Multiple sequence alignment - TraesCS7A01G116900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G116900 chr7A 100.000 4023 0 0 1 4023 74668000 74672022 0.000000e+00 7430.0
1 TraesCS7A01G116900 chr7A 90.710 549 29 8 985 1511 70805886 70805338 0.000000e+00 712.0
2 TraesCS7A01G116900 chr7A 89.800 500 42 5 3525 4023 70779058 70778567 2.040000e-177 632.0
3 TraesCS7A01G116900 chr7A 90.598 468 22 10 2770 3219 70781161 70780698 5.750000e-168 601.0
4 TraesCS7A01G116900 chr7A 93.581 296 19 0 1174 1469 70451939 70451644 3.690000e-120 442.0
5 TraesCS7A01G116900 chr7A 85.280 428 21 6 1509 1919 70805310 70804908 1.740000e-108 403.0
6 TraesCS7A01G116900 chr7A 83.715 393 60 4 991 1381 74601234 74601624 6.350000e-98 368.0
7 TraesCS7A01G116900 chr7A 90.040 251 15 3 3217 3467 70780602 70780362 2.330000e-82 316.0
8 TraesCS7A01G116900 chr7A 83.648 318 10 9 2733 3031 645738288 645737994 1.110000e-65 261.0
9 TraesCS7A01G116900 chr7A 86.111 252 19 10 2489 2733 70781481 70781239 1.430000e-64 257.0
10 TraesCS7A01G116900 chr7A 84.252 254 20 11 2499 2733 645738567 645738315 3.130000e-56 230.0
11 TraesCS7A01G116900 chr7A 91.772 158 12 1 3060 3217 74608505 74608661 6.770000e-53 219.0
12 TraesCS7A01G116900 chr7A 81.034 290 27 15 1988 2277 70450913 70450652 5.270000e-49 206.0
13 TraesCS7A01G116900 chr7A 81.100 291 25 16 1988 2277 655611729 655611468 5.270000e-49 206.0
14 TraesCS7A01G116900 chr7A 80.903 288 27 15 1990 2277 95468520 95468779 6.820000e-48 202.0
15 TraesCS7A01G116900 chr7A 80.383 209 33 5 2814 3017 70896009 70895804 6.960000e-33 152.0
16 TraesCS7A01G116900 chr7A 98.214 56 1 0 3472 3527 70780202 70780147 9.200000e-17 99.0
17 TraesCS7A01G116900 chr7A 89.231 65 4 2 885 949 86466402 86466463 1.200000e-10 78.7
18 TraesCS7A01G116900 chr7A 93.333 45 3 0 1761 1805 74593334 74593378 2.590000e-07 67.6
19 TraesCS7A01G116900 chr7A 93.333 45 2 1 1468 1512 74548790 74548833 9.330000e-07 65.8
20 TraesCS7A01G116900 chr7D 91.924 1362 45 17 678 1991 66376296 66374952 0.000000e+00 1845.0
21 TraesCS7A01G116900 chr7D 87.284 810 32 20 752 1508 69012676 69013467 0.000000e+00 859.0
22 TraesCS7A01G116900 chr7D 91.984 499 34 4 3525 4023 69016156 69016648 0.000000e+00 695.0
23 TraesCS7A01G116900 chr7D 91.083 471 32 6 3554 4023 66370103 66369642 2.640000e-176 628.0
24 TraesCS7A01G116900 chr7D 82.415 472 58 8 1000 1469 66517106 66516658 4.880000e-104 388.0
25 TraesCS7A01G116900 chr7D 76.574 683 103 40 2555 3215 66514827 66514180 5.020000e-84 322.0
26 TraesCS7A01G116900 chr7D 85.959 292 21 3 1987 2259 69013672 69013962 1.090000e-75 294.0
27 TraesCS7A01G116900 chr7D 89.908 218 12 5 3578 3789 69017551 69017764 5.120000e-69 272.0
28 TraesCS7A01G116900 chr7D 90.050 201 12 5 3823 4023 69017767 69017959 1.860000e-63 254.0
29 TraesCS7A01G116900 chr7D 87.204 211 10 10 2425 2634 69013988 69014182 1.460000e-54 224.0
30 TraesCS7A01G116900 chr7D 93.333 135 8 1 2223 2357 66374809 66374676 8.820000e-47 198.0
31 TraesCS7A01G116900 chr7D 92.199 141 10 1 3079 3219 69014380 69014519 8.820000e-47 198.0
32 TraesCS7A01G116900 chr7D 88.485 165 11 4 2886 3046 69014226 69014386 4.100000e-45 193.0
33 TraesCS7A01G116900 chr7D 95.000 120 6 0 3089 3208 66374157 66374038 5.310000e-44 189.0
34 TraesCS7A01G116900 chr7D 88.344 163 11 5 2896 3053 66374312 66374153 5.310000e-44 189.0
35 TraesCS7A01G116900 chr7D 78.371 356 27 25 2491 2819 66374643 66374311 6.870000e-43 185.0
36 TraesCS7A01G116900 chr7D 84.615 117 18 0 570 686 66377637 66377521 2.540000e-22 117.0
37 TraesCS7A01G116900 chr7D 98.485 66 1 0 1509 1574 69013506 69013571 2.540000e-22 117.0
38 TraesCS7A01G116900 chr7D 100.000 63 0 0 1651 1713 69013595 69013657 2.540000e-22 117.0
39 TraesCS7A01G116900 chr7D 86.486 111 5 6 862 968 69055281 69055385 3.290000e-21 113.0
40 TraesCS7A01G116900 chr7D 93.333 45 3 0 1761 1805 68902745 68902789 2.590000e-07 67.6
41 TraesCS7A01G116900 chr7D 95.000 40 2 0 2607 2646 68922451 68922490 3.360000e-06 63.9
42 TraesCS7A01G116900 chr7D 97.143 35 1 0 3472 3506 69014981 69015015 4.340000e-05 60.2
43 TraesCS7A01G116900 chr7D 87.755 49 3 3 3522 3567 66372330 66372282 2.000000e-03 54.7
44 TraesCS7A01G116900 chr7B 88.493 982 71 16 985 1942 7560681 7559718 0.000000e+00 1149.0
45 TraesCS7A01G116900 chr7B 88.730 976 60 22 985 1939 10582040 10582986 0.000000e+00 1147.0
46 TraesCS7A01G116900 chr7B 85.967 734 57 18 2494 3190 7559269 7558545 0.000000e+00 743.0
47 TraesCS7A01G116900 chr7B 89.222 501 44 7 3525 4023 10603734 10604226 5.710000e-173 617.0
48 TraesCS7A01G116900 chr7B 93.581 296 19 0 1174 1469 622577178 622577473 3.690000e-120 442.0
49 TraesCS7A01G116900 chr7B 85.242 393 51 5 991 1381 9811482 9811869 8.100000e-107 398.0
50 TraesCS7A01G116900 chr7B 86.755 302 21 15 2425 2709 10583615 10583914 6.490000e-83 318.0
51 TraesCS7A01G116900 chr7B 84.615 325 39 9 1988 2306 10583109 10583428 3.020000e-81 313.0
52 TraesCS7A01G116900 chr7B 93.333 195 10 2 1988 2182 7559598 7559407 6.580000e-73 285.0
53 TraesCS7A01G116900 chr7B 89.520 229 10 7 675 894 10940183 10940406 1.100000e-70 278.0
54 TraesCS7A01G116900 chr7B 79.245 424 39 17 573 968 7561143 7560741 2.400000e-62 250.0
55 TraesCS7A01G116900 chr7B 82.699 289 30 13 3590 3863 7557891 7557608 5.200000e-59 239.0
56 TraesCS7A01G116900 chr7B 91.772 158 12 1 3060 3217 10240765 10240921 6.770000e-53 219.0
57 TraesCS7A01G116900 chr7B 94.615 130 7 0 1988 2117 154310167 154310038 6.820000e-48 202.0
58 TraesCS7A01G116900 chr7B 95.902 122 5 0 2236 2357 7559394 7559273 8.820000e-47 198.0
59 TraesCS7A01G116900 chr7B 83.700 227 19 14 2450 2660 130903078 130902854 8.820000e-47 198.0
60 TraesCS7A01G116900 chr7B 91.489 141 11 1 3079 3219 10584068 10584207 4.100000e-45 193.0
61 TraesCS7A01G116900 chr7B 86.667 135 8 2 843 967 10581846 10581980 1.510000e-29 141.0
62 TraesCS7A01G116900 chr7B 82.317 164 14 6 637 800 10580731 10580879 1.170000e-25 128.0
63 TraesCS7A01G116900 chr7B 92.045 88 6 1 3213 3299 7558487 7558400 5.460000e-24 122.0
64 TraesCS7A01G116900 chr7B 87.500 96 11 1 2552 2646 10104271 10104366 4.250000e-20 110.0
65 TraesCS7A01G116900 chr7B 98.113 53 1 0 3475 3527 10584678 10584730 4.280000e-15 93.5
66 TraesCS7A01G116900 chr7B 89.831 59 6 0 2298 2356 10583446 10583504 4.310000e-10 76.8
67 TraesCS7A01G116900 chr7B 100.000 41 0 0 521 561 10940030 10940070 4.310000e-10 76.8
68 TraesCS7A01G116900 chr7B 88.136 59 7 0 2298 2356 130903185 130903127 2.010000e-08 71.3
69 TraesCS7A01G116900 chr7B 97.059 34 0 1 2741 2773 7559073 7559040 5.620000e-04 56.5
70 TraesCS7A01G116900 chrUn 90.818 501 35 7 3525 4023 84526785 84527276 0.000000e+00 660.0
71 TraesCS7A01G116900 chrUn 88.991 218 6 11 1760 1976 84524072 84524272 1.860000e-63 254.0
72 TraesCS7A01G116900 chrUn 84.733 262 21 12 2465 2709 84524646 84524905 1.120000e-60 244.0
73 TraesCS7A01G116900 chrUn 87.273 165 12 4 2886 3046 84524906 84525065 3.190000e-41 180.0
74 TraesCS7A01G116900 chrUn 79.252 294 30 10 1987 2259 84524311 84524594 4.130000e-40 176.0
75 TraesCS7A01G116900 chrUn 90.769 130 12 0 3079 3208 84525059 84525188 1.490000e-39 174.0
76 TraesCS7A01G116900 chrUn 93.421 76 5 0 2468 2543 423877324 423877249 3.290000e-21 113.0
77 TraesCS7A01G116900 chrUn 97.143 35 1 0 2425 2459 84524620 84524654 4.340000e-05 60.2
78 TraesCS7A01G116900 chrUn 97.143 35 1 0 3472 3506 84525676 84525710 4.340000e-05 60.2
79 TraesCS7A01G116900 chrUn 97.143 35 1 0 2425 2459 423877353 423877319 4.340000e-05 60.2
80 TraesCS7A01G116900 chr1A 90.258 349 22 5 1174 1510 61237132 61236784 2.850000e-121 446.0
81 TraesCS7A01G116900 chr1A 76.454 705 76 53 1988 2664 591448915 591449557 2.350000e-77 300.0
82 TraesCS7A01G116900 chr1A 80.139 287 30 16 1991 2277 61236103 61235844 5.310000e-44 189.0
83 TraesCS7A01G116900 chr1A 87.368 95 10 2 2183 2277 424484261 424484169 1.530000e-19 108.0
84 TraesCS7A01G116900 chr2A 82.591 494 77 3 985 1469 84749101 84749594 1.030000e-115 427.0
85 TraesCS7A01G116900 chr2A 91.429 70 2 3 884 949 84748933 84749002 4.280000e-15 93.5
86 TraesCS7A01G116900 chr6A 84.416 231 18 14 2450 2664 76580463 76580691 1.130000e-50 211.0
87 TraesCS7A01G116900 chr5B 84.416 231 18 14 2450 2664 89070011 89069783 1.130000e-50 211.0
88 TraesCS7A01G116900 chr5B 93.077 130 9 0 1988 2117 13370953 13370824 1.480000e-44 191.0
89 TraesCS7A01G116900 chr5B 91.304 46 4 0 2298 2343 89070118 89070073 3.360000e-06 63.9
90 TraesCS7A01G116900 chr3A 80.690 290 28 15 1988 2277 129249071 129248810 2.450000e-47 200.0
91 TraesCS7A01G116900 chr3A 83.590 195 17 10 2468 2649 530203582 530203390 6.910000e-38 169.0
92 TraesCS7A01G116900 chr6B 82.564 195 19 9 2468 2649 660223329 660223137 1.500000e-34 158.0
93 TraesCS7A01G116900 chr6D 92.405 79 6 0 2465 2543 76077766 76077844 3.290000e-21 113.0
94 TraesCS7A01G116900 chr2D 93.421 76 5 0 2468 2543 142706482 142706557 3.290000e-21 113.0
95 TraesCS7A01G116900 chr2D 93.421 76 5 0 2468 2543 144459782 144459857 3.290000e-21 113.0
96 TraesCS7A01G116900 chr2D 93.421 76 5 0 2468 2543 288992447 288992372 3.290000e-21 113.0
97 TraesCS7A01G116900 chr1D 93.421 76 5 0 2468 2543 408522836 408522761 3.290000e-21 113.0
98 TraesCS7A01G116900 chr4D 92.105 76 6 0 2468 2543 486435318 486435393 1.530000e-19 108.0
99 TraesCS7A01G116900 chr2B 91.429 70 2 3 884 949 135792512 135792581 4.280000e-15 93.5
100 TraesCS7A01G116900 chr2B 91.429 70 2 3 884 949 135794763 135794832 4.280000e-15 93.5
101 TraesCS7A01G116900 chr2B 85.542 83 12 0 2177 2259 796607038 796606956 1.990000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G116900 chr7A 74668000 74672022 4022 False 7430.000000 7430 100.000000 1 4023 1 chr7A.!!$F5 4022
1 TraesCS7A01G116900 chr7A 70804908 70805886 978 True 557.500000 712 87.995000 985 1919 2 chr7A.!!$R5 934
2 TraesCS7A01G116900 chr7A 70778567 70781481 2914 True 381.000000 632 90.952600 2489 4023 5 chr7A.!!$R4 1534
3 TraesCS7A01G116900 chr7A 70450652 70451939 1287 True 324.000000 442 87.307500 1174 2277 2 chr7A.!!$R3 1103
4 TraesCS7A01G116900 chr7A 645737994 645738567 573 True 245.500000 261 83.950000 2499 3031 2 chr7A.!!$R6 532
5 TraesCS7A01G116900 chr7D 66369642 66377637 7995 True 425.712500 1845 88.803125 570 4023 8 chr7D.!!$R1 3453
6 TraesCS7A01G116900 chr7D 66514180 66517106 2926 True 355.000000 388 79.494500 1000 3215 2 chr7D.!!$R2 2215
7 TraesCS7A01G116900 chr7D 69012676 69017959 5283 False 298.472727 859 91.700091 752 4023 11 chr7D.!!$F4 3271
8 TraesCS7A01G116900 chr7B 7557608 7561143 3535 True 380.312500 1149 89.342875 573 3863 8 chr7B.!!$R2 3290
9 TraesCS7A01G116900 chr7B 10580731 10584730 3999 False 301.287500 1147 88.564625 637 3527 8 chr7B.!!$F6 2890
10 TraesCS7A01G116900 chrUn 84524072 84527276 3204 False 226.050000 660 89.515250 1760 4023 8 chrUn.!!$F1 2263
11 TraesCS7A01G116900 chr1A 61235844 61237132 1288 True 317.500000 446 85.198500 1174 2277 2 chr1A.!!$R2 1103
12 TraesCS7A01G116900 chr1A 591448915 591449557 642 False 300.000000 300 76.454000 1988 2664 1 chr1A.!!$F1 676
13 TraesCS7A01G116900 chr2A 84748933 84749594 661 False 260.250000 427 87.010000 884 1469 2 chr2A.!!$F1 585

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
469 470 0.097499 GGTACCGGCGTGCAATTAAC 59.903 55.0 6.01 0.0 0.00 2.01 F
475 476 0.168128 GGCGTGCAATTAACTCGCTT 59.832 50.0 19.80 0.0 46.13 4.68 F
533 534 0.179100 ATCCACAAGCAGGATCGACG 60.179 55.0 0.00 0.0 42.07 5.12 F
1575 3925 0.401738 TCTTGGGAGCAGTTCTTGGG 59.598 55.0 0.00 0.0 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1499 3809 1.132262 GAATTGCTCCCAAATTCGCGA 59.868 47.619 3.71 3.71 34.05 5.87 R
1634 4013 1.140816 GTTGAGTCTCGTTGTCAGGC 58.859 55.000 0.00 0.00 0.00 4.85 R
2099 4981 3.441572 CCCAACAACTAATCAGCTTCAGG 59.558 47.826 0.00 0.00 0.00 3.86 R
3434 6998 0.248702 GCGAGAGACTCTAAAGGGCG 60.249 60.000 4.57 4.82 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
173 174 8.426881 AAACACACACCATTTATTACAAAACC 57.573 30.769 0.00 0.00 0.00 3.27
174 175 7.354751 ACACACACCATTTATTACAAAACCT 57.645 32.000 0.00 0.00 0.00 3.50
175 176 8.466617 ACACACACCATTTATTACAAAACCTA 57.533 30.769 0.00 0.00 0.00 3.08
176 177 9.084533 ACACACACCATTTATTACAAAACCTAT 57.915 29.630 0.00 0.00 0.00 2.57
216 217 8.607441 ATGCAAAAATTAAAGAAAGGAAGACC 57.393 30.769 0.00 0.00 0.00 3.85
217 218 6.989759 TGCAAAAATTAAAGAAAGGAAGACCC 59.010 34.615 0.00 0.00 36.73 4.46
229 230 4.363546 AGGAAGACCCTAAGAATACCCA 57.636 45.455 0.00 0.00 45.48 4.51
230 231 4.706616 AGGAAGACCCTAAGAATACCCAA 58.293 43.478 0.00 0.00 45.48 4.12
231 232 4.722279 AGGAAGACCCTAAGAATACCCAAG 59.278 45.833 0.00 0.00 45.48 3.61
232 233 4.720273 GGAAGACCCTAAGAATACCCAAGA 59.280 45.833 0.00 0.00 0.00 3.02
233 234 5.369993 GGAAGACCCTAAGAATACCCAAGAT 59.630 44.000 0.00 0.00 0.00 2.40
234 235 6.464607 GGAAGACCCTAAGAATACCCAAGATC 60.465 46.154 0.00 0.00 0.00 2.75
235 236 5.793967 AGACCCTAAGAATACCCAAGATCT 58.206 41.667 0.00 0.00 0.00 2.75
236 237 5.604650 AGACCCTAAGAATACCCAAGATCTG 59.395 44.000 0.00 0.00 0.00 2.90
237 238 5.538877 ACCCTAAGAATACCCAAGATCTGA 58.461 41.667 0.00 0.00 0.00 3.27
238 239 5.970640 ACCCTAAGAATACCCAAGATCTGAA 59.029 40.000 0.00 0.00 0.00 3.02
239 240 6.447084 ACCCTAAGAATACCCAAGATCTGAAA 59.553 38.462 0.00 0.00 0.00 2.69
240 241 7.036863 ACCCTAAGAATACCCAAGATCTGAAAA 60.037 37.037 0.00 0.00 0.00 2.29
241 242 7.834181 CCCTAAGAATACCCAAGATCTGAAAAA 59.166 37.037 0.00 0.00 0.00 1.94
242 243 9.413734 CCTAAGAATACCCAAGATCTGAAAAAT 57.586 33.333 0.00 0.00 0.00 1.82
271 272 9.883142 AAAAGATATCCAAAACAAAGAAACACA 57.117 25.926 0.00 0.00 0.00 3.72
275 276 8.964420 ATATCCAAAACAAAGAAACACATACG 57.036 30.769 0.00 0.00 0.00 3.06
276 277 6.438259 TCCAAAACAAAGAAACACATACGA 57.562 33.333 0.00 0.00 0.00 3.43
277 278 6.853720 TCCAAAACAAAGAAACACATACGAA 58.146 32.000 0.00 0.00 0.00 3.85
278 279 6.970043 TCCAAAACAAAGAAACACATACGAAG 59.030 34.615 0.00 0.00 0.00 3.79
279 280 6.970043 CCAAAACAAAGAAACACATACGAAGA 59.030 34.615 0.00 0.00 0.00 2.87
280 281 7.486551 CCAAAACAAAGAAACACATACGAAGAA 59.513 33.333 0.00 0.00 0.00 2.52
281 282 8.855279 CAAAACAAAGAAACACATACGAAGAAA 58.145 29.630 0.00 0.00 0.00 2.52
282 283 7.964545 AACAAAGAAACACATACGAAGAAAC 57.035 32.000 0.00 0.00 0.00 2.78
283 284 7.079182 ACAAAGAAACACATACGAAGAAACA 57.921 32.000 0.00 0.00 0.00 2.83
284 285 7.186804 ACAAAGAAACACATACGAAGAAACAG 58.813 34.615 0.00 0.00 0.00 3.16
285 286 7.065324 ACAAAGAAACACATACGAAGAAACAGA 59.935 33.333 0.00 0.00 0.00 3.41
286 287 7.548196 AAGAAACACATACGAAGAAACAGAA 57.452 32.000 0.00 0.00 0.00 3.02
287 288 6.945072 AGAAACACATACGAAGAAACAGAAC 58.055 36.000 0.00 0.00 0.00 3.01
288 289 6.537301 AGAAACACATACGAAGAAACAGAACA 59.463 34.615 0.00 0.00 0.00 3.18
289 290 5.907197 ACACATACGAAGAAACAGAACAG 57.093 39.130 0.00 0.00 0.00 3.16
290 291 5.357257 ACACATACGAAGAAACAGAACAGT 58.643 37.500 0.00 0.00 0.00 3.55
291 292 5.815740 ACACATACGAAGAAACAGAACAGTT 59.184 36.000 0.00 0.00 0.00 3.16
292 293 6.129393 CACATACGAAGAAACAGAACAGTTG 58.871 40.000 0.00 0.00 0.00 3.16
293 294 6.019075 CACATACGAAGAAACAGAACAGTTGA 60.019 38.462 0.00 0.00 0.00 3.18
294 295 6.537301 ACATACGAAGAAACAGAACAGTTGAA 59.463 34.615 0.00 0.00 0.00 2.69
295 296 5.873179 ACGAAGAAACAGAACAGTTGAAA 57.127 34.783 0.00 0.00 0.00 2.69
296 297 6.249035 ACGAAGAAACAGAACAGTTGAAAA 57.751 33.333 0.00 0.00 0.00 2.29
297 298 6.674066 ACGAAGAAACAGAACAGTTGAAAAA 58.326 32.000 0.00 0.00 0.00 1.94
298 299 6.801862 ACGAAGAAACAGAACAGTTGAAAAAG 59.198 34.615 0.00 0.00 0.00 2.27
299 300 6.251376 CGAAGAAACAGAACAGTTGAAAAAGG 59.749 38.462 0.00 0.00 0.00 3.11
300 301 5.410924 AGAAACAGAACAGTTGAAAAAGGC 58.589 37.500 0.00 0.00 0.00 4.35
301 302 3.801114 ACAGAACAGTTGAAAAAGGCC 57.199 42.857 0.00 0.00 0.00 5.19
302 303 3.096092 ACAGAACAGTTGAAAAAGGCCA 58.904 40.909 5.01 0.00 0.00 5.36
303 304 3.119137 ACAGAACAGTTGAAAAAGGCCAC 60.119 43.478 5.01 0.00 0.00 5.01
304 305 2.099098 AGAACAGTTGAAAAAGGCCACG 59.901 45.455 5.01 0.00 0.00 4.94
305 306 0.744281 ACAGTTGAAAAAGGCCACGG 59.256 50.000 5.01 0.00 0.00 4.94
306 307 0.597377 CAGTTGAAAAAGGCCACGGC 60.597 55.000 5.01 0.00 41.06 5.68
307 308 1.660264 GTTGAAAAAGGCCACGGCG 60.660 57.895 5.01 4.80 43.06 6.46
308 309 2.122167 TTGAAAAAGGCCACGGCGT 61.122 52.632 6.77 6.77 43.06 5.68
309 310 2.050442 GAAAAAGGCCACGGCGTG 60.050 61.111 31.78 31.78 43.06 5.34
310 311 2.831284 AAAAAGGCCACGGCGTGT 60.831 55.556 34.74 17.13 43.06 4.49
311 312 2.726850 GAAAAAGGCCACGGCGTGTC 62.727 60.000 34.74 25.50 43.06 3.67
312 313 3.767630 AAAAGGCCACGGCGTGTCT 62.768 57.895 34.74 27.69 43.06 3.41
313 314 2.386064 AAAAGGCCACGGCGTGTCTA 62.386 55.000 34.74 0.00 43.06 2.59
314 315 2.386064 AAAGGCCACGGCGTGTCTAA 62.386 55.000 34.74 0.00 43.06 2.10
315 316 2.125269 GGCCACGGCGTGTCTAAT 60.125 61.111 34.74 0.00 43.06 1.73
316 317 2.461110 GGCCACGGCGTGTCTAATG 61.461 63.158 34.74 20.98 43.06 1.90
317 318 1.740296 GCCACGGCGTGTCTAATGT 60.740 57.895 34.74 0.00 0.00 2.71
318 319 1.966493 GCCACGGCGTGTCTAATGTG 61.966 60.000 34.74 19.60 0.00 3.21
319 320 1.358725 CCACGGCGTGTCTAATGTGG 61.359 60.000 34.74 15.50 40.68 4.17
320 321 1.079405 ACGGCGTGTCTAATGTGGG 60.079 57.895 13.76 0.00 0.00 4.61
321 322 2.461110 CGGCGTGTCTAATGTGGGC 61.461 63.158 0.00 0.00 0.00 5.36
322 323 1.078426 GGCGTGTCTAATGTGGGCT 60.078 57.895 0.00 0.00 0.00 5.19
323 324 0.177141 GGCGTGTCTAATGTGGGCTA 59.823 55.000 0.00 0.00 0.00 3.93
324 325 1.202651 GGCGTGTCTAATGTGGGCTAT 60.203 52.381 0.00 0.00 0.00 2.97
325 326 2.036733 GGCGTGTCTAATGTGGGCTATA 59.963 50.000 0.00 0.00 0.00 1.31
326 327 3.493699 GGCGTGTCTAATGTGGGCTATAA 60.494 47.826 0.00 0.00 0.00 0.98
327 328 3.493503 GCGTGTCTAATGTGGGCTATAAC 59.506 47.826 0.00 0.00 0.00 1.89
328 329 4.689071 CGTGTCTAATGTGGGCTATAACA 58.311 43.478 0.00 0.00 0.00 2.41
329 330 5.113383 CGTGTCTAATGTGGGCTATAACAA 58.887 41.667 0.00 0.00 0.00 2.83
330 331 5.006358 CGTGTCTAATGTGGGCTATAACAAC 59.994 44.000 0.00 0.00 0.00 3.32
331 332 5.878116 GTGTCTAATGTGGGCTATAACAACA 59.122 40.000 0.00 0.00 0.00 3.33
332 333 5.878116 TGTCTAATGTGGGCTATAACAACAC 59.122 40.000 0.00 0.00 0.00 3.32
333 334 5.006358 GTCTAATGTGGGCTATAACAACACG 59.994 44.000 0.00 0.00 34.93 4.49
334 335 3.620427 ATGTGGGCTATAACAACACGA 57.380 42.857 0.00 0.00 34.93 4.35
335 336 3.404224 TGTGGGCTATAACAACACGAA 57.596 42.857 0.00 0.00 34.93 3.85
336 337 3.741249 TGTGGGCTATAACAACACGAAA 58.259 40.909 0.00 0.00 34.93 3.46
337 338 4.135306 TGTGGGCTATAACAACACGAAAA 58.865 39.130 0.00 0.00 34.93 2.29
338 339 4.023878 TGTGGGCTATAACAACACGAAAAC 60.024 41.667 0.00 0.00 34.93 2.43
339 340 3.502979 TGGGCTATAACAACACGAAAACC 59.497 43.478 0.00 0.00 0.00 3.27
340 341 3.754850 GGGCTATAACAACACGAAAACCT 59.245 43.478 0.00 0.00 0.00 3.50
341 342 4.142752 GGGCTATAACAACACGAAAACCTC 60.143 45.833 0.00 0.00 0.00 3.85
342 343 4.694037 GGCTATAACAACACGAAAACCTCT 59.306 41.667 0.00 0.00 0.00 3.69
343 344 5.870978 GGCTATAACAACACGAAAACCTCTA 59.129 40.000 0.00 0.00 0.00 2.43
344 345 6.183360 GGCTATAACAACACGAAAACCTCTAC 60.183 42.308 0.00 0.00 0.00 2.59
345 346 6.589139 GCTATAACAACACGAAAACCTCTACT 59.411 38.462 0.00 0.00 0.00 2.57
346 347 7.117379 GCTATAACAACACGAAAACCTCTACTT 59.883 37.037 0.00 0.00 0.00 2.24
347 348 5.479716 AACAACACGAAAACCTCTACTTG 57.520 39.130 0.00 0.00 0.00 3.16
348 349 3.875134 ACAACACGAAAACCTCTACTTGG 59.125 43.478 0.00 0.00 0.00 3.61
349 350 4.124238 CAACACGAAAACCTCTACTTGGA 58.876 43.478 0.00 0.00 0.00 3.53
350 351 3.991367 ACACGAAAACCTCTACTTGGAG 58.009 45.455 0.00 0.00 0.00 3.86
351 352 3.640029 ACACGAAAACCTCTACTTGGAGA 59.360 43.478 0.00 0.00 35.52 3.71
352 353 3.988517 CACGAAAACCTCTACTTGGAGAC 59.011 47.826 0.00 0.00 35.52 3.36
353 354 3.640029 ACGAAAACCTCTACTTGGAGACA 59.360 43.478 0.00 0.00 35.52 3.41
354 355 4.283722 ACGAAAACCTCTACTTGGAGACAT 59.716 41.667 0.00 0.00 42.32 3.06
355 356 4.627467 CGAAAACCTCTACTTGGAGACATG 59.373 45.833 0.00 0.00 42.32 3.21
356 357 3.618690 AACCTCTACTTGGAGACATGC 57.381 47.619 0.00 0.00 42.32 4.06
357 358 2.540383 ACCTCTACTTGGAGACATGCA 58.460 47.619 0.00 0.00 42.32 3.96
358 359 3.110705 ACCTCTACTTGGAGACATGCAT 58.889 45.455 0.00 0.00 42.32 3.96
359 360 3.521126 ACCTCTACTTGGAGACATGCATT 59.479 43.478 0.00 0.00 42.32 3.56
360 361 4.018960 ACCTCTACTTGGAGACATGCATTT 60.019 41.667 0.00 0.00 42.32 2.32
361 362 4.946157 CCTCTACTTGGAGACATGCATTTT 59.054 41.667 0.00 0.00 42.32 1.82
362 363 5.416952 CCTCTACTTGGAGACATGCATTTTT 59.583 40.000 0.00 0.00 42.32 1.94
363 364 6.258230 TCTACTTGGAGACATGCATTTTTG 57.742 37.500 0.00 0.00 42.32 2.44
364 365 4.942761 ACTTGGAGACATGCATTTTTGT 57.057 36.364 0.00 0.00 42.32 2.83
365 366 6.939730 TCTACTTGGAGACATGCATTTTTGTA 59.060 34.615 0.00 0.00 42.32 2.41
366 367 6.017400 ACTTGGAGACATGCATTTTTGTAG 57.983 37.500 0.00 0.00 42.32 2.74
367 368 4.439305 TGGAGACATGCATTTTTGTAGC 57.561 40.909 0.00 0.00 33.40 3.58
368 369 3.825585 TGGAGACATGCATTTTTGTAGCA 59.174 39.130 0.00 0.00 43.14 3.49
370 371 5.651576 TGGAGACATGCATTTTTGTAGCATA 59.348 36.000 0.00 0.00 46.39 3.14
371 372 6.321945 TGGAGACATGCATTTTTGTAGCATAT 59.678 34.615 0.00 0.00 46.39 1.78
372 373 7.147863 TGGAGACATGCATTTTTGTAGCATATT 60.148 33.333 0.00 0.00 46.39 1.28
373 374 7.168637 GGAGACATGCATTTTTGTAGCATATTG 59.831 37.037 0.00 0.00 46.39 1.90
374 375 6.982141 AGACATGCATTTTTGTAGCATATTGG 59.018 34.615 0.00 0.00 46.39 3.16
375 376 6.642430 ACATGCATTTTTGTAGCATATTGGT 58.358 32.000 0.00 0.00 46.39 3.67
376 377 6.757947 ACATGCATTTTTGTAGCATATTGGTC 59.242 34.615 0.00 0.00 46.39 4.02
377 378 5.339177 TGCATTTTTGTAGCATATTGGTCG 58.661 37.500 0.00 0.00 32.55 4.79
378 379 5.105957 TGCATTTTTGTAGCATATTGGTCGT 60.106 36.000 0.00 0.00 32.55 4.34
379 380 5.229887 GCATTTTTGTAGCATATTGGTCGTG 59.770 40.000 0.00 0.00 0.00 4.35
380 381 4.349663 TTTTGTAGCATATTGGTCGTGC 57.650 40.909 0.00 0.00 39.10 5.34
381 382 1.948104 TGTAGCATATTGGTCGTGCC 58.052 50.000 0.00 0.00 39.62 5.01
382 383 1.226746 GTAGCATATTGGTCGTGCCC 58.773 55.000 0.00 0.00 39.62 5.36
383 384 1.128200 TAGCATATTGGTCGTGCCCT 58.872 50.000 0.00 0.00 39.62 5.19
384 385 1.128200 AGCATATTGGTCGTGCCCTA 58.872 50.000 0.00 0.00 39.62 3.53
385 386 1.488812 AGCATATTGGTCGTGCCCTAA 59.511 47.619 0.00 0.00 39.62 2.69
386 387 2.092646 AGCATATTGGTCGTGCCCTAAA 60.093 45.455 0.00 0.00 39.62 1.85
387 388 2.032924 GCATATTGGTCGTGCCCTAAAC 59.967 50.000 0.00 0.00 36.04 2.01
388 389 3.541632 CATATTGGTCGTGCCCTAAACT 58.458 45.455 0.00 0.00 36.04 2.66
389 390 2.579410 ATTGGTCGTGCCCTAAACTT 57.421 45.000 0.00 0.00 36.04 2.66
390 391 1.886886 TTGGTCGTGCCCTAAACTTC 58.113 50.000 0.00 0.00 36.04 3.01
391 392 0.759959 TGGTCGTGCCCTAAACTTCA 59.240 50.000 0.00 0.00 36.04 3.02
392 393 1.349688 TGGTCGTGCCCTAAACTTCAT 59.650 47.619 0.00 0.00 36.04 2.57
393 394 2.568062 TGGTCGTGCCCTAAACTTCATA 59.432 45.455 0.00 0.00 36.04 2.15
394 395 2.934553 GGTCGTGCCCTAAACTTCATAC 59.065 50.000 0.00 0.00 0.00 2.39
395 396 3.369157 GGTCGTGCCCTAAACTTCATACT 60.369 47.826 0.00 0.00 0.00 2.12
396 397 4.142093 GGTCGTGCCCTAAACTTCATACTA 60.142 45.833 0.00 0.00 0.00 1.82
397 398 5.413499 GTCGTGCCCTAAACTTCATACTAA 58.587 41.667 0.00 0.00 0.00 2.24
398 399 5.290400 GTCGTGCCCTAAACTTCATACTAAC 59.710 44.000 0.00 0.00 0.00 2.34
399 400 5.186409 TCGTGCCCTAAACTTCATACTAACT 59.814 40.000 0.00 0.00 0.00 2.24
400 401 5.873164 CGTGCCCTAAACTTCATACTAACTT 59.127 40.000 0.00 0.00 0.00 2.66
401 402 6.183360 CGTGCCCTAAACTTCATACTAACTTG 60.183 42.308 0.00 0.00 0.00 3.16
402 403 6.653740 GTGCCCTAAACTTCATACTAACTTGT 59.346 38.462 0.00 0.00 0.00 3.16
403 404 7.820872 GTGCCCTAAACTTCATACTAACTTGTA 59.179 37.037 0.00 0.00 0.00 2.41
404 405 8.377034 TGCCCTAAACTTCATACTAACTTGTAA 58.623 33.333 0.00 0.00 0.00 2.41
405 406 9.223099 GCCCTAAACTTCATACTAACTTGTAAA 57.777 33.333 0.00 0.00 0.00 2.01
430 431 7.988904 TTGTTTTTAAAGTGGTACCAATTCG 57.011 32.000 26.51 0.00 32.85 3.34
431 432 7.098074 TGTTTTTAAAGTGGTACCAATTCGT 57.902 32.000 26.51 15.28 32.85 3.85
432 433 7.545489 TGTTTTTAAAGTGGTACCAATTCGTT 58.455 30.769 26.51 14.58 32.85 3.85
433 434 7.488471 TGTTTTTAAAGTGGTACCAATTCGTTG 59.512 33.333 26.51 0.00 32.85 4.10
434 435 6.939132 TTTAAAGTGGTACCAATTCGTTGA 57.061 33.333 26.51 6.83 32.85 3.18
435 436 6.939132 TTAAAGTGGTACCAATTCGTTGAA 57.061 33.333 26.51 13.31 32.85 2.69
436 437 5.838531 AAAGTGGTACCAATTCGTTGAAA 57.161 34.783 26.51 0.00 32.85 2.69
437 438 4.823790 AGTGGTACCAATTCGTTGAAAC 57.176 40.909 18.31 0.00 0.00 2.78
438 439 4.457466 AGTGGTACCAATTCGTTGAAACT 58.543 39.130 18.31 1.40 0.00 2.66
439 440 4.274950 AGTGGTACCAATTCGTTGAAACTG 59.725 41.667 18.31 0.00 0.00 3.16
440 441 4.035909 GTGGTACCAATTCGTTGAAACTGT 59.964 41.667 18.31 0.00 0.00 3.55
441 442 4.273969 TGGTACCAATTCGTTGAAACTGTC 59.726 41.667 13.60 0.00 0.00 3.51
442 443 3.982576 ACCAATTCGTTGAAACTGTCC 57.017 42.857 0.00 0.00 0.00 4.02
443 444 3.551846 ACCAATTCGTTGAAACTGTCCT 58.448 40.909 0.00 0.00 0.00 3.85
444 445 4.710324 ACCAATTCGTTGAAACTGTCCTA 58.290 39.130 0.00 0.00 0.00 2.94
445 446 5.127491 ACCAATTCGTTGAAACTGTCCTAA 58.873 37.500 0.00 0.00 0.00 2.69
446 447 5.768164 ACCAATTCGTTGAAACTGTCCTAAT 59.232 36.000 0.00 0.00 0.00 1.73
447 448 6.264518 ACCAATTCGTTGAAACTGTCCTAATT 59.735 34.615 0.00 0.00 0.00 1.40
448 449 6.582295 CCAATTCGTTGAAACTGTCCTAATTG 59.418 38.462 0.00 0.00 33.64 2.32
449 450 6.877611 ATTCGTTGAAACTGTCCTAATTGT 57.122 33.333 0.00 0.00 0.00 2.71
450 451 5.666969 TCGTTGAAACTGTCCTAATTGTG 57.333 39.130 0.00 0.00 0.00 3.33
451 452 4.513692 TCGTTGAAACTGTCCTAATTGTGG 59.486 41.667 0.00 0.00 0.00 4.17
452 453 4.274950 CGTTGAAACTGTCCTAATTGTGGT 59.725 41.667 0.00 0.00 0.00 4.16
453 454 5.467399 CGTTGAAACTGTCCTAATTGTGGTA 59.533 40.000 0.00 0.00 0.00 3.25
454 455 6.565247 CGTTGAAACTGTCCTAATTGTGGTAC 60.565 42.308 0.00 0.00 0.00 3.34
455 456 5.310451 TGAAACTGTCCTAATTGTGGTACC 58.690 41.667 4.43 4.43 0.00 3.34
456 457 3.604875 ACTGTCCTAATTGTGGTACCG 57.395 47.619 7.57 0.00 0.00 4.02
457 458 2.235402 ACTGTCCTAATTGTGGTACCGG 59.765 50.000 7.57 0.00 0.00 5.28
458 459 1.065998 TGTCCTAATTGTGGTACCGGC 60.066 52.381 7.57 3.24 0.00 6.13
459 460 0.176219 TCCTAATTGTGGTACCGGCG 59.824 55.000 7.57 0.00 0.00 6.46
460 461 0.108041 CCTAATTGTGGTACCGGCGT 60.108 55.000 7.57 0.00 0.00 5.68
461 462 1.003851 CTAATTGTGGTACCGGCGTG 58.996 55.000 7.57 0.00 0.00 5.34
462 463 1.020333 TAATTGTGGTACCGGCGTGC 61.020 55.000 7.57 0.00 0.00 5.34
463 464 3.538785 ATTGTGGTACCGGCGTGCA 62.539 57.895 7.57 0.00 0.00 4.57
464 465 3.752088 TTGTGGTACCGGCGTGCAA 62.752 57.895 7.57 0.00 0.00 4.08
465 466 2.744709 GTGGTACCGGCGTGCAAT 60.745 61.111 7.57 0.00 0.00 3.56
466 467 2.032834 TGGTACCGGCGTGCAATT 59.967 55.556 7.57 0.00 0.00 2.32
467 468 1.020333 GTGGTACCGGCGTGCAATTA 61.020 55.000 7.57 0.00 0.00 1.40
468 469 0.321387 TGGTACCGGCGTGCAATTAA 60.321 50.000 7.57 0.00 0.00 1.40
469 470 0.097499 GGTACCGGCGTGCAATTAAC 59.903 55.000 6.01 0.00 0.00 2.01
470 471 1.081094 GTACCGGCGTGCAATTAACT 58.919 50.000 6.01 0.00 0.00 2.24
471 472 1.061566 GTACCGGCGTGCAATTAACTC 59.938 52.381 6.01 0.00 0.00 3.01
472 473 1.060308 CCGGCGTGCAATTAACTCG 59.940 57.895 6.01 0.00 0.00 4.18
473 474 1.580132 CGGCGTGCAATTAACTCGC 60.580 57.895 15.00 15.00 46.16 5.03
474 475 1.794222 GGCGTGCAATTAACTCGCT 59.206 52.632 19.80 0.00 46.13 4.93
475 476 0.168128 GGCGTGCAATTAACTCGCTT 59.832 50.000 19.80 0.00 46.13 4.68
476 477 1.395608 GGCGTGCAATTAACTCGCTTA 59.604 47.619 19.80 0.00 46.13 3.09
477 478 2.159626 GGCGTGCAATTAACTCGCTTAA 60.160 45.455 19.80 0.00 46.13 1.85
478 479 3.486875 GGCGTGCAATTAACTCGCTTAAT 60.487 43.478 19.80 0.00 46.13 1.40
479 480 3.478516 GCGTGCAATTAACTCGCTTAATG 59.521 43.478 15.69 0.00 44.21 1.90
480 481 4.028383 CGTGCAATTAACTCGCTTAATGG 58.972 43.478 0.00 0.00 35.55 3.16
481 482 4.201773 CGTGCAATTAACTCGCTTAATGGA 60.202 41.667 0.00 0.00 35.55 3.41
482 483 5.266242 GTGCAATTAACTCGCTTAATGGAG 58.734 41.667 0.00 2.33 35.55 3.86
483 484 4.335315 TGCAATTAACTCGCTTAATGGAGG 59.665 41.667 7.56 0.00 35.55 4.30
484 485 4.789802 GCAATTAACTCGCTTAATGGAGGC 60.790 45.833 7.56 0.00 35.55 4.70
485 486 3.620427 TTAACTCGCTTAATGGAGGCA 57.380 42.857 7.56 0.00 34.58 4.75
486 487 2.489938 AACTCGCTTAATGGAGGCAA 57.510 45.000 7.56 0.00 34.58 4.52
487 488 1.739067 ACTCGCTTAATGGAGGCAAC 58.261 50.000 7.56 0.00 34.58 4.17
488 489 5.861778 ATTAACTCGCTTAATGGAGGCAACT 60.862 40.000 7.56 0.00 40.90 3.16
489 490 7.302680 ATTAACTCGCTTAATGGAGGCAACTT 61.303 38.462 7.56 0.00 39.36 2.66
490 491 9.013937 ATTAACTCGCTTAATGGAGGCAACTTC 62.014 40.741 7.56 0.00 45.44 3.01
503 504 3.142174 GGCAACTTCTATGATGGCTACC 58.858 50.000 0.00 0.00 35.66 3.18
504 505 3.433598 GGCAACTTCTATGATGGCTACCA 60.434 47.826 0.00 0.00 38.19 3.25
505 506 3.812053 GCAACTTCTATGATGGCTACCAG 59.188 47.826 0.00 0.00 36.75 4.00
506 507 3.760580 ACTTCTATGATGGCTACCAGC 57.239 47.619 0.00 0.00 40.77 4.85
517 518 0.682292 GCTACCAGCCCTCAGTATCC 59.318 60.000 0.00 0.00 34.48 2.59
518 519 2.034799 GCTACCAGCCCTCAGTATCCA 61.035 57.143 0.00 0.00 34.48 3.41
519 520 1.689273 CTACCAGCCCTCAGTATCCAC 59.311 57.143 0.00 0.00 0.00 4.02
520 521 0.252696 ACCAGCCCTCAGTATCCACA 60.253 55.000 0.00 0.00 0.00 4.17
521 522 0.911769 CCAGCCCTCAGTATCCACAA 59.088 55.000 0.00 0.00 0.00 3.33
522 523 1.134280 CCAGCCCTCAGTATCCACAAG 60.134 57.143 0.00 0.00 0.00 3.16
523 524 0.543749 AGCCCTCAGTATCCACAAGC 59.456 55.000 0.00 0.00 0.00 4.01
524 525 0.253044 GCCCTCAGTATCCACAAGCA 59.747 55.000 0.00 0.00 0.00 3.91
525 526 1.745141 GCCCTCAGTATCCACAAGCAG 60.745 57.143 0.00 0.00 0.00 4.24
526 527 1.134280 CCCTCAGTATCCACAAGCAGG 60.134 57.143 0.00 0.00 0.00 4.85
527 528 1.833630 CCTCAGTATCCACAAGCAGGA 59.166 52.381 0.00 0.00 39.97 3.86
529 530 3.494048 CCTCAGTATCCACAAGCAGGATC 60.494 52.174 0.00 0.00 44.54 3.36
530 531 2.101415 TCAGTATCCACAAGCAGGATCG 59.899 50.000 0.00 0.00 44.54 3.69
531 532 2.101415 CAGTATCCACAAGCAGGATCGA 59.899 50.000 0.00 0.00 44.54 3.59
532 533 2.101582 AGTATCCACAAGCAGGATCGAC 59.898 50.000 0.00 0.00 44.54 4.20
533 534 0.179100 ATCCACAAGCAGGATCGACG 60.179 55.000 0.00 0.00 42.07 5.12
534 535 2.456119 CCACAAGCAGGATCGACGC 61.456 63.158 0.00 0.00 0.00 5.19
535 536 1.446792 CACAAGCAGGATCGACGCT 60.447 57.895 0.00 0.00 37.68 5.07
536 537 1.153745 ACAAGCAGGATCGACGCTC 60.154 57.895 3.01 0.00 34.11 5.03
537 538 1.880340 CAAGCAGGATCGACGCTCC 60.880 63.158 9.74 9.74 34.11 4.70
538 539 2.351244 AAGCAGGATCGACGCTCCA 61.351 57.895 19.19 0.00 34.11 3.86
539 540 1.680522 AAGCAGGATCGACGCTCCAT 61.681 55.000 19.19 2.76 34.11 3.41
540 541 1.953138 GCAGGATCGACGCTCCATG 60.953 63.158 19.19 14.36 35.08 3.66
541 542 1.300465 CAGGATCGACGCTCCATGG 60.300 63.158 19.19 4.97 35.08 3.66
542 543 2.663188 GGATCGACGCTCCATGGC 60.663 66.667 12.74 0.00 32.72 4.40
543 544 2.663188 GATCGACGCTCCATGGCC 60.663 66.667 6.96 0.00 0.00 5.36
544 545 4.241555 ATCGACGCTCCATGGCCC 62.242 66.667 6.96 0.00 0.00 5.80
546 547 4.776322 CGACGCTCCATGGCCCAA 62.776 66.667 6.96 0.00 0.00 4.12
547 548 2.361104 GACGCTCCATGGCCCAAA 60.361 61.111 6.96 0.00 0.00 3.28
548 549 2.361610 ACGCTCCATGGCCCAAAG 60.362 61.111 6.96 0.00 0.00 2.77
549 550 3.830192 CGCTCCATGGCCCAAAGC 61.830 66.667 6.96 9.70 42.60 3.51
550 551 3.830192 GCTCCATGGCCCAAAGCG 61.830 66.667 6.96 0.00 45.17 4.68
551 552 2.045045 CTCCATGGCCCAAAGCGA 60.045 61.111 6.96 0.00 45.17 4.93
552 553 2.045045 TCCATGGCCCAAAGCGAG 60.045 61.111 6.96 0.00 45.17 5.03
553 554 2.045045 CCATGGCCCAAAGCGAGA 60.045 61.111 0.00 0.00 45.17 4.04
554 555 2.117156 CCATGGCCCAAAGCGAGAG 61.117 63.158 0.00 0.00 45.17 3.20
555 556 2.117156 CATGGCCCAAAGCGAGAGG 61.117 63.158 0.00 0.00 45.17 3.69
556 557 3.350031 ATGGCCCAAAGCGAGAGGG 62.350 63.158 0.00 0.00 45.17 4.30
559 560 2.437359 CCCAAAGCGAGAGGGCAG 60.437 66.667 0.00 0.00 35.44 4.85
560 561 3.130160 CCAAAGCGAGAGGGCAGC 61.130 66.667 0.00 0.00 34.64 5.25
561 562 2.046507 CAAAGCGAGAGGGCAGCT 60.047 61.111 0.00 0.00 43.90 4.24
562 563 2.105466 CAAAGCGAGAGGGCAGCTC 61.105 63.158 0.00 0.00 40.78 4.09
567 568 3.134792 GAGAGGGCAGCTCGTCGA 61.135 66.667 0.00 0.00 0.00 4.20
568 569 3.404141 GAGAGGGCAGCTCGTCGAC 62.404 68.421 5.18 5.18 0.00 4.20
596 597 5.841957 ATGCTATGATTTCCAGTGGTTTC 57.158 39.130 9.54 5.51 0.00 2.78
605 606 3.943671 TCCAGTGGTTTCCAAAGAAGA 57.056 42.857 9.54 0.00 34.18 2.87
606 607 4.453480 TCCAGTGGTTTCCAAAGAAGAT 57.547 40.909 9.54 0.00 34.18 2.40
610 611 4.994852 CAGTGGTTTCCAAAGAAGATACGA 59.005 41.667 0.00 0.00 34.18 3.43
617 618 7.698130 GGTTTCCAAAGAAGATACGATTTCATG 59.302 37.037 0.00 0.00 32.35 3.07
627 628 7.470289 AGATACGATTTCATGTTTAGTCAGC 57.530 36.000 0.00 0.00 0.00 4.26
629 630 5.940192 ACGATTTCATGTTTAGTCAGCAA 57.060 34.783 0.00 0.00 0.00 3.91
632 633 6.149308 ACGATTTCATGTTTAGTCAGCAATCA 59.851 34.615 0.00 0.00 0.00 2.57
634 635 6.631971 TTTCATGTTTAGTCAGCAATCACA 57.368 33.333 0.00 0.00 0.00 3.58
635 636 6.631971 TTCATGTTTAGTCAGCAATCACAA 57.368 33.333 0.00 0.00 0.00 3.33
733 1967 5.944013 TCATTTTGTATCAAATTCGGCGAA 58.056 33.333 25.88 25.88 0.00 4.70
736 1970 5.365403 TTTGTATCAAATTCGGCGAAGTT 57.635 34.783 27.10 27.10 29.77 2.66
737 1971 5.365403 TTGTATCAAATTCGGCGAAGTTT 57.635 34.783 29.65 22.86 27.08 2.66
738 1972 4.717991 TGTATCAAATTCGGCGAAGTTTG 58.282 39.130 29.65 29.89 27.08 2.93
739 1973 4.452795 TGTATCAAATTCGGCGAAGTTTGA 59.547 37.500 34.50 34.50 42.61 2.69
800 2050 4.090090 TGTTTTGGGAAGGAAACAAGTCA 58.910 39.130 0.00 0.00 32.86 3.41
909 3091 4.733725 TACTCCCCCGCCTTGGCT 62.734 66.667 10.12 0.00 35.87 4.75
968 3165 1.741770 CCGGAGCTCCAAGAAACCG 60.742 63.158 31.67 15.88 40.03 4.44
1030 3282 2.842462 AGGACAGCCACCACGTGA 60.842 61.111 19.30 0.00 35.23 4.35
1060 3312 2.813474 GCGAGCACGGCATGTACA 60.813 61.111 5.52 0.00 40.15 2.90
1499 3809 5.619981 CGCTTCTTGATTCTTCCCGATTTTT 60.620 40.000 0.00 0.00 0.00 1.94
1575 3925 0.401738 TCTTGGGAGCAGTTCTTGGG 59.598 55.000 0.00 0.00 0.00 4.12
1634 4013 1.388888 CAACTTCGCGTTTCTTGCAG 58.611 50.000 5.77 0.00 32.27 4.41
1842 4246 3.188786 GCGACCTCGTCATGTGCC 61.189 66.667 0.00 0.00 42.22 5.01
1843 4247 2.880879 CGACCTCGTCATGTGCCG 60.881 66.667 0.00 0.00 32.09 5.69
1844 4248 2.571757 GACCTCGTCATGTGCCGA 59.428 61.111 0.00 0.00 32.09 5.54
1845 4249 1.141881 GACCTCGTCATGTGCCGAT 59.858 57.895 5.60 0.00 32.09 4.18
1846 4250 1.148157 GACCTCGTCATGTGCCGATG 61.148 60.000 5.60 5.90 32.09 3.84
1847 4251 1.153568 CCTCGTCATGTGCCGATGT 60.154 57.895 5.60 0.00 31.90 3.06
1848 4252 1.423721 CCTCGTCATGTGCCGATGTG 61.424 60.000 5.60 0.00 31.90 3.21
1849 4253 2.028766 CTCGTCATGTGCCGATGTGC 62.029 60.000 5.60 0.00 31.90 4.57
2064 4946 5.699839 AGTTTGTCTGAACTGTTGTGTTTC 58.300 37.500 0.00 0.00 38.39 2.78
2071 4953 9.283768 TGTCTGAACTGTTGTGTTTCATATAAT 57.716 29.630 0.00 0.00 0.00 1.28
2099 4981 4.938226 AGTAGTTGAATGCTAGAAAGTGGC 59.062 41.667 0.00 0.00 0.00 5.01
2108 4990 2.354259 CTAGAAAGTGGCCTGAAGCTG 58.646 52.381 3.32 0.00 43.05 4.24
2159 5045 4.655963 ACACATATTCACACTCAGCCTTT 58.344 39.130 0.00 0.00 0.00 3.11
2213 5117 7.288672 CAGTTCTTCAATTTAACCTACACGTC 58.711 38.462 0.00 0.00 0.00 4.34
2219 5123 6.446318 TCAATTTAACCTACACGTCGTTAGT 58.554 36.000 0.00 0.00 0.00 2.24
2296 5238 6.425114 GCTTTACAGAGAAGACACTGATTTCA 59.575 38.462 0.00 0.00 37.95 2.69
2306 5274 9.305925 AGAAGACACTGATTTCAAATTGTTTTC 57.694 29.630 7.94 7.94 31.58 2.29
2357 5325 1.537202 CCCACAGCACTACTTGAAAGC 59.463 52.381 0.00 0.00 0.00 3.51
2358 5326 2.498167 CCACAGCACTACTTGAAAGCT 58.502 47.619 0.00 0.00 35.63 3.74
2359 5327 3.557054 CCCACAGCACTACTTGAAAGCTA 60.557 47.826 0.00 0.00 33.59 3.32
2360 5328 3.681897 CCACAGCACTACTTGAAAGCTAG 59.318 47.826 0.00 0.00 33.59 3.42
2361 5329 3.124297 CACAGCACTACTTGAAAGCTAGC 59.876 47.826 6.62 6.62 33.59 3.42
2362 5330 3.007398 ACAGCACTACTTGAAAGCTAGCT 59.993 43.478 12.68 12.68 33.59 3.32
2363 5331 3.999663 CAGCACTACTTGAAAGCTAGCTT 59.000 43.478 24.42 24.42 37.98 3.74
2364 5332 4.092675 CAGCACTACTTGAAAGCTAGCTTC 59.907 45.833 29.42 21.44 34.84 3.86
2365 5333 4.020662 AGCACTACTTGAAAGCTAGCTTCT 60.021 41.667 29.42 19.00 34.84 2.85
2368 5336 4.693095 ACTACTTGAAAGCTAGCTTCTTGC 59.307 41.667 29.42 18.56 43.29 4.01
2373 5341 6.376581 ACTTGAAAGCTAGCTTCTTGCAATAT 59.623 34.615 29.42 17.17 45.94 1.28
2402 5370 4.085357 TCAGGTTTTGTACATCAGCTGT 57.915 40.909 23.27 0.00 42.13 4.40
2416 5384 6.586344 ACATCAGCTGTACATATAGCAAAGT 58.414 36.000 14.67 1.29 42.10 2.66
2418 5386 7.225538 ACATCAGCTGTACATATAGCAAAGTTC 59.774 37.037 14.67 0.00 42.10 3.01
2419 5387 6.878317 TCAGCTGTACATATAGCAAAGTTCT 58.122 36.000 14.67 0.00 42.10 3.01
2420 5388 6.758416 TCAGCTGTACATATAGCAAAGTTCTG 59.242 38.462 14.67 0.00 42.10 3.02
2421 5389 6.758416 CAGCTGTACATATAGCAAAGTTCTGA 59.242 38.462 5.25 0.00 42.10 3.27
2423 5391 6.980978 GCTGTACATATAGCAAAGTTCTGAGA 59.019 38.462 0.00 0.00 39.80 3.27
2733 5805 6.704937 GGAACTTATAAACCCTAATCGGTCAG 59.295 42.308 0.00 0.00 33.98 3.51
2736 5808 8.716674 ACTTATAAACCCTAATCGGTCAGATA 57.283 34.615 0.00 0.00 38.98 1.98
2935 6075 4.534500 TCCAGTGGTTGTATTACCTGTGAT 59.466 41.667 9.54 0.00 39.04 3.06
2937 6077 5.815740 CCAGTGGTTGTATTACCTGTGATAC 59.184 44.000 0.00 5.52 39.04 2.24
2938 6078 5.815740 CAGTGGTTGTATTACCTGTGATACC 59.184 44.000 9.03 0.00 39.04 2.73
2939 6079 5.104652 AGTGGTTGTATTACCTGTGATACCC 60.105 44.000 9.03 5.57 39.04 3.69
2940 6080 4.141892 TGGTTGTATTACCTGTGATACCCG 60.142 45.833 9.03 0.00 39.04 5.28
2964 6104 2.037772 TGCCTGACTTCCTCACTTTCTC 59.962 50.000 0.00 0.00 0.00 2.87
3000 6144 2.816958 CGAGCTGCGCCAGATGTT 60.817 61.111 4.18 0.00 32.44 2.71
3052 6210 2.181021 CTACCGTCGCCCTGTCAC 59.819 66.667 0.00 0.00 0.00 3.67
3053 6211 2.282674 TACCGTCGCCCTGTCACT 60.283 61.111 0.00 0.00 0.00 3.41
3054 6212 2.543687 CTACCGTCGCCCTGTCACTG 62.544 65.000 0.00 0.00 0.00 3.66
3055 6213 3.991051 CCGTCGCCCTGTCACTGT 61.991 66.667 0.00 0.00 0.00 3.55
3056 6214 2.430921 CGTCGCCCTGTCACTGTC 60.431 66.667 0.00 0.00 0.00 3.51
3057 6215 2.734591 GTCGCCCTGTCACTGTCA 59.265 61.111 0.00 0.00 0.00 3.58
3058 6216 1.293498 GTCGCCCTGTCACTGTCAT 59.707 57.895 0.00 0.00 0.00 3.06
3081 6267 1.000283 CACCTCTTCAGAAGTGTCGCT 60.000 52.381 10.09 0.00 33.12 4.93
3092 6278 1.672356 GTGTCGCTGCCTTGGACAT 60.672 57.895 10.49 0.00 42.10 3.06
3194 6380 6.262720 GCTAGCTGAAATTGATTCATTCTCCT 59.737 38.462 7.70 2.00 46.62 3.69
3269 6662 3.058293 TGGTTCTTGCAGTTAATTGAGCG 60.058 43.478 1.56 0.00 0.00 5.03
3328 6850 4.823442 TGACAGAGTTCTGAACATGCATTT 59.177 37.500 21.50 5.14 46.59 2.32
3416 6980 5.412594 ACACCGTACGAATACTAGTTTCTGA 59.587 40.000 18.76 0.00 0.00 3.27
3434 6998 9.736023 AGTTTCTGAAAATTACATTGTTCTCAC 57.264 29.630 4.09 0.00 0.00 3.51
3457 7077 3.547746 CCCTTTAGAGTCTCTCGCTACT 58.452 50.000 5.39 0.00 35.36 2.57
3470 7090 6.470877 GTCTCTCGCTACTCTTCTTGTAATTG 59.529 42.308 0.00 0.00 0.00 2.32
3660 10914 3.627577 GTGGGATTCGCATGAACAGTATT 59.372 43.478 6.70 0.00 36.81 1.89
3661 10915 4.096382 GTGGGATTCGCATGAACAGTATTT 59.904 41.667 6.70 0.00 36.81 1.40
3676 10934 5.848406 ACAGTATTTATCAGCTAGCTGTCC 58.152 41.667 36.99 20.24 43.96 4.02
3687 10945 2.099263 GCTAGCTGTCCTCGATGTGTTA 59.901 50.000 7.70 0.00 0.00 2.41
3703 10961 2.347452 GTGTTATGGAACCATCACGTCG 59.653 50.000 9.75 0.00 37.82 5.12
3737 10995 0.995024 AGGTAAAGGTGCATGCCTCT 59.005 50.000 16.68 9.70 38.03 3.69
3738 10996 1.098050 GGTAAAGGTGCATGCCTCTG 58.902 55.000 16.68 0.00 38.03 3.35
3806 11075 7.877612 AGAAAGAGAATGAGAGAGAAGAAAACC 59.122 37.037 0.00 0.00 0.00 3.27
3922 11193 8.215050 ACAACAATAATAATCCAATCCCGTCTA 58.785 33.333 0.00 0.00 0.00 2.59
3932 11203 4.881273 TCCAATCCCGTCTACATTCAAATG 59.119 41.667 1.20 1.20 42.10 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
147 148 8.884726 GGTTTTGTAATAAATGGTGTGTGTTTT 58.115 29.630 0.00 0.00 0.00 2.43
148 149 8.261522 AGGTTTTGTAATAAATGGTGTGTGTTT 58.738 29.630 0.00 0.00 0.00 2.83
149 150 7.787028 AGGTTTTGTAATAAATGGTGTGTGTT 58.213 30.769 0.00 0.00 0.00 3.32
150 151 7.354751 AGGTTTTGTAATAAATGGTGTGTGT 57.645 32.000 0.00 0.00 0.00 3.72
190 191 9.056005 GGTCTTCCTTTCTTTAATTTTTGCATT 57.944 29.630 0.00 0.00 0.00 3.56
191 192 7.661437 GGGTCTTCCTTTCTTTAATTTTTGCAT 59.339 33.333 0.00 0.00 0.00 3.96
192 193 6.989759 GGGTCTTCCTTTCTTTAATTTTTGCA 59.010 34.615 0.00 0.00 0.00 4.08
193 194 7.217200 AGGGTCTTCCTTTCTTTAATTTTTGC 58.783 34.615 0.00 0.00 45.47 3.68
196 197 9.877222 TCTTAGGGTCTTCCTTTCTTTAATTTT 57.123 29.630 0.00 0.00 45.47 1.82
197 198 9.877222 TTCTTAGGGTCTTCCTTTCTTTAATTT 57.123 29.630 0.00 0.00 45.47 1.82
200 201 9.955102 GTATTCTTAGGGTCTTCCTTTCTTTAA 57.045 33.333 0.00 0.00 45.47 1.52
201 202 8.546322 GGTATTCTTAGGGTCTTCCTTTCTTTA 58.454 37.037 0.00 0.00 45.47 1.85
202 203 7.403671 GGTATTCTTAGGGTCTTCCTTTCTTT 58.596 38.462 0.00 0.00 45.47 2.52
203 204 6.069556 GGGTATTCTTAGGGTCTTCCTTTCTT 60.070 42.308 0.00 0.00 45.47 2.52
204 205 5.429109 GGGTATTCTTAGGGTCTTCCTTTCT 59.571 44.000 0.00 0.00 45.47 2.52
205 206 5.191124 TGGGTATTCTTAGGGTCTTCCTTTC 59.809 44.000 0.00 0.00 45.47 2.62
206 207 5.105853 TGGGTATTCTTAGGGTCTTCCTTT 58.894 41.667 0.00 0.00 45.47 3.11
207 208 4.706616 TGGGTATTCTTAGGGTCTTCCTT 58.293 43.478 0.00 0.00 45.47 3.36
209 210 4.720273 TCTTGGGTATTCTTAGGGTCTTCC 59.280 45.833 0.00 0.00 0.00 3.46
210 211 5.952347 TCTTGGGTATTCTTAGGGTCTTC 57.048 43.478 0.00 0.00 0.00 2.87
211 212 6.100424 CAGATCTTGGGTATTCTTAGGGTCTT 59.900 42.308 0.00 0.00 0.00 3.01
212 213 5.604650 CAGATCTTGGGTATTCTTAGGGTCT 59.395 44.000 0.00 0.00 0.00 3.85
213 214 5.602978 TCAGATCTTGGGTATTCTTAGGGTC 59.397 44.000 0.00 0.00 0.00 4.46
214 215 5.538877 TCAGATCTTGGGTATTCTTAGGGT 58.461 41.667 0.00 0.00 0.00 4.34
215 216 6.500589 TTCAGATCTTGGGTATTCTTAGGG 57.499 41.667 0.00 0.00 0.00 3.53
216 217 8.807948 TTTTTCAGATCTTGGGTATTCTTAGG 57.192 34.615 0.00 0.00 0.00 2.69
245 246 9.883142 TGTGTTTCTTTGTTTTGGATATCTTTT 57.117 25.926 2.05 0.00 0.00 2.27
249 250 9.061610 CGTATGTGTTTCTTTGTTTTGGATATC 57.938 33.333 0.00 0.00 0.00 1.63
250 251 8.788806 TCGTATGTGTTTCTTTGTTTTGGATAT 58.211 29.630 0.00 0.00 0.00 1.63
251 252 8.155821 TCGTATGTGTTTCTTTGTTTTGGATA 57.844 30.769 0.00 0.00 0.00 2.59
252 253 7.033530 TCGTATGTGTTTCTTTGTTTTGGAT 57.966 32.000 0.00 0.00 0.00 3.41
253 254 6.438259 TCGTATGTGTTTCTTTGTTTTGGA 57.562 33.333 0.00 0.00 0.00 3.53
254 255 6.970043 TCTTCGTATGTGTTTCTTTGTTTTGG 59.030 34.615 0.00 0.00 0.00 3.28
255 256 7.962934 TCTTCGTATGTGTTTCTTTGTTTTG 57.037 32.000 0.00 0.00 0.00 2.44
256 257 8.856247 GTTTCTTCGTATGTGTTTCTTTGTTTT 58.144 29.630 0.00 0.00 0.00 2.43
257 258 8.024285 TGTTTCTTCGTATGTGTTTCTTTGTTT 58.976 29.630 0.00 0.00 0.00 2.83
258 259 7.531716 TGTTTCTTCGTATGTGTTTCTTTGTT 58.468 30.769 0.00 0.00 0.00 2.83
259 260 7.065324 TCTGTTTCTTCGTATGTGTTTCTTTGT 59.935 33.333 0.00 0.00 0.00 2.83
260 261 7.406553 TCTGTTTCTTCGTATGTGTTTCTTTG 58.593 34.615 0.00 0.00 0.00 2.77
261 262 7.548196 TCTGTTTCTTCGTATGTGTTTCTTT 57.452 32.000 0.00 0.00 0.00 2.52
262 263 7.065324 TGTTCTGTTTCTTCGTATGTGTTTCTT 59.935 33.333 0.00 0.00 0.00 2.52
263 264 6.537301 TGTTCTGTTTCTTCGTATGTGTTTCT 59.463 34.615 0.00 0.00 0.00 2.52
264 265 6.711579 TGTTCTGTTTCTTCGTATGTGTTTC 58.288 36.000 0.00 0.00 0.00 2.78
265 266 6.315393 ACTGTTCTGTTTCTTCGTATGTGTTT 59.685 34.615 0.00 0.00 0.00 2.83
266 267 5.815740 ACTGTTCTGTTTCTTCGTATGTGTT 59.184 36.000 0.00 0.00 0.00 3.32
267 268 5.357257 ACTGTTCTGTTTCTTCGTATGTGT 58.643 37.500 0.00 0.00 0.00 3.72
268 269 5.907197 ACTGTTCTGTTTCTTCGTATGTG 57.093 39.130 0.00 0.00 0.00 3.21
269 270 6.046593 TCAACTGTTCTGTTTCTTCGTATGT 58.953 36.000 0.00 0.00 0.00 2.29
270 271 6.525121 TCAACTGTTCTGTTTCTTCGTATG 57.475 37.500 0.00 0.00 0.00 2.39
271 272 7.548196 TTTCAACTGTTCTGTTTCTTCGTAT 57.452 32.000 0.00 0.00 0.00 3.06
272 273 6.971527 TTTCAACTGTTCTGTTTCTTCGTA 57.028 33.333 0.00 0.00 0.00 3.43
273 274 5.873179 TTTCAACTGTTCTGTTTCTTCGT 57.127 34.783 0.00 0.00 0.00 3.85
274 275 6.251376 CCTTTTTCAACTGTTCTGTTTCTTCG 59.749 38.462 0.00 0.00 0.00 3.79
275 276 6.035005 GCCTTTTTCAACTGTTCTGTTTCTTC 59.965 38.462 0.00 0.00 0.00 2.87
276 277 5.869344 GCCTTTTTCAACTGTTCTGTTTCTT 59.131 36.000 0.00 0.00 0.00 2.52
277 278 5.410924 GCCTTTTTCAACTGTTCTGTTTCT 58.589 37.500 0.00 0.00 0.00 2.52
278 279 4.566759 GGCCTTTTTCAACTGTTCTGTTTC 59.433 41.667 0.00 0.00 0.00 2.78
279 280 4.020662 TGGCCTTTTTCAACTGTTCTGTTT 60.021 37.500 3.32 0.00 0.00 2.83
280 281 3.513515 TGGCCTTTTTCAACTGTTCTGTT 59.486 39.130 3.32 0.00 0.00 3.16
281 282 3.096092 TGGCCTTTTTCAACTGTTCTGT 58.904 40.909 3.32 0.00 0.00 3.41
282 283 3.447742 GTGGCCTTTTTCAACTGTTCTG 58.552 45.455 3.32 0.00 0.00 3.02
283 284 2.099098 CGTGGCCTTTTTCAACTGTTCT 59.901 45.455 3.32 0.00 0.00 3.01
284 285 2.459934 CGTGGCCTTTTTCAACTGTTC 58.540 47.619 3.32 0.00 0.00 3.18
285 286 1.136110 CCGTGGCCTTTTTCAACTGTT 59.864 47.619 3.32 0.00 0.00 3.16
286 287 0.744281 CCGTGGCCTTTTTCAACTGT 59.256 50.000 3.32 0.00 0.00 3.55
287 288 0.597377 GCCGTGGCCTTTTTCAACTG 60.597 55.000 3.32 0.00 34.56 3.16
288 289 1.739667 GCCGTGGCCTTTTTCAACT 59.260 52.632 3.32 0.00 34.56 3.16
289 290 1.660264 CGCCGTGGCCTTTTTCAAC 60.660 57.895 3.32 0.00 37.98 3.18
290 291 2.122167 ACGCCGTGGCCTTTTTCAA 61.122 52.632 3.32 0.00 37.98 2.69
291 292 2.517402 ACGCCGTGGCCTTTTTCA 60.517 55.556 3.32 0.00 37.98 2.69
292 293 2.050442 CACGCCGTGGCCTTTTTC 60.050 61.111 9.90 0.00 37.98 2.29
293 294 2.831284 ACACGCCGTGGCCTTTTT 60.831 55.556 22.60 0.00 37.94 1.94
294 295 2.386064 TAGACACGCCGTGGCCTTTT 62.386 55.000 21.41 3.18 43.69 2.27
295 296 2.386064 TTAGACACGCCGTGGCCTTT 62.386 55.000 21.41 3.61 43.69 3.11
296 297 2.180159 ATTAGACACGCCGTGGCCTT 62.180 55.000 21.41 4.48 43.69 4.35
297 298 2.656069 ATTAGACACGCCGTGGCCT 61.656 57.895 21.41 18.31 43.69 5.19
298 299 2.125269 ATTAGACACGCCGTGGCC 60.125 61.111 21.41 11.62 43.69 5.36
299 300 1.740296 ACATTAGACACGCCGTGGC 60.740 57.895 22.60 20.06 42.83 5.01
300 301 1.358725 CCACATTAGACACGCCGTGG 61.359 60.000 22.60 4.74 37.94 4.94
301 302 1.358725 CCCACATTAGACACGCCGTG 61.359 60.000 16.94 16.94 39.75 4.94
302 303 1.079405 CCCACATTAGACACGCCGT 60.079 57.895 0.00 0.00 0.00 5.68
303 304 2.461110 GCCCACATTAGACACGCCG 61.461 63.158 0.00 0.00 0.00 6.46
304 305 0.177141 TAGCCCACATTAGACACGCC 59.823 55.000 0.00 0.00 0.00 5.68
305 306 2.240493 ATAGCCCACATTAGACACGC 57.760 50.000 0.00 0.00 0.00 5.34
306 307 4.689071 TGTTATAGCCCACATTAGACACG 58.311 43.478 0.00 0.00 0.00 4.49
307 308 5.878116 TGTTGTTATAGCCCACATTAGACAC 59.122 40.000 0.00 0.00 0.00 3.67
308 309 5.878116 GTGTTGTTATAGCCCACATTAGACA 59.122 40.000 2.83 0.00 0.00 3.41
309 310 5.006358 CGTGTTGTTATAGCCCACATTAGAC 59.994 44.000 7.09 0.00 0.00 2.59
310 311 5.105269 TCGTGTTGTTATAGCCCACATTAGA 60.105 40.000 7.09 0.57 0.00 2.10
311 312 5.113383 TCGTGTTGTTATAGCCCACATTAG 58.887 41.667 7.09 0.00 0.00 1.73
312 313 5.087391 TCGTGTTGTTATAGCCCACATTA 57.913 39.130 7.09 0.00 0.00 1.90
313 314 3.945346 TCGTGTTGTTATAGCCCACATT 58.055 40.909 7.09 0.00 0.00 2.71
314 315 3.620427 TCGTGTTGTTATAGCCCACAT 57.380 42.857 7.09 0.00 0.00 3.21
315 316 3.404224 TTCGTGTTGTTATAGCCCACA 57.596 42.857 7.09 0.00 0.00 4.17
316 317 4.469552 GTTTTCGTGTTGTTATAGCCCAC 58.530 43.478 0.00 0.00 0.00 4.61
317 318 3.502979 GGTTTTCGTGTTGTTATAGCCCA 59.497 43.478 0.00 0.00 0.00 5.36
318 319 3.754850 AGGTTTTCGTGTTGTTATAGCCC 59.245 43.478 0.00 0.00 0.00 5.19
319 320 4.694037 AGAGGTTTTCGTGTTGTTATAGCC 59.306 41.667 0.00 0.00 0.00 3.93
320 321 5.857822 AGAGGTTTTCGTGTTGTTATAGC 57.142 39.130 0.00 0.00 0.00 2.97
321 322 8.433126 CAAGTAGAGGTTTTCGTGTTGTTATAG 58.567 37.037 0.00 0.00 0.00 1.31
322 323 7.385752 CCAAGTAGAGGTTTTCGTGTTGTTATA 59.614 37.037 0.00 0.00 0.00 0.98
323 324 6.204108 CCAAGTAGAGGTTTTCGTGTTGTTAT 59.796 38.462 0.00 0.00 0.00 1.89
324 325 5.524646 CCAAGTAGAGGTTTTCGTGTTGTTA 59.475 40.000 0.00 0.00 0.00 2.41
325 326 4.334481 CCAAGTAGAGGTTTTCGTGTTGTT 59.666 41.667 0.00 0.00 0.00 2.83
326 327 3.875134 CCAAGTAGAGGTTTTCGTGTTGT 59.125 43.478 0.00 0.00 0.00 3.32
327 328 4.124238 TCCAAGTAGAGGTTTTCGTGTTG 58.876 43.478 0.00 0.00 0.00 3.33
328 329 4.100498 TCTCCAAGTAGAGGTTTTCGTGTT 59.900 41.667 0.00 0.00 34.46 3.32
329 330 3.640029 TCTCCAAGTAGAGGTTTTCGTGT 59.360 43.478 0.00 0.00 34.46 4.49
330 331 3.988517 GTCTCCAAGTAGAGGTTTTCGTG 59.011 47.826 0.00 0.00 34.46 4.35
331 332 3.640029 TGTCTCCAAGTAGAGGTTTTCGT 59.360 43.478 0.00 0.00 34.46 3.85
332 333 4.252971 TGTCTCCAAGTAGAGGTTTTCG 57.747 45.455 0.00 0.00 34.46 3.46
333 334 4.393371 GCATGTCTCCAAGTAGAGGTTTTC 59.607 45.833 0.00 0.00 34.46 2.29
334 335 4.202461 TGCATGTCTCCAAGTAGAGGTTTT 60.202 41.667 0.00 0.00 34.46 2.43
335 336 3.327757 TGCATGTCTCCAAGTAGAGGTTT 59.672 43.478 0.00 0.00 34.46 3.27
336 337 2.906389 TGCATGTCTCCAAGTAGAGGTT 59.094 45.455 0.00 0.00 34.46 3.50
337 338 2.540383 TGCATGTCTCCAAGTAGAGGT 58.460 47.619 0.00 0.00 34.46 3.85
338 339 3.834489 ATGCATGTCTCCAAGTAGAGG 57.166 47.619 0.00 0.00 34.46 3.69
339 340 6.072286 ACAAAAATGCATGTCTCCAAGTAGAG 60.072 38.462 0.00 0.00 35.04 2.43
340 341 5.769662 ACAAAAATGCATGTCTCCAAGTAGA 59.230 36.000 0.00 0.00 0.00 2.59
341 342 6.017400 ACAAAAATGCATGTCTCCAAGTAG 57.983 37.500 0.00 0.00 0.00 2.57
342 343 6.349280 GCTACAAAAATGCATGTCTCCAAGTA 60.349 38.462 0.00 0.00 0.00 2.24
343 344 4.942761 ACAAAAATGCATGTCTCCAAGT 57.057 36.364 0.00 0.00 0.00 3.16
344 345 4.860907 GCTACAAAAATGCATGTCTCCAAG 59.139 41.667 0.00 0.00 0.00 3.61
345 346 4.280425 TGCTACAAAAATGCATGTCTCCAA 59.720 37.500 0.00 0.00 0.00 3.53
346 347 3.825585 TGCTACAAAAATGCATGTCTCCA 59.174 39.130 0.00 0.00 0.00 3.86
347 348 4.439305 TGCTACAAAAATGCATGTCTCC 57.561 40.909 0.00 0.00 0.00 3.71
348 349 7.168637 CCAATATGCTACAAAAATGCATGTCTC 59.831 37.037 0.00 0.00 45.52 3.36
349 350 6.982141 CCAATATGCTACAAAAATGCATGTCT 59.018 34.615 0.00 0.00 45.52 3.41
350 351 6.757947 ACCAATATGCTACAAAAATGCATGTC 59.242 34.615 0.00 0.00 45.52 3.06
351 352 6.642430 ACCAATATGCTACAAAAATGCATGT 58.358 32.000 0.00 0.00 45.52 3.21
352 353 6.074729 CGACCAATATGCTACAAAAATGCATG 60.075 38.462 0.00 0.00 45.52 4.06
354 355 5.105957 ACGACCAATATGCTACAAAAATGCA 60.106 36.000 0.00 0.00 41.13 3.96
355 356 5.229887 CACGACCAATATGCTACAAAAATGC 59.770 40.000 0.00 0.00 0.00 3.56
356 357 5.229887 GCACGACCAATATGCTACAAAAATG 59.770 40.000 0.00 0.00 36.40 2.32
357 358 5.339990 GCACGACCAATATGCTACAAAAAT 58.660 37.500 0.00 0.00 36.40 1.82
358 359 4.380023 GGCACGACCAATATGCTACAAAAA 60.380 41.667 0.00 0.00 39.38 1.94
359 360 3.127895 GGCACGACCAATATGCTACAAAA 59.872 43.478 0.00 0.00 39.38 2.44
360 361 2.680841 GGCACGACCAATATGCTACAAA 59.319 45.455 0.00 0.00 39.38 2.83
361 362 2.285083 GGCACGACCAATATGCTACAA 58.715 47.619 0.00 0.00 39.38 2.41
362 363 1.474320 GGGCACGACCAATATGCTACA 60.474 52.381 0.00 0.00 42.05 2.74
363 364 1.202651 AGGGCACGACCAATATGCTAC 60.203 52.381 0.00 0.00 42.05 3.58
364 365 1.128200 AGGGCACGACCAATATGCTA 58.872 50.000 0.00 0.00 42.05 3.49
365 366 1.128200 TAGGGCACGACCAATATGCT 58.872 50.000 0.00 0.00 42.05 3.79
366 367 1.961793 TTAGGGCACGACCAATATGC 58.038 50.000 0.00 0.00 42.05 3.14
367 368 3.541632 AGTTTAGGGCACGACCAATATG 58.458 45.455 0.00 0.00 42.05 1.78
368 369 3.926058 AGTTTAGGGCACGACCAATAT 57.074 42.857 0.00 0.00 42.05 1.28
369 370 3.008157 TGAAGTTTAGGGCACGACCAATA 59.992 43.478 0.00 0.00 42.05 1.90
370 371 2.224670 TGAAGTTTAGGGCACGACCAAT 60.225 45.455 0.00 0.00 42.05 3.16
371 372 1.141254 TGAAGTTTAGGGCACGACCAA 59.859 47.619 0.00 0.00 42.05 3.67
372 373 0.759959 TGAAGTTTAGGGCACGACCA 59.240 50.000 0.00 0.00 42.05 4.02
373 374 2.109425 ATGAAGTTTAGGGCACGACC 57.891 50.000 0.00 0.00 37.93 4.79
374 375 3.858247 AGTATGAAGTTTAGGGCACGAC 58.142 45.455 0.00 0.00 0.00 4.34
375 376 5.186409 AGTTAGTATGAAGTTTAGGGCACGA 59.814 40.000 0.00 0.00 0.00 4.35
376 377 5.416947 AGTTAGTATGAAGTTTAGGGCACG 58.583 41.667 0.00 0.00 0.00 5.34
377 378 6.653740 ACAAGTTAGTATGAAGTTTAGGGCAC 59.346 38.462 0.00 0.00 0.00 5.01
378 379 6.775708 ACAAGTTAGTATGAAGTTTAGGGCA 58.224 36.000 0.00 0.00 0.00 5.36
379 380 8.782339 TTACAAGTTAGTATGAAGTTTAGGGC 57.218 34.615 0.00 0.00 0.00 5.19
404 405 9.036671 CGAATTGGTACCACTTTAAAAACAATT 57.963 29.630 16.04 10.99 38.33 2.32
405 406 8.198778 ACGAATTGGTACCACTTTAAAAACAAT 58.801 29.630 16.04 0.00 0.00 2.71
406 407 7.545489 ACGAATTGGTACCACTTTAAAAACAA 58.455 30.769 16.04 0.00 0.00 2.83
407 408 7.098074 ACGAATTGGTACCACTTTAAAAACA 57.902 32.000 16.04 0.00 0.00 2.83
408 409 7.701501 TCAACGAATTGGTACCACTTTAAAAAC 59.298 33.333 16.04 1.63 36.39 2.43
409 410 7.769220 TCAACGAATTGGTACCACTTTAAAAA 58.231 30.769 16.04 0.00 36.39 1.94
410 411 7.330900 TCAACGAATTGGTACCACTTTAAAA 57.669 32.000 16.04 0.00 36.39 1.52
411 412 6.939132 TCAACGAATTGGTACCACTTTAAA 57.061 33.333 16.04 0.00 36.39 1.52
412 413 6.939132 TTCAACGAATTGGTACCACTTTAA 57.061 33.333 16.04 0.00 36.39 1.52
413 414 6.543100 AGTTTCAACGAATTGGTACCACTTTA 59.457 34.615 16.04 0.00 36.39 1.85
414 415 5.358725 AGTTTCAACGAATTGGTACCACTTT 59.641 36.000 16.04 11.66 36.39 2.66
415 416 4.885325 AGTTTCAACGAATTGGTACCACTT 59.115 37.500 16.04 16.45 36.39 3.16
416 417 4.274950 CAGTTTCAACGAATTGGTACCACT 59.725 41.667 16.04 6.49 36.39 4.00
417 418 4.035909 ACAGTTTCAACGAATTGGTACCAC 59.964 41.667 16.04 1.96 36.39 4.16
418 419 4.200874 ACAGTTTCAACGAATTGGTACCA 58.799 39.130 11.60 11.60 36.39 3.25
419 420 4.319984 GGACAGTTTCAACGAATTGGTACC 60.320 45.833 4.43 4.43 36.39 3.34
420 421 4.514066 AGGACAGTTTCAACGAATTGGTAC 59.486 41.667 0.00 0.00 36.39 3.34
421 422 4.710324 AGGACAGTTTCAACGAATTGGTA 58.290 39.130 0.00 0.00 36.39 3.25
422 423 3.551846 AGGACAGTTTCAACGAATTGGT 58.448 40.909 0.00 0.00 36.39 3.67
423 424 5.682943 TTAGGACAGTTTCAACGAATTGG 57.317 39.130 0.00 0.00 36.39 3.16
424 425 7.113404 CACAATTAGGACAGTTTCAACGAATTG 59.887 37.037 0.00 0.00 37.62 2.32
425 426 7.138736 CACAATTAGGACAGTTTCAACGAATT 58.861 34.615 0.00 0.00 0.00 2.17
426 427 6.293955 CCACAATTAGGACAGTTTCAACGAAT 60.294 38.462 0.00 0.00 0.00 3.34
427 428 5.008217 CCACAATTAGGACAGTTTCAACGAA 59.992 40.000 0.00 0.00 0.00 3.85
428 429 4.513692 CCACAATTAGGACAGTTTCAACGA 59.486 41.667 0.00 0.00 0.00 3.85
429 430 4.274950 ACCACAATTAGGACAGTTTCAACG 59.725 41.667 3.29 0.00 0.00 4.10
430 431 5.767816 ACCACAATTAGGACAGTTTCAAC 57.232 39.130 3.29 0.00 0.00 3.18
431 432 5.766174 GGTACCACAATTAGGACAGTTTCAA 59.234 40.000 7.15 0.00 0.00 2.69
432 433 5.310451 GGTACCACAATTAGGACAGTTTCA 58.690 41.667 7.15 0.00 0.00 2.69
433 434 4.390909 CGGTACCACAATTAGGACAGTTTC 59.609 45.833 13.54 0.00 0.00 2.78
434 435 4.320870 CGGTACCACAATTAGGACAGTTT 58.679 43.478 13.54 0.00 0.00 2.66
435 436 3.307199 CCGGTACCACAATTAGGACAGTT 60.307 47.826 13.54 0.00 0.00 3.16
436 437 2.235402 CCGGTACCACAATTAGGACAGT 59.765 50.000 13.54 0.00 0.00 3.55
437 438 2.901249 CCGGTACCACAATTAGGACAG 58.099 52.381 13.54 0.00 0.00 3.51
438 439 1.065998 GCCGGTACCACAATTAGGACA 60.066 52.381 13.54 0.00 0.00 4.02
439 440 1.660167 GCCGGTACCACAATTAGGAC 58.340 55.000 13.54 0.00 0.00 3.85
440 441 0.176219 CGCCGGTACCACAATTAGGA 59.824 55.000 13.54 0.00 0.00 2.94
441 442 0.108041 ACGCCGGTACCACAATTAGG 60.108 55.000 13.54 3.94 0.00 2.69
442 443 1.003851 CACGCCGGTACCACAATTAG 58.996 55.000 13.54 0.00 0.00 1.73
443 444 1.020333 GCACGCCGGTACCACAATTA 61.020 55.000 13.54 0.00 0.00 1.40
444 445 2.329614 GCACGCCGGTACCACAATT 61.330 57.895 13.54 0.00 0.00 2.32
445 446 2.744709 GCACGCCGGTACCACAAT 60.745 61.111 13.54 0.00 0.00 2.71
446 447 3.752088 TTGCACGCCGGTACCACAA 62.752 57.895 13.54 3.27 0.00 3.33
447 448 3.538785 ATTGCACGCCGGTACCACA 62.539 57.895 13.54 0.00 0.00 4.17
448 449 1.020333 TAATTGCACGCCGGTACCAC 61.020 55.000 13.54 1.89 0.00 4.16
449 450 0.321387 TTAATTGCACGCCGGTACCA 60.321 50.000 13.54 0.00 0.00 3.25
450 451 0.097499 GTTAATTGCACGCCGGTACC 59.903 55.000 1.90 0.16 0.00 3.34
451 452 1.061566 GAGTTAATTGCACGCCGGTAC 59.938 52.381 1.90 0.00 0.00 3.34
452 453 1.361793 GAGTTAATTGCACGCCGGTA 58.638 50.000 1.90 0.00 0.00 4.02
453 454 1.632046 CGAGTTAATTGCACGCCGGT 61.632 55.000 1.90 0.00 0.00 5.28
454 455 1.060308 CGAGTTAATTGCACGCCGG 59.940 57.895 0.00 0.00 0.00 6.13
455 456 1.580132 GCGAGTTAATTGCACGCCG 60.580 57.895 12.79 8.37 42.79 6.46
456 457 4.360101 GCGAGTTAATTGCACGCC 57.640 55.556 12.79 0.57 42.79 5.68
458 459 4.028383 CCATTAAGCGAGTTAATTGCACG 58.972 43.478 0.00 0.00 39.00 5.34
459 460 5.229921 TCCATTAAGCGAGTTAATTGCAC 57.770 39.130 0.00 0.00 39.00 4.57
460 461 4.335315 CCTCCATTAAGCGAGTTAATTGCA 59.665 41.667 0.00 0.00 39.00 4.08
461 462 4.789802 GCCTCCATTAAGCGAGTTAATTGC 60.790 45.833 0.00 0.00 39.00 3.56
462 463 4.335315 TGCCTCCATTAAGCGAGTTAATTG 59.665 41.667 0.00 0.00 39.00 2.32
463 464 4.523083 TGCCTCCATTAAGCGAGTTAATT 58.477 39.130 0.00 0.00 39.00 1.40
464 465 4.150897 TGCCTCCATTAAGCGAGTTAAT 57.849 40.909 0.00 0.00 41.29 1.40
465 466 3.620427 TGCCTCCATTAAGCGAGTTAA 57.380 42.857 0.00 0.00 35.03 2.01
466 467 3.055385 AGTTGCCTCCATTAAGCGAGTTA 60.055 43.478 0.00 0.00 0.00 2.24
467 468 2.084546 GTTGCCTCCATTAAGCGAGTT 58.915 47.619 0.00 0.00 0.00 3.01
468 469 1.279271 AGTTGCCTCCATTAAGCGAGT 59.721 47.619 0.00 0.00 0.00 4.18
469 470 2.029838 AGTTGCCTCCATTAAGCGAG 57.970 50.000 0.00 0.00 0.00 5.03
470 471 2.027192 AGAAGTTGCCTCCATTAAGCGA 60.027 45.455 0.00 0.00 0.00 4.93
471 472 2.359900 AGAAGTTGCCTCCATTAAGCG 58.640 47.619 0.00 0.00 0.00 4.68
472 473 5.126067 TCATAGAAGTTGCCTCCATTAAGC 58.874 41.667 0.00 0.00 0.00 3.09
473 474 6.206243 CCATCATAGAAGTTGCCTCCATTAAG 59.794 42.308 0.00 0.00 0.00 1.85
474 475 6.064060 CCATCATAGAAGTTGCCTCCATTAA 58.936 40.000 0.00 0.00 0.00 1.40
475 476 5.624159 CCATCATAGAAGTTGCCTCCATTA 58.376 41.667 0.00 0.00 0.00 1.90
476 477 4.467769 CCATCATAGAAGTTGCCTCCATT 58.532 43.478 0.00 0.00 0.00 3.16
477 478 3.749954 GCCATCATAGAAGTTGCCTCCAT 60.750 47.826 0.00 0.00 0.00 3.41
478 479 2.421952 GCCATCATAGAAGTTGCCTCCA 60.422 50.000 0.00 0.00 0.00 3.86
479 480 2.158696 AGCCATCATAGAAGTTGCCTCC 60.159 50.000 0.00 0.00 0.00 4.30
480 481 3.205784 AGCCATCATAGAAGTTGCCTC 57.794 47.619 0.00 0.00 0.00 4.70
481 482 3.181450 GGTAGCCATCATAGAAGTTGCCT 60.181 47.826 0.00 0.00 0.00 4.75
482 483 3.142174 GGTAGCCATCATAGAAGTTGCC 58.858 50.000 0.00 0.00 0.00 4.52
483 484 3.808728 TGGTAGCCATCATAGAAGTTGC 58.191 45.455 0.00 0.00 0.00 4.17
484 485 3.812053 GCTGGTAGCCATCATAGAAGTTG 59.188 47.826 0.00 0.00 34.48 3.16
485 486 4.078639 GCTGGTAGCCATCATAGAAGTT 57.921 45.455 0.00 0.00 34.48 2.66
486 487 3.760580 GCTGGTAGCCATCATAGAAGT 57.239 47.619 0.00 0.00 34.48 3.01
498 499 0.682292 GGATACTGAGGGCTGGTAGC 59.318 60.000 0.00 0.00 41.46 3.58
499 500 1.689273 GTGGATACTGAGGGCTGGTAG 59.311 57.143 0.00 0.00 37.61 3.18
500 501 1.007842 TGTGGATACTGAGGGCTGGTA 59.992 52.381 0.00 0.00 37.61 3.25
501 502 0.252696 TGTGGATACTGAGGGCTGGT 60.253 55.000 0.00 0.00 37.61 4.00
502 503 0.911769 TTGTGGATACTGAGGGCTGG 59.088 55.000 0.00 0.00 37.61 4.85
503 504 1.745141 GCTTGTGGATACTGAGGGCTG 60.745 57.143 0.00 0.00 37.61 4.85
504 505 0.543749 GCTTGTGGATACTGAGGGCT 59.456 55.000 0.00 0.00 37.61 5.19
505 506 0.253044 TGCTTGTGGATACTGAGGGC 59.747 55.000 0.00 0.00 37.61 5.19
506 507 1.134280 CCTGCTTGTGGATACTGAGGG 60.134 57.143 0.00 0.00 37.61 4.30
507 508 1.833630 TCCTGCTTGTGGATACTGAGG 59.166 52.381 0.00 0.00 37.61 3.86
508 509 3.726607 GATCCTGCTTGTGGATACTGAG 58.273 50.000 0.00 0.00 43.68 3.35
509 510 2.101415 CGATCCTGCTTGTGGATACTGA 59.899 50.000 0.00 0.00 43.68 3.41
510 511 2.101415 TCGATCCTGCTTGTGGATACTG 59.899 50.000 0.00 0.00 43.68 2.74
511 512 2.101582 GTCGATCCTGCTTGTGGATACT 59.898 50.000 0.00 0.00 43.68 2.12
512 513 2.474816 GTCGATCCTGCTTGTGGATAC 58.525 52.381 0.00 0.00 43.68 2.24
513 514 1.067060 CGTCGATCCTGCTTGTGGATA 59.933 52.381 0.00 0.00 43.68 2.59
514 515 0.179100 CGTCGATCCTGCTTGTGGAT 60.179 55.000 0.00 0.00 46.05 3.41
515 516 1.215382 CGTCGATCCTGCTTGTGGA 59.785 57.895 0.00 0.00 38.06 4.02
516 517 2.456119 GCGTCGATCCTGCTTGTGG 61.456 63.158 0.00 0.00 0.00 4.17
517 518 1.416813 GAGCGTCGATCCTGCTTGTG 61.417 60.000 0.00 0.00 39.49 3.33
518 519 1.153745 GAGCGTCGATCCTGCTTGT 60.154 57.895 0.00 0.00 39.49 3.16
519 520 1.880340 GGAGCGTCGATCCTGCTTG 60.880 63.158 22.03 0.00 39.49 4.01
520 521 1.680522 ATGGAGCGTCGATCCTGCTT 61.681 55.000 28.21 9.61 39.11 3.91
521 522 2.130426 ATGGAGCGTCGATCCTGCT 61.130 57.895 28.21 11.82 39.11 4.24
522 523 1.953138 CATGGAGCGTCGATCCTGC 60.953 63.158 28.21 6.98 39.11 4.85
523 524 1.300465 CCATGGAGCGTCGATCCTG 60.300 63.158 28.21 21.83 39.11 3.86
524 525 3.133014 CCATGGAGCGTCGATCCT 58.867 61.111 28.21 12.61 39.11 3.24
525 526 2.663188 GCCATGGAGCGTCGATCC 60.663 66.667 22.49 22.49 38.78 3.36
526 527 2.663188 GGCCATGGAGCGTCGATC 60.663 66.667 18.40 0.83 0.00 3.69
527 528 4.241555 GGGCCATGGAGCGTCGAT 62.242 66.667 18.40 0.00 0.00 3.59
529 530 4.776322 TTGGGCCATGGAGCGTCG 62.776 66.667 18.40 0.00 0.00 5.12
530 531 2.361104 TTTGGGCCATGGAGCGTC 60.361 61.111 18.40 0.00 0.00 5.19
531 532 2.361610 CTTTGGGCCATGGAGCGT 60.362 61.111 18.40 0.00 0.00 5.07
532 533 3.830192 GCTTTGGGCCATGGAGCG 61.830 66.667 18.40 0.00 34.27 5.03
533 534 3.830192 CGCTTTGGGCCATGGAGC 61.830 66.667 18.40 20.75 37.74 4.70
534 535 2.045045 TCGCTTTGGGCCATGGAG 60.045 61.111 18.40 7.41 37.74 3.86
535 536 2.045045 CTCGCTTTGGGCCATGGA 60.045 61.111 18.40 1.32 37.74 3.41
536 537 2.045045 TCTCGCTTTGGGCCATGG 60.045 61.111 7.26 7.63 37.74 3.66
537 538 2.117156 CCTCTCGCTTTGGGCCATG 61.117 63.158 7.26 4.66 37.74 3.66
538 539 2.273449 CCTCTCGCTTTGGGCCAT 59.727 61.111 7.26 0.00 37.74 4.40
539 540 4.033776 CCCTCTCGCTTTGGGCCA 62.034 66.667 0.00 0.00 37.74 5.36
542 543 2.437359 CTGCCCTCTCGCTTTGGG 60.437 66.667 0.00 0.00 43.62 4.12
543 544 3.130160 GCTGCCCTCTCGCTTTGG 61.130 66.667 0.00 0.00 0.00 3.28
544 545 2.046507 AGCTGCCCTCTCGCTTTG 60.047 61.111 0.00 0.00 0.00 2.77
545 546 2.267324 GAGCTGCCCTCTCGCTTT 59.733 61.111 0.00 0.00 37.60 3.51
546 547 4.140599 CGAGCTGCCCTCTCGCTT 62.141 66.667 0.00 0.00 45.32 4.68
550 551 3.134792 TCGACGAGCTGCCCTCTC 61.135 66.667 0.00 0.00 38.49 3.20
551 552 3.444805 GTCGACGAGCTGCCCTCT 61.445 66.667 0.00 0.00 38.49 3.69
552 553 4.838486 CGTCGACGAGCTGCCCTC 62.838 72.222 33.35 0.00 43.02 4.30
560 561 0.796870 TAGCATTGCACGTCGACGAG 60.797 55.000 41.52 34.36 43.02 4.18
561 562 0.179148 ATAGCATTGCACGTCGACGA 60.179 50.000 41.52 21.79 43.02 4.20
562 563 0.043907 CATAGCATTGCACGTCGACG 60.044 55.000 34.58 34.58 46.33 5.12
563 564 1.277326 TCATAGCATTGCACGTCGAC 58.723 50.000 11.91 5.18 0.00 4.20
564 565 2.223537 ATCATAGCATTGCACGTCGA 57.776 45.000 11.91 0.33 0.00 4.20
565 566 3.283256 GAAATCATAGCATTGCACGTCG 58.717 45.455 11.91 0.00 0.00 5.12
566 567 3.065233 TGGAAATCATAGCATTGCACGTC 59.935 43.478 11.91 0.00 0.00 4.34
567 568 3.016031 TGGAAATCATAGCATTGCACGT 58.984 40.909 11.91 0.00 0.00 4.49
568 569 3.065786 ACTGGAAATCATAGCATTGCACG 59.934 43.478 11.91 0.00 0.00 5.34
596 597 9.708222 CTAAACATGAAATCGTATCTTCTTTGG 57.292 33.333 0.00 0.00 0.00 3.28
605 606 7.609760 TTGCTGACTAAACATGAAATCGTAT 57.390 32.000 0.00 0.00 0.00 3.06
606 607 7.333174 TGATTGCTGACTAAACATGAAATCGTA 59.667 33.333 0.00 0.00 0.00 3.43
610 611 7.218228 TGTGATTGCTGACTAAACATGAAAT 57.782 32.000 0.00 0.00 0.00 2.17
627 628 3.189080 TCACCGAGAAGCAATTGTGATTG 59.811 43.478 7.40 0.00 44.42 2.67
629 630 3.005554 CTCACCGAGAAGCAATTGTGAT 58.994 45.455 7.40 0.00 32.83 3.06
632 633 1.072331 ACCTCACCGAGAAGCAATTGT 59.928 47.619 7.40 0.00 0.00 2.71
634 635 3.197766 TCATACCTCACCGAGAAGCAATT 59.802 43.478 0.00 0.00 0.00 2.32
635 636 2.766263 TCATACCTCACCGAGAAGCAAT 59.234 45.455 0.00 0.00 0.00 3.56
645 646 8.158789 AGAGTATAAGAGTAGTCATACCTCACC 58.841 40.741 0.00 0.00 31.78 4.02
733 1967 9.482175 AAGAGTATAGGAGTAGTCAATCAAACT 57.518 33.333 0.00 0.00 0.00 2.66
736 1970 8.824756 ACAAGAGTATAGGAGTAGTCAATCAA 57.175 34.615 0.00 0.00 0.00 2.57
737 1971 8.687242 CAACAAGAGTATAGGAGTAGTCAATCA 58.313 37.037 0.00 0.00 0.00 2.57
738 1972 8.688151 ACAACAAGAGTATAGGAGTAGTCAATC 58.312 37.037 0.00 0.00 0.00 2.67
739 1973 8.470805 CACAACAAGAGTATAGGAGTAGTCAAT 58.529 37.037 0.00 0.00 0.00 2.57
800 2050 1.614525 TCCTGAGCCTCCTGCACAT 60.615 57.895 0.00 0.00 44.83 3.21
830 2994 0.250553 TGTGGGCGATTTTTCTCGGT 60.251 50.000 0.00 0.00 39.05 4.69
968 3165 1.915078 CTGGTGGAGGTGGGGATGAC 61.915 65.000 0.00 0.00 0.00 3.06
1060 3312 2.742372 GTCCTTGTCGGCGTGCAT 60.742 61.111 6.85 0.00 0.00 3.96
1473 3783 1.405526 CGGGAAGAATCAAGAAGCGGA 60.406 52.381 0.00 0.00 0.00 5.54
1499 3809 1.132262 GAATTGCTCCCAAATTCGCGA 59.868 47.619 3.71 3.71 34.05 5.87
1575 3925 3.364366 CGTCAAGAAACAGAGATGGCAAC 60.364 47.826 0.00 0.00 0.00 4.17
1624 3999 1.597937 CGTTGTCAGGCTGCAAGAAAC 60.598 52.381 19.76 13.19 34.07 2.78
1634 4013 1.140816 GTTGAGTCTCGTTGTCAGGC 58.859 55.000 0.00 0.00 0.00 4.85
1849 4253 4.077184 TTAGTGCCCGCCTGGACG 62.077 66.667 0.00 0.03 37.49 4.79
1982 4756 5.068460 TCAGTAAACTGTTTTTGGGACATGG 59.932 40.000 11.48 0.00 44.12 3.66
1983 4757 6.142818 TCAGTAAACTGTTTTTGGGACATG 57.857 37.500 11.48 0.00 44.12 3.21
1984 4758 6.783708 TTCAGTAAACTGTTTTTGGGACAT 57.216 33.333 11.48 0.00 44.12 3.06
2071 4953 9.424319 CACTTTCTAGCATTCAACTACTTCTAA 57.576 33.333 0.00 0.00 0.00 2.10
2099 4981 3.441572 CCCAACAACTAATCAGCTTCAGG 59.558 47.826 0.00 0.00 0.00 3.86
2131 5013 8.046708 AGGCTGAGTGTGAATATGTGTTTATAA 58.953 33.333 0.00 0.00 0.00 0.98
2132 5014 7.564793 AGGCTGAGTGTGAATATGTGTTTATA 58.435 34.615 0.00 0.00 0.00 0.98
2213 5117 6.921857 TCAAGTTCTGAAGTTTCCTACTAACG 59.078 38.462 7.72 0.00 35.54 3.18
2219 5123 6.320418 GGGTTTTCAAGTTCTGAAGTTTCCTA 59.680 38.462 7.72 0.00 44.84 2.94
2296 5238 7.607250 TGTTCACACCTTACTGAAAACAATTT 58.393 30.769 0.00 0.00 0.00 1.82
2306 5274 6.039270 TCCTGAATTTTGTTCACACCTTACTG 59.961 38.462 0.00 0.00 0.00 2.74
2359 5327 7.977853 CCTGAAAACAATATATTGCAAGAAGCT 59.022 33.333 22.66 0.79 45.94 3.74
2360 5328 7.761249 ACCTGAAAACAATATATTGCAAGAAGC 59.239 33.333 22.66 8.67 41.38 3.86
2361 5329 9.643693 AACCTGAAAACAATATATTGCAAGAAG 57.356 29.630 22.66 15.11 41.38 2.85
2362 5330 9.995003 AAACCTGAAAACAATATATTGCAAGAA 57.005 25.926 22.66 7.70 41.38 2.52
2363 5331 9.995003 AAAACCTGAAAACAATATATTGCAAGA 57.005 25.926 22.66 0.00 41.38 3.02
2365 5333 9.553064 ACAAAACCTGAAAACAATATATTGCAA 57.447 25.926 22.66 0.00 41.38 4.08
2373 5341 7.865385 GCTGATGTACAAAACCTGAAAACAATA 59.135 33.333 0.00 0.00 0.00 1.90
2407 5375 9.732130 AAGACTAAAATCTCAGAACTTTGCTAT 57.268 29.630 0.00 0.00 0.00 2.97
2409 5377 7.716998 TCAAGACTAAAATCTCAGAACTTTGCT 59.283 33.333 0.00 0.00 0.00 3.91
2410 5378 7.865707 TCAAGACTAAAATCTCAGAACTTTGC 58.134 34.615 0.00 0.00 0.00 3.68
2411 5379 9.657121 GTTCAAGACTAAAATCTCAGAACTTTG 57.343 33.333 11.05 0.00 38.88 2.77
2412 5380 9.620259 AGTTCAAGACTAAAATCTCAGAACTTT 57.380 29.630 13.49 0.00 43.87 2.66
2413 5381 9.620259 AAGTTCAAGACTAAAATCTCAGAACTT 57.380 29.630 19.78 19.78 46.24 2.66
2415 5383 8.831550 ACAAGTTCAAGACTAAAATCTCAGAAC 58.168 33.333 10.63 10.63 40.47 3.01
2416 5384 8.964476 ACAAGTTCAAGACTAAAATCTCAGAA 57.036 30.769 0.00 0.00 37.72 3.02
2419 5387 9.787532 CAAAACAAGTTCAAGACTAAAATCTCA 57.212 29.630 0.00 0.00 37.72 3.27
2420 5388 8.746751 GCAAAACAAGTTCAAGACTAAAATCTC 58.253 33.333 0.00 0.00 37.72 2.75
2421 5389 8.250332 TGCAAAACAAGTTCAAGACTAAAATCT 58.750 29.630 0.00 0.00 37.72 2.40
2423 5391 8.819974 CATGCAAAACAAGTTCAAGACTAAAAT 58.180 29.630 0.00 0.00 37.72 1.82
2428 5453 5.329035 ACATGCAAAACAAGTTCAAGACT 57.671 34.783 0.00 0.00 41.47 3.24
2483 5508 9.515226 TTTCCATTTAACTTCTACTTACAGCAT 57.485 29.630 0.00 0.00 0.00 3.79
2665 5736 7.973944 GCAAATAGTACCAAATGGGAAACTAAG 59.026 37.037 4.17 5.24 39.97 2.18
2736 5808 9.507280 CAATATGCTAAATCAAACAGAAATCGT 57.493 29.630 0.00 0.00 0.00 3.73
2797 5924 8.178313 GCAGAAACTAGCTTTTAGGAAATACTG 58.822 37.037 0.00 0.00 0.00 2.74
2935 6075 1.335132 GGAAGTCAGGCATCCGGGTA 61.335 60.000 0.00 0.00 0.00 3.69
2937 6077 2.190578 GGAAGTCAGGCATCCGGG 59.809 66.667 0.00 0.00 0.00 5.73
2938 6078 1.144936 GAGGAAGTCAGGCATCCGG 59.855 63.158 0.00 0.00 39.78 5.14
2939 6079 0.460987 GTGAGGAAGTCAGGCATCCG 60.461 60.000 0.00 0.00 39.78 4.18
2940 6080 0.908198 AGTGAGGAAGTCAGGCATCC 59.092 55.000 0.00 0.00 35.13 3.51
2964 6104 3.250744 TCGACGTTGGCTGAATTAGAAG 58.749 45.455 2.20 0.00 0.00 2.85
2994 6138 4.623932 TTTCTACTCTGCACCAACATCT 57.376 40.909 0.00 0.00 0.00 2.90
3000 6144 5.483937 TCTTATCCTTTTCTACTCTGCACCA 59.516 40.000 0.00 0.00 0.00 4.17
3052 6210 3.969287 TCTGAAGAGGTGGAATGACAG 57.031 47.619 0.00 0.00 0.00 3.51
3053 6211 3.648067 ACTTCTGAAGAGGTGGAATGACA 59.352 43.478 23.36 0.00 32.85 3.58
3054 6212 3.999663 CACTTCTGAAGAGGTGGAATGAC 59.000 47.826 23.36 0.00 45.07 3.06
3055 6213 4.277515 CACTTCTGAAGAGGTGGAATGA 57.722 45.455 23.36 0.00 45.07 2.57
3081 6267 2.371306 CATGTCATCATGTCCAAGGCA 58.629 47.619 0.00 0.00 44.37 4.75
3092 6278 5.476614 CAGTTCTGAGTTCTCATGTCATCA 58.523 41.667 2.89 0.00 0.00 3.07
3214 6400 6.317789 TCATTGCTGACACCTAAAAGAAAG 57.682 37.500 0.00 0.00 0.00 2.62
3269 6662 1.009389 ACGCACAGCTAAAGTCGAGC 61.009 55.000 0.00 0.00 40.42 5.03
3328 6850 7.584122 TTACAACAGCCTAAACCAAATGTAA 57.416 32.000 0.00 0.00 0.00 2.41
3380 6944 4.489249 CGGTGTCGTGGGATACAC 57.511 61.111 0.00 0.00 46.78 2.90
3416 6980 4.522789 AGGGCGTGAGAACAATGTAATTTT 59.477 37.500 0.00 0.00 31.22 1.82
3434 6998 0.248702 GCGAGAGACTCTAAAGGGCG 60.249 60.000 4.57 4.82 0.00 6.13
3457 7077 7.979444 ATTTTCTCCGTCAATTACAAGAAGA 57.021 32.000 0.00 0.00 33.46 2.87
3460 7080 8.500773 GTGTAATTTTCTCCGTCAATTACAAGA 58.499 33.333 14.98 0.00 46.94 3.02
3462 7082 8.155821 TGTGTAATTTTCTCCGTCAATTACAA 57.844 30.769 14.98 6.56 46.94 2.41
3470 7090 6.009115 ACCAAATGTGTAATTTTCTCCGTC 57.991 37.500 0.00 0.00 0.00 4.79
3573 10827 6.851609 TGATGATTTAGGTCCATTCAAAACG 58.148 36.000 0.00 0.00 0.00 3.60
3660 10914 2.932261 TCGAGGACAGCTAGCTGATAA 58.068 47.619 43.42 22.36 46.30 1.75
3661 10915 2.640316 TCGAGGACAGCTAGCTGATA 57.360 50.000 43.42 21.77 46.30 2.15
3676 10934 4.271049 GTGATGGTTCCATAACACATCGAG 59.729 45.833 12.97 0.00 41.40 4.04
3687 10945 0.895530 AGACGACGTGATGGTTCCAT 59.104 50.000 4.58 3.80 0.00 3.41
3737 10995 1.072806 ACACATCTTCTGCTTGCCTCA 59.927 47.619 0.00 0.00 0.00 3.86
3738 10996 1.818642 ACACATCTTCTGCTTGCCTC 58.181 50.000 0.00 0.00 0.00 4.70
3932 11203 8.986477 AAGAAATGCAAAACAATATGGTCTAC 57.014 30.769 0.00 0.00 0.00 2.59
3991 12576 6.843752 TCCTTTGGTGAGGTTTGTTTCTATA 58.156 36.000 0.00 0.00 38.04 1.31
3992 12577 5.701224 TCCTTTGGTGAGGTTTGTTTCTAT 58.299 37.500 0.00 0.00 38.04 1.98
3993 12578 5.118729 TCCTTTGGTGAGGTTTGTTTCTA 57.881 39.130 0.00 0.00 38.04 2.10
3994 12579 3.976015 TCCTTTGGTGAGGTTTGTTTCT 58.024 40.909 0.00 0.00 38.04 2.52
3995 12580 4.081917 TGTTCCTTTGGTGAGGTTTGTTTC 60.082 41.667 0.00 0.00 38.04 2.78
3996 12581 3.835395 TGTTCCTTTGGTGAGGTTTGTTT 59.165 39.130 0.00 0.00 38.04 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.