignment - TraesCS7A01G120700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G120700 chr7A 100.000 4868 0 0 1 4868 77705816 77710683 0.000000e+00 8990.0
1 TraesCS7A01G120700 chr7A 98.192 2157 29 7 871 3020 77731729 77733882 0.000000e+00 3759.0
2 TraesCS7A01G120700 chr7A 86.228 639 68 8 787 1417 78080879 78080253 0.000000e+00 675.0
3 TraesCS7A01G120700 chr7A 83.182 773 71 28 787 1521 77915007 77915758 0.000000e+00 652.0
4 TraesCS7A01G120700 chr7A 82.314 605 65 27 3732 4310 77733787 77734375 2.040000e-133 486.0
5 TraesCS7A01G120700 chr7A 78.935 432 29 27 3231 3631 77733351 77733751 2.260000e-58 237.0
6 TraesCS7A01G120700 chr7A 81.013 316 40 13 3728 4030 77917111 77917419 2.930000e-57 233.0
7 TraesCS7A01G120700 chr7A 78.291 433 31 28 3231 3631 77708302 77708703 2.280000e-53 220.0
8 TraesCS7A01G120700 chr7A 80.399 301 49 8 3732 4030 78224748 78225040 2.280000e-53 220.0
9 TraesCS7A01G120700 chr7A 80.263 304 47 9 1657 1954 84026236 84025940 2.950000e-52 217.0
10 TraesCS7A01G120700 chr7A 83.871 124 10 5 3351 3471 78133615 78133499 5.150000e-20 110.0
11 TraesCS7A01G120700 chr7A 89.655 87 5 3 4505 4590 77734479 77734562 1.850000e-19 108.0
12 TraesCS7A01G120700 chr7A 95.385 65 3 0 2238 2302 77708906 77708970 2.400000e-18 104.0
13 TraesCS7A01G120700 chr7A 83.051 118 15 4 2050 2167 78218717 78218829 8.620000e-18 102.0
14 TraesCS7A01G120700 chr7A 89.873 79 7 1 787 865 77914207 77914284 3.100000e-17 100.0
15 TraesCS7A01G120700 chr7A 81.679 131 8 7 2614 2734 78133623 78133499 1.440000e-15 95.3
16 TraesCS7A01G120700 chr7A 86.207 87 7 3 282 367 669663351 669663433 6.710000e-14 89.8
17 TraesCS7A01G120700 chr7D 94.568 2430 81 20 816 3232 73212919 73215310 0.000000e+00 3709.0
18 TraesCS7A01G120700 chr7D 95.007 2083 71 16 950 3020 73218107 73220168 0.000000e+00 3240.0
19 TraesCS7A01G120700 chr7D 95.980 1368 19 10 2271 3635 73180702 73182036 0.000000e+00 2189.0
20 TraesCS7A01G120700 chr7D 95.941 1158 36 2 3717 4865 73215856 73217011 0.000000e+00 1868.0
21 TraesCS7A01G120700 chr7D 93.682 1187 36 19 3717 4868 73182035 73183217 0.000000e+00 1740.0
22 TraesCS7A01G120700 chr7D 91.162 792 40 13 787 1573 73178014 73178780 0.000000e+00 1048.0
23 TraesCS7A01G120700 chr7D 83.204 774 69 28 787 1521 73367760 73368511 0.000000e+00 652.0
24 TraesCS7A01G120700 chr7D 97.872 376 5 1 3229 3604 73215339 73215711 0.000000e+00 647.0
25 TraesCS7A01G120700 chr7D 84.588 571 60 12 1666 2233 73180160 73180705 4.290000e-150 542.0
26 TraesCS7A01G120700 chr7D 92.019 213 16 1 4199 4410 73220477 73220689 1.020000e-76 298.0
27 TraesCS7A01G120700 chr7D 92.632 190 13 1 13 202 178017951 178017763 6.210000e-69 272.0
28 TraesCS7A01G120700 chr7D 75.315 555 108 22 836 1387 68801524 68802052 6.300000e-59 239.0
29 TraesCS7A01G120700 chr7D 81.063 301 47 8 3732 4030 74393779 74394071 1.050000e-56 231.0
30 TraesCS7A01G120700 chr7D 77.069 423 81 11 973 1390 66517136 66516725 3.790000e-56 230.0
31 TraesCS7A01G120700 chr7D 78.372 430 34 26 3231 3629 73219634 73220035 1.760000e-54 224.0
32 TraesCS7A01G120700 chr7D 78.610 374 28 23 3283 3631 73180944 73181290 2.970000e-47 200.0
33 TraesCS7A01G120700 chr7D 93.798 129 7 1 375 503 73175702 73175829 4.970000e-45 193.0
34 TraesCS7A01G120700 chr7D 89.189 148 8 2 224 367 180841401 180841544 1.390000e-40 178.0
35 TraesCS7A01G120700 chr7D 96.703 91 2 1 494 584 73177580 73177669 3.040000e-32 150.0
36 TraesCS7A01G120700 chr7D 91.089 101 5 3 4492 4590 73220689 73220787 3.060000e-27 134.0
37 TraesCS7A01G120700 chr7D 97.015 67 2 0 2238 2304 73215169 73215235 3.980000e-21 113.0
38 TraesCS7A01G120700 chr7D 95.522 67 3 0 2238 2304 73181492 73181558 1.850000e-19 108.0
39 TraesCS7A01G120700 chr7D 85.000 100 13 2 2745 2843 239730205 239730107 3.100000e-17 100.0
40 TraesCS7A01G120700 chr7B 95.858 1159 42 3 3713 4868 15937253 15938408 0.000000e+00 1869.0
41 TraesCS7A01G120700 chr7B 90.392 739 47 11 873 1604 15935300 15936021 0.000000e+00 950.0
42 TraesCS7A01G120700 chr7B 90.268 411 12 2 3229 3639 15936846 15937228 3.360000e-141 512.0
43 TraesCS7A01G120700 chr7B 76.259 556 108 15 836 1387 10208331 10208866 1.730000e-69 274.0
44 TraesCS7A01G120700 chr7B 94.798 173 9 0 3060 3232 15936645 15936817 2.230000e-68 270.0
45 TraesCS7A01G120700 chr7B 77.857 420 77 11 973 1387 9811461 9811869 3.760000e-61 246.0
46 TraesCS7A01G120700 chr7B 82.946 258 40 4 3775 4030 16526296 16526551 3.790000e-56 230.0
47 TraesCS7A01G120700 chr7B 91.216 148 5 2 224 367 180010474 180010331 1.380000e-45 195.0
48 TraesCS7A01G120700 chr7B 88.806 134 10 4 2108 2236 15936512 15936645 5.040000e-35 159.0
49 TraesCS7A01G120700 chr7B 75.157 318 38 24 3351 3635 16828156 16828465 1.430000e-20 111.0
50 TraesCS7A01G120700 chr7B 80.769 130 8 6 2615 2734 16828149 16828271 8.680000e-13 86.1
51 TraesCS7A01G120700 chr2B 81.586 706 93 25 854 1544 55210340 55209657 2.560000e-152 549.0
52 TraesCS7A01G120700 chr2B 81.230 309 46 11 2720 3020 55512939 55512635 6.300000e-59 239.0
53 TraesCS7A01G120700 chr2B 84.979 233 27 7 2792 3020 55201899 55201671 3.790000e-56 230.0
54 TraesCS7A01G120700 chr2B 84.483 232 30 6 2792 3021 55208570 55208343 1.760000e-54 224.0
55 TraesCS7A01G120700 chr2B 74.151 530 67 34 2521 3019 54885942 54885452 6.520000e-34 156.0
56 TraesCS7A01G120700 chr2B 79.839 124 22 3 2720 2842 54886076 54885955 2.410000e-13 87.9
57 TraesCS7A01G120700 chr4D 94.527 201 11 0 1 201 352773077 352772877 1.320000e-80 311.0
58 TraesCS7A01G120700 chr4D 89.922 129 4 2 247 367 435974173 435974046 1.810000e-34 158.0
59 TraesCS7A01G120700 chr5D 93.532 201 13 0 1 201 10750897 10750697 2.850000e-77 300.0
60 TraesCS7A01G120700 chr5D 92.157 102 6 2 3617 3718 509426570 509426471 5.080000e-30 143.0
61 TraesCS7A01G120700 chr2D 93.333 195 11 2 7 201 29173890 29173698 2.220000e-73 287.0
62 TraesCS7A01G120700 chr2D 93.333 195 11 2 6 200 245377206 245377398 2.220000e-73 287.0
63 TraesCS7A01G120700 chr2D 76.604 530 63 35 2521 3019 33047373 33046874 8.150000e-58 235.0
64 TraesCS7A01G120700 chr2D 91.346 104 6 3 3616 3718 29153285 29153184 6.570000e-29 139.0
65 TraesCS7A01G120700 chr3D 91.584 202 11 3 1 202 593317450 593317255 1.730000e-69 274.0
66 TraesCS7A01G120700 chr3D 91.579 190 16 0 12 201 172619843 172619654 3.740000e-66 263.0
67 TraesCS7A01G120700 chr3D 88.596 114 9 4 3629 3741 406157942 406157832 8.500000e-28 135.0
68 TraesCS7A01G120700 chr3B 91.579 190 16 0 12 201 25927886 25927697 3.740000e-66 263.0
69 TraesCS7A01G120700 chr3B 91.579 190 16 0 12 201 26406161 26405972 3.740000e-66 263.0
70 TraesCS7A01G120700 chr3B 93.204 103 4 3 3621 3720 551513872 551513974 1.090000e-31 148.0
71 TraesCS7A01G120700 chr3B 88.312 77 7 2 285 360 822228449 822228524 1.870000e-14 91.6
72 TraesCS7A01G120700 chr3B 88.312 77 7 2 285 360 822319019 822319094 1.870000e-14 91.6
73 TraesCS7A01G120700 chr3B 88.312 77 7 2 285 360 825230500 825230425 1.870000e-14 91.6
74 TraesCS7A01G120700 chr3B 97.222 36 1 0 4610 4645 632139796 632139831 1.460000e-05 62.1
75 TraesCS7A01G120700 chr1B 83.645 214 28 6 2745 2953 15262650 15262439 1.380000e-45 195.0
76 TraesCS7A01G120700 chr1B 77.955 313 34 20 3351 3635 15262807 15262502 3.900000e-36 163.0
77 TraesCS7A01G120700 chr1B 96.703 91 3 0 3630 3720 593927073 593927163 8.440000e-33 152.0
78 TraesCS7A01G120700 chr1B 83.333 96 13 3 815 908 678116436 678116342 8.680000e-13 86.1
79 TraesCS7A01G120700 chr1D 92.000 125 5 2 247 367 390437650 390437773 2.330000e-38 171.0
80 TraesCS7A01G120700 chr2A 77.742 310 42 19 2733 3021 36398635 36398332 1.080000e-36 165.0
81 TraesCS7A01G120700 chr2A 83.962 106 15 2 2739 2843 1212533 1212637 3.100000e-17 100.0
82 TraesCS7A01G120700 chr2A 83.158 95 7 9 281 367 19309117 19309210 1.450000e-10 78.7
83 TraesCS7A01G120700 chr6B 96.703 91 2 1 3632 3722 135139473 135139562 3.040000e-32 150.0
84 TraesCS7A01G120700 chr6B 88.785 107 12 0 3049 3155 56426705 56426811 1.100000e-26 132.0
85 TraesCS7A01G120700 chr4A 93.814 97 4 2 3631 3726 511040574 511040479 1.410000e-30 145.0
86 TraesCS7A01G120700 chr4A 91.262 103 7 2 3634 3736 503221577 503221677 6.570000e-29 139.0
87 TraesCS7A01G120700 chr4A 88.785 107 12 0 3049 3155 400134732 400134626 1.100000e-26 132.0
88 TraesCS7A01G120700 chr4A 88.571 105 11 1 3049 3152 237419497 237419393 5.120000e-25 126.0
89 TraesCS7A01G120700 chr6A 92.157 102 6 2 3631 3732 26632957 26632858 5.080000e-30 143.0
90 TraesCS7A01G120700 chr6A 87.963 108 13 0 3048 3155 31593043 31593150 1.420000e-25 128.0
91 TraesCS7A01G120700 chr5A 89.720 107 11 0 3049 3155 112937559 112937453 2.360000e-28 137.0
92 TraesCS7A01G120700 chr6D 88.785 107 12 0 3049 3155 30747624 30747730 1.100000e-26 132.0
93 TraesCS7A01G120700 chr6D 81.884 138 19 5 3894 4030 54481445 54481313 1.430000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G120700 chr7A 77705816 77710683 4867 False 3104.666667 8990 91.225333 1 4868 3 chr7A.!!$F4 4867
1 TraesCS7A01G120700 chr7A 77731729 77734562 2833 False 1147.500000 3759 87.274000 871 4590 4 chr7A.!!$F5 3719
2 TraesCS7A01G120700 chr7A 78080253 78080879 626 True 675.000000 675 86.228000 787 1417 1 chr7A.!!$R1 630
3 TraesCS7A01G120700 chr7A 77914207 77917419 3212 False 328.333333 652 84.689333 787 4030 3 chr7A.!!$F6 3243
4 TraesCS7A01G120700 chr7D 73212919 73220787 7868 False 1279.125000 3709 92.735375 816 4865 8 chr7D.!!$F6 4049
5 TraesCS7A01G120700 chr7D 73175702 73183217 7515 False 771.250000 2189 91.255625 375 4868 8 chr7D.!!$F5 4493
6 TraesCS7A01G120700 chr7D 73367760 73368511 751 False 652.000000 652 83.204000 787 1521 1 chr7D.!!$F2 734
7 TraesCS7A01G120700 chr7D 68801524 68802052 528 False 239.000000 239 75.315000 836 1387 1 chr7D.!!$F1 551
8 TraesCS7A01G120700 chr7B 15935300 15938408 3108 False 752.000000 1869 92.024400 873 4868 5 chr7B.!!$F4 3995
9 TraesCS7A01G120700 chr7B 10208331 10208866 535 False 274.000000 274 76.259000 836 1387 1 chr7B.!!$F2 551
10 TraesCS7A01G120700 chr2B 55208343 55210340 1997 True 386.500000 549 83.034500 854 3021 2 chr2B.!!$R4 2167

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
180 181 0.027194 CTCGACATTCTGCCGCAATG 59.973 55.0 3.88 3.88 37.29 2.82 F
269 270 0.035739 TCCGACAAACTAACAGGCCC 59.964 55.0 0.00 0.00 0.00 5.80 F
686 2445 0.039437 ACGTACACTTGAGAGCACGG 60.039 55.0 6.25 0.00 33.03 4.94 F
729 2488 0.308684 AGCAACACGCATGTCAACAG 59.691 50.0 0.00 0.00 46.13 3.16 F
3155 12953 0.894141 TCCGTTTGATTTGGCCCATG 59.106 50.0 0.00 0.00 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2905 12699 7.712639 TGCATGGAACTAAACTTTTTATGCAAA 59.287 29.630 0.00 0.0 43.47 3.68 R
2940 12737 9.377383 ACGATATAAACAAGAAAAACTGAAACG 57.623 29.630 0.00 0.0 0.00 3.60 R
3239 13037 0.654683 GTGCATGGCAGATTCGAGAC 59.345 55.000 0.00 0.0 40.08 3.36 R
3372 13170 9.490379 ACATCCAACTACTTTACTTTTCTACAG 57.510 33.333 0.00 0.0 0.00 2.74 R
4524 14421 0.396811 ACACTTAGTTTCCTGCGCCT 59.603 50.000 4.18 0.0 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.398318 AAAAACTGGTCCAAGAACCCT 57.602 42.857 0.00 0.00 38.65 4.34
32 33 2.658807 AAACTGGTCCAAGAACCCTC 57.341 50.000 0.00 0.00 38.65 4.30
33 34 1.821088 AACTGGTCCAAGAACCCTCT 58.179 50.000 0.00 0.00 38.65 3.69
34 35 1.059913 ACTGGTCCAAGAACCCTCTG 58.940 55.000 0.00 0.00 38.65 3.35
35 36 0.326264 CTGGTCCAAGAACCCTCTGG 59.674 60.000 0.00 0.00 38.65 3.86
36 37 0.104672 TGGTCCAAGAACCCTCTGGA 60.105 55.000 0.00 0.00 38.65 3.86
37 38 1.064825 GGTCCAAGAACCCTCTGGAA 58.935 55.000 0.00 0.00 33.42 3.53
38 39 1.003696 GGTCCAAGAACCCTCTGGAAG 59.996 57.143 0.00 0.00 33.42 3.46
39 40 1.003696 GTCCAAGAACCCTCTGGAAGG 59.996 57.143 0.00 0.00 45.77 3.46
40 41 1.068121 CCAAGAACCCTCTGGAAGGT 58.932 55.000 0.00 0.00 44.56 3.50
44 45 2.476081 AACCCTCTGGAAGGTTCCC 58.524 57.895 6.29 0.00 42.85 3.97
45 46 0.402861 AACCCTCTGGAAGGTTCCCA 60.403 55.000 6.29 0.00 42.85 4.37
46 47 1.984815 AACCCTCTGGAAGGTTCCCAA 60.985 52.381 6.29 0.00 42.85 4.12
47 48 3.512691 AACCCTCTGGAAGGTTCCCAAA 61.513 50.000 6.29 0.00 42.85 3.28
48 49 4.993693 AACCCTCTGGAAGGTTCCCAAAA 61.994 47.826 6.29 0.00 42.85 2.44
52 53 2.347630 GGAAGGTTCCCAAAACCGG 58.652 57.895 0.00 0.00 44.82 5.28
53 54 0.468585 GGAAGGTTCCCAAAACCGGT 60.469 55.000 0.00 0.00 44.82 5.28
54 55 0.956633 GAAGGTTCCCAAAACCGGTC 59.043 55.000 8.04 0.00 44.82 4.79
55 56 0.259356 AAGGTTCCCAAAACCGGTCA 59.741 50.000 8.04 0.00 44.82 4.02
56 57 0.179001 AGGTTCCCAAAACCGGTCAG 60.179 55.000 8.04 0.00 44.82 3.51
57 58 3.551436 AGGTTCCCAAAACCGGTCAGG 62.551 57.143 8.04 10.47 44.82 3.86
58 59 0.179012 GTTCCCAAAACCGGTCAGGA 60.179 55.000 8.04 9.30 45.00 3.86
59 60 0.551879 TTCCCAAAACCGGTCAGGAA 59.448 50.000 8.04 15.15 45.00 3.36
60 61 0.179012 TCCCAAAACCGGTCAGGAAC 60.179 55.000 8.04 0.00 45.00 3.62
61 62 1.176619 CCCAAAACCGGTCAGGAACC 61.177 60.000 8.04 0.00 45.00 3.62
62 63 0.179001 CCAAAACCGGTCAGGAACCT 60.179 55.000 8.04 0.00 46.87 3.50
63 64 1.687563 CAAAACCGGTCAGGAACCTT 58.312 50.000 8.04 0.00 46.87 3.50
64 65 1.607148 CAAAACCGGTCAGGAACCTTC 59.393 52.381 8.04 0.00 46.87 3.46
65 66 0.109913 AAACCGGTCAGGAACCTTCC 59.890 55.000 8.04 0.00 46.87 3.46
76 77 2.515854 GGAACCTTCCAGAAAGTTCCC 58.484 52.381 22.40 10.33 46.76 3.97
77 78 2.158519 GGAACCTTCCAGAAAGTTCCCA 60.159 50.000 22.40 0.00 46.76 4.37
78 79 3.562182 GAACCTTCCAGAAAGTTCCCAA 58.438 45.455 9.72 0.00 32.69 4.12
79 80 3.680777 ACCTTCCAGAAAGTTCCCAAA 57.319 42.857 0.00 0.00 32.69 3.28
80 81 3.989056 ACCTTCCAGAAAGTTCCCAAAA 58.011 40.909 0.00 0.00 32.69 2.44
81 82 3.704566 ACCTTCCAGAAAGTTCCCAAAAC 59.295 43.478 0.00 0.00 32.69 2.43
82 83 3.069586 CCTTCCAGAAAGTTCCCAAAACC 59.930 47.826 0.00 0.00 32.69 3.27
83 84 2.303175 TCCAGAAAGTTCCCAAAACCG 58.697 47.619 0.00 0.00 0.00 4.44
84 85 1.339929 CCAGAAAGTTCCCAAAACCGG 59.660 52.381 0.00 0.00 0.00 5.28
85 86 2.303175 CAGAAAGTTCCCAAAACCGGA 58.697 47.619 9.46 0.00 0.00 5.14
86 87 2.890945 CAGAAAGTTCCCAAAACCGGAT 59.109 45.455 9.46 0.00 0.00 4.18
87 88 4.076394 CAGAAAGTTCCCAAAACCGGATA 58.924 43.478 9.46 0.00 0.00 2.59
88 89 4.521256 CAGAAAGTTCCCAAAACCGGATAA 59.479 41.667 9.46 0.00 0.00 1.75
89 90 5.185056 CAGAAAGTTCCCAAAACCGGATAAT 59.815 40.000 9.46 0.00 0.00 1.28
90 91 5.185056 AGAAAGTTCCCAAAACCGGATAATG 59.815 40.000 9.46 0.00 0.00 1.90
91 92 4.042271 AGTTCCCAAAACCGGATAATGT 57.958 40.909 9.46 0.00 0.00 2.71
92 93 5.182169 AGTTCCCAAAACCGGATAATGTA 57.818 39.130 9.46 0.00 0.00 2.29
93 94 5.190677 AGTTCCCAAAACCGGATAATGTAG 58.809 41.667 9.46 0.00 0.00 2.74
94 95 3.547746 TCCCAAAACCGGATAATGTAGC 58.452 45.455 9.46 0.00 0.00 3.58
95 96 2.289547 CCCAAAACCGGATAATGTAGCG 59.710 50.000 9.46 0.00 0.00 4.26
96 97 2.286772 CCAAAACCGGATAATGTAGCGC 60.287 50.000 9.46 0.00 0.00 5.92
97 98 1.214367 AAACCGGATAATGTAGCGCG 58.786 50.000 9.46 0.00 0.00 6.86
98 99 0.103572 AACCGGATAATGTAGCGCGT 59.896 50.000 9.46 0.00 0.00 6.01
99 100 0.596600 ACCGGATAATGTAGCGCGTG 60.597 55.000 9.46 0.00 0.00 5.34
100 101 0.596600 CCGGATAATGTAGCGCGTGT 60.597 55.000 8.43 0.00 0.00 4.49
101 102 1.335233 CCGGATAATGTAGCGCGTGTA 60.335 52.381 8.43 0.00 0.00 2.90
102 103 1.712350 CGGATAATGTAGCGCGTGTAC 59.288 52.381 8.43 10.85 0.00 2.90
103 104 2.603892 CGGATAATGTAGCGCGTGTACT 60.604 50.000 8.43 0.00 0.00 2.73
104 105 3.364267 CGGATAATGTAGCGCGTGTACTA 60.364 47.826 8.43 0.00 0.00 1.82
105 106 4.670992 CGGATAATGTAGCGCGTGTACTAT 60.671 45.833 8.43 5.28 0.00 2.12
106 107 4.792189 GGATAATGTAGCGCGTGTACTATC 59.208 45.833 8.43 12.90 0.00 2.08
107 108 3.984508 AATGTAGCGCGTGTACTATCT 57.015 42.857 8.43 0.00 0.00 1.98
108 109 3.984508 ATGTAGCGCGTGTACTATCTT 57.015 42.857 8.43 0.00 0.00 2.40
109 110 3.060978 TGTAGCGCGTGTACTATCTTG 57.939 47.619 8.43 0.00 0.00 3.02
110 111 2.421073 TGTAGCGCGTGTACTATCTTGT 59.579 45.455 8.43 0.00 0.00 3.16
111 112 3.622612 TGTAGCGCGTGTACTATCTTGTA 59.377 43.478 8.43 0.00 0.00 2.41
112 113 3.335786 AGCGCGTGTACTATCTTGTAG 57.664 47.619 8.43 0.00 0.00 2.74
113 114 2.681848 AGCGCGTGTACTATCTTGTAGT 59.318 45.455 8.43 0.00 0.00 2.73
114 115 3.128242 AGCGCGTGTACTATCTTGTAGTT 59.872 43.478 8.43 0.00 0.00 2.24
115 116 3.239941 GCGCGTGTACTATCTTGTAGTTG 59.760 47.826 8.43 0.00 0.00 3.16
116 117 3.789756 CGCGTGTACTATCTTGTAGTTGG 59.210 47.826 0.00 0.00 0.00 3.77
117 118 4.110482 GCGTGTACTATCTTGTAGTTGGG 58.890 47.826 0.00 0.00 0.00 4.12
118 119 4.110482 CGTGTACTATCTTGTAGTTGGGC 58.890 47.826 0.00 0.00 0.00 5.36
119 120 4.439968 GTGTACTATCTTGTAGTTGGGCC 58.560 47.826 0.00 0.00 0.00 5.80
120 121 2.981859 ACTATCTTGTAGTTGGGCCG 57.018 50.000 0.00 0.00 0.00 6.13
121 122 1.485066 ACTATCTTGTAGTTGGGCCGG 59.515 52.381 0.00 0.00 0.00 6.13
122 123 0.179468 TATCTTGTAGTTGGGCCGGC 59.821 55.000 21.18 21.18 0.00 6.13
123 124 2.552231 ATCTTGTAGTTGGGCCGGCC 62.552 60.000 38.57 38.57 0.00 6.13
136 137 4.592192 CGGCCCATCGTGATCGCT 62.592 66.667 4.48 0.00 36.96 4.93
137 138 2.734591 GGCCCATCGTGATCGCTA 59.265 61.111 4.48 0.00 36.96 4.26
138 139 1.373497 GGCCCATCGTGATCGCTAG 60.373 63.158 4.48 0.00 36.96 3.42
139 140 1.373497 GCCCATCGTGATCGCTAGG 60.373 63.158 4.48 3.36 36.96 3.02
140 141 2.041976 CCCATCGTGATCGCTAGGT 58.958 57.895 4.48 0.00 36.96 3.08
141 142 0.039074 CCCATCGTGATCGCTAGGTC 60.039 60.000 4.48 0.00 36.96 3.85
142 143 0.386100 CCATCGTGATCGCTAGGTCG 60.386 60.000 4.48 0.00 36.96 4.79
143 144 0.999228 CATCGTGATCGCTAGGTCGC 60.999 60.000 4.48 0.00 36.96 5.19
144 145 1.167155 ATCGTGATCGCTAGGTCGCT 61.167 55.000 4.48 0.00 36.96 4.93
145 146 1.369448 CGTGATCGCTAGGTCGCTC 60.369 63.158 4.48 0.00 0.00 5.03
146 147 1.369448 GTGATCGCTAGGTCGCTCG 60.369 63.158 0.00 0.00 0.00 5.03
147 148 2.427740 GATCGCTAGGTCGCTCGC 60.428 66.667 0.00 0.00 0.00 5.03
148 149 4.315122 ATCGCTAGGTCGCTCGCG 62.315 66.667 0.00 0.00 46.28 5.87
151 152 3.878519 GCTAGGTCGCTCGCGTCT 61.879 66.667 5.77 11.97 40.74 4.18
152 153 2.023461 CTAGGTCGCTCGCGTCTG 59.977 66.667 5.77 0.00 40.74 3.51
153 154 2.745100 TAGGTCGCTCGCGTCTGT 60.745 61.111 5.77 0.97 40.74 3.41
154 155 2.904747 CTAGGTCGCTCGCGTCTGTG 62.905 65.000 5.77 4.86 40.74 3.66
163 164 3.073446 GCGTCTGTGCGTTAGCTC 58.927 61.111 0.00 0.00 45.42 4.09
164 165 2.778997 GCGTCTGTGCGTTAGCTCG 61.779 63.158 0.00 0.00 45.42 5.03
165 166 1.154282 CGTCTGTGCGTTAGCTCGA 60.154 57.895 0.00 0.00 45.42 4.04
166 167 1.396543 CGTCTGTGCGTTAGCTCGAC 61.397 60.000 0.00 0.00 45.42 4.20
167 168 0.386858 GTCTGTGCGTTAGCTCGACA 60.387 55.000 0.00 0.00 45.42 4.35
168 169 0.526211 TCTGTGCGTTAGCTCGACAT 59.474 50.000 0.00 0.00 45.42 3.06
169 170 1.067846 TCTGTGCGTTAGCTCGACATT 60.068 47.619 0.00 0.00 45.42 2.71
170 171 1.321743 CTGTGCGTTAGCTCGACATTC 59.678 52.381 0.00 0.00 45.42 2.67
171 172 1.067846 TGTGCGTTAGCTCGACATTCT 60.068 47.619 0.00 0.00 45.42 2.40
172 173 1.321743 GTGCGTTAGCTCGACATTCTG 59.678 52.381 0.00 0.00 45.42 3.02
173 174 0.299003 GCGTTAGCTCGACATTCTGC 59.701 55.000 0.00 0.00 41.01 4.26
174 175 0.924090 CGTTAGCTCGACATTCTGCC 59.076 55.000 0.00 0.00 0.00 4.85
175 176 0.924090 GTTAGCTCGACATTCTGCCG 59.076 55.000 0.00 0.00 0.00 5.69
176 177 0.806102 TTAGCTCGACATTCTGCCGC 60.806 55.000 0.00 0.00 0.00 6.53
177 178 1.944234 TAGCTCGACATTCTGCCGCA 61.944 55.000 0.00 0.00 0.00 5.69
178 179 2.390599 GCTCGACATTCTGCCGCAA 61.391 57.895 0.00 0.00 0.00 4.85
179 180 1.709147 GCTCGACATTCTGCCGCAAT 61.709 55.000 0.00 0.00 0.00 3.56
180 181 0.027194 CTCGACATTCTGCCGCAATG 59.973 55.000 3.88 3.88 37.29 2.82
181 182 0.390998 TCGACATTCTGCCGCAATGA 60.391 50.000 11.24 0.00 35.54 2.57
182 183 0.027194 CGACATTCTGCCGCAATGAG 59.973 55.000 11.24 2.64 35.54 2.90
183 184 0.379669 GACATTCTGCCGCAATGAGG 59.620 55.000 11.24 0.00 35.54 3.86
184 185 1.033746 ACATTCTGCCGCAATGAGGG 61.034 55.000 11.24 0.00 35.54 4.30
185 186 1.033746 CATTCTGCCGCAATGAGGGT 61.034 55.000 4.95 0.00 33.69 4.34
186 187 0.749454 ATTCTGCCGCAATGAGGGTC 60.749 55.000 4.95 0.00 0.00 4.46
187 188 2.819984 TTCTGCCGCAATGAGGGTCC 62.820 60.000 4.95 0.00 0.00 4.46
188 189 4.776322 TGCCGCAATGAGGGTCCG 62.776 66.667 4.95 0.00 0.00 4.79
189 190 4.778143 GCCGCAATGAGGGTCCGT 62.778 66.667 4.95 0.00 0.00 4.69
190 191 2.046314 CCGCAATGAGGGTCCGTT 60.046 61.111 0.00 0.00 0.00 4.44
191 192 1.219664 CCGCAATGAGGGTCCGTTA 59.780 57.895 0.00 0.00 0.00 3.18
192 193 0.810031 CCGCAATGAGGGTCCGTTAG 60.810 60.000 0.00 0.00 0.00 2.34
193 194 0.810031 CGCAATGAGGGTCCGTTAGG 60.810 60.000 0.00 0.00 39.46 2.69
194 195 0.539986 GCAATGAGGGTCCGTTAGGA 59.460 55.000 0.00 0.00 46.11 2.94
205 206 3.513909 TCCGTTAGGATATTCCGAGGA 57.486 47.619 0.00 0.00 42.75 3.71
206 207 3.836146 TCCGTTAGGATATTCCGAGGAA 58.164 45.455 7.06 7.06 42.75 3.36
207 208 4.217510 TCCGTTAGGATATTCCGAGGAAA 58.782 43.478 8.79 0.00 42.75 3.13
208 209 4.650588 TCCGTTAGGATATTCCGAGGAAAA 59.349 41.667 8.79 0.00 42.75 2.29
209 210 4.989168 CCGTTAGGATATTCCGAGGAAAAG 59.011 45.833 8.79 0.00 42.75 2.27
210 211 5.452917 CCGTTAGGATATTCCGAGGAAAAGT 60.453 44.000 8.79 0.00 42.75 2.66
211 212 6.239120 CCGTTAGGATATTCCGAGGAAAAGTA 60.239 42.308 8.79 0.00 42.75 2.24
212 213 6.640092 CGTTAGGATATTCCGAGGAAAAGTAC 59.360 42.308 8.79 0.00 42.75 2.73
213 214 5.548181 AGGATATTCCGAGGAAAAGTACC 57.452 43.478 8.79 8.30 42.75 3.34
214 215 4.347292 AGGATATTCCGAGGAAAAGTACCC 59.653 45.833 8.79 0.00 42.75 3.69
215 216 4.347292 GGATATTCCGAGGAAAAGTACCCT 59.653 45.833 8.79 0.00 37.69 4.34
216 217 5.541484 GGATATTCCGAGGAAAAGTACCCTA 59.459 44.000 8.79 0.00 37.69 3.53
217 218 6.042437 GGATATTCCGAGGAAAAGTACCCTAA 59.958 42.308 8.79 0.00 37.69 2.69
218 219 5.767277 ATTCCGAGGAAAAGTACCCTAAA 57.233 39.130 8.79 0.00 37.69 1.85
219 220 5.565455 TTCCGAGGAAAAGTACCCTAAAA 57.435 39.130 1.44 0.00 31.84 1.52
220 221 5.565455 TCCGAGGAAAAGTACCCTAAAAA 57.435 39.130 0.00 0.00 31.84 1.94
239 240 1.839424 AAAATCAGGCGGAGGAAAGG 58.161 50.000 0.00 0.00 0.00 3.11
240 241 0.991920 AAATCAGGCGGAGGAAAGGA 59.008 50.000 0.00 0.00 0.00 3.36
241 242 0.991920 AATCAGGCGGAGGAAAGGAA 59.008 50.000 0.00 0.00 0.00 3.36
242 243 0.543749 ATCAGGCGGAGGAAAGGAAG 59.456 55.000 0.00 0.00 0.00 3.46
243 244 0.836400 TCAGGCGGAGGAAAGGAAGT 60.836 55.000 0.00 0.00 0.00 3.01
244 245 0.391793 CAGGCGGAGGAAAGGAAGTC 60.392 60.000 0.00 0.00 0.00 3.01
245 246 0.545548 AGGCGGAGGAAAGGAAGTCT 60.546 55.000 0.00 0.00 0.00 3.24
246 247 0.325272 GGCGGAGGAAAGGAAGTCTT 59.675 55.000 0.00 0.00 37.28 3.01
247 248 1.676314 GGCGGAGGAAAGGAAGTCTTC 60.676 57.143 3.80 3.80 33.94 2.87
248 249 1.276705 GCGGAGGAAAGGAAGTCTTCT 59.723 52.381 12.31 0.00 33.94 2.85
249 250 2.675603 GCGGAGGAAAGGAAGTCTTCTC 60.676 54.545 12.31 2.53 33.94 2.87
250 251 2.829120 CGGAGGAAAGGAAGTCTTCTCT 59.171 50.000 12.31 5.33 33.94 3.10
251 252 3.119280 CGGAGGAAAGGAAGTCTTCTCTC 60.119 52.174 12.31 10.64 35.54 3.20
252 253 3.196901 GGAGGAAAGGAAGTCTTCTCTCC 59.803 52.174 12.31 13.97 42.08 3.71
253 254 2.829120 AGGAAAGGAAGTCTTCTCTCCG 59.171 50.000 12.31 0.00 33.94 4.63
254 255 2.826725 GGAAAGGAAGTCTTCTCTCCGA 59.173 50.000 12.31 0.00 33.94 4.55
255 256 3.367600 GGAAAGGAAGTCTTCTCTCCGAC 60.368 52.174 12.31 0.00 33.94 4.79
256 257 2.588464 AGGAAGTCTTCTCTCCGACA 57.412 50.000 12.31 0.00 32.68 4.35
257 258 2.877866 AGGAAGTCTTCTCTCCGACAA 58.122 47.619 12.31 0.00 32.68 3.18
258 259 3.231818 AGGAAGTCTTCTCTCCGACAAA 58.768 45.455 12.31 0.00 32.68 2.83
259 260 3.006003 AGGAAGTCTTCTCTCCGACAAAC 59.994 47.826 12.31 0.00 32.68 2.93
260 261 3.006003 GGAAGTCTTCTCTCCGACAAACT 59.994 47.826 12.31 0.00 32.68 2.66
261 262 4.217983 GGAAGTCTTCTCTCCGACAAACTA 59.782 45.833 12.31 0.00 32.68 2.24
262 263 5.278858 GGAAGTCTTCTCTCCGACAAACTAA 60.279 44.000 12.31 0.00 32.68 2.24
263 264 5.123805 AGTCTTCTCTCCGACAAACTAAC 57.876 43.478 0.00 0.00 32.68 2.34
264 265 4.583489 AGTCTTCTCTCCGACAAACTAACA 59.417 41.667 0.00 0.00 32.68 2.41
265 266 4.918583 GTCTTCTCTCCGACAAACTAACAG 59.081 45.833 0.00 0.00 0.00 3.16
266 267 3.936372 TCTCTCCGACAAACTAACAGG 57.064 47.619 0.00 0.00 0.00 4.00
267 268 2.029290 TCTCTCCGACAAACTAACAGGC 60.029 50.000 0.00 0.00 0.00 4.85
268 269 1.001633 TCTCCGACAAACTAACAGGCC 59.998 52.381 0.00 0.00 0.00 5.19
269 270 0.035739 TCCGACAAACTAACAGGCCC 59.964 55.000 0.00 0.00 0.00 5.80
270 271 0.250553 CCGACAAACTAACAGGCCCA 60.251 55.000 0.00 0.00 0.00 5.36
271 272 1.600023 CGACAAACTAACAGGCCCAA 58.400 50.000 0.00 0.00 0.00 4.12
272 273 1.265905 CGACAAACTAACAGGCCCAAC 59.734 52.381 0.00 0.00 0.00 3.77
273 274 2.303175 GACAAACTAACAGGCCCAACA 58.697 47.619 0.00 0.00 0.00 3.33
274 275 2.028876 ACAAACTAACAGGCCCAACAC 58.971 47.619 0.00 0.00 0.00 3.32
275 276 2.028130 CAAACTAACAGGCCCAACACA 58.972 47.619 0.00 0.00 0.00 3.72
276 277 1.687563 AACTAACAGGCCCAACACAC 58.312 50.000 0.00 0.00 0.00 3.82
277 278 0.548989 ACTAACAGGCCCAACACACA 59.451 50.000 0.00 0.00 0.00 3.72
278 279 0.951558 CTAACAGGCCCAACACACAC 59.048 55.000 0.00 0.00 0.00 3.82
279 280 0.256177 TAACAGGCCCAACACACACA 59.744 50.000 0.00 0.00 0.00 3.72
280 281 0.613292 AACAGGCCCAACACACACAA 60.613 50.000 0.00 0.00 0.00 3.33
281 282 0.613292 ACAGGCCCAACACACACAAA 60.613 50.000 0.00 0.00 0.00 2.83
282 283 0.534412 CAGGCCCAACACACACAAAA 59.466 50.000 0.00 0.00 0.00 2.44
283 284 1.066573 CAGGCCCAACACACACAAAAA 60.067 47.619 0.00 0.00 0.00 1.94
284 285 1.066502 AGGCCCAACACACACAAAAAC 60.067 47.619 0.00 0.00 0.00 2.43
285 286 1.338200 GGCCCAACACACACAAAAACA 60.338 47.619 0.00 0.00 0.00 2.83
286 287 2.417719 GCCCAACACACACAAAAACAA 58.582 42.857 0.00 0.00 0.00 2.83
287 288 2.808543 GCCCAACACACACAAAAACAAA 59.191 40.909 0.00 0.00 0.00 2.83
288 289 3.364465 GCCCAACACACACAAAAACAAAC 60.364 43.478 0.00 0.00 0.00 2.93
289 290 3.809832 CCCAACACACACAAAAACAAACA 59.190 39.130 0.00 0.00 0.00 2.83
290 291 4.273480 CCCAACACACACAAAAACAAACAA 59.727 37.500 0.00 0.00 0.00 2.83
291 292 5.220854 CCCAACACACACAAAAACAAACAAA 60.221 36.000 0.00 0.00 0.00 2.83
292 293 5.678919 CCAACACACACAAAAACAAACAAAC 59.321 36.000 0.00 0.00 0.00 2.93
293 294 6.250819 CAACACACACAAAAACAAACAAACA 58.749 32.000 0.00 0.00 0.00 2.83
294 295 6.422776 ACACACACAAAAACAAACAAACAA 57.577 29.167 0.00 0.00 0.00 2.83
295 296 6.481984 ACACACACAAAAACAAACAAACAAG 58.518 32.000 0.00 0.00 0.00 3.16
296 297 6.092807 ACACACACAAAAACAAACAAACAAGT 59.907 30.769 0.00 0.00 0.00 3.16
297 298 7.277981 ACACACACAAAAACAAACAAACAAGTA 59.722 29.630 0.00 0.00 0.00 2.24
298 299 8.116753 CACACACAAAAACAAACAAACAAGTAA 58.883 29.630 0.00 0.00 0.00 2.24
299 300 8.665685 ACACACAAAAACAAACAAACAAGTAAA 58.334 25.926 0.00 0.00 0.00 2.01
300 301 9.490663 CACACAAAAACAAACAAACAAGTAAAA 57.509 25.926 0.00 0.00 0.00 1.52
301 302 9.709600 ACACAAAAACAAACAAACAAGTAAAAG 57.290 25.926 0.00 0.00 0.00 2.27
302 303 9.922305 CACAAAAACAAACAAACAAGTAAAAGA 57.078 25.926 0.00 0.00 0.00 2.52
306 307 8.528917 AAACAAACAAACAAGTAAAAGAGACC 57.471 30.769 0.00 0.00 0.00 3.85
307 308 7.222000 ACAAACAAACAAGTAAAAGAGACCA 57.778 32.000 0.00 0.00 0.00 4.02
308 309 7.088272 ACAAACAAACAAGTAAAAGAGACCAC 58.912 34.615 0.00 0.00 0.00 4.16
309 310 6.827586 AACAAACAAGTAAAAGAGACCACA 57.172 33.333 0.00 0.00 0.00 4.17
310 311 6.827586 ACAAACAAGTAAAAGAGACCACAA 57.172 33.333 0.00 0.00 0.00 3.33
311 312 7.222000 ACAAACAAGTAAAAGAGACCACAAA 57.778 32.000 0.00 0.00 0.00 2.83
312 313 7.662897 ACAAACAAGTAAAAGAGACCACAAAA 58.337 30.769 0.00 0.00 0.00 2.44
313 314 7.812669 ACAAACAAGTAAAAGAGACCACAAAAG 59.187 33.333 0.00 0.00 0.00 2.27
314 315 7.462571 AACAAGTAAAAGAGACCACAAAAGT 57.537 32.000 0.00 0.00 0.00 2.66
315 316 6.852664 ACAAGTAAAAGAGACCACAAAAGTG 58.147 36.000 0.00 0.00 0.00 3.16
316 317 5.500645 AGTAAAAGAGACCACAAAAGTGC 57.499 39.130 0.00 0.00 0.00 4.40
317 318 5.193679 AGTAAAAGAGACCACAAAAGTGCT 58.806 37.500 0.00 0.00 0.00 4.40
318 319 4.376340 AAAAGAGACCACAAAAGTGCTG 57.624 40.909 0.00 0.00 0.00 4.41
319 320 1.972872 AGAGACCACAAAAGTGCTGG 58.027 50.000 0.00 0.00 34.16 4.85
320 321 1.212935 AGAGACCACAAAAGTGCTGGT 59.787 47.619 0.00 0.00 40.01 4.00
321 322 1.334869 GAGACCACAAAAGTGCTGGTG 59.665 52.381 0.00 0.00 38.49 4.17
322 323 1.102978 GACCACAAAAGTGCTGGTGT 58.897 50.000 0.00 0.00 38.49 4.16
323 324 1.065551 GACCACAAAAGTGCTGGTGTC 59.934 52.381 0.00 0.00 38.49 3.67
324 325 1.102154 CCACAAAAGTGCTGGTGTCA 58.898 50.000 0.00 0.00 0.00 3.58
325 326 1.682854 CCACAAAAGTGCTGGTGTCAT 59.317 47.619 0.00 0.00 0.00 3.06
326 327 2.884012 CCACAAAAGTGCTGGTGTCATA 59.116 45.455 0.00 0.00 0.00 2.15
327 328 3.304659 CCACAAAAGTGCTGGTGTCATAC 60.305 47.826 0.00 0.00 0.00 2.39
328 329 3.565482 CACAAAAGTGCTGGTGTCATACT 59.435 43.478 0.00 0.00 0.00 2.12
329 330 4.036734 CACAAAAGTGCTGGTGTCATACTT 59.963 41.667 0.00 0.00 34.10 2.24
330 331 5.238432 CACAAAAGTGCTGGTGTCATACTTA 59.762 40.000 0.00 0.00 33.10 2.24
331 332 5.470098 ACAAAAGTGCTGGTGTCATACTTAG 59.530 40.000 0.00 0.00 33.10 2.18
332 333 5.483685 AAAGTGCTGGTGTCATACTTAGA 57.516 39.130 0.00 0.00 33.10 2.10
333 334 5.683876 AAGTGCTGGTGTCATACTTAGAT 57.316 39.130 0.00 0.00 32.28 1.98
334 335 5.016051 AGTGCTGGTGTCATACTTAGATG 57.984 43.478 0.00 0.00 0.00 2.90
335 336 4.467795 AGTGCTGGTGTCATACTTAGATGT 59.532 41.667 0.00 0.00 0.00 3.06
336 337 4.568359 GTGCTGGTGTCATACTTAGATGTG 59.432 45.833 0.00 0.00 0.00 3.21
337 338 4.466015 TGCTGGTGTCATACTTAGATGTGA 59.534 41.667 0.00 0.00 0.00 3.58
338 339 5.046529 GCTGGTGTCATACTTAGATGTGAG 58.953 45.833 0.00 0.00 0.00 3.51
339 340 5.163509 GCTGGTGTCATACTTAGATGTGAGA 60.164 44.000 0.00 0.00 0.00 3.27
340 341 6.462207 GCTGGTGTCATACTTAGATGTGAGAT 60.462 42.308 0.00 0.00 0.00 2.75
341 342 7.255625 GCTGGTGTCATACTTAGATGTGAGATA 60.256 40.741 0.00 0.00 0.00 1.98
342 343 8.712228 TGGTGTCATACTTAGATGTGAGATAT 57.288 34.615 0.00 0.00 0.00 1.63
343 344 9.147732 TGGTGTCATACTTAGATGTGAGATATT 57.852 33.333 0.00 0.00 0.00 1.28
362 363 8.835550 AGATATTATCTCACATCTAGATGCCA 57.164 34.615 28.86 16.30 37.40 4.92
363 364 9.436866 AGATATTATCTCACATCTAGATGCCAT 57.563 33.333 28.86 18.09 37.40 4.40
372 373 9.539825 CTCACATCTAGATGCCATATATTAACC 57.460 37.037 28.86 0.00 42.39 2.85
373 374 8.486210 TCACATCTAGATGCCATATATTAACCC 58.514 37.037 28.86 0.00 42.39 4.11
394 395 8.621532 AACCCATACATTAATATGCTACACTG 57.378 34.615 0.00 0.00 35.03 3.66
537 2296 0.170116 TTCCGCGACATGCAATTTCC 59.830 50.000 8.23 0.00 46.97 3.13
554 2313 6.570692 CAATTTCCAGATCTCATTTCAAGGG 58.429 40.000 0.00 0.00 0.00 3.95
584 2343 1.816224 CATTGTGGTCCTTAAACCCCG 59.184 52.381 0.00 0.00 38.65 5.73
585 2344 0.110869 TTGTGGTCCTTAAACCCCGG 59.889 55.000 0.00 0.00 38.65 5.73
586 2345 1.676635 GTGGTCCTTAAACCCCGGC 60.677 63.158 0.00 0.00 38.65 6.13
587 2346 2.154747 TGGTCCTTAAACCCCGGCA 61.155 57.895 0.00 0.00 38.65 5.69
588 2347 1.305287 GGTCCTTAAACCCCGGCAT 59.695 57.895 0.00 0.00 32.82 4.40
589 2348 1.035385 GGTCCTTAAACCCCGGCATG 61.035 60.000 0.00 0.00 32.82 4.06
590 2349 1.035385 GTCCTTAAACCCCGGCATGG 61.035 60.000 0.00 0.00 37.55 3.66
591 2350 2.423064 CCTTAAACCCCGGCATGGC 61.423 63.158 9.69 9.69 35.87 4.40
593 2352 3.269521 TTAAACCCCGGCATGGCGA 62.270 57.895 39.49 18.39 35.87 5.54
594 2353 3.690685 TAAACCCCGGCATGGCGAG 62.691 63.158 39.49 30.65 35.87 5.03
610 2369 2.238245 CGAGAGCATTTGCAAGTGTC 57.762 50.000 21.29 16.63 45.16 3.67
611 2370 1.135859 CGAGAGCATTTGCAAGTGTCC 60.136 52.381 21.29 13.73 45.16 4.02
612 2371 1.200948 GAGAGCATTTGCAAGTGTCCC 59.799 52.381 21.29 11.60 45.16 4.46
613 2372 1.202976 AGAGCATTTGCAAGTGTCCCT 60.203 47.619 21.29 11.25 45.16 4.20
614 2373 2.040278 AGAGCATTTGCAAGTGTCCCTA 59.960 45.455 21.29 0.00 45.16 3.53
615 2374 3.019564 GAGCATTTGCAAGTGTCCCTAT 58.980 45.455 21.29 0.00 45.16 2.57
616 2375 3.019564 AGCATTTGCAAGTGTCCCTATC 58.980 45.455 21.29 4.85 45.16 2.08
617 2376 2.099756 GCATTTGCAAGTGTCCCTATCC 59.900 50.000 21.29 0.66 41.59 2.59
618 2377 2.107950 TTTGCAAGTGTCCCTATCCG 57.892 50.000 0.00 0.00 0.00 4.18
619 2378 0.981183 TTGCAAGTGTCCCTATCCGT 59.019 50.000 0.00 0.00 0.00 4.69
620 2379 0.981183 TGCAAGTGTCCCTATCCGTT 59.019 50.000 0.00 0.00 0.00 4.44
621 2380 1.338674 TGCAAGTGTCCCTATCCGTTG 60.339 52.381 0.00 0.00 0.00 4.10
622 2381 2.012051 GCAAGTGTCCCTATCCGTTGG 61.012 57.143 0.00 0.00 0.00 3.77
623 2382 1.278127 CAAGTGTCCCTATCCGTTGGT 59.722 52.381 0.00 0.00 0.00 3.67
624 2383 1.652947 AGTGTCCCTATCCGTTGGTT 58.347 50.000 0.00 0.00 0.00 3.67
625 2384 1.553704 AGTGTCCCTATCCGTTGGTTC 59.446 52.381 0.00 0.00 0.00 3.62
626 2385 1.276989 GTGTCCCTATCCGTTGGTTCA 59.723 52.381 0.00 0.00 0.00 3.18
627 2386 2.093128 GTGTCCCTATCCGTTGGTTCAT 60.093 50.000 0.00 0.00 0.00 2.57
628 2387 2.574369 TGTCCCTATCCGTTGGTTCATT 59.426 45.455 0.00 0.00 0.00 2.57
629 2388 2.943033 GTCCCTATCCGTTGGTTCATTG 59.057 50.000 0.00 0.00 0.00 2.82
630 2389 1.676006 CCCTATCCGTTGGTTCATTGC 59.324 52.381 0.00 0.00 0.00 3.56
631 2390 2.364632 CCTATCCGTTGGTTCATTGCA 58.635 47.619 0.00 0.00 0.00 4.08
632 2391 2.752354 CCTATCCGTTGGTTCATTGCAA 59.248 45.455 0.00 0.00 0.00 4.08
633 2392 3.192422 CCTATCCGTTGGTTCATTGCAAA 59.808 43.478 1.71 0.00 0.00 3.68
634 2393 3.742433 ATCCGTTGGTTCATTGCAAAA 57.258 38.095 1.71 0.00 0.00 2.44
635 2394 2.815478 TCCGTTGGTTCATTGCAAAAC 58.185 42.857 1.71 4.11 0.00 2.43
636 2395 2.166459 TCCGTTGGTTCATTGCAAAACA 59.834 40.909 14.30 0.00 0.00 2.83
637 2396 2.283884 CCGTTGGTTCATTGCAAAACAC 59.716 45.455 14.30 6.54 0.00 3.32
638 2397 2.283884 CGTTGGTTCATTGCAAAACACC 59.716 45.455 14.30 14.39 0.00 4.16
639 2398 3.265791 GTTGGTTCATTGCAAAACACCA 58.734 40.909 18.35 18.35 33.08 4.17
640 2399 3.176552 TGGTTCATTGCAAAACACCAG 57.823 42.857 18.35 0.00 30.82 4.00
641 2400 1.866601 GGTTCATTGCAAAACACCAGC 59.133 47.619 14.30 0.00 0.00 4.85
642 2401 2.548875 GTTCATTGCAAAACACCAGCA 58.451 42.857 1.71 0.00 36.32 4.41
643 2402 2.222007 TCATTGCAAAACACCAGCAC 57.778 45.000 1.71 0.00 38.11 4.40
644 2403 1.479730 TCATTGCAAAACACCAGCACA 59.520 42.857 1.71 0.00 38.11 4.57
645 2404 2.102757 TCATTGCAAAACACCAGCACAT 59.897 40.909 1.71 0.00 38.11 3.21
646 2405 2.222007 TTGCAAAACACCAGCACATC 57.778 45.000 0.00 0.00 38.11 3.06
647 2406 0.388659 TGCAAAACACCAGCACATCC 59.611 50.000 0.00 0.00 32.55 3.51
648 2407 0.319813 GCAAAACACCAGCACATCCC 60.320 55.000 0.00 0.00 0.00 3.85
649 2408 1.039068 CAAAACACCAGCACATCCCA 58.961 50.000 0.00 0.00 0.00 4.37
650 2409 1.039856 AAAACACCAGCACATCCCAC 58.960 50.000 0.00 0.00 0.00 4.61
651 2410 0.827507 AAACACCAGCACATCCCACC 60.828 55.000 0.00 0.00 0.00 4.61
652 2411 2.005606 AACACCAGCACATCCCACCA 62.006 55.000 0.00 0.00 0.00 4.17
653 2412 1.973281 CACCAGCACATCCCACCAC 60.973 63.158 0.00 0.00 0.00 4.16
654 2413 2.361610 CCAGCACATCCCACCACC 60.362 66.667 0.00 0.00 0.00 4.61
655 2414 2.747460 CAGCACATCCCACCACCG 60.747 66.667 0.00 0.00 0.00 4.94
656 2415 2.927856 AGCACATCCCACCACCGA 60.928 61.111 0.00 0.00 0.00 4.69
657 2416 2.436646 GCACATCCCACCACCGAG 60.437 66.667 0.00 0.00 0.00 4.63
658 2417 2.268920 CACATCCCACCACCGAGG 59.731 66.667 0.00 0.00 45.67 4.63
667 2426 4.293648 CCACCGAGGTGTCACGCA 62.294 66.667 19.62 0.00 44.02 5.24
668 2427 3.036084 CACCGAGGTGTCACGCAC 61.036 66.667 13.82 0.00 46.97 5.34
675 2434 4.314096 GTGTCACGCACGTACACT 57.686 55.556 19.35 0.00 40.25 3.55
676 2435 2.585263 GTGTCACGCACGTACACTT 58.415 52.632 19.35 0.00 40.25 3.16
677 2436 0.228742 GTGTCACGCACGTACACTTG 59.771 55.000 19.35 0.00 40.25 3.16
678 2437 0.100861 TGTCACGCACGTACACTTGA 59.899 50.000 0.00 0.00 0.00 3.02
679 2438 0.776451 GTCACGCACGTACACTTGAG 59.224 55.000 0.00 0.00 0.00 3.02
680 2439 0.664224 TCACGCACGTACACTTGAGA 59.336 50.000 0.00 0.00 0.00 3.27
681 2440 1.053048 CACGCACGTACACTTGAGAG 58.947 55.000 0.00 0.00 0.00 3.20
682 2441 0.663568 ACGCACGTACACTTGAGAGC 60.664 55.000 0.00 0.00 0.00 4.09
683 2442 0.663269 CGCACGTACACTTGAGAGCA 60.663 55.000 0.00 0.00 0.00 4.26
684 2443 0.784778 GCACGTACACTTGAGAGCAC 59.215 55.000 0.00 0.00 0.00 4.40
685 2444 1.053048 CACGTACACTTGAGAGCACG 58.947 55.000 0.00 0.65 34.18 5.34
686 2445 0.039437 ACGTACACTTGAGAGCACGG 60.039 55.000 6.25 0.00 33.03 4.94
687 2446 0.732880 CGTACACTTGAGAGCACGGG 60.733 60.000 0.00 0.00 0.00 5.28
688 2447 0.389948 GTACACTTGAGAGCACGGGG 60.390 60.000 0.00 0.00 0.00 5.73
689 2448 2.167398 TACACTTGAGAGCACGGGGC 62.167 60.000 0.00 0.00 45.30 5.80
715 2474 3.621520 GCAAGCAGCACAAGCAAC 58.378 55.556 0.00 0.00 45.49 4.17
716 2475 1.227031 GCAAGCAGCACAAGCAACA 60.227 52.632 0.00 0.00 45.49 3.33
717 2476 1.485032 GCAAGCAGCACAAGCAACAC 61.485 55.000 0.00 0.00 45.49 3.32
718 2477 1.064621 AAGCAGCACAAGCAACACG 59.935 52.632 0.00 0.00 45.49 4.49
719 2478 2.941964 AAGCAGCACAAGCAACACGC 62.942 55.000 0.00 0.00 45.49 5.34
720 2479 2.408428 CAGCACAAGCAACACGCA 59.592 55.556 0.00 0.00 46.13 5.24
721 2480 1.008194 CAGCACAAGCAACACGCAT 60.008 52.632 0.00 0.00 46.13 4.73
729 2488 0.308684 AGCAACACGCATGTCAACAG 59.691 50.000 0.00 0.00 46.13 3.16
748 2507 1.206849 AGCACTCTCTAGAAGCAAGCC 59.793 52.381 0.00 0.00 32.29 4.35
765 2524 3.361977 CGTGTTGCCGGAAAGGGG 61.362 66.667 5.05 0.00 41.48 4.79
942 3801 4.038080 CGCCAACCGCCAAGAACC 62.038 66.667 0.00 0.00 0.00 3.62
3155 12953 0.894141 TCCGTTTGATTTGGCCCATG 59.106 50.000 0.00 0.00 0.00 3.66
3239 13037 8.950210 AGATTTAGATTGTTCATGTACTGTTGG 58.050 33.333 4.01 0.00 0.00 3.77
3372 13170 3.728076 TGTCTGACACTGTTGTAGTCC 57.272 47.619 6.36 0.00 37.60 3.85
3505 13303 9.160496 ACACTTCTGTCTTTGATTCAGATAATC 57.840 33.333 0.00 0.00 37.91 1.75
3610 13408 9.520515 TCCTTTGCAGAGAAGATACTAATTTTT 57.479 29.630 5.68 0.00 0.00 1.94
3639 13437 9.574516 ACCTGTGAATAAAATTCATATACTCCC 57.425 33.333 5.68 0.00 0.00 4.30
3640 13438 9.799106 CCTGTGAATAAAATTCATATACTCCCT 57.201 33.333 5.68 0.00 0.00 4.20
3642 13440 9.793259 TGTGAATAAAATTCATATACTCCCTCC 57.207 33.333 5.68 0.00 0.00 4.30
3643 13441 8.936864 GTGAATAAAATTCATATACTCCCTCCG 58.063 37.037 5.68 0.00 0.00 4.63
3644 13442 8.656806 TGAATAAAATTCATATACTCCCTCCGT 58.343 33.333 0.00 0.00 0.00 4.69
3648 13446 8.904099 AAAATTCATATACTCCCTCCGTAAAG 57.096 34.615 0.00 0.00 0.00 1.85
3649 13447 7.850935 AATTCATATACTCCCTCCGTAAAGA 57.149 36.000 0.00 0.00 0.00 2.52
3650 13448 7.850935 ATTCATATACTCCCTCCGTAAAGAA 57.149 36.000 0.00 0.00 0.00 2.52
3651 13449 7.664552 TTCATATACTCCCTCCGTAAAGAAA 57.335 36.000 0.00 0.00 0.00 2.52
3652 13450 7.850935 TCATATACTCCCTCCGTAAAGAAAT 57.149 36.000 0.00 0.00 0.00 2.17
3653 13451 8.945195 TCATATACTCCCTCCGTAAAGAAATA 57.055 34.615 0.00 0.00 0.00 1.40
3654 13452 9.543231 TCATATACTCCCTCCGTAAAGAAATAT 57.457 33.333 0.00 0.00 0.00 1.28
3658 13456 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
3659 13457 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
3660 13458 7.783596 ACTCCCTCCGTAAAGAAATATAAGAGA 59.216 37.037 0.00 0.00 0.00 3.10
3661 13459 8.179509 TCCCTCCGTAAAGAAATATAAGAGAG 57.820 38.462 0.00 0.00 0.00 3.20
3662 13460 7.783596 TCCCTCCGTAAAGAAATATAAGAGAGT 59.216 37.037 0.00 0.00 0.00 3.24
3663 13461 8.422566 CCCTCCGTAAAGAAATATAAGAGAGTT 58.577 37.037 0.00 0.00 0.00 3.01
3664 13462 9.819267 CCTCCGTAAAGAAATATAAGAGAGTTT 57.181 33.333 0.00 0.00 0.00 2.66
3692 13490 9.733219 GATTACTAAAGTAGTGATCTAAACGCT 57.267 33.333 11.11 0.00 44.10 5.07
3693 13491 9.733219 ATTACTAAAGTAGTGATCTAAACGCTC 57.267 33.333 0.00 0.00 39.81 5.03
3694 13492 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
3695 13493 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
3696 13494 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
3697 13495 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
3704 13502 9.601217 AGTGATCTAAACGCTCTTATATTTGTT 57.399 29.630 0.00 0.00 0.00 2.83
3768 13566 8.871686 ATATTGTTTCAGGTTTTGTCTTGTTC 57.128 30.769 0.00 0.00 0.00 3.18
3771 13569 6.696411 TGTTTCAGGTTTTGTCTTGTTCATT 58.304 32.000 0.00 0.00 0.00 2.57
3967 13778 3.897505 GGATGCCCACTTTTTGCCTATAT 59.102 43.478 0.00 0.00 0.00 0.86
4194 14008 1.273327 GTTGGGGTTCTTGCAATGAGG 59.727 52.381 0.00 0.00 0.00 3.86
4293 14175 3.644265 TGGTAGTTCTGCTGTTAGTTGGA 59.356 43.478 0.00 0.00 0.00 3.53
4418 14300 6.452242 AGGTTTCGTGGAAAATAAACATTCC 58.548 36.000 0.00 0.00 33.14 3.01
4484 14366 3.639094 CTCTCTTCCCATTACCGAGACAT 59.361 47.826 0.00 0.00 0.00 3.06
4770 14669 4.641645 TGCGGTTGGTGCAGGGAG 62.642 66.667 0.00 0.00 37.44 4.30
4808 14707 0.250295 TGCCCTCAGTTGTGCTGTAC 60.250 55.000 0.00 0.00 45.23 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.052869 AGAGGGTTCTTGGACCAGTTTTT 60.053 43.478 0.00 0.00 41.65 1.94
12 13 2.514160 AGAGGGTTCTTGGACCAGTTTT 59.486 45.455 0.00 0.00 41.65 2.43
13 14 2.136026 AGAGGGTTCTTGGACCAGTTT 58.864 47.619 0.00 0.00 41.65 2.66
14 15 1.421646 CAGAGGGTTCTTGGACCAGTT 59.578 52.381 0.00 0.00 41.65 3.16
15 16 1.059913 CAGAGGGTTCTTGGACCAGT 58.940 55.000 0.00 0.00 41.65 4.00
16 17 0.326264 CCAGAGGGTTCTTGGACCAG 59.674 60.000 0.00 0.00 41.65 4.00
17 18 0.104672 TCCAGAGGGTTCTTGGACCA 60.105 55.000 0.00 0.00 41.65 4.02
18 19 1.003696 CTTCCAGAGGGTTCTTGGACC 59.996 57.143 0.00 0.00 39.04 4.46
19 20 1.003696 CCTTCCAGAGGGTTCTTGGAC 59.996 57.143 0.00 0.00 42.26 4.02
20 21 1.362224 CCTTCCAGAGGGTTCTTGGA 58.638 55.000 0.00 0.00 42.26 3.53
21 22 1.425448 AACCTTCCAGAGGGTTCTTGG 59.575 52.381 8.30 0.00 45.88 3.61
22 23 2.959465 AACCTTCCAGAGGGTTCTTG 57.041 50.000 8.30 0.00 45.88 3.02
26 27 2.476081 GGGAACCTTCCAGAGGGTT 58.524 57.895 13.50 13.50 45.88 4.11
39 40 0.179012 TCCTGACCGGTTTTGGGAAC 60.179 55.000 9.42 0.00 0.00 3.62
40 41 0.551879 TTCCTGACCGGTTTTGGGAA 59.448 50.000 9.42 16.76 0.00 3.97
41 42 0.179012 GTTCCTGACCGGTTTTGGGA 60.179 55.000 9.42 11.50 0.00 4.37
42 43 1.176619 GGTTCCTGACCGGTTTTGGG 61.177 60.000 9.42 9.14 39.00 4.12
43 44 2.337361 GGTTCCTGACCGGTTTTGG 58.663 57.895 9.42 11.91 39.00 3.28
58 59 3.680777 TTGGGAACTTTCTGGAAGGTT 57.319 42.857 9.93 9.93 42.23 3.50
59 60 3.680777 TTTGGGAACTTTCTGGAAGGT 57.319 42.857 0.00 0.00 38.23 3.50
60 61 3.069586 GGTTTTGGGAACTTTCTGGAAGG 59.930 47.826 0.00 0.00 39.79 3.46
61 62 3.243401 CGGTTTTGGGAACTTTCTGGAAG 60.243 47.826 0.00 0.00 41.32 3.46
62 63 2.691011 CGGTTTTGGGAACTTTCTGGAA 59.309 45.455 0.00 0.00 0.00 3.53
63 64 2.303175 CGGTTTTGGGAACTTTCTGGA 58.697 47.619 0.00 0.00 0.00 3.86
64 65 1.339929 CCGGTTTTGGGAACTTTCTGG 59.660 52.381 0.00 0.00 0.00 3.86
65 66 2.303175 TCCGGTTTTGGGAACTTTCTG 58.697 47.619 0.00 0.00 0.00 3.02
66 67 2.740506 TCCGGTTTTGGGAACTTTCT 57.259 45.000 0.00 0.00 0.00 2.52
67 68 5.047590 ACATTATCCGGTTTTGGGAACTTTC 60.048 40.000 0.00 0.00 37.07 2.62
68 69 4.836175 ACATTATCCGGTTTTGGGAACTTT 59.164 37.500 0.00 0.00 37.07 2.66
69 70 4.412843 ACATTATCCGGTTTTGGGAACTT 58.587 39.130 0.00 0.00 37.07 2.66
70 71 4.042271 ACATTATCCGGTTTTGGGAACT 57.958 40.909 0.00 0.00 37.07 3.01
71 72 4.201980 GCTACATTATCCGGTTTTGGGAAC 60.202 45.833 0.00 0.00 37.07 3.62
72 73 3.949113 GCTACATTATCCGGTTTTGGGAA 59.051 43.478 0.00 0.00 37.07 3.97
73 74 3.547746 GCTACATTATCCGGTTTTGGGA 58.452 45.455 0.00 0.00 38.10 4.37
74 75 2.289547 CGCTACATTATCCGGTTTTGGG 59.710 50.000 0.00 0.00 0.00 4.12
75 76 2.286772 GCGCTACATTATCCGGTTTTGG 60.287 50.000 0.00 0.00 0.00 3.28
76 77 2.598907 CGCGCTACATTATCCGGTTTTG 60.599 50.000 5.56 0.00 0.00 2.44
77 78 1.595794 CGCGCTACATTATCCGGTTTT 59.404 47.619 5.56 0.00 0.00 2.43
78 79 1.214367 CGCGCTACATTATCCGGTTT 58.786 50.000 5.56 0.00 0.00 3.27
79 80 0.103572 ACGCGCTACATTATCCGGTT 59.896 50.000 5.73 0.00 0.00 4.44
80 81 0.596600 CACGCGCTACATTATCCGGT 60.597 55.000 5.73 0.00 0.00 5.28
81 82 0.596600 ACACGCGCTACATTATCCGG 60.597 55.000 5.73 0.00 0.00 5.14
82 83 1.712350 GTACACGCGCTACATTATCCG 59.288 52.381 5.73 0.00 0.00 4.18
83 84 3.009301 AGTACACGCGCTACATTATCC 57.991 47.619 5.73 0.00 0.00 2.59
84 85 5.629097 AGATAGTACACGCGCTACATTATC 58.371 41.667 5.73 10.15 0.00 1.75
85 86 5.624344 AGATAGTACACGCGCTACATTAT 57.376 39.130 5.73 1.23 0.00 1.28
86 87 5.209977 CAAGATAGTACACGCGCTACATTA 58.790 41.667 5.73 0.00 0.00 1.90
87 88 3.984508 AGATAGTACACGCGCTACATT 57.015 42.857 5.73 0.00 0.00 2.71
88 89 3.066342 ACAAGATAGTACACGCGCTACAT 59.934 43.478 5.73 2.92 0.00 2.29
89 90 2.421073 ACAAGATAGTACACGCGCTACA 59.579 45.455 5.73 0.00 0.00 2.74
90 91 3.062323 ACAAGATAGTACACGCGCTAC 57.938 47.619 5.73 6.19 0.00 3.58
91 92 3.873361 ACTACAAGATAGTACACGCGCTA 59.127 43.478 5.73 0.00 0.00 4.26
92 93 2.681848 ACTACAAGATAGTACACGCGCT 59.318 45.455 5.73 0.00 0.00 5.92
93 94 3.062323 ACTACAAGATAGTACACGCGC 57.938 47.619 5.73 0.00 0.00 6.86
94 95 3.789756 CCAACTACAAGATAGTACACGCG 59.210 47.826 3.53 3.53 0.00 6.01
95 96 4.110482 CCCAACTACAAGATAGTACACGC 58.890 47.826 0.00 0.00 0.00 5.34
96 97 4.110482 GCCCAACTACAAGATAGTACACG 58.890 47.826 0.00 0.00 0.00 4.49
97 98 4.439968 GGCCCAACTACAAGATAGTACAC 58.560 47.826 0.00 0.00 0.00 2.90
98 99 3.131577 CGGCCCAACTACAAGATAGTACA 59.868 47.826 0.00 0.00 0.00 2.90
99 100 3.492137 CCGGCCCAACTACAAGATAGTAC 60.492 52.174 0.00 0.00 0.00 2.73
100 101 2.696707 CCGGCCCAACTACAAGATAGTA 59.303 50.000 0.00 0.00 0.00 1.82
101 102 1.485066 CCGGCCCAACTACAAGATAGT 59.515 52.381 0.00 0.00 0.00 2.12
102 103 1.810412 GCCGGCCCAACTACAAGATAG 60.810 57.143 18.11 0.00 0.00 2.08
103 104 0.179468 GCCGGCCCAACTACAAGATA 59.821 55.000 18.11 0.00 0.00 1.98
104 105 1.077716 GCCGGCCCAACTACAAGAT 60.078 57.895 18.11 0.00 0.00 2.40
105 106 2.349755 GCCGGCCCAACTACAAGA 59.650 61.111 18.11 0.00 0.00 3.02
106 107 2.750237 GGCCGGCCCAACTACAAG 60.750 66.667 36.64 0.00 0.00 3.16
119 120 3.207547 TAGCGATCACGATGGGCCG 62.208 63.158 0.00 0.00 42.66 6.13
120 121 1.373497 CTAGCGATCACGATGGGCC 60.373 63.158 0.00 0.00 42.66 5.80
121 122 4.251760 CTAGCGATCACGATGGGC 57.748 61.111 0.00 0.00 42.66 5.36
123 124 0.386100 CGACCTAGCGATCACGATGG 60.386 60.000 0.00 0.00 42.66 3.51
124 125 0.999228 GCGACCTAGCGATCACGATG 60.999 60.000 0.00 0.00 42.66 3.84
125 126 1.167155 AGCGACCTAGCGATCACGAT 61.167 55.000 0.00 0.00 43.00 3.73
126 127 1.773054 GAGCGACCTAGCGATCACGA 61.773 60.000 3.57 0.00 45.17 4.35
127 128 1.369448 GAGCGACCTAGCGATCACG 60.369 63.158 3.57 0.00 45.17 4.35
128 129 1.369448 CGAGCGACCTAGCGATCAC 60.369 63.158 8.39 0.00 46.05 3.06
129 130 3.023118 CGAGCGACCTAGCGATCA 58.977 61.111 8.39 0.00 46.05 2.92
130 131 2.427740 GCGAGCGACCTAGCGATC 60.428 66.667 0.00 0.00 42.68 3.69
134 135 3.878519 AGACGCGAGCGACCTAGC 61.879 66.667 24.72 5.91 42.83 3.42
135 136 2.023461 CAGACGCGAGCGACCTAG 59.977 66.667 24.72 7.29 42.83 3.02
136 137 2.745100 ACAGACGCGAGCGACCTA 60.745 61.111 24.72 0.00 42.83 3.08
137 138 4.406173 CACAGACGCGAGCGACCT 62.406 66.667 24.72 16.31 42.83 3.85
146 147 2.778997 CGAGCTAACGCACAGACGC 61.779 63.158 0.00 0.00 39.10 5.19
147 148 1.154282 TCGAGCTAACGCACAGACG 60.154 57.895 0.00 0.00 39.10 4.18
148 149 0.386858 TGTCGAGCTAACGCACAGAC 60.387 55.000 0.00 0.00 39.10 3.51
149 150 0.526211 ATGTCGAGCTAACGCACAGA 59.474 50.000 0.00 0.00 39.10 3.41
150 151 1.321743 GAATGTCGAGCTAACGCACAG 59.678 52.381 0.00 0.00 39.10 3.66
151 152 1.067846 AGAATGTCGAGCTAACGCACA 60.068 47.619 0.00 0.00 39.10 4.57
152 153 1.321743 CAGAATGTCGAGCTAACGCAC 59.678 52.381 0.00 0.00 39.10 5.34
153 154 1.629013 CAGAATGTCGAGCTAACGCA 58.371 50.000 0.00 0.00 39.10 5.24
154 155 0.299003 GCAGAATGTCGAGCTAACGC 59.701 55.000 0.00 0.00 39.31 4.84
155 156 0.924090 GGCAGAATGTCGAGCTAACG 59.076 55.000 0.00 0.00 39.31 3.18
164 165 0.379669 CCTCATTGCGGCAGAATGTC 59.620 55.000 12.87 0.00 39.31 3.06
165 166 1.033746 CCCTCATTGCGGCAGAATGT 61.034 55.000 12.87 0.00 39.31 2.71
166 167 1.033746 ACCCTCATTGCGGCAGAATG 61.034 55.000 1.67 5.51 40.87 2.67
167 168 0.749454 GACCCTCATTGCGGCAGAAT 60.749 55.000 1.67 0.00 0.00 2.40
168 169 1.377202 GACCCTCATTGCGGCAGAA 60.377 57.895 1.67 0.00 0.00 3.02
169 170 2.268920 GACCCTCATTGCGGCAGA 59.731 61.111 1.67 0.00 0.00 4.26
170 171 2.825836 GGACCCTCATTGCGGCAG 60.826 66.667 1.67 0.00 0.00 4.85
171 172 4.776322 CGGACCCTCATTGCGGCA 62.776 66.667 0.00 0.00 0.00 5.69
172 173 2.862674 TAACGGACCCTCATTGCGGC 62.863 60.000 0.00 0.00 31.13 6.53
173 174 0.810031 CTAACGGACCCTCATTGCGG 60.810 60.000 0.00 0.00 31.13 5.69
174 175 0.810031 CCTAACGGACCCTCATTGCG 60.810 60.000 0.00 0.00 0.00 4.85
175 176 0.539986 TCCTAACGGACCCTCATTGC 59.460 55.000 0.00 0.00 33.30 3.56
176 177 4.891992 ATATCCTAACGGACCCTCATTG 57.108 45.455 0.00 0.00 43.51 2.82
177 178 4.286291 GGAATATCCTAACGGACCCTCATT 59.714 45.833 0.00 0.00 43.51 2.57
178 179 3.838903 GGAATATCCTAACGGACCCTCAT 59.161 47.826 0.00 0.00 43.51 2.90
179 180 3.236896 GGAATATCCTAACGGACCCTCA 58.763 50.000 0.00 0.00 43.51 3.86
180 181 2.230750 CGGAATATCCTAACGGACCCTC 59.769 54.545 0.00 0.00 43.51 4.30
181 182 2.158415 TCGGAATATCCTAACGGACCCT 60.158 50.000 0.00 0.00 43.51 4.34
182 183 2.230750 CTCGGAATATCCTAACGGACCC 59.769 54.545 0.00 0.00 43.51 4.46
183 184 2.230750 CCTCGGAATATCCTAACGGACC 59.769 54.545 0.00 0.00 43.51 4.46
184 185 3.152341 TCCTCGGAATATCCTAACGGAC 58.848 50.000 0.00 0.00 43.51 4.79
185 186 3.513909 TCCTCGGAATATCCTAACGGA 57.486 47.619 0.00 0.00 45.16 4.69
186 187 4.595762 TTTCCTCGGAATATCCTAACGG 57.404 45.455 0.00 0.00 33.30 4.44
187 188 5.598769 ACTTTTCCTCGGAATATCCTAACG 58.401 41.667 0.00 0.00 33.30 3.18
188 189 6.927936 GGTACTTTTCCTCGGAATATCCTAAC 59.072 42.308 0.00 0.00 33.30 2.34
189 190 6.042437 GGGTACTTTTCCTCGGAATATCCTAA 59.958 42.308 0.00 0.00 33.30 2.69
190 191 5.541484 GGGTACTTTTCCTCGGAATATCCTA 59.459 44.000 0.00 0.00 33.30 2.94
191 192 4.347292 GGGTACTTTTCCTCGGAATATCCT 59.653 45.833 0.00 0.00 33.30 3.24
192 193 4.347292 AGGGTACTTTTCCTCGGAATATCC 59.653 45.833 0.00 0.00 33.79 2.59
193 194 5.548181 AGGGTACTTTTCCTCGGAATATC 57.452 43.478 0.00 0.00 33.79 1.63
194 195 7.441903 TTTAGGGTACTTTTCCTCGGAATAT 57.558 36.000 0.00 0.00 34.75 1.28
195 196 6.872585 TTTAGGGTACTTTTCCTCGGAATA 57.127 37.500 0.00 0.00 34.75 1.75
196 197 5.767277 TTTAGGGTACTTTTCCTCGGAAT 57.233 39.130 0.00 0.00 34.75 3.01
197 198 5.565455 TTTTAGGGTACTTTTCCTCGGAA 57.435 39.130 0.00 0.00 34.75 4.30
198 199 5.565455 TTTTTAGGGTACTTTTCCTCGGA 57.435 39.130 0.00 0.00 34.75 4.55
219 220 2.171003 CCTTTCCTCCGCCTGATTTTT 58.829 47.619 0.00 0.00 0.00 1.94
220 221 1.354368 TCCTTTCCTCCGCCTGATTTT 59.646 47.619 0.00 0.00 0.00 1.82
221 222 0.991920 TCCTTTCCTCCGCCTGATTT 59.008 50.000 0.00 0.00 0.00 2.17
222 223 0.991920 TTCCTTTCCTCCGCCTGATT 59.008 50.000 0.00 0.00 0.00 2.57
223 224 0.543749 CTTCCTTTCCTCCGCCTGAT 59.456 55.000 0.00 0.00 0.00 2.90
224 225 0.836400 ACTTCCTTTCCTCCGCCTGA 60.836 55.000 0.00 0.00 0.00 3.86
225 226 0.391793 GACTTCCTTTCCTCCGCCTG 60.392 60.000 0.00 0.00 0.00 4.85
226 227 0.545548 AGACTTCCTTTCCTCCGCCT 60.546 55.000 0.00 0.00 0.00 5.52
227 228 0.325272 AAGACTTCCTTTCCTCCGCC 59.675 55.000 0.00 0.00 0.00 6.13
228 229 1.276705 AGAAGACTTCCTTTCCTCCGC 59.723 52.381 11.67 0.00 34.68 5.54
229 230 2.829120 AGAGAAGACTTCCTTTCCTCCG 59.171 50.000 11.67 0.00 34.68 4.63
230 231 3.196901 GGAGAGAAGACTTCCTTTCCTCC 59.803 52.174 11.67 14.33 41.73 4.30
231 232 3.119280 CGGAGAGAAGACTTCCTTTCCTC 60.119 52.174 19.76 14.49 34.68 3.71
232 233 2.829120 CGGAGAGAAGACTTCCTTTCCT 59.171 50.000 19.76 8.90 34.68 3.36
233 234 2.826725 TCGGAGAGAAGACTTCCTTTCC 59.173 50.000 11.67 13.93 34.68 3.13
234 235 3.256136 TGTCGGAGAGAAGACTTCCTTTC 59.744 47.826 11.67 7.04 36.95 2.62
235 236 3.231818 TGTCGGAGAGAAGACTTCCTTT 58.768 45.455 11.67 0.00 36.95 3.11
236 237 2.877866 TGTCGGAGAGAAGACTTCCTT 58.122 47.619 11.67 0.17 36.95 3.36
237 238 2.588464 TGTCGGAGAGAAGACTTCCT 57.412 50.000 11.67 8.52 36.95 3.36
238 239 3.006003 AGTTTGTCGGAGAGAAGACTTCC 59.994 47.826 11.67 3.83 41.95 3.46
239 240 4.245845 AGTTTGTCGGAGAGAAGACTTC 57.754 45.455 7.14 7.14 41.95 3.01
240 241 5.068723 TGTTAGTTTGTCGGAGAGAAGACTT 59.931 40.000 0.00 0.00 41.95 3.01
241 242 4.583489 TGTTAGTTTGTCGGAGAGAAGACT 59.417 41.667 0.00 0.00 41.95 3.24
242 243 4.868067 TGTTAGTTTGTCGGAGAGAAGAC 58.132 43.478 0.00 0.00 41.95 3.01
243 244 4.022242 CCTGTTAGTTTGTCGGAGAGAAGA 60.022 45.833 0.00 0.00 41.95 2.87
244 245 4.238514 CCTGTTAGTTTGTCGGAGAGAAG 58.761 47.826 0.00 0.00 41.95 2.85
245 246 3.554337 GCCTGTTAGTTTGTCGGAGAGAA 60.554 47.826 0.00 0.00 38.29 2.87
246 247 2.029290 GCCTGTTAGTTTGTCGGAGAGA 60.029 50.000 0.00 0.00 36.95 3.10
247 248 2.338500 GCCTGTTAGTTTGTCGGAGAG 58.662 52.381 0.00 0.00 36.95 3.20
248 249 1.001633 GGCCTGTTAGTTTGTCGGAGA 59.998 52.381 0.00 0.00 0.00 3.71
249 250 1.439679 GGCCTGTTAGTTTGTCGGAG 58.560 55.000 0.00 0.00 0.00 4.63
250 251 0.035739 GGGCCTGTTAGTTTGTCGGA 59.964 55.000 0.84 0.00 0.00 4.55
251 252 0.250553 TGGGCCTGTTAGTTTGTCGG 60.251 55.000 4.53 0.00 0.00 4.79
252 253 1.265905 GTTGGGCCTGTTAGTTTGTCG 59.734 52.381 4.53 0.00 0.00 4.35
253 254 2.034179 GTGTTGGGCCTGTTAGTTTGTC 59.966 50.000 4.53 0.00 0.00 3.18
254 255 2.028876 GTGTTGGGCCTGTTAGTTTGT 58.971 47.619 4.53 0.00 0.00 2.83
255 256 2.028130 TGTGTTGGGCCTGTTAGTTTG 58.972 47.619 4.53 0.00 0.00 2.93
256 257 2.028876 GTGTGTTGGGCCTGTTAGTTT 58.971 47.619 4.53 0.00 0.00 2.66
257 258 1.064314 TGTGTGTTGGGCCTGTTAGTT 60.064 47.619 4.53 0.00 0.00 2.24
258 259 0.548989 TGTGTGTTGGGCCTGTTAGT 59.451 50.000 4.53 0.00 0.00 2.24
259 260 0.951558 GTGTGTGTTGGGCCTGTTAG 59.048 55.000 4.53 0.00 0.00 2.34
260 261 0.256177 TGTGTGTGTTGGGCCTGTTA 59.744 50.000 4.53 0.00 0.00 2.41
261 262 0.613292 TTGTGTGTGTTGGGCCTGTT 60.613 50.000 4.53 0.00 0.00 3.16
262 263 0.613292 TTTGTGTGTGTTGGGCCTGT 60.613 50.000 4.53 0.00 0.00 4.00
263 264 0.534412 TTTTGTGTGTGTTGGGCCTG 59.466 50.000 4.53 0.00 0.00 4.85
264 265 1.066502 GTTTTTGTGTGTGTTGGGCCT 60.067 47.619 4.53 0.00 0.00 5.19
265 266 1.338200 TGTTTTTGTGTGTGTTGGGCC 60.338 47.619 0.00 0.00 0.00 5.80
266 267 2.086054 TGTTTTTGTGTGTGTTGGGC 57.914 45.000 0.00 0.00 0.00 5.36
267 268 3.809832 TGTTTGTTTTTGTGTGTGTTGGG 59.190 39.130 0.00 0.00 0.00 4.12
268 269 5.409643 TTGTTTGTTTTTGTGTGTGTTGG 57.590 34.783 0.00 0.00 0.00 3.77
269 270 6.250819 TGTTTGTTTGTTTTTGTGTGTGTTG 58.749 32.000 0.00 0.00 0.00 3.33
270 271 6.422776 TGTTTGTTTGTTTTTGTGTGTGTT 57.577 29.167 0.00 0.00 0.00 3.32
271 272 6.092807 ACTTGTTTGTTTGTTTTTGTGTGTGT 59.907 30.769 0.00 0.00 0.00 3.72
272 273 6.481984 ACTTGTTTGTTTGTTTTTGTGTGTG 58.518 32.000 0.00 0.00 0.00 3.82
273 274 6.670077 ACTTGTTTGTTTGTTTTTGTGTGT 57.330 29.167 0.00 0.00 0.00 3.72
274 275 9.490663 TTTTACTTGTTTGTTTGTTTTTGTGTG 57.509 25.926 0.00 0.00 0.00 3.82
275 276 9.709600 CTTTTACTTGTTTGTTTGTTTTTGTGT 57.290 25.926 0.00 0.00 0.00 3.72
276 277 9.922305 TCTTTTACTTGTTTGTTTGTTTTTGTG 57.078 25.926 0.00 0.00 0.00 3.33
280 281 8.984764 GGTCTCTTTTACTTGTTTGTTTGTTTT 58.015 29.630 0.00 0.00 0.00 2.43
281 282 8.145122 TGGTCTCTTTTACTTGTTTGTTTGTTT 58.855 29.630 0.00 0.00 0.00 2.83
282 283 7.597369 GTGGTCTCTTTTACTTGTTTGTTTGTT 59.403 33.333 0.00 0.00 0.00 2.83
283 284 7.088272 GTGGTCTCTTTTACTTGTTTGTTTGT 58.912 34.615 0.00 0.00 0.00 2.83
284 285 7.087639 TGTGGTCTCTTTTACTTGTTTGTTTG 58.912 34.615 0.00 0.00 0.00 2.93
285 286 7.222000 TGTGGTCTCTTTTACTTGTTTGTTT 57.778 32.000 0.00 0.00 0.00 2.83
286 287 6.827586 TGTGGTCTCTTTTACTTGTTTGTT 57.172 33.333 0.00 0.00 0.00 2.83
287 288 6.827586 TTGTGGTCTCTTTTACTTGTTTGT 57.172 33.333 0.00 0.00 0.00 2.83
288 289 7.812669 ACTTTTGTGGTCTCTTTTACTTGTTTG 59.187 33.333 0.00 0.00 0.00 2.93
289 290 7.812669 CACTTTTGTGGTCTCTTTTACTTGTTT 59.187 33.333 0.00 0.00 46.16 2.83
290 291 7.312899 CACTTTTGTGGTCTCTTTTACTTGTT 58.687 34.615 0.00 0.00 46.16 2.83
291 292 6.852664 CACTTTTGTGGTCTCTTTTACTTGT 58.147 36.000 0.00 0.00 46.16 3.16
307 308 3.820557 AGTATGACACCAGCACTTTTGT 58.179 40.909 0.00 0.00 0.00 2.83
308 309 4.836125 AAGTATGACACCAGCACTTTTG 57.164 40.909 0.00 0.00 31.38 2.44
309 310 5.865085 TCTAAGTATGACACCAGCACTTTT 58.135 37.500 0.00 0.00 34.92 2.27
310 311 5.483685 TCTAAGTATGACACCAGCACTTT 57.516 39.130 0.00 0.00 34.92 2.66
311 312 5.046304 ACATCTAAGTATGACACCAGCACTT 60.046 40.000 0.00 0.00 36.27 3.16
312 313 4.467795 ACATCTAAGTATGACACCAGCACT 59.532 41.667 0.00 0.00 0.00 4.40
313 314 4.568359 CACATCTAAGTATGACACCAGCAC 59.432 45.833 0.00 0.00 0.00 4.40
314 315 4.466015 TCACATCTAAGTATGACACCAGCA 59.534 41.667 0.00 0.00 0.00 4.41
315 316 5.011090 TCACATCTAAGTATGACACCAGC 57.989 43.478 0.00 0.00 0.00 4.85
316 317 6.456795 TCTCACATCTAAGTATGACACCAG 57.543 41.667 0.00 0.00 0.00 4.00
317 318 8.712228 ATATCTCACATCTAAGTATGACACCA 57.288 34.615 0.00 0.00 0.00 4.17
336 337 8.911965 TGGCATCTAGATGTGAGATAATATCTC 58.088 37.037 28.92 20.33 45.28 2.75
337 338 8.835550 TGGCATCTAGATGTGAGATAATATCT 57.164 34.615 28.92 1.83 40.62 1.98
346 347 9.539825 GGTTAATATATGGCATCTAGATGTGAG 57.460 37.037 28.92 8.76 40.80 3.51
347 348 8.486210 GGGTTAATATATGGCATCTAGATGTGA 58.514 37.037 28.92 18.25 40.80 3.58
348 349 8.267183 TGGGTTAATATATGGCATCTAGATGTG 58.733 37.037 28.92 11.34 40.80 3.21
349 350 8.392631 TGGGTTAATATATGGCATCTAGATGT 57.607 34.615 28.92 15.26 40.80 3.06
352 353 9.500701 TGTATGGGTTAATATATGGCATCTAGA 57.499 33.333 1.65 0.00 0.00 2.43
368 369 9.719355 CAGTGTAGCATATTAATGTATGGGTTA 57.281 33.333 0.00 0.00 35.38 2.85
369 370 8.217799 ACAGTGTAGCATATTAATGTATGGGTT 58.782 33.333 0.00 0.00 35.38 4.11
370 371 7.745717 ACAGTGTAGCATATTAATGTATGGGT 58.254 34.615 0.00 0.00 35.38 4.51
371 372 8.506437 CAACAGTGTAGCATATTAATGTATGGG 58.494 37.037 0.00 0.00 35.38 4.00
372 373 9.056005 ACAACAGTGTAGCATATTAATGTATGG 57.944 33.333 0.00 0.00 35.72 2.74
394 395 6.262601 TCTTGAAAACGATGAAGGAAACAAC 58.737 36.000 0.00 0.00 0.00 3.32
401 402 4.065088 TGTCCTCTTGAAAACGATGAAGG 58.935 43.478 0.00 0.00 0.00 3.46
446 447 7.400052 AGACCCAGAAACTTGGCAAAATATTAT 59.600 33.333 0.00 0.00 36.88 1.28
451 452 3.308401 AGACCCAGAAACTTGGCAAAAT 58.692 40.909 0.00 0.00 36.88 1.82
452 453 2.745968 AGACCCAGAAACTTGGCAAAA 58.254 42.857 0.00 0.00 36.88 2.44
454 455 2.306847 GAAGACCCAGAAACTTGGCAA 58.693 47.619 0.00 0.00 36.88 4.52
462 463 6.962182 AGATAACATGATGAAGACCCAGAAA 58.038 36.000 0.00 0.00 0.00 2.52
537 2296 3.008835 TGCCCCTTGAAATGAGATCTG 57.991 47.619 0.00 0.00 0.00 2.90
584 2343 1.065273 CAAATGCTCTCGCCATGCC 59.935 57.895 0.00 0.00 34.43 4.40
585 2344 1.588139 GCAAATGCTCTCGCCATGC 60.588 57.895 0.00 0.00 38.21 4.06
586 2345 0.171679 TTGCAAATGCTCTCGCCATG 59.828 50.000 6.97 0.00 42.66 3.66
587 2346 0.454600 CTTGCAAATGCTCTCGCCAT 59.545 50.000 0.00 0.00 42.66 4.40
588 2347 0.890542 ACTTGCAAATGCTCTCGCCA 60.891 50.000 0.00 0.00 42.66 5.69
589 2348 0.455633 CACTTGCAAATGCTCTCGCC 60.456 55.000 0.00 0.00 42.66 5.54
590 2349 0.239347 ACACTTGCAAATGCTCTCGC 59.761 50.000 8.00 0.00 42.66 5.03
591 2350 1.135859 GGACACTTGCAAATGCTCTCG 60.136 52.381 8.00 0.00 42.66 4.04
593 2352 1.202976 AGGGACACTTGCAAATGCTCT 60.203 47.619 8.00 3.36 42.66 4.09
594 2353 1.251251 AGGGACACTTGCAAATGCTC 58.749 50.000 8.00 5.00 42.66 4.26
595 2354 2.584835 TAGGGACACTTGCAAATGCT 57.415 45.000 8.00 0.00 42.66 3.79
596 2355 2.099756 GGATAGGGACACTTGCAAATGC 59.900 50.000 8.00 0.77 42.50 3.56
597 2356 2.355756 CGGATAGGGACACTTGCAAATG 59.644 50.000 6.30 6.30 0.00 2.32
598 2357 2.026262 ACGGATAGGGACACTTGCAAAT 60.026 45.455 0.00 0.00 0.00 2.32
599 2358 1.349688 ACGGATAGGGACACTTGCAAA 59.650 47.619 0.00 0.00 0.00 3.68
600 2359 0.981183 ACGGATAGGGACACTTGCAA 59.019 50.000 0.00 0.00 0.00 4.08
601 2360 0.981183 AACGGATAGGGACACTTGCA 59.019 50.000 0.00 0.00 0.00 4.08
602 2361 1.369625 CAACGGATAGGGACACTTGC 58.630 55.000 0.00 0.00 0.00 4.01
603 2362 1.278127 ACCAACGGATAGGGACACTTG 59.722 52.381 0.00 0.00 0.00 3.16
604 2363 1.652947 ACCAACGGATAGGGACACTT 58.347 50.000 0.00 0.00 0.00 3.16
605 2364 1.553704 GAACCAACGGATAGGGACACT 59.446 52.381 0.00 0.00 0.00 3.55
606 2365 1.276989 TGAACCAACGGATAGGGACAC 59.723 52.381 0.00 0.00 0.00 3.67
607 2366 1.646912 TGAACCAACGGATAGGGACA 58.353 50.000 0.00 0.00 0.00 4.02
608 2367 2.943033 CAATGAACCAACGGATAGGGAC 59.057 50.000 0.00 0.00 0.00 4.46
609 2368 2.682563 GCAATGAACCAACGGATAGGGA 60.683 50.000 0.00 0.00 0.00 4.20
610 2369 1.676006 GCAATGAACCAACGGATAGGG 59.324 52.381 0.00 0.00 0.00 3.53
611 2370 2.364632 TGCAATGAACCAACGGATAGG 58.635 47.619 0.00 0.00 0.00 2.57
612 2371 4.433186 TTTGCAATGAACCAACGGATAG 57.567 40.909 0.00 0.00 0.00 2.08
613 2372 4.038042 TGTTTTGCAATGAACCAACGGATA 59.962 37.500 10.68 0.00 0.00 2.59
614 2373 3.181471 TGTTTTGCAATGAACCAACGGAT 60.181 39.130 10.68 0.00 0.00 4.18
615 2374 2.166459 TGTTTTGCAATGAACCAACGGA 59.834 40.909 10.68 0.00 0.00 4.69
616 2375 2.283884 GTGTTTTGCAATGAACCAACGG 59.716 45.455 10.68 0.00 0.00 4.44
617 2376 2.283884 GGTGTTTTGCAATGAACCAACG 59.716 45.455 16.12 0.00 0.00 4.10
618 2377 3.265791 TGGTGTTTTGCAATGAACCAAC 58.734 40.909 19.64 12.18 34.85 3.77
619 2378 3.529533 CTGGTGTTTTGCAATGAACCAA 58.470 40.909 21.26 10.64 37.25 3.67
620 2379 2.741228 GCTGGTGTTTTGCAATGAACCA 60.741 45.455 20.28 20.28 36.33 3.67
621 2380 1.866601 GCTGGTGTTTTGCAATGAACC 59.133 47.619 14.79 14.79 0.00 3.62
622 2381 2.284952 GTGCTGGTGTTTTGCAATGAAC 59.715 45.455 0.00 3.21 38.50 3.18
623 2382 2.093816 TGTGCTGGTGTTTTGCAATGAA 60.094 40.909 0.00 0.00 38.50 2.57
624 2383 1.479730 TGTGCTGGTGTTTTGCAATGA 59.520 42.857 0.00 0.00 38.50 2.57
625 2384 1.937278 TGTGCTGGTGTTTTGCAATG 58.063 45.000 0.00 0.00 38.50 2.82
626 2385 2.548493 GGATGTGCTGGTGTTTTGCAAT 60.548 45.455 0.00 0.00 38.50 3.56
627 2386 1.202510 GGATGTGCTGGTGTTTTGCAA 60.203 47.619 0.00 0.00 38.50 4.08
628 2387 0.388659 GGATGTGCTGGTGTTTTGCA 59.611 50.000 0.00 0.00 0.00 4.08
629 2388 0.319813 GGGATGTGCTGGTGTTTTGC 60.320 55.000 0.00 0.00 0.00 3.68
630 2389 1.039068 TGGGATGTGCTGGTGTTTTG 58.961 50.000 0.00 0.00 0.00 2.44
631 2390 1.039856 GTGGGATGTGCTGGTGTTTT 58.960 50.000 0.00 0.00 0.00 2.43
632 2391 0.827507 GGTGGGATGTGCTGGTGTTT 60.828 55.000 0.00 0.00 0.00 2.83
633 2392 1.228552 GGTGGGATGTGCTGGTGTT 60.229 57.895 0.00 0.00 0.00 3.32
634 2393 2.436109 GGTGGGATGTGCTGGTGT 59.564 61.111 0.00 0.00 0.00 4.16
635 2394 1.973281 GTGGTGGGATGTGCTGGTG 60.973 63.158 0.00 0.00 0.00 4.17
636 2395 2.436109 GTGGTGGGATGTGCTGGT 59.564 61.111 0.00 0.00 0.00 4.00
637 2396 2.361610 GGTGGTGGGATGTGCTGG 60.362 66.667 0.00 0.00 0.00 4.85
638 2397 2.747460 CGGTGGTGGGATGTGCTG 60.747 66.667 0.00 0.00 0.00 4.41
639 2398 2.927856 TCGGTGGTGGGATGTGCT 60.928 61.111 0.00 0.00 0.00 4.40
640 2399 2.436646 CTCGGTGGTGGGATGTGC 60.437 66.667 0.00 0.00 0.00 4.57
641 2400 2.268920 CCTCGGTGGTGGGATGTG 59.731 66.667 0.00 0.00 0.00 3.21
658 2417 0.228742 CAAGTGTACGTGCGTGACAC 59.771 55.000 19.49 19.49 46.45 3.67
659 2418 0.100861 TCAAGTGTACGTGCGTGACA 59.899 50.000 7.55 5.43 0.00 3.58
660 2419 0.776451 CTCAAGTGTACGTGCGTGAC 59.224 55.000 7.55 4.31 0.00 3.67
661 2420 0.664224 TCTCAAGTGTACGTGCGTGA 59.336 50.000 7.55 1.11 0.00 4.35
662 2421 1.053048 CTCTCAAGTGTACGTGCGTG 58.947 55.000 7.55 0.00 0.00 5.34
663 2422 0.663568 GCTCTCAAGTGTACGTGCGT 60.664 55.000 0.00 2.05 0.00 5.24
664 2423 0.663269 TGCTCTCAAGTGTACGTGCG 60.663 55.000 0.00 0.00 0.00 5.34
665 2424 0.784778 GTGCTCTCAAGTGTACGTGC 59.215 55.000 0.00 0.00 0.00 5.34
666 2425 1.053048 CGTGCTCTCAAGTGTACGTG 58.947 55.000 12.49 0.00 40.73 4.49
667 2426 0.039437 CCGTGCTCTCAAGTGTACGT 60.039 55.000 17.15 0.00 42.83 3.57
668 2427 0.732880 CCCGTGCTCTCAAGTGTACG 60.733 60.000 13.39 13.39 43.55 3.67
669 2428 0.389948 CCCCGTGCTCTCAAGTGTAC 60.390 60.000 0.00 0.00 0.00 2.90
670 2429 1.972198 CCCCGTGCTCTCAAGTGTA 59.028 57.895 0.00 0.00 0.00 2.90
671 2430 2.743718 CCCCGTGCTCTCAAGTGT 59.256 61.111 0.00 0.00 0.00 3.55
672 2431 2.743928 GCCCCGTGCTCTCAAGTG 60.744 66.667 0.00 0.00 36.87 3.16
673 2432 3.241530 TGCCCCGTGCTCTCAAGT 61.242 61.111 0.00 0.00 42.00 3.16
674 2433 2.435586 CTGCCCCGTGCTCTCAAG 60.436 66.667 0.00 0.00 42.00 3.02
675 2434 2.922503 TCTGCCCCGTGCTCTCAA 60.923 61.111 0.00 0.00 42.00 3.02
676 2435 3.385384 CTCTGCCCCGTGCTCTCA 61.385 66.667 0.00 0.00 42.00 3.27
677 2436 4.154347 CCTCTGCCCCGTGCTCTC 62.154 72.222 0.00 0.00 42.00 3.20
688 2447 3.441290 CTGCTTGCTGCCCTCTGC 61.441 66.667 0.00 0.00 42.00 4.26
689 2448 3.441290 GCTGCTTGCTGCCCTCTG 61.441 66.667 12.43 0.00 42.00 3.35
690 2449 3.962694 TGCTGCTTGCTGCCCTCT 61.963 61.111 18.93 0.00 43.37 3.69
691 2450 3.745803 GTGCTGCTTGCTGCCCTC 61.746 66.667 18.93 8.27 43.37 4.30
692 2451 4.591399 TGTGCTGCTTGCTGCCCT 62.591 61.111 18.93 0.00 43.37 5.19
693 2452 3.569049 CTTGTGCTGCTTGCTGCCC 62.569 63.158 18.93 10.33 43.37 5.36
694 2453 2.049433 CTTGTGCTGCTTGCTGCC 60.049 61.111 18.93 12.05 43.37 4.85
695 2454 2.733593 GCTTGTGCTGCTTGCTGC 60.734 61.111 15.80 15.80 43.37 5.25
696 2455 1.066752 TTGCTTGTGCTGCTTGCTG 59.933 52.632 0.00 0.00 43.37 4.41
697 2456 1.066918 GTTGCTTGTGCTGCTTGCT 59.933 52.632 0.00 0.00 43.37 3.91
698 2457 1.227031 TGTTGCTTGTGCTGCTTGC 60.227 52.632 0.00 0.66 40.48 4.01
699 2458 1.204228 CGTGTTGCTTGTGCTGCTTG 61.204 55.000 0.00 0.00 40.48 4.01
700 2459 1.064621 CGTGTTGCTTGTGCTGCTT 59.935 52.632 0.00 0.00 40.48 3.91
701 2460 2.717485 CGTGTTGCTTGTGCTGCT 59.283 55.556 0.00 0.00 40.48 4.24
702 2461 3.026311 GCGTGTTGCTTGTGCTGC 61.026 61.111 0.00 0.00 41.73 5.25
703 2462 1.008194 ATGCGTGTTGCTTGTGCTG 60.008 52.632 0.00 0.00 46.63 4.41
704 2463 1.008194 CATGCGTGTTGCTTGTGCT 60.008 52.632 0.00 0.00 46.63 4.40
705 2464 3.529504 CATGCGTGTTGCTTGTGC 58.470 55.556 0.00 0.00 46.63 4.57
709 2468 0.737804 TGTTGACATGCGTGTTGCTT 59.262 45.000 13.92 0.00 46.63 3.91
710 2469 0.308684 CTGTTGACATGCGTGTTGCT 59.691 50.000 13.92 0.00 46.63 3.91
711 2470 1.270777 GCTGTTGACATGCGTGTTGC 61.271 55.000 13.92 9.18 46.70 4.17
712 2471 0.029167 TGCTGTTGACATGCGTGTTG 59.971 50.000 13.92 3.20 39.09 3.33
713 2472 0.029300 GTGCTGTTGACATGCGTGTT 59.971 50.000 13.92 0.00 39.09 3.32
714 2473 0.815213 AGTGCTGTTGACATGCGTGT 60.815 50.000 12.38 12.38 42.49 4.49
715 2474 0.110509 GAGTGCTGTTGACATGCGTG 60.111 55.000 3.82 3.82 0.00 5.34
716 2475 0.250038 AGAGTGCTGTTGACATGCGT 60.250 50.000 0.00 0.00 0.00 5.24
717 2476 0.441533 GAGAGTGCTGTTGACATGCG 59.558 55.000 0.00 0.00 0.00 4.73
718 2477 1.805869 AGAGAGTGCTGTTGACATGC 58.194 50.000 0.00 0.00 0.00 4.06
719 2478 4.446994 TCTAGAGAGTGCTGTTGACATG 57.553 45.455 0.00 0.00 0.00 3.21
720 2479 4.620332 GCTTCTAGAGAGTGCTGTTGACAT 60.620 45.833 0.00 0.00 0.00 3.06
721 2480 3.305676 GCTTCTAGAGAGTGCTGTTGACA 60.306 47.826 0.00 0.00 0.00 3.58
729 2488 1.650825 GGCTTGCTTCTAGAGAGTGC 58.349 55.000 0.00 0.00 0.00 4.40
748 2507 3.361977 CCCCTTTCCGGCAACACG 61.362 66.667 0.00 0.00 0.00 4.49
766 2525 3.781770 GAGAGCGAGCCACCATCGG 62.782 68.421 0.00 0.00 40.50 4.18
767 2526 2.279120 GAGAGCGAGCCACCATCG 60.279 66.667 0.00 0.00 43.00 3.84
933 3792 0.609406 GAGAAGTGGGGGTTCTTGGC 60.609 60.000 0.00 0.00 34.30 4.52
934 3793 0.321653 CGAGAAGTGGGGGTTCTTGG 60.322 60.000 0.00 0.00 34.30 3.61
935 3794 0.955919 GCGAGAAGTGGGGGTTCTTG 60.956 60.000 0.00 0.00 38.15 3.02
936 3795 1.375326 GCGAGAAGTGGGGGTTCTT 59.625 57.895 0.00 0.00 34.30 2.52
937 3796 2.593956 GGCGAGAAGTGGGGGTTCT 61.594 63.158 0.00 0.00 36.95 3.01
938 3797 2.046217 GGCGAGAAGTGGGGGTTC 60.046 66.667 0.00 0.00 0.00 3.62
939 3798 2.852075 TGGCGAGAAGTGGGGGTT 60.852 61.111 0.00 0.00 0.00 4.11
940 3799 3.637273 GTGGCGAGAAGTGGGGGT 61.637 66.667 0.00 0.00 0.00 4.95
941 3800 4.410400 GGTGGCGAGAAGTGGGGG 62.410 72.222 0.00 0.00 0.00 5.40
942 3801 4.760047 CGGTGGCGAGAAGTGGGG 62.760 72.222 0.00 0.00 0.00 4.96
2905 12699 7.712639 TGCATGGAACTAAACTTTTTATGCAAA 59.287 29.630 0.00 0.00 43.47 3.68
2940 12737 9.377383 ACGATATAAACAAGAAAAACTGAAACG 57.623 29.630 0.00 0.00 0.00 3.60
3020 12818 6.426587 AGTTAACTAGCCCATCATGATTTGT 58.573 36.000 6.26 0.00 0.00 2.83
3155 12953 4.993905 AGTTTTGTGTTGTTGGAAGCTAC 58.006 39.130 0.00 0.00 0.00 3.58
3239 13037 0.654683 GTGCATGGCAGATTCGAGAC 59.345 55.000 0.00 0.00 40.08 3.36
3372 13170 9.490379 ACATCCAACTACTTTACTTTTCTACAG 57.510 33.333 0.00 0.00 0.00 2.74
3505 13303 3.275143 TGTTATGAATTGGGCGTACTGG 58.725 45.455 0.00 0.00 0.00 4.00
3633 13431 9.075678 CTCTTATATTTCTTTACGGAGGGAGTA 57.924 37.037 0.00 0.00 0.00 2.59
3634 13432 7.783596 TCTCTTATATTTCTTTACGGAGGGAGT 59.216 37.037 0.00 0.00 0.00 3.85
3635 13433 8.179509 TCTCTTATATTTCTTTACGGAGGGAG 57.820 38.462 0.00 0.00 0.00 4.30
3636 13434 7.783596 ACTCTCTTATATTTCTTTACGGAGGGA 59.216 37.037 0.00 0.00 0.00 4.20
3637 13435 7.953752 ACTCTCTTATATTTCTTTACGGAGGG 58.046 38.462 0.00 0.00 0.00 4.30
3638 13436 9.819267 AAACTCTCTTATATTTCTTTACGGAGG 57.181 33.333 0.00 0.00 0.00 4.30
3665 13463 9.733219 GCGTTTAGATCACTACTTTAGTAATCT 57.267 33.333 4.72 4.72 37.23 2.40
3666 13464 9.733219 AGCGTTTAGATCACTACTTTAGTAATC 57.267 33.333 0.00 0.00 37.23 1.75
3667 13465 9.733219 GAGCGTTTAGATCACTACTTTAGTAAT 57.267 33.333 0.00 0.00 37.23 1.89
3668 13466 8.954350 AGAGCGTTTAGATCACTACTTTAGTAA 58.046 33.333 0.00 0.00 37.82 2.24
3669 13467 8.503458 AGAGCGTTTAGATCACTACTTTAGTA 57.497 34.615 0.00 0.00 37.82 1.82
3670 13468 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
3671 13469 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
3678 13476 9.601217 AACAAATATAAGAGCGTTTAGATCACT 57.399 29.630 0.00 0.00 37.82 3.41
3686 13484 8.665685 CCTCTGTAAACAAATATAAGAGCGTTT 58.334 33.333 0.00 0.00 0.00 3.60
3687 13485 7.280205 CCCTCTGTAAACAAATATAAGAGCGTT 59.720 37.037 0.00 0.00 0.00 4.84
3688 13486 6.761714 CCCTCTGTAAACAAATATAAGAGCGT 59.238 38.462 0.00 0.00 0.00 5.07
3689 13487 6.984474 TCCCTCTGTAAACAAATATAAGAGCG 59.016 38.462 0.00 0.00 0.00 5.03
3690 13488 7.988028 ACTCCCTCTGTAAACAAATATAAGAGC 59.012 37.037 0.00 0.00 0.00 4.09
3697 13495 9.710818 AGATACTACTCCCTCTGTAAACAAATA 57.289 33.333 0.00 0.00 0.00 1.40
3698 13496 8.611051 AGATACTACTCCCTCTGTAAACAAAT 57.389 34.615 0.00 0.00 0.00 2.32
3699 13497 8.431910 AAGATACTACTCCCTCTGTAAACAAA 57.568 34.615 0.00 0.00 0.00 2.83
3700 13498 8.964772 GTAAGATACTACTCCCTCTGTAAACAA 58.035 37.037 0.00 0.00 0.00 2.83
3701 13499 8.111545 TGTAAGATACTACTCCCTCTGTAAACA 58.888 37.037 0.00 0.00 0.00 2.83
3702 13500 8.517062 TGTAAGATACTACTCCCTCTGTAAAC 57.483 38.462 0.00 0.00 0.00 2.01
3703 13501 9.710818 ATTGTAAGATACTACTCCCTCTGTAAA 57.289 33.333 0.00 0.00 0.00 2.01
3706 13504 9.523168 GATATTGTAAGATACTACTCCCTCTGT 57.477 37.037 0.00 0.00 0.00 3.41
3707 13505 8.962679 GGATATTGTAAGATACTACTCCCTCTG 58.037 40.741 0.00 0.00 0.00 3.35
3708 13506 8.907050 AGGATATTGTAAGATACTACTCCCTCT 58.093 37.037 0.00 0.00 0.00 3.69
3709 13507 9.536510 AAGGATATTGTAAGATACTACTCCCTC 57.463 37.037 0.00 0.00 0.00 4.30
3710 13508 9.315363 CAAGGATATTGTAAGATACTACTCCCT 57.685 37.037 0.00 0.00 0.00 4.20
3711 13509 8.035984 GCAAGGATATTGTAAGATACTACTCCC 58.964 40.741 0.00 0.00 0.00 4.30
3768 13566 6.857964 GCAGACCAATAATCAATAACGGAATG 59.142 38.462 0.00 0.00 0.00 2.67
3771 13569 5.527214 CAGCAGACCAATAATCAATAACGGA 59.473 40.000 0.00 0.00 0.00 4.69
4194 14008 2.012673 GCAGGACCATCAACTCATCAC 58.987 52.381 0.00 0.00 0.00 3.06
4293 14175 2.846193 ACGGCATGTAAACTCAAGTGT 58.154 42.857 0.00 0.00 0.00 3.55
4418 14300 9.715123 GGTGAATTCTGTTTAAAACAAAATTGG 57.285 29.630 7.05 0.00 40.93 3.16
4484 14366 1.140312 AGCTTCAGGTCCAGTGGAAA 58.860 50.000 15.09 3.40 31.38 3.13
4524 14421 0.396811 ACACTTAGTTTCCTGCGCCT 59.603 50.000 4.18 0.00 0.00 5.52
4525 14422 0.517316 CACACTTAGTTTCCTGCGCC 59.483 55.000 4.18 0.00 0.00 6.53
4758 14657 3.177884 AGCACCTCCCTGCACCAA 61.178 61.111 0.00 0.00 39.86 3.67
4768 14667 4.730657 CATTTCAGTCATTTCAGCACCTC 58.269 43.478 0.00 0.00 0.00 3.85
4770 14669 3.248266 GCATTTCAGTCATTTCAGCACC 58.752 45.455 0.00 0.00 0.00 5.01
4808 14707 8.070171 CAGTACAATCAACACTTAAACTCAAGG 58.930 37.037 0.00 0.00 0.00 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.