Multiple sequence alignment - TraesCS7A01G117700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G117700 chr7A 100.000 3783 0 0 1 3783 76121497 76125279 0.000000e+00 6986
1 TraesCS7A01G117700 chr7A 98.333 180 1 2 1359 1538 630034520 630034343 7.890000e-82 315
2 TraesCS7A01G117700 chr7B 88.770 1220 78 24 2477 3649 11962232 11963439 0.000000e+00 1439
3 TraesCS7A01G117700 chr7B 86.721 866 86 17 1554 2409 11961343 11962189 0.000000e+00 935
4 TraesCS7A01G117700 chr7B 86.351 740 75 18 635 1359 11960606 11961334 0.000000e+00 784
5 TraesCS7A01G117700 chr7B 85.873 630 67 12 1 618 11959914 11960533 0.000000e+00 651
6 TraesCS7A01G117700 chr7B 95.288 191 6 3 1359 1549 59059869 59060056 2.210000e-77 300
7 TraesCS7A01G117700 chr7D 85.714 1386 116 41 1 1370 69593288 69594607 0.000000e+00 1387
8 TraesCS7A01G117700 chr7D 85.353 1106 97 25 2106 3166 69595848 69596933 0.000000e+00 1085
9 TraesCS7A01G117700 chr7D 87.352 506 47 12 1540 2035 69594591 69595089 7.090000e-157 564
10 TraesCS7A01G117700 chr7D 93.407 273 12 2 1837 2109 69595491 69595757 2.120000e-107 399
11 TraesCS7A01G117700 chr7D 84.066 182 22 5 3468 3648 69597295 69597470 6.500000e-38 169
12 TraesCS7A01G117700 chr1A 100.000 174 0 0 1365 1538 276573460 276573287 4.710000e-84 322
13 TraesCS7A01G117700 chr1A 94.949 198 6 4 1361 1557 249045027 249045221 1.320000e-79 307
14 TraesCS7A01G117700 chr4A 100.000 173 0 0 1369 1541 602875155 602875327 1.700000e-83 320
15 TraesCS7A01G117700 chr4B 98.876 178 2 0 1365 1542 413121372 413121195 6.100000e-83 318
16 TraesCS7A01G117700 chr6B 98.333 180 1 2 1362 1540 159369575 159369753 7.890000e-82 315
17 TraesCS7A01G117700 chr6B 98.333 180 2 1 1370 1549 717967247 717967069 7.890000e-82 315
18 TraesCS7A01G117700 chr2A 97.802 182 2 2 1356 1537 482696515 482696694 2.840000e-81 313


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G117700 chr7A 76121497 76125279 3782 False 6986.00 6986 100.00000 1 3783 1 chr7A.!!$F1 3782
1 TraesCS7A01G117700 chr7B 11959914 11963439 3525 False 952.25 1439 86.92875 1 3649 4 chr7B.!!$F2 3648
2 TraesCS7A01G117700 chr7D 69593288 69597470 4182 False 720.80 1387 87.17840 1 3648 5 chr7D.!!$F1 3647

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
888 981 0.555769 ACCTGTGGCCTCCTTTGAAA 59.444 50.0 3.32 0.0 0.0 2.69 F
1410 1505 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.0 0.00 0.0 34.1 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1854 2553 0.030638 AGCCACAATGTGCGTTTGAC 59.969 50.0 8.05 0.0 31.34 3.18 R
3397 4441 0.108520 TCTCGGTAACCACGCCATTC 60.109 55.0 0.00 0.0 0.00 2.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.382695 TTCCCCATCCTCCCTCGAC 60.383 63.158 0.00 0.00 0.00 4.20
28 29 1.448922 CCATCCTCCCTCGACTCGAC 61.449 65.000 0.00 0.00 0.00 4.20
35 36 2.708255 CTCGACTCGACGCCCTAC 59.292 66.667 0.00 0.00 0.00 3.18
120 124 1.152943 ATAGCTCTCGAGGTCGGCA 60.153 57.895 13.56 4.43 40.09 5.69
169 177 2.690510 GGCCAAGCCCCTCTCTCT 60.691 66.667 0.00 0.00 44.06 3.10
170 178 2.741055 GGCCAAGCCCCTCTCTCTC 61.741 68.421 0.00 0.00 44.06 3.20
171 179 1.688884 GCCAAGCCCCTCTCTCTCT 60.689 63.158 0.00 0.00 0.00 3.10
186 194 2.892215 TCTCTCTCTCTATCGGCGTCTA 59.108 50.000 6.85 0.00 0.00 2.59
197 205 4.452733 GCGTCTAACTGGGCCGCT 62.453 66.667 0.00 0.00 41.06 5.52
262 282 4.517934 CCCATGCTCCCAGCCCAG 62.518 72.222 0.00 0.00 41.51 4.45
395 416 2.202623 GCAATCTCCGTCGAGCGT 60.203 61.111 0.00 0.00 39.32 5.07
406 427 3.382832 CGAGCGTGGAAGGGAGGT 61.383 66.667 0.00 0.00 0.00 3.85
408 429 2.526873 AGCGTGGAAGGGAGGTGT 60.527 61.111 0.00 0.00 0.00 4.16
494 515 0.969894 CGGCTAGGGTAAGATGAGGG 59.030 60.000 0.00 0.00 0.00 4.30
544 565 7.765360 AGTTGTAGTACTACTCTACTAGTGCTG 59.235 40.741 28.56 0.00 39.30 4.41
549 570 3.697045 ACTACTCTACTAGTGCTGCTTGG 59.303 47.826 5.39 0.00 39.39 3.61
552 573 4.087182 ACTCTACTAGTGCTGCTTGGTTA 58.913 43.478 5.39 0.00 36.93 2.85
555 576 3.045601 ACTAGTGCTGCTTGGTTACTG 57.954 47.619 0.00 0.00 0.00 2.74
558 579 1.603455 TGCTGCTTGGTTACTGCCC 60.603 57.895 0.00 0.00 0.00 5.36
566 587 2.917713 TGGTTACTGCCCAATTCCAT 57.082 45.000 0.00 0.00 0.00 3.41
572 593 5.186992 GGTTACTGCCCAATTCCATTACTTT 59.813 40.000 0.00 0.00 0.00 2.66
574 595 5.823861 ACTGCCCAATTCCATTACTTTTT 57.176 34.783 0.00 0.00 0.00 1.94
598 619 4.926860 TTGTGTGATTATCTGTTGCTCG 57.073 40.909 0.00 0.00 0.00 5.03
613 634 4.161333 GTTGCTCGATGGTTGATTTGAAG 58.839 43.478 0.00 0.00 0.00 3.02
618 639 5.392380 GCTCGATGGTTGATTTGAAGTTGAT 60.392 40.000 0.00 0.00 0.00 2.57
666 745 7.679881 AGAAAGGGGAGGTTTTCATTTTATCAT 59.320 33.333 0.56 0.00 36.11 2.45
696 775 5.072741 GGTAGCAATGATGTGATATGGGTT 58.927 41.667 0.00 0.00 0.00 4.11
717 796 6.654582 GGGTTATTTGGTTGAATGAATTTGCT 59.345 34.615 0.00 0.00 0.00 3.91
718 797 7.821846 GGGTTATTTGGTTGAATGAATTTGCTA 59.178 33.333 0.00 0.00 0.00 3.49
720 799 9.423061 GTTATTTGGTTGAATGAATTTGCTAGT 57.577 29.630 0.00 0.00 0.00 2.57
721 800 9.995003 TTATTTGGTTGAATGAATTTGCTAGTT 57.005 25.926 0.00 0.00 0.00 2.24
722 801 7.945033 TTTGGTTGAATGAATTTGCTAGTTC 57.055 32.000 0.00 0.00 0.00 3.01
724 803 7.288810 TGGTTGAATGAATTTGCTAGTTCTT 57.711 32.000 5.15 0.00 0.00 2.52
725 804 7.147312 TGGTTGAATGAATTTGCTAGTTCTTG 58.853 34.615 5.15 0.00 0.00 3.02
727 806 8.296713 GGTTGAATGAATTTGCTAGTTCTTGTA 58.703 33.333 5.15 0.00 0.00 2.41
728 807 9.677567 GTTGAATGAATTTGCTAGTTCTTGTAA 57.322 29.630 5.15 0.00 0.00 2.41
729 808 9.677567 TTGAATGAATTTGCTAGTTCTTGTAAC 57.322 29.630 5.15 0.00 0.00 2.50
730 809 8.015087 TGAATGAATTTGCTAGTTCTTGTAACG 58.985 33.333 5.15 0.00 0.00 3.18
732 811 4.680171 ATTTGCTAGTTCTTGTAACGCC 57.320 40.909 0.00 0.00 0.00 5.68
735 814 2.224329 TGCTAGTTCTTGTAACGCCCAA 60.224 45.455 0.00 0.00 0.00 4.12
736 815 2.159037 GCTAGTTCTTGTAACGCCCAAC 59.841 50.000 0.00 0.00 0.00 3.77
738 817 1.944709 AGTTCTTGTAACGCCCAACAC 59.055 47.619 0.00 0.00 0.00 3.32
739 818 0.938713 TTCTTGTAACGCCCAACACG 59.061 50.000 0.00 0.00 0.00 4.49
740 819 0.881159 TCTTGTAACGCCCAACACGG 60.881 55.000 0.00 0.00 34.00 4.94
741 820 0.881159 CTTGTAACGCCCAACACGGA 60.881 55.000 0.00 0.00 36.56 4.69
742 821 0.881159 TTGTAACGCCCAACACGGAG 60.881 55.000 0.00 0.00 36.56 4.63
793 881 1.593750 GCCTGATAGCCTCACAGCG 60.594 63.158 0.00 0.00 38.01 5.18
798 886 1.406898 TGATAGCCTCACAGCGAGAAG 59.593 52.381 0.00 0.00 45.45 2.85
804 892 2.333014 CCTCACAGCGAGAAGTTTCTC 58.667 52.381 11.06 11.06 45.45 2.87
823 914 7.179338 AGTTTCTCATTGCTAGTCTTCTCCTTA 59.821 37.037 0.00 0.00 0.00 2.69
832 923 5.639931 GCTAGTCTTCTCCTTACAACAAAGG 59.360 44.000 0.00 0.00 46.35 3.11
886 979 1.455849 CACCTGTGGCCTCCTTTGA 59.544 57.895 3.32 0.00 0.00 2.69
888 981 0.555769 ACCTGTGGCCTCCTTTGAAA 59.444 50.000 3.32 0.00 0.00 2.69
929 1023 4.010349 CTGGTAGGGTTGAAATGAAGGAC 58.990 47.826 0.00 0.00 0.00 3.85
1110 1204 2.661866 AACGTCTGCACACTCCGC 60.662 61.111 0.00 0.00 0.00 5.54
1185 1279 1.302351 GTTCAGAGCTGCACTGCCT 60.302 57.895 20.21 0.00 35.61 4.75
1194 1288 1.881903 CTGCACTGCCTTCTCCTCGA 61.882 60.000 0.00 0.00 0.00 4.04
1197 1291 0.389166 CACTGCCTTCTCCTCGACAC 60.389 60.000 0.00 0.00 0.00 3.67
1199 1293 1.271982 ACTGCCTTCTCCTCGACACTA 60.272 52.381 0.00 0.00 0.00 2.74
1209 1304 5.250982 TCTCCTCGACACTAACTGTATTCA 58.749 41.667 0.00 0.00 31.03 2.57
1210 1305 5.708697 TCTCCTCGACACTAACTGTATTCAA 59.291 40.000 0.00 0.00 31.03 2.69
1221 1316 6.715264 ACTAACTGTATTCAAAGGGGTTTGAG 59.285 38.462 1.20 0.00 41.38 3.02
1224 1319 3.141272 TGTATTCAAAGGGGTTTGAGGGT 59.859 43.478 1.20 0.00 41.38 4.34
1226 1321 2.080654 TCAAAGGGGTTTGAGGGTTG 57.919 50.000 0.00 0.00 36.15 3.77
1227 1322 1.289530 TCAAAGGGGTTTGAGGGTTGT 59.710 47.619 0.00 0.00 36.15 3.32
1238 1333 0.400213 GAGGGTTGTGGTGGATGTGA 59.600 55.000 0.00 0.00 0.00 3.58
1247 1342 0.976641 GGTGGATGTGACTGTGGAGA 59.023 55.000 0.00 0.00 0.00 3.71
1265 1360 6.115446 GTGGAGATGTTTGATGGAATGTAGA 58.885 40.000 0.00 0.00 0.00 2.59
1289 1384 4.295407 CCGAGGGGATCCTTGCTA 57.705 61.111 12.58 0.00 45.05 3.49
1290 1385 2.765352 CCGAGGGGATCCTTGCTAT 58.235 57.895 12.58 0.00 45.05 2.97
1291 1386 0.322975 CCGAGGGGATCCTTGCTATG 59.677 60.000 12.58 0.00 45.05 2.23
1292 1387 0.322975 CGAGGGGATCCTTGCTATGG 59.677 60.000 12.58 0.00 45.05 2.74
1293 1388 0.695347 GAGGGGATCCTTGCTATGGG 59.305 60.000 12.58 0.00 45.05 4.00
1294 1389 1.075659 GGGGATCCTTGCTATGGGC 59.924 63.158 12.58 0.00 42.22 5.36
1304 1399 1.066471 TGCTATGGGCTATGGCATGA 58.934 50.000 17.57 0.00 46.71 3.07
1334 1429 3.494251 GTGTTTGTTCAATTCCATGTGCC 59.506 43.478 0.00 0.00 0.00 5.01
1338 1433 2.964464 TGTTCAATTCCATGTGCCAAGT 59.036 40.909 0.00 0.00 0.00 3.16
1352 1447 6.236017 TGTGCCAAGTATTTCTTTTAGTCG 57.764 37.500 0.00 0.00 33.63 4.18
1356 1451 6.147164 TGCCAAGTATTTCTTTTAGTCGTCTG 59.853 38.462 0.00 0.00 33.63 3.51
1360 1455 5.869888 AGTATTTCTTTTAGTCGTCTGCTGG 59.130 40.000 0.00 0.00 0.00 4.85
1361 1456 4.330944 TTTCTTTTAGTCGTCTGCTGGA 57.669 40.909 0.00 0.00 0.00 3.86
1362 1457 4.330944 TTCTTTTAGTCGTCTGCTGGAA 57.669 40.909 0.00 0.00 0.00 3.53
1363 1458 4.330944 TCTTTTAGTCGTCTGCTGGAAA 57.669 40.909 0.00 0.00 0.00 3.13
1364 1459 4.894784 TCTTTTAGTCGTCTGCTGGAAAT 58.105 39.130 0.00 0.00 0.00 2.17
1365 1460 5.305585 TCTTTTAGTCGTCTGCTGGAAATT 58.694 37.500 0.00 0.00 0.00 1.82
1366 1461 5.408604 TCTTTTAGTCGTCTGCTGGAAATTC 59.591 40.000 0.00 0.00 0.00 2.17
1367 1462 4.537135 TTAGTCGTCTGCTGGAAATTCT 57.463 40.909 0.00 0.00 0.00 2.40
1368 1463 5.654603 TTAGTCGTCTGCTGGAAATTCTA 57.345 39.130 0.00 0.00 0.00 2.10
1369 1464 4.744795 AGTCGTCTGCTGGAAATTCTAT 57.255 40.909 0.00 0.00 0.00 1.98
1370 1465 5.854010 AGTCGTCTGCTGGAAATTCTATA 57.146 39.130 0.00 0.00 0.00 1.31
1371 1466 5.837437 AGTCGTCTGCTGGAAATTCTATAG 58.163 41.667 0.00 0.00 0.00 1.31
1372 1467 5.594725 AGTCGTCTGCTGGAAATTCTATAGA 59.405 40.000 0.00 0.00 0.00 1.98
1373 1468 5.918011 GTCGTCTGCTGGAAATTCTATAGAG 59.082 44.000 2.02 0.00 0.00 2.43
1374 1469 5.010112 TCGTCTGCTGGAAATTCTATAGAGG 59.990 44.000 2.02 1.00 0.00 3.69
1375 1470 5.546526 GTCTGCTGGAAATTCTATAGAGGG 58.453 45.833 2.02 0.00 0.00 4.30
1376 1471 4.040952 TCTGCTGGAAATTCTATAGAGGGC 59.959 45.833 2.02 2.54 0.00 5.19
1377 1472 3.716353 TGCTGGAAATTCTATAGAGGGCA 59.284 43.478 2.02 4.81 0.00 5.36
1378 1473 4.202398 TGCTGGAAATTCTATAGAGGGCAG 60.202 45.833 2.02 0.00 0.00 4.85
1379 1474 4.805609 GCTGGAAATTCTATAGAGGGCAGG 60.806 50.000 2.02 0.00 0.00 4.85
1380 1475 3.073062 TGGAAATTCTATAGAGGGCAGGC 59.927 47.826 2.02 0.00 0.00 4.85
1381 1476 3.560239 GGAAATTCTATAGAGGGCAGGCC 60.560 52.174 4.33 4.33 0.00 5.19
1382 1477 2.731339 ATTCTATAGAGGGCAGGCCT 57.269 50.000 17.36 17.36 36.10 5.19
1383 1478 1.722034 TTCTATAGAGGGCAGGCCTG 58.278 55.000 29.34 29.34 36.10 4.85
1384 1479 0.178921 TCTATAGAGGGCAGGCCTGG 60.179 60.000 33.46 15.81 36.10 4.45
1397 1492 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
1398 1493 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
1399 1494 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
1400 1495 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
1401 1496 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
1402 1497 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
1403 1498 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
1404 1499 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
1405 1500 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
1406 1501 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
1407 1502 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
1408 1503 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
1409 1504 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
1410 1505 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
1411 1506 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
1412 1507 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
1413 1508 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
1414 1509 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
1415 1510 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
1416 1511 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
1417 1512 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
1418 1513 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
1419 1514 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
1420 1515 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
1421 1516 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
1422 1517 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
1423 1518 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
1424 1519 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
1425 1520 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
1426 1521 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
1427 1522 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
1428 1523 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
1429 1524 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
1430 1525 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
1431 1526 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
1432 1527 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
1433 1528 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
1434 1529 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
1445 1540 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
1446 1541 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
1447 1542 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
1448 1543 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
1449 1544 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
1450 1545 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
1451 1546 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
1452 1547 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
1453 1548 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
1454 1549 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
1455 1550 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
1456 1551 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
1457 1552 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
1458 1553 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
1468 1563 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
1469 1564 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
1470 1565 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
1471 1566 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
1472 1567 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
1473 1568 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
1474 1569 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
1475 1570 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
1476 1571 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
1477 1572 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
1478 1573 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
1479 1574 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
1480 1575 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
1481 1576 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
1482 1577 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
1483 1578 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
1484 1579 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
1485 1580 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
1486 1581 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
1487 1582 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
1488 1583 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
1489 1584 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
1490 1585 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
1491 1586 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
1492 1587 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
1493 1588 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
1494 1589 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
1495 1590 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
1496 1591 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
1497 1592 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
1498 1593 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
1499 1594 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
1500 1595 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
1502 1597 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
1503 1598 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
1504 1599 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
1505 1600 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
1506 1601 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
1507 1602 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
1508 1603 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
1515 1610 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
1516 1611 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
1517 1612 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
1518 1613 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
1519 1614 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
1520 1615 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
1521 1616 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
1522 1617 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
1523 1618 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
1524 1619 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
1525 1620 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
1526 1621 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
1527 1622 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
1528 1623 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
1529 1624 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
1530 1625 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
1531 1626 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
1532 1627 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
1533 1628 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
1534 1629 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
1535 1630 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
1536 1631 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
1537 1632 0.773644 ATGCACTGGGTCTGTCCTTT 59.226 50.000 0.00 0.00 36.25 3.11
1538 1633 0.179020 TGCACTGGGTCTGTCCTTTG 60.179 55.000 0.00 0.00 36.25 2.77
1539 1634 0.179018 GCACTGGGTCTGTCCTTTGT 60.179 55.000 0.00 0.00 36.25 2.83
1545 1640 1.517242 GGTCTGTCCTTTGTCTGCTG 58.483 55.000 0.00 0.00 0.00 4.41
1546 1641 1.517242 GTCTGTCCTTTGTCTGCTGG 58.483 55.000 0.00 0.00 0.00 4.85
1550 1645 3.152341 CTGTCCTTTGTCTGCTGGAAAT 58.848 45.455 0.00 0.00 0.00 2.17
1552 1647 3.569701 TGTCCTTTGTCTGCTGGAAATTC 59.430 43.478 0.00 0.00 0.00 2.17
1559 1654 2.289002 GTCTGCTGGAAATTCTATGGCG 59.711 50.000 0.00 0.00 0.00 5.69
1568 1663 4.583073 GGAAATTCTATGGCGTATTGGGTT 59.417 41.667 0.00 0.00 0.00 4.11
1595 1690 4.766891 CCAAAAAGATGAAACCTAGGCAGA 59.233 41.667 9.30 0.00 0.00 4.26
1633 1729 3.383825 GCCTGAAATTTGAGCTCCATGAT 59.616 43.478 12.15 0.00 0.00 2.45
1640 1736 5.831702 ATTTGAGCTCCATGATCAGAAAC 57.168 39.130 12.15 0.00 42.43 2.78
1646 1742 5.184711 AGCTCCATGATCAGAAACTCTTTC 58.815 41.667 0.09 0.00 39.96 2.62
1650 1746 5.726308 TCCATGATCAGAAACTCTTTCCCTA 59.274 40.000 0.09 0.00 40.54 3.53
1667 1763 3.140707 TCCCTATGGATACGAACTGGGTA 59.859 47.826 0.00 0.00 35.03 3.69
1679 1775 3.058016 CGAACTGGGTACTAAAGTCACGA 60.058 47.826 0.00 0.00 0.00 4.35
1714 1817 4.344102 GGTTGCTTAAGTTTTTCCCCTCTT 59.656 41.667 4.02 0.00 0.00 2.85
1715 1818 5.509163 GGTTGCTTAAGTTTTTCCCCTCTTC 60.509 44.000 4.02 0.00 0.00 2.87
1732 1835 8.004801 TCCCCTCTTCTTTCAGTTTCTTTATTT 58.995 33.333 0.00 0.00 0.00 1.40
1741 1844 6.254281 TCAGTTTCTTTATTTGCTACAGGC 57.746 37.500 0.00 0.00 42.22 4.85
1750 1853 1.908344 TTGCTACAGGCTGCAAATGA 58.092 45.000 15.89 0.00 44.75 2.57
1751 1854 2.133281 TGCTACAGGCTGCAAATGAT 57.867 45.000 15.89 0.00 42.39 2.45
1767 1870 6.036626 TGCAAATGATCATCACAAATTCATGC 59.963 34.615 9.06 7.58 0.00 4.06
1791 1894 1.267121 TGAGTGGGTCTGTAGAAGGC 58.733 55.000 0.00 0.00 0.00 4.35
1995 2694 4.332543 CGTATCCTGTTTCTTGCTGCATTA 59.667 41.667 1.84 0.00 0.00 1.90
1997 2696 6.202762 CGTATCCTGTTTCTTGCTGCATTATA 59.797 38.462 1.84 0.00 0.00 0.98
2024 2723 6.071320 AGTACTCTTTGCAAAGGAAAAGGAT 58.929 36.000 33.01 14.20 39.72 3.24
2091 2790 4.039245 GCTCTAGGGAATATGCACTGTACA 59.961 45.833 0.00 0.00 0.00 2.90
2226 3019 5.856156 TCTCGGGTTATTGTGTTACTTTGA 58.144 37.500 0.00 0.00 0.00 2.69
2274 3075 9.529325 CTATGAAAATGCATGACTGAATTCATT 57.471 29.630 8.96 2.75 37.43 2.57
2278 3079 8.842358 AAAATGCATGACTGAATTCATTTCTT 57.158 26.923 8.96 4.44 33.74 2.52
2279 3080 7.827819 AATGCATGACTGAATTCATTTCTTG 57.172 32.000 8.96 15.85 33.74 3.02
2296 3097 4.722526 TCTTGTCCTTGGAGATTTGGAA 57.277 40.909 0.00 0.00 0.00 3.53
2302 3103 6.310941 TGTCCTTGGAGATTTGGAATTTGTA 58.689 36.000 0.00 0.00 0.00 2.41
2307 3108 8.971073 CCTTGGAGATTTGGAATTTGTATAGTT 58.029 33.333 0.00 0.00 0.00 2.24
2384 3185 4.634199 AGGAGTTTGCCATGTTCAAAATG 58.366 39.130 13.04 0.00 35.49 2.32
2402 3203 7.806690 TCAAAATGTGAAGCTGTACAATCTAC 58.193 34.615 7.31 0.00 31.51 2.59
2421 3222 8.892723 CAATCTACAAGTTATGCATCTTAACCA 58.107 33.333 0.19 0.00 31.31 3.67
2422 3223 8.668510 ATCTACAAGTTATGCATCTTAACCAG 57.331 34.615 0.19 0.69 31.31 4.00
2428 3229 8.915654 CAAGTTATGCATCTTAACCAGTTTTTC 58.084 33.333 0.19 0.00 31.31 2.29
2435 3236 6.381801 CATCTTAACCAGTTTTTCTTGCGAT 58.618 36.000 0.00 0.00 0.00 4.58
2436 3237 5.757886 TCTTAACCAGTTTTTCTTGCGATG 58.242 37.500 0.00 0.00 0.00 3.84
2438 3239 3.626028 ACCAGTTTTTCTTGCGATGTC 57.374 42.857 0.00 0.00 0.00 3.06
2441 3242 3.916172 CCAGTTTTTCTTGCGATGTCATG 59.084 43.478 0.00 0.00 0.00 3.07
2443 3244 4.614284 CAGTTTTTCTTGCGATGTCATGAC 59.386 41.667 19.27 19.27 0.00 3.06
2457 3258 3.770388 TGTCATGACATCCCATTTGCAAT 59.230 39.130 24.56 0.00 36.21 3.56
2465 3266 4.937015 ACATCCCATTTGCAATTAACAAGC 59.063 37.500 0.00 0.00 0.00 4.01
2466 3267 4.613925 TCCCATTTGCAATTAACAAGCA 57.386 36.364 0.00 0.00 36.32 3.91
2467 3268 4.314121 TCCCATTTGCAATTAACAAGCAC 58.686 39.130 0.00 0.00 38.11 4.40
2468 3269 4.063689 CCCATTTGCAATTAACAAGCACA 58.936 39.130 0.00 0.00 38.11 4.57
2469 3270 4.514441 CCCATTTGCAATTAACAAGCACAA 59.486 37.500 0.00 0.00 38.11 3.33
2470 3271 5.008415 CCCATTTGCAATTAACAAGCACAAA 59.992 36.000 0.00 0.00 38.11 2.83
2471 3272 6.294065 CCCATTTGCAATTAACAAGCACAAAT 60.294 34.615 0.00 0.00 38.11 2.32
2472 3273 7.094890 CCCATTTGCAATTAACAAGCACAAATA 60.095 33.333 0.00 0.00 38.11 1.40
2473 3274 8.452534 CCATTTGCAATTAACAAGCACAAATAT 58.547 29.630 0.00 0.00 38.11 1.28
2474 3275 9.268255 CATTTGCAATTAACAAGCACAAATATG 57.732 29.630 0.00 0.00 38.11 1.78
2475 3276 6.964741 TGCAATTAACAAGCACAAATATGG 57.035 33.333 0.00 0.00 32.55 2.74
2481 3282 7.987750 TTAACAAGCACAAATATGGTGACTA 57.012 32.000 10.98 0.00 38.54 2.59
2489 3290 7.014230 AGCACAAATATGGTGACTACTTTTGTT 59.986 33.333 10.98 0.00 38.54 2.83
2552 3353 2.697751 AGCCTATTCTTCGATGCTGTCT 59.302 45.455 0.00 0.00 0.00 3.41
2630 3431 0.762418 TGGACGGGCCGATCAAATAT 59.238 50.000 35.78 7.12 40.66 1.28
2642 3443 5.737860 CCGATCAAATATGAGATCCATGGA 58.262 41.667 18.88 18.88 39.39 3.41
2649 3450 9.919416 TCAAATATGAGATCCATGGAAAAGTAA 57.081 29.630 20.67 4.02 36.71 2.24
2660 3461 6.619437 TCCATGGAAAAGTAAGATATCCCTCA 59.381 38.462 13.46 0.00 0.00 3.86
2710 3511 9.117183 TCATTCATGGTTTCTTCTTAGATCATG 57.883 33.333 0.00 0.00 36.31 3.07
2773 3578 1.287815 CGTGCTGGGTCTGTACGAA 59.712 57.895 9.01 0.00 41.78 3.85
2885 3691 6.714810 TGTGGCAAAGTAGATAGATGTTTTGT 59.285 34.615 0.00 0.00 0.00 2.83
2888 3694 7.094805 TGGCAAAGTAGATAGATGTTTTGTCAC 60.095 37.037 0.00 0.00 35.84 3.67
2891 3697 6.282199 AGTAGATAGATGTTTTGTCACCGT 57.718 37.500 0.00 0.00 0.00 4.83
2892 3698 6.100004 AGTAGATAGATGTTTTGTCACCGTG 58.900 40.000 0.00 0.00 0.00 4.94
2897 3703 4.133820 AGATGTTTTGTCACCGTGAATGA 58.866 39.130 1.88 0.00 0.00 2.57
2926 3734 2.266279 CAACTTCTGGGAGGTTAGGGA 58.734 52.381 0.00 0.00 30.85 4.20
2931 3739 2.478292 TCTGGGAGGTTAGGGATGTTC 58.522 52.381 0.00 0.00 0.00 3.18
2935 3743 1.134068 GGAGGTTAGGGATGTTCAGGC 60.134 57.143 0.00 0.00 0.00 4.85
2947 3755 1.713647 TGTTCAGGCATTTTAGGGGGA 59.286 47.619 0.00 0.00 0.00 4.81
2992 3800 1.302752 TCATGCTGCCACTGGTGTC 60.303 57.895 0.00 0.00 0.00 3.67
3024 3852 2.034066 GCAGCAGCTTGGGGTACA 59.966 61.111 0.00 0.00 37.91 2.90
3053 3881 2.699954 CCAACCAGTTCATTCGTAGCT 58.300 47.619 0.00 0.00 0.00 3.32
3057 3885 4.737855 ACCAGTTCATTCGTAGCTGTAT 57.262 40.909 0.00 0.00 0.00 2.29
3058 3886 4.683832 ACCAGTTCATTCGTAGCTGTATC 58.316 43.478 0.00 0.00 0.00 2.24
3059 3887 4.402793 ACCAGTTCATTCGTAGCTGTATCT 59.597 41.667 0.00 0.00 0.00 1.98
3062 3890 5.233050 CAGTTCATTCGTAGCTGTATCTTGG 59.767 44.000 0.00 0.00 0.00 3.61
3063 3891 3.717707 TCATTCGTAGCTGTATCTTGGC 58.282 45.455 0.00 0.00 0.00 4.52
3066 3894 0.384309 CGTAGCTGTATCTTGGCCGA 59.616 55.000 0.00 0.00 0.00 5.54
3068 3896 2.545952 CGTAGCTGTATCTTGGCCGATT 60.546 50.000 0.00 0.00 0.00 3.34
3099 3943 1.295020 TGGCCTGGGCTATTACAAGT 58.705 50.000 21.72 0.00 41.60 3.16
3190 4035 4.583073 GGGTAAACATGTGTTGAGAAAGGT 59.417 41.667 0.00 0.00 38.44 3.50
3213 4059 1.566703 TGTCTGACCCTGTTTTCCCAA 59.433 47.619 5.17 0.00 0.00 4.12
3259 4109 9.974980 TTAATTTTGGAGAATTACAAAGTCCAC 57.025 29.630 0.00 0.00 37.03 4.02
3269 4120 2.830285 AAAGTCCACGCGGTGTTGC 61.830 57.895 12.47 0.00 0.00 4.17
3280 4131 1.522258 GCGGTGTTGCTGTCAAATTTG 59.478 47.619 12.15 12.15 33.37 2.32
3285 4136 3.556775 GTGTTGCTGTCAAATTTGTGCAT 59.443 39.130 24.52 0.00 33.37 3.96
3286 4137 4.744137 GTGTTGCTGTCAAATTTGTGCATA 59.256 37.500 24.52 17.97 33.37 3.14
3287 4138 5.233902 GTGTTGCTGTCAAATTTGTGCATAA 59.766 36.000 24.52 17.43 33.37 1.90
3328 4372 4.742438 TTTACACATCGCTTGGAAGAAC 57.258 40.909 0.00 0.00 0.00 3.01
3425 4478 4.647964 CGTGGTTACCGAGAAATTCAATG 58.352 43.478 0.00 0.00 0.00 2.82
3478 4531 9.646427 TTTTGAGGGGTATTTGAAATTAATTCG 57.354 29.630 0.10 0.00 41.18 3.34
3480 4533 7.992008 TGAGGGGTATTTGAAATTAATTCGAC 58.008 34.615 0.10 0.00 41.18 4.20
3537 4590 1.869767 GCTTCGGGATTACTGCATCAG 59.130 52.381 0.00 0.00 37.52 2.90
3542 4595 1.141657 GGGATTACTGCATCAGCCTGA 59.858 52.381 0.00 0.00 41.13 3.86
3554 4607 3.569194 TCAGCCTGACAAAAGGTTACA 57.431 42.857 0.00 0.00 39.75 2.41
3565 4621 5.313712 ACAAAAGGTTACACTATGACCAGG 58.686 41.667 0.00 0.00 39.53 4.45
3569 4625 2.420129 GGTTACACTATGACCAGGCAGG 60.420 54.545 0.00 0.00 45.67 4.85
3600 4656 2.204090 GGGGGAGGAAGGTGGTGA 60.204 66.667 0.00 0.00 0.00 4.02
3615 4671 1.599576 GTGAGAGGAGGGAGCCAAC 59.400 63.158 0.00 0.00 0.00 3.77
3649 4705 1.926511 GCACAAGAAGGCCGTCATGG 61.927 60.000 24.36 15.48 42.50 3.66
3650 4706 1.002134 ACAAGAAGGCCGTCATGGG 60.002 57.895 24.36 11.81 38.63 4.00
3657 4713 3.361977 GCCGTCATGGGCGTGTTT 61.362 61.111 9.12 0.00 44.40 2.83
3658 4714 2.560861 CCGTCATGGGCGTGTTTG 59.439 61.111 9.12 0.00 0.00 2.93
3659 4715 2.560861 CGTCATGGGCGTGTTTGG 59.439 61.111 0.00 0.00 0.00 3.28
3660 4716 2.258013 CGTCATGGGCGTGTTTGGT 61.258 57.895 0.00 0.00 0.00 3.67
3661 4717 1.791103 CGTCATGGGCGTGTTTGGTT 61.791 55.000 0.00 0.00 0.00 3.67
3662 4718 0.318614 GTCATGGGCGTGTTTGGTTG 60.319 55.000 0.00 0.00 0.00 3.77
3663 4719 0.466372 TCATGGGCGTGTTTGGTTGA 60.466 50.000 0.00 0.00 0.00 3.18
3664 4720 0.602562 CATGGGCGTGTTTGGTTGAT 59.397 50.000 0.00 0.00 0.00 2.57
3665 4721 1.000731 CATGGGCGTGTTTGGTTGATT 59.999 47.619 0.00 0.00 0.00 2.57
3666 4722 0.387202 TGGGCGTGTTTGGTTGATTG 59.613 50.000 0.00 0.00 0.00 2.67
3667 4723 0.319469 GGGCGTGTTTGGTTGATTGG 60.319 55.000 0.00 0.00 0.00 3.16
3668 4724 0.943835 GGCGTGTTTGGTTGATTGGC 60.944 55.000 0.00 0.00 0.00 4.52
3669 4725 0.943835 GCGTGTTTGGTTGATTGGCC 60.944 55.000 0.00 0.00 0.00 5.36
3670 4726 0.319469 CGTGTTTGGTTGATTGGCCC 60.319 55.000 0.00 0.00 0.00 5.80
3671 4727 0.319469 GTGTTTGGTTGATTGGCCCG 60.319 55.000 0.00 0.00 0.00 6.13
3672 4728 1.374125 GTTTGGTTGATTGGCCCGC 60.374 57.895 0.00 0.00 0.00 6.13
3673 4729 1.834378 TTTGGTTGATTGGCCCGCA 60.834 52.632 0.00 0.00 0.00 5.69
3674 4730 2.093537 TTTGGTTGATTGGCCCGCAC 62.094 55.000 0.00 0.00 0.00 5.34
3675 4731 3.758931 GGTTGATTGGCCCGCACC 61.759 66.667 0.00 0.00 0.00 5.01
3676 4732 2.676471 GTTGATTGGCCCGCACCT 60.676 61.111 0.00 0.00 0.00 4.00
3677 4733 2.676121 TTGATTGGCCCGCACCTG 60.676 61.111 0.00 0.00 0.00 4.00
3678 4734 4.738998 TGATTGGCCCGCACCTGG 62.739 66.667 0.00 0.00 0.00 4.45
3692 4748 4.889112 CTGGCTGGCATCCCGCAT 62.889 66.667 3.74 0.00 45.17 4.73
3701 4757 3.334078 CATCCCGCATGCAAAAGTC 57.666 52.632 19.57 0.00 0.00 3.01
3702 4758 0.527113 CATCCCGCATGCAAAAGTCA 59.473 50.000 19.57 0.00 0.00 3.41
3703 4759 0.813184 ATCCCGCATGCAAAAGTCAG 59.187 50.000 19.57 0.00 0.00 3.51
3704 4760 0.250684 TCCCGCATGCAAAAGTCAGA 60.251 50.000 19.57 0.00 0.00 3.27
3705 4761 0.169672 CCCGCATGCAAAAGTCAGAG 59.830 55.000 19.57 0.00 0.00 3.35
3706 4762 0.877071 CCGCATGCAAAAGTCAGAGT 59.123 50.000 19.57 0.00 0.00 3.24
3707 4763 1.400629 CCGCATGCAAAAGTCAGAGTG 60.401 52.381 19.57 0.00 0.00 3.51
3708 4764 1.265095 CGCATGCAAAAGTCAGAGTGT 59.735 47.619 19.57 0.00 0.00 3.55
3709 4765 2.287188 CGCATGCAAAAGTCAGAGTGTT 60.287 45.455 19.57 0.00 0.00 3.32
3710 4766 3.709987 GCATGCAAAAGTCAGAGTGTTT 58.290 40.909 14.21 0.00 0.00 2.83
3711 4767 3.488310 GCATGCAAAAGTCAGAGTGTTTG 59.512 43.478 14.21 7.83 34.74 2.93
3712 4768 3.781079 TGCAAAAGTCAGAGTGTTTGG 57.219 42.857 11.63 0.00 32.73 3.28
3713 4769 3.088532 TGCAAAAGTCAGAGTGTTTGGT 58.911 40.909 11.63 0.00 32.73 3.67
3714 4770 3.509575 TGCAAAAGTCAGAGTGTTTGGTT 59.490 39.130 11.63 0.00 32.73 3.67
3715 4771 4.021544 TGCAAAAGTCAGAGTGTTTGGTTT 60.022 37.500 11.63 0.00 32.73 3.27
3716 4772 4.562789 GCAAAAGTCAGAGTGTTTGGTTTC 59.437 41.667 11.63 0.00 32.73 2.78
3717 4773 4.983671 AAAGTCAGAGTGTTTGGTTTCC 57.016 40.909 0.00 0.00 0.00 3.13
3718 4774 3.933861 AGTCAGAGTGTTTGGTTTCCT 57.066 42.857 0.00 0.00 0.00 3.36
3719 4775 3.545703 AGTCAGAGTGTTTGGTTTCCTG 58.454 45.455 0.00 0.00 0.00 3.86
3720 4776 3.054361 AGTCAGAGTGTTTGGTTTCCTGT 60.054 43.478 0.00 0.00 0.00 4.00
3721 4777 3.065371 GTCAGAGTGTTTGGTTTCCTGTG 59.935 47.826 0.00 0.00 0.00 3.66
3722 4778 3.016736 CAGAGTGTTTGGTTTCCTGTGT 58.983 45.455 0.00 0.00 0.00 3.72
3723 4779 3.016736 AGAGTGTTTGGTTTCCTGTGTG 58.983 45.455 0.00 0.00 0.00 3.82
3724 4780 3.013921 GAGTGTTTGGTTTCCTGTGTGA 58.986 45.455 0.00 0.00 0.00 3.58
3725 4781 2.752903 AGTGTTTGGTTTCCTGTGTGAC 59.247 45.455 0.00 0.00 0.00 3.67
3726 4782 2.096248 TGTTTGGTTTCCTGTGTGACC 58.904 47.619 0.00 0.00 0.00 4.02
3727 4783 1.407618 GTTTGGTTTCCTGTGTGACCC 59.592 52.381 0.00 0.00 0.00 4.46
3728 4784 0.106419 TTGGTTTCCTGTGTGACCCC 60.106 55.000 0.00 0.00 0.00 4.95
3729 4785 0.991355 TGGTTTCCTGTGTGACCCCT 60.991 55.000 0.00 0.00 0.00 4.79
3730 4786 0.185175 GGTTTCCTGTGTGACCCCTT 59.815 55.000 0.00 0.00 0.00 3.95
3731 4787 1.605753 GTTTCCTGTGTGACCCCTTC 58.394 55.000 0.00 0.00 0.00 3.46
3732 4788 0.107831 TTTCCTGTGTGACCCCTTCG 59.892 55.000 0.00 0.00 0.00 3.79
3733 4789 1.764571 TTCCTGTGTGACCCCTTCGG 61.765 60.000 0.00 0.00 37.81 4.30
3734 4790 2.358737 CTGTGTGACCCCTTCGGC 60.359 66.667 0.00 0.00 33.26 5.54
3735 4791 3.901797 CTGTGTGACCCCTTCGGCC 62.902 68.421 0.00 0.00 33.26 6.13
3736 4792 3.637273 GTGTGACCCCTTCGGCCT 61.637 66.667 0.00 0.00 33.26 5.19
3737 4793 3.636231 TGTGACCCCTTCGGCCTG 61.636 66.667 0.00 0.00 33.26 4.85
3738 4794 4.410400 GTGACCCCTTCGGCCTGG 62.410 72.222 0.00 0.00 33.26 4.45
3749 4805 2.348998 GGCCTGGCCCGATAGATG 59.651 66.667 27.77 0.00 44.06 2.90
3750 4806 2.359230 GCCTGGCCCGATAGATGC 60.359 66.667 7.66 0.00 39.76 3.91
3751 4807 3.150949 CCTGGCCCGATAGATGCA 58.849 61.111 0.00 0.00 35.71 3.96
3752 4808 1.451504 CCTGGCCCGATAGATGCAA 59.548 57.895 0.00 0.00 35.71 4.08
3753 4809 0.179020 CCTGGCCCGATAGATGCAAA 60.179 55.000 0.00 0.00 35.71 3.68
3754 4810 1.679139 CTGGCCCGATAGATGCAAAA 58.321 50.000 0.00 0.00 35.71 2.44
3755 4811 1.334869 CTGGCCCGATAGATGCAAAAC 59.665 52.381 0.00 0.00 35.71 2.43
3756 4812 1.340502 TGGCCCGATAGATGCAAAACA 60.341 47.619 0.00 0.00 35.71 2.83
3757 4813 1.748493 GGCCCGATAGATGCAAAACAA 59.252 47.619 0.00 0.00 35.71 2.83
3758 4814 2.223572 GGCCCGATAGATGCAAAACAAG 60.224 50.000 0.00 0.00 35.71 3.16
3759 4815 2.223572 GCCCGATAGATGCAAAACAAGG 60.224 50.000 0.00 0.00 39.76 3.61
3760 4816 2.223572 CCCGATAGATGCAAAACAAGGC 60.224 50.000 0.00 0.00 39.76 4.35
3761 4817 2.223572 CCGATAGATGCAAAACAAGGCC 60.224 50.000 0.00 0.00 39.76 5.19
3762 4818 2.684881 CGATAGATGCAAAACAAGGCCT 59.315 45.455 0.00 0.00 39.76 5.19
3763 4819 3.488047 CGATAGATGCAAAACAAGGCCTG 60.488 47.826 5.69 2.82 39.76 4.85
3764 4820 0.319405 AGATGCAAAACAAGGCCTGC 59.681 50.000 5.69 5.56 35.32 4.85
3765 4821 3.626394 TGCAAAACAAGGCCTGCA 58.374 50.000 5.69 8.87 42.28 4.41
3766 4822 1.442567 TGCAAAACAAGGCCTGCAG 59.557 52.632 5.69 6.78 39.77 4.41
3767 4823 1.957695 GCAAAACAAGGCCTGCAGC 60.958 57.895 5.69 3.68 42.60 5.25
3768 4824 1.662446 CAAAACAAGGCCTGCAGCG 60.662 57.895 5.69 2.70 45.17 5.18
3769 4825 1.827789 AAAACAAGGCCTGCAGCGA 60.828 52.632 5.69 0.00 45.17 4.93
3770 4826 1.181098 AAAACAAGGCCTGCAGCGAT 61.181 50.000 5.69 0.00 45.17 4.58
3771 4827 1.589716 AAACAAGGCCTGCAGCGATC 61.590 55.000 5.69 0.00 45.17 3.69
3772 4828 3.570638 CAAGGCCTGCAGCGATCG 61.571 66.667 5.69 11.69 45.17 3.69
3773 4829 3.774528 AAGGCCTGCAGCGATCGA 61.775 61.111 21.57 0.00 45.17 3.59
3774 4830 3.729965 AAGGCCTGCAGCGATCGAG 62.730 63.158 21.57 11.59 45.17 4.04
3777 4833 4.862092 CCTGCAGCGATCGAGCGT 62.862 66.667 25.15 8.65 43.00 5.07
3778 4834 2.882777 CTGCAGCGATCGAGCGTT 60.883 61.111 25.15 16.84 43.00 4.84
3779 4835 2.432456 TGCAGCGATCGAGCGTTT 60.432 55.556 25.15 10.67 43.00 3.60
3780 4836 2.318024 GCAGCGATCGAGCGTTTC 59.682 61.111 25.15 9.67 43.00 2.78
3781 4837 2.998667 CAGCGATCGAGCGTTTCC 59.001 61.111 25.15 7.66 43.00 3.13
3782 4838 1.517257 CAGCGATCGAGCGTTTCCT 60.517 57.895 25.15 10.08 43.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.189188 CGGTGGTAGGGCGTCGAG 62.189 72.222 0.00 0.00 0.00 4.04
167 175 3.069872 AGTTAGACGCCGATAGAGAGAGA 59.930 47.826 0.00 0.00 39.76 3.10
168 176 3.185594 CAGTTAGACGCCGATAGAGAGAG 59.814 52.174 0.00 0.00 39.76 3.20
169 177 3.132160 CAGTTAGACGCCGATAGAGAGA 58.868 50.000 0.00 0.00 39.76 3.10
170 178 2.224549 CCAGTTAGACGCCGATAGAGAG 59.775 54.545 0.00 0.00 39.76 3.20
171 179 2.219458 CCAGTTAGACGCCGATAGAGA 58.781 52.381 0.00 0.00 39.76 3.10
196 204 1.078848 CAAGAGTTCAGGCCCGGAG 60.079 63.158 0.73 0.00 0.00 4.63
197 205 2.592993 CCAAGAGTTCAGGCCCGGA 61.593 63.158 0.73 0.00 0.00 5.14
232 240 0.171903 GCATGGGCAATGACTGACAC 59.828 55.000 5.91 0.00 38.72 3.67
262 282 3.521796 GCGGAATGGCTTGGAGGC 61.522 66.667 0.00 0.00 41.77 4.70
264 284 1.524621 ATCGCGGAATGGCTTGGAG 60.525 57.895 6.13 0.00 0.00 3.86
266 286 1.656818 AACATCGCGGAATGGCTTGG 61.657 55.000 6.13 0.00 0.00 3.61
267 287 0.248215 GAACATCGCGGAATGGCTTG 60.248 55.000 6.13 0.00 0.00 4.01
395 416 3.256960 GGGCACACCTCCCTTCCA 61.257 66.667 0.00 0.00 40.66 3.53
436 457 4.838486 GCCGAGACCGTCAGAGCG 62.838 72.222 0.40 0.00 0.00 5.03
494 515 0.100861 GGACCGACGATTCCTCAGTC 59.899 60.000 0.00 0.00 0.00 3.51
549 570 5.914898 AAGTAATGGAATTGGGCAGTAAC 57.085 39.130 0.00 0.00 36.99 2.50
552 573 5.823861 AAAAAGTAATGGAATTGGGCAGT 57.176 34.783 0.00 0.00 36.99 4.40
555 576 8.450180 CACAATTAAAAAGTAATGGAATTGGGC 58.550 33.333 9.28 0.00 36.99 5.36
572 593 7.962373 CGAGCAACAGATAATCACACAATTAAA 59.038 33.333 0.00 0.00 0.00 1.52
574 595 6.816140 TCGAGCAACAGATAATCACACAATTA 59.184 34.615 0.00 0.00 0.00 1.40
598 619 6.810182 CCAAGATCAACTTCAAATCAACCATC 59.190 38.462 0.00 0.00 36.61 3.51
613 634 9.565213 CTGAAATCTAACAATTCCAAGATCAAC 57.435 33.333 0.00 0.00 0.00 3.18
618 639 9.573166 TTTCTCTGAAATCTAACAATTCCAAGA 57.427 29.630 0.00 0.00 0.00 3.02
666 745 4.650734 TCACATCATTGCTACCAAGAACA 58.349 39.130 0.00 0.00 33.80 3.18
696 775 9.638239 GAACTAGCAAATTCATTCAACCAAATA 57.362 29.630 0.00 0.00 0.00 1.40
717 796 3.132925 GTGTTGGGCGTTACAAGAACTA 58.867 45.455 0.00 0.00 0.00 2.24
718 797 1.944709 GTGTTGGGCGTTACAAGAACT 59.055 47.619 0.00 0.00 0.00 3.01
720 799 0.938713 CGTGTTGGGCGTTACAAGAA 59.061 50.000 0.00 0.00 0.00 2.52
721 800 0.881159 CCGTGTTGGGCGTTACAAGA 60.881 55.000 0.00 0.00 0.00 3.02
722 801 0.881159 TCCGTGTTGGGCGTTACAAG 60.881 55.000 0.00 0.00 38.76 3.16
724 803 1.301087 CTCCGTGTTGGGCGTTACA 60.301 57.895 0.00 0.00 38.76 2.41
725 804 0.038343 TACTCCGTGTTGGGCGTTAC 60.038 55.000 0.00 0.00 38.76 2.50
727 806 1.005394 CTACTCCGTGTTGGGCGTT 60.005 57.895 0.00 0.00 38.76 4.84
728 807 0.895100 TACTACTCCGTGTTGGGCGT 60.895 55.000 0.00 0.00 38.76 5.68
729 808 0.458669 ATACTACTCCGTGTTGGGCG 59.541 55.000 0.00 0.00 38.76 6.13
730 809 3.806625 TTATACTACTCCGTGTTGGGC 57.193 47.619 0.00 0.00 38.76 5.36
732 811 5.462398 GCAGATTTATACTACTCCGTGTTGG 59.538 44.000 0.00 0.00 40.09 3.77
735 814 5.847111 TGCAGATTTATACTACTCCGTGT 57.153 39.130 0.00 0.00 0.00 4.49
736 815 8.082852 AGTAATGCAGATTTATACTACTCCGTG 58.917 37.037 0.00 0.00 0.00 4.94
738 817 7.062371 GCAGTAATGCAGATTTATACTACTCCG 59.938 40.741 10.86 0.00 34.41 4.63
739 818 7.872993 TGCAGTAATGCAGATTTATACTACTCC 59.127 37.037 14.87 0.00 40.23 3.85
740 819 8.704234 GTGCAGTAATGCAGATTTATACTACTC 58.296 37.037 19.62 0.00 46.32 2.59
741 820 8.424918 AGTGCAGTAATGCAGATTTATACTACT 58.575 33.333 19.62 4.39 46.32 2.57
742 821 8.491152 CAGTGCAGTAATGCAGATTTATACTAC 58.509 37.037 19.62 1.89 46.32 2.73
798 886 5.729510 AGGAGAAGACTAGCAATGAGAAAC 58.270 41.667 0.00 0.00 0.00 2.78
804 892 6.166279 TGTTGTAAGGAGAAGACTAGCAATG 58.834 40.000 0.00 0.00 0.00 2.82
809 897 5.639931 GCCTTTGTTGTAAGGAGAAGACTAG 59.360 44.000 6.59 0.00 46.28 2.57
810 898 5.307196 AGCCTTTGTTGTAAGGAGAAGACTA 59.693 40.000 6.59 0.00 46.28 2.59
888 981 5.140454 ACCAGTGGCTAGTGAAGAATTTTT 58.860 37.500 9.78 0.00 0.00 1.94
891 984 4.080863 CCTACCAGTGGCTAGTGAAGAATT 60.081 45.833 9.78 0.00 0.00 2.17
892 985 3.452627 CCTACCAGTGGCTAGTGAAGAAT 59.547 47.826 9.78 0.00 0.00 2.40
894 987 2.457598 CCTACCAGTGGCTAGTGAAGA 58.542 52.381 9.78 0.00 0.00 2.87
899 992 1.203262 TCAACCCTACCAGTGGCTAGT 60.203 52.381 9.78 0.00 0.00 2.57
929 1023 7.646922 CACAAGAGAAAAGAAATTGTCAGGAAG 59.353 37.037 0.00 0.00 32.01 3.46
935 1029 6.914757 CAGACCACAAGAGAAAAGAAATTGTC 59.085 38.462 0.00 0.00 32.01 3.18
1110 1204 1.004560 TGACTGGAGCTCCGCAAAG 60.005 57.895 27.43 20.61 39.43 2.77
1116 1210 3.791586 GGCCCTGACTGGAGCTCC 61.792 72.222 26.78 26.78 38.35 4.70
1185 1279 5.708697 TGAATACAGTTAGTGTCGAGGAGAA 59.291 40.000 0.00 0.00 40.94 2.87
1194 1288 5.578157 ACCCCTTTGAATACAGTTAGTGT 57.422 39.130 0.00 0.00 43.86 3.55
1197 1291 6.151144 CCTCAAACCCCTTTGAATACAGTTAG 59.849 42.308 0.00 0.00 44.18 2.34
1199 1293 4.832823 CCTCAAACCCCTTTGAATACAGTT 59.167 41.667 0.00 0.00 44.18 3.16
1209 1304 1.691163 CCACAACCCTCAAACCCCTTT 60.691 52.381 0.00 0.00 0.00 3.11
1210 1305 0.105709 CCACAACCCTCAAACCCCTT 60.106 55.000 0.00 0.00 0.00 3.95
1221 1316 0.110486 AGTCACATCCACCACAACCC 59.890 55.000 0.00 0.00 0.00 4.11
1224 1319 1.476652 CCACAGTCACATCCACCACAA 60.477 52.381 0.00 0.00 0.00 3.33
1226 1321 0.396435 TCCACAGTCACATCCACCAC 59.604 55.000 0.00 0.00 0.00 4.16
1227 1322 0.686789 CTCCACAGTCACATCCACCA 59.313 55.000 0.00 0.00 0.00 4.17
1238 1333 4.371624 TTCCATCAAACATCTCCACAGT 57.628 40.909 0.00 0.00 0.00 3.55
1247 1342 5.118990 CCTCGTCTACATTCCATCAAACAT 58.881 41.667 0.00 0.00 0.00 2.71
1288 1383 2.643801 TCATGTCATGCCATAGCCCATA 59.356 45.455 8.03 0.00 38.69 2.74
1289 1384 1.426215 TCATGTCATGCCATAGCCCAT 59.574 47.619 8.03 0.00 38.69 4.00
1290 1385 0.845337 TCATGTCATGCCATAGCCCA 59.155 50.000 8.03 0.00 38.69 5.36
1291 1386 1.985473 TTCATGTCATGCCATAGCCC 58.015 50.000 8.03 0.00 38.69 5.19
1292 1387 2.889045 ACATTCATGTCATGCCATAGCC 59.111 45.455 8.03 0.00 35.87 3.93
1293 1388 3.317149 ACACATTCATGTCATGCCATAGC 59.683 43.478 8.03 0.00 39.39 2.97
1294 1389 5.509716 AACACATTCATGTCATGCCATAG 57.490 39.130 8.03 1.10 39.39 2.23
1304 1399 6.580788 TGGAATTGAACAAACACATTCATGT 58.419 32.000 0.00 0.00 42.84 3.21
1334 1429 7.230222 CAGCAGACGACTAAAAGAAATACTTG 58.770 38.462 0.00 0.00 38.98 3.16
1338 1433 6.032956 TCCAGCAGACGACTAAAAGAAATA 57.967 37.500 0.00 0.00 0.00 1.40
1352 1447 5.546526 CCCTCTATAGAATTTCCAGCAGAC 58.453 45.833 3.57 0.00 0.00 3.51
1356 1451 4.322567 CTGCCCTCTATAGAATTTCCAGC 58.677 47.826 3.57 0.56 0.00 4.85
1360 1455 3.329225 AGGCCTGCCCTCTATAGAATTTC 59.671 47.826 3.11 0.00 41.21 2.17
1361 1456 3.073650 CAGGCCTGCCCTCTATAGAATTT 59.926 47.826 22.33 0.00 44.09 1.82
1362 1457 2.641815 CAGGCCTGCCCTCTATAGAATT 59.358 50.000 22.33 0.00 44.09 2.17
1363 1458 2.264455 CAGGCCTGCCCTCTATAGAAT 58.736 52.381 22.33 0.00 44.09 2.40
1364 1459 1.722034 CAGGCCTGCCCTCTATAGAA 58.278 55.000 22.33 0.00 44.09 2.10
1365 1460 0.178921 CCAGGCCTGCCCTCTATAGA 60.179 60.000 28.39 1.69 44.09 1.98
1366 1461 1.835927 GCCAGGCCTGCCCTCTATAG 61.836 65.000 28.39 11.31 44.09 1.31
1367 1462 1.843376 GCCAGGCCTGCCCTCTATA 60.843 63.158 28.39 0.00 44.09 1.31
1368 1463 3.174265 GCCAGGCCTGCCCTCTAT 61.174 66.667 28.39 0.00 44.09 1.98
1380 1475 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
1381 1476 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
1382 1477 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
1383 1478 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
1384 1479 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
1385 1480 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
1386 1481 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
1392 1487 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
1393 1488 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
1394 1489 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
1395 1490 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
1396 1491 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
1397 1492 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
1398 1493 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
1409 1504 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
1410 1505 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
1411 1506 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
1412 1507 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
1413 1508 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
1414 1509 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
1415 1510 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
1416 1511 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
1417 1512 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
1418 1513 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
1427 1522 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
1428 1523 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
1429 1524 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
1430 1525 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
1431 1526 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
1432 1527 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
1433 1528 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
1434 1529 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
1436 1531 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
1437 1532 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
1438 1533 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
1439 1534 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
1450 1545 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
1451 1546 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
1452 1547 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
1453 1548 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
1454 1549 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
1455 1550 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
1456 1551 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
1457 1552 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
1458 1553 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
1459 1554 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
1460 1555 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
1461 1556 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
1462 1557 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
1463 1558 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
1464 1559 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
1465 1560 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
1466 1561 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
1467 1562 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
1468 1563 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
1469 1564 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
1470 1565 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
1471 1566 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
1472 1567 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
1473 1568 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
1474 1569 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
1475 1570 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
1476 1571 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
1477 1572 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
1478 1573 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
1479 1574 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
1480 1575 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
1481 1576 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
1482 1577 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
1483 1578 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
1485 1580 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
1486 1581 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
1487 1582 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
1488 1583 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
1489 1584 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
1490 1585 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
1491 1586 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
1499 1594 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
1500 1595 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
1501 1596 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
1502 1597 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
1503 1598 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
1504 1599 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
1505 1600 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
1506 1601 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
1507 1602 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
1508 1603 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
1509 1604 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
1510 1605 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
1511 1606 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
1512 1607 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
1513 1608 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
1514 1609 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
1515 1610 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
1516 1611 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
1517 1612 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
1518 1613 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
1519 1614 0.179020 CAAAGGACAGACCCAGTGCA 60.179 55.000 0.00 0.00 40.05 4.57
1520 1615 0.179018 ACAAAGGACAGACCCAGTGC 60.179 55.000 0.00 0.00 40.05 4.40
1521 1616 1.417890 AGACAAAGGACAGACCCAGTG 59.582 52.381 0.00 0.00 40.05 3.66
1522 1617 1.417890 CAGACAAAGGACAGACCCAGT 59.582 52.381 0.00 0.00 40.05 4.00
1523 1618 1.879796 GCAGACAAAGGACAGACCCAG 60.880 57.143 0.00 0.00 40.05 4.45
1524 1619 0.108585 GCAGACAAAGGACAGACCCA 59.891 55.000 0.00 0.00 40.05 4.51
1525 1620 0.398318 AGCAGACAAAGGACAGACCC 59.602 55.000 0.00 0.00 40.05 4.46
1526 1621 1.517242 CAGCAGACAAAGGACAGACC 58.483 55.000 0.00 0.00 39.35 3.85
1527 1622 1.070758 TCCAGCAGACAAAGGACAGAC 59.929 52.381 0.00 0.00 0.00 3.51
1528 1623 1.423584 TCCAGCAGACAAAGGACAGA 58.576 50.000 0.00 0.00 0.00 3.41
1529 1624 2.260844 TTCCAGCAGACAAAGGACAG 57.739 50.000 0.00 0.00 0.00 3.51
1530 1625 2.727123 TTTCCAGCAGACAAAGGACA 57.273 45.000 0.00 0.00 0.00 4.02
1531 1626 3.823304 AGAATTTCCAGCAGACAAAGGAC 59.177 43.478 0.00 0.00 0.00 3.85
1532 1627 4.104383 AGAATTTCCAGCAGACAAAGGA 57.896 40.909 0.00 0.00 0.00 3.36
1533 1628 5.163581 CCATAGAATTTCCAGCAGACAAAGG 60.164 44.000 0.00 0.00 0.00 3.11
1534 1629 5.678107 GCCATAGAATTTCCAGCAGACAAAG 60.678 44.000 0.00 0.00 0.00 2.77
1535 1630 4.158394 GCCATAGAATTTCCAGCAGACAAA 59.842 41.667 0.00 0.00 0.00 2.83
1536 1631 3.696051 GCCATAGAATTTCCAGCAGACAA 59.304 43.478 0.00 0.00 0.00 3.18
1537 1632 3.282021 GCCATAGAATTTCCAGCAGACA 58.718 45.455 0.00 0.00 0.00 3.41
1538 1633 2.289002 CGCCATAGAATTTCCAGCAGAC 59.711 50.000 0.00 0.00 0.00 3.51
1539 1634 2.092968 ACGCCATAGAATTTCCAGCAGA 60.093 45.455 0.00 0.00 0.00 4.26
1545 1640 4.142038 ACCCAATACGCCATAGAATTTCC 58.858 43.478 0.00 0.00 0.00 3.13
1546 1641 5.767816 AACCCAATACGCCATAGAATTTC 57.232 39.130 0.00 0.00 0.00 2.17
1550 1645 3.942748 GACAAACCCAATACGCCATAGAA 59.057 43.478 0.00 0.00 0.00 2.10
1552 1647 2.616842 GGACAAACCCAATACGCCATAG 59.383 50.000 0.00 0.00 0.00 2.23
1559 1654 6.754193 TCATCTTTTTGGACAAACCCAATAC 58.246 36.000 0.00 0.00 44.83 1.89
1568 1663 5.010617 GCCTAGGTTTCATCTTTTTGGACAA 59.989 40.000 11.31 0.00 0.00 3.18
1577 1672 5.248380 AGTTTCTGCCTAGGTTTCATCTT 57.752 39.130 11.31 0.00 0.00 2.40
1595 1690 6.899393 TTTCAGGCATGAATCAGTTAGTTT 57.101 33.333 15.42 0.00 44.75 2.66
1646 1742 2.326428 ACCCAGTTCGTATCCATAGGG 58.674 52.381 0.00 0.00 40.88 3.53
1650 1746 5.659971 ACTTTAGTACCCAGTTCGTATCCAT 59.340 40.000 0.00 0.00 0.00 3.41
1714 1817 8.567948 CCTGTAGCAAATAAAGAAACTGAAAGA 58.432 33.333 0.00 0.00 37.43 2.52
1715 1818 7.327032 GCCTGTAGCAAATAAAGAAACTGAAAG 59.673 37.037 0.00 0.00 42.97 2.62
1741 1844 7.621102 CATGAATTTGTGATGATCATTTGCAG 58.379 34.615 10.14 0.00 0.00 4.41
1750 1853 6.157904 TCAAAACGCATGAATTTGTGATGAT 58.842 32.000 14.14 0.00 35.92 2.45
1751 1854 5.527033 TCAAAACGCATGAATTTGTGATGA 58.473 33.333 14.14 4.93 35.92 2.92
1767 1870 3.380479 TCTACAGACCCACTCAAAACG 57.620 47.619 0.00 0.00 0.00 3.60
1804 1907 3.949842 ACCTAGGGTAAGTGACGAAAC 57.050 47.619 14.81 0.00 32.11 2.78
1854 2553 0.030638 AGCCACAATGTGCGTTTGAC 59.969 50.000 8.05 0.00 31.34 3.18
1860 2559 1.229975 TGTCAGAGCCACAATGTGCG 61.230 55.000 8.05 2.72 31.34 5.34
1997 2696 7.724061 TCCTTTTCCTTTGCAAAGAGTACTTAT 59.276 33.333 35.25 0.00 38.28 1.73
2024 2723 9.669887 TGATGAATGCAGTATAATATGTATGCA 57.330 29.630 9.96 9.96 46.50 3.96
2091 2790 9.608718 AGGTTCTCTAGTATAAATTAGGCAGAT 57.391 33.333 0.00 0.00 0.00 2.90
2226 3019 4.911522 AGACTACCCTAGCTATCTCAGAGT 59.088 45.833 0.00 0.00 0.00 3.24
2274 3075 4.722526 TCCAAATCTCCAAGGACAAGAA 57.277 40.909 0.00 0.00 0.00 2.52
2278 3079 5.147032 ACAAATTCCAAATCTCCAAGGACA 58.853 37.500 0.00 0.00 0.00 4.02
2279 3080 5.728637 ACAAATTCCAAATCTCCAAGGAC 57.271 39.130 0.00 0.00 0.00 3.85
2384 3185 6.787085 AACTTGTAGATTGTACAGCTTCAC 57.213 37.500 5.76 1.17 0.00 3.18
2402 3203 8.816640 AAAAACTGGTTAAGATGCATAACTTG 57.183 30.769 0.00 1.20 34.44 3.16
2435 3236 2.805194 TGCAAATGGGATGTCATGACA 58.195 42.857 29.67 29.67 46.44 3.58
2436 3237 3.872511 TTGCAAATGGGATGTCATGAC 57.127 42.857 19.27 19.27 0.00 3.06
2438 3239 6.107343 TGTTAATTGCAAATGGGATGTCATG 58.893 36.000 1.71 0.00 0.00 3.07
2441 3242 5.063817 GCTTGTTAATTGCAAATGGGATGTC 59.936 40.000 1.71 0.00 0.00 3.06
2443 3244 4.936411 TGCTTGTTAATTGCAAATGGGATG 59.064 37.500 1.71 0.00 33.48 3.51
2447 3248 5.670149 TTGTGCTTGTTAATTGCAAATGG 57.330 34.783 1.71 0.00 38.50 3.16
2448 3249 9.268255 CATATTTGTGCTTGTTAATTGCAAATG 57.732 29.630 1.71 0.00 38.50 2.32
2449 3250 8.452534 CCATATTTGTGCTTGTTAATTGCAAAT 58.547 29.630 1.71 0.00 38.50 2.32
2457 3258 6.892658 AGTCACCATATTTGTGCTTGTTAA 57.107 33.333 0.00 0.00 33.71 2.01
2465 3266 8.967218 CAAACAAAAGTAGTCACCATATTTGTG 58.033 33.333 0.00 0.00 38.91 3.33
2466 3267 8.908903 TCAAACAAAAGTAGTCACCATATTTGT 58.091 29.630 0.00 0.00 40.18 2.83
2467 3268 9.743057 TTCAAACAAAAGTAGTCACCATATTTG 57.257 29.630 0.00 0.00 33.68 2.32
2473 3274 9.743057 CAAATATTCAAACAAAAGTAGTCACCA 57.257 29.630 0.00 0.00 0.00 4.17
2474 3275 9.744468 ACAAATATTCAAACAAAAGTAGTCACC 57.256 29.630 0.00 0.00 0.00 4.02
2503 3304 1.243342 TGCAAGGGTACTGCACATGC 61.243 55.000 4.29 0.00 42.50 4.06
2504 3305 1.068333 GTTGCAAGGGTACTGCACATG 60.068 52.381 7.70 0.00 38.37 3.21
2630 3431 8.378565 GGATATCTTACTTTTCCATGGATCTCA 58.621 37.037 17.06 0.00 0.00 3.27
2649 3450 9.726652 ATCACATATAGATGTTGAGGGATATCT 57.273 33.333 0.00 0.00 44.18 1.98
2704 3505 8.330302 GCAACCTGCATAAAAATAAACATGATC 58.670 33.333 0.00 0.00 44.26 2.92
2738 3543 2.202932 GTGGCCGTCGATGCATCT 60.203 61.111 23.73 0.00 0.00 2.90
2773 3578 0.846693 AACAGGTTCTTCAGGCTGGT 59.153 50.000 15.73 0.00 0.00 4.00
2885 3691 0.756294 ACACCAGTCATTCACGGTGA 59.244 50.000 14.01 6.76 45.28 4.02
2888 3694 2.448926 TGTACACCAGTCATTCACGG 57.551 50.000 0.00 0.00 0.00 4.94
2891 3697 5.056480 CAGAAGTTGTACACCAGTCATTCA 58.944 41.667 0.00 0.00 0.00 2.57
2892 3698 4.452455 CCAGAAGTTGTACACCAGTCATTC 59.548 45.833 0.00 0.00 0.00 2.67
2897 3703 2.368875 CTCCCAGAAGTTGTACACCAGT 59.631 50.000 0.00 0.00 0.00 4.00
2926 3734 2.314549 TCCCCCTAAAATGCCTGAACAT 59.685 45.455 0.00 0.00 0.00 2.71
2931 3739 1.566231 AGTCTCCCCCTAAAATGCCTG 59.434 52.381 0.00 0.00 0.00 4.85
2935 3743 4.202441 CATCACAGTCTCCCCCTAAAATG 58.798 47.826 0.00 0.00 0.00 2.32
3016 3840 2.438795 GCTTTGGCCTGTACCCCA 59.561 61.111 3.32 0.00 0.00 4.96
3053 3881 3.769739 AGCATAATCGGCCAAGATACA 57.230 42.857 2.24 0.00 0.00 2.29
3057 3885 2.708216 TCAAGCATAATCGGCCAAGA 57.292 45.000 2.24 0.00 0.00 3.02
3058 3886 2.880268 TGATCAAGCATAATCGGCCAAG 59.120 45.455 2.24 0.00 0.00 3.61
3059 3887 2.929641 TGATCAAGCATAATCGGCCAA 58.070 42.857 2.24 0.00 0.00 4.52
3062 3890 2.415090 GCCATGATCAAGCATAATCGGC 60.415 50.000 14.43 5.73 0.00 5.54
3063 3891 2.163010 GGCCATGATCAAGCATAATCGG 59.837 50.000 19.34 3.27 0.00 4.18
3066 3894 3.162666 CCAGGCCATGATCAAGCATAAT 58.837 45.455 19.34 3.46 0.00 1.28
3068 3896 1.202964 CCCAGGCCATGATCAAGCATA 60.203 52.381 19.34 0.00 0.00 3.14
3126 3971 0.893270 CCATCACGGCCTGAAAACCA 60.893 55.000 0.00 0.00 30.60 3.67
3190 4035 3.028130 GGGAAAACAGGGTCAGACAAAA 58.972 45.455 2.17 0.00 0.00 2.44
3213 4059 0.842467 AGGGCCCTAACTGACTGCTT 60.842 55.000 27.42 0.00 0.00 3.91
3259 4109 0.317770 AATTTGACAGCAACACCGCG 60.318 50.000 0.00 0.00 36.85 6.46
3285 4136 5.690464 ATTTTGGTGGCCTTGCATTATTA 57.310 34.783 3.32 0.00 0.00 0.98
3286 4137 4.573021 ATTTTGGTGGCCTTGCATTATT 57.427 36.364 3.32 0.00 0.00 1.40
3287 4138 4.573021 AATTTTGGTGGCCTTGCATTAT 57.427 36.364 3.32 0.00 0.00 1.28
3397 4441 0.108520 TCTCGGTAACCACGCCATTC 60.109 55.000 0.00 0.00 0.00 2.67
3400 4444 0.322322 ATTTCTCGGTAACCACGCCA 59.678 50.000 0.00 0.00 0.00 5.69
3456 4509 7.130269 CGTCGAATTAATTTCAAATACCCCTC 58.870 38.462 1.43 0.00 33.66 4.30
3478 4531 0.316689 CACGGCAAAGAAACCACGTC 60.317 55.000 0.00 0.00 31.61 4.34
3480 4533 1.657181 GCACGGCAAAGAAACCACG 60.657 57.895 0.00 0.00 0.00 4.94
3537 4590 5.001232 TCATAGTGTAACCTTTTGTCAGGC 58.999 41.667 0.00 0.00 37.47 4.85
3542 4595 5.313712 CCTGGTCATAGTGTAACCTTTTGT 58.686 41.667 0.00 0.00 37.80 2.83
3554 4607 0.911525 ACTGCCTGCCTGGTCATAGT 60.912 55.000 0.00 0.00 38.35 2.12
3600 4656 3.394836 GCGTTGGCTCCCTCCTCT 61.395 66.667 0.00 0.00 35.83 3.69
3633 4689 2.409870 GCCCATGACGGCCTTCTTG 61.410 63.158 15.89 15.89 43.66 3.02
3649 4705 0.943835 GCCAATCAACCAAACACGCC 60.944 55.000 0.00 0.00 0.00 5.68
3650 4706 0.943835 GGCCAATCAACCAAACACGC 60.944 55.000 0.00 0.00 0.00 5.34
3651 4707 0.319469 GGGCCAATCAACCAAACACG 60.319 55.000 4.39 0.00 0.00 4.49
3652 4708 0.319469 CGGGCCAATCAACCAAACAC 60.319 55.000 4.39 0.00 0.00 3.32
3653 4709 2.045280 CGGGCCAATCAACCAAACA 58.955 52.632 4.39 0.00 0.00 2.83
3654 4710 1.374125 GCGGGCCAATCAACCAAAC 60.374 57.895 4.39 0.00 0.00 2.93
3655 4711 1.834378 TGCGGGCCAATCAACCAAA 60.834 52.632 4.39 0.00 0.00 3.28
3656 4712 2.203552 TGCGGGCCAATCAACCAA 60.204 55.556 4.39 0.00 0.00 3.67
3657 4713 2.988684 GTGCGGGCCAATCAACCA 60.989 61.111 4.39 0.00 0.00 3.67
3658 4714 3.758931 GGTGCGGGCCAATCAACC 61.759 66.667 4.39 0.18 0.00 3.77
3659 4715 2.676471 AGGTGCGGGCCAATCAAC 60.676 61.111 4.39 0.84 0.00 3.18
3660 4716 2.676121 CAGGTGCGGGCCAATCAA 60.676 61.111 4.39 0.00 0.00 2.57
3661 4717 4.738998 CCAGGTGCGGGCCAATCA 62.739 66.667 4.39 0.00 0.00 2.57
3675 4731 4.889112 ATGCGGGATGCCAGCCAG 62.889 66.667 15.17 0.00 43.83 4.85
3683 4739 0.527113 TGACTTTTGCATGCGGGATG 59.473 50.000 14.09 4.99 34.84 3.51
3684 4740 0.813184 CTGACTTTTGCATGCGGGAT 59.187 50.000 14.09 0.00 0.00 3.85
3685 4741 0.250684 TCTGACTTTTGCATGCGGGA 60.251 50.000 14.09 0.00 0.00 5.14
3686 4742 0.169672 CTCTGACTTTTGCATGCGGG 59.830 55.000 14.09 5.38 0.00 6.13
3687 4743 0.877071 ACTCTGACTTTTGCATGCGG 59.123 50.000 14.09 5.75 0.00 5.69
3688 4744 1.265095 ACACTCTGACTTTTGCATGCG 59.735 47.619 14.09 0.35 0.00 4.73
3689 4745 3.360249 AACACTCTGACTTTTGCATGC 57.640 42.857 11.82 11.82 0.00 4.06
3690 4746 4.046462 CCAAACACTCTGACTTTTGCATG 58.954 43.478 0.00 0.00 0.00 4.06
3691 4747 3.701040 ACCAAACACTCTGACTTTTGCAT 59.299 39.130 0.00 0.00 0.00 3.96
3692 4748 3.088532 ACCAAACACTCTGACTTTTGCA 58.911 40.909 0.00 0.00 0.00 4.08
3693 4749 3.782889 ACCAAACACTCTGACTTTTGC 57.217 42.857 0.00 0.00 0.00 3.68
3694 4750 5.102313 GGAAACCAAACACTCTGACTTTTG 58.898 41.667 0.00 0.00 0.00 2.44
3695 4751 5.016831 AGGAAACCAAACACTCTGACTTTT 58.983 37.500 0.00 0.00 0.00 2.27
3696 4752 4.399303 CAGGAAACCAAACACTCTGACTTT 59.601 41.667 0.00 0.00 0.00 2.66
3697 4753 3.947834 CAGGAAACCAAACACTCTGACTT 59.052 43.478 0.00 0.00 0.00 3.01
3698 4754 3.054361 ACAGGAAACCAAACACTCTGACT 60.054 43.478 0.00 0.00 0.00 3.41
3699 4755 3.065371 CACAGGAAACCAAACACTCTGAC 59.935 47.826 0.00 0.00 0.00 3.51
3700 4756 3.278574 CACAGGAAACCAAACACTCTGA 58.721 45.455 0.00 0.00 0.00 3.27
3701 4757 3.016736 ACACAGGAAACCAAACACTCTG 58.983 45.455 0.00 0.00 0.00 3.35
3702 4758 3.016736 CACACAGGAAACCAAACACTCT 58.983 45.455 0.00 0.00 0.00 3.24
3703 4759 3.013921 TCACACAGGAAACCAAACACTC 58.986 45.455 0.00 0.00 0.00 3.51
3704 4760 2.752903 GTCACACAGGAAACCAAACACT 59.247 45.455 0.00 0.00 0.00 3.55
3705 4761 2.159296 GGTCACACAGGAAACCAAACAC 60.159 50.000 0.00 0.00 0.00 3.32
3706 4762 2.096248 GGTCACACAGGAAACCAAACA 58.904 47.619 0.00 0.00 0.00 2.83
3707 4763 1.407618 GGGTCACACAGGAAACCAAAC 59.592 52.381 0.00 0.00 33.27 2.93
3708 4764 1.686741 GGGGTCACACAGGAAACCAAA 60.687 52.381 0.00 0.00 33.27 3.28
3709 4765 0.106419 GGGGTCACACAGGAAACCAA 60.106 55.000 0.00 0.00 33.27 3.67
3710 4766 0.991355 AGGGGTCACACAGGAAACCA 60.991 55.000 0.00 0.00 33.27 3.67
3711 4767 0.185175 AAGGGGTCACACAGGAAACC 59.815 55.000 0.00 0.00 0.00 3.27
3712 4768 1.605753 GAAGGGGTCACACAGGAAAC 58.394 55.000 0.00 0.00 0.00 2.78
3713 4769 0.107831 CGAAGGGGTCACACAGGAAA 59.892 55.000 0.00 0.00 0.00 3.13
3714 4770 1.752198 CGAAGGGGTCACACAGGAA 59.248 57.895 0.00 0.00 0.00 3.36
3715 4771 3.466881 CGAAGGGGTCACACAGGA 58.533 61.111 0.00 0.00 0.00 3.86
3733 4789 2.359230 GCATCTATCGGGCCAGGC 60.359 66.667 4.39 1.26 0.00 4.85
3734 4790 0.179020 TTTGCATCTATCGGGCCAGG 60.179 55.000 4.39 0.00 0.00 4.45
3735 4791 1.334869 GTTTTGCATCTATCGGGCCAG 59.665 52.381 4.39 0.00 0.00 4.85
3736 4792 1.340502 TGTTTTGCATCTATCGGGCCA 60.341 47.619 4.39 0.00 0.00 5.36
3737 4793 1.388547 TGTTTTGCATCTATCGGGCC 58.611 50.000 0.00 0.00 0.00 5.80
3738 4794 2.223572 CCTTGTTTTGCATCTATCGGGC 60.224 50.000 0.00 0.00 0.00 6.13
3739 4795 2.223572 GCCTTGTTTTGCATCTATCGGG 60.224 50.000 0.00 0.00 0.00 5.14
3740 4796 2.223572 GGCCTTGTTTTGCATCTATCGG 60.224 50.000 0.00 0.00 0.00 4.18
3741 4797 2.684881 AGGCCTTGTTTTGCATCTATCG 59.315 45.455 0.00 0.00 0.00 2.92
3742 4798 3.736126 GCAGGCCTTGTTTTGCATCTATC 60.736 47.826 0.00 0.00 36.59 2.08
3743 4799 2.167075 GCAGGCCTTGTTTTGCATCTAT 59.833 45.455 0.00 0.00 36.59 1.98
3744 4800 1.545582 GCAGGCCTTGTTTTGCATCTA 59.454 47.619 0.00 0.00 36.59 1.98
3745 4801 0.319405 GCAGGCCTTGTTTTGCATCT 59.681 50.000 0.00 0.00 36.59 2.90
3746 4802 0.033781 TGCAGGCCTTGTTTTGCATC 59.966 50.000 0.00 0.00 41.23 3.91
3747 4803 0.034337 CTGCAGGCCTTGTTTTGCAT 59.966 50.000 14.71 0.00 44.61 3.96
3748 4804 1.442567 CTGCAGGCCTTGTTTTGCA 59.557 52.632 13.77 13.77 43.62 4.08
3749 4805 1.957695 GCTGCAGGCCTTGTTTTGC 60.958 57.895 17.12 3.38 37.09 3.68
3750 4806 1.662446 CGCTGCAGGCCTTGTTTTG 60.662 57.895 17.12 0.00 37.74 2.44
3751 4807 1.181098 ATCGCTGCAGGCCTTGTTTT 61.181 50.000 17.12 0.00 37.74 2.43
3752 4808 1.589716 GATCGCTGCAGGCCTTGTTT 61.590 55.000 17.12 0.00 37.74 2.83
3753 4809 2.034687 ATCGCTGCAGGCCTTGTT 59.965 55.556 17.12 0.00 37.74 2.83
3754 4810 2.437359 GATCGCTGCAGGCCTTGT 60.437 61.111 17.12 0.00 37.74 3.16
3755 4811 3.570638 CGATCGCTGCAGGCCTTG 61.571 66.667 17.12 0.00 37.74 3.61
3756 4812 3.729965 CTCGATCGCTGCAGGCCTT 62.730 63.158 17.12 0.00 37.74 4.35
3757 4813 4.218578 CTCGATCGCTGCAGGCCT 62.219 66.667 17.12 0.00 37.74 5.19
3760 4816 4.862092 ACGCTCGATCGCTGCAGG 62.862 66.667 24.60 15.53 0.00 4.85
3761 4817 2.340246 GAAACGCTCGATCGCTGCAG 62.340 60.000 24.60 10.11 0.00 4.41
3762 4818 2.432456 AAACGCTCGATCGCTGCA 60.432 55.556 24.60 4.24 0.00 4.41
3763 4819 2.318024 GAAACGCTCGATCGCTGC 59.682 61.111 11.09 15.73 0.00 5.25
3764 4820 1.517257 AGGAAACGCTCGATCGCTG 60.517 57.895 11.09 6.91 0.00 5.18
3765 4821 2.885861 AGGAAACGCTCGATCGCT 59.114 55.556 11.09 0.00 0.00 4.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.