Multiple sequence alignment - TraesCS7A01G116400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G116400 chr7A 100.000 2327 0 0 1 2327 74597474 74595148 0.000000e+00 4298.0
1 TraesCS7A01G116400 chr7A 90.832 469 28 10 869 1331 70894069 70894528 4.250000e-172 614.0
2 TraesCS7A01G116400 chr7A 90.617 405 31 3 934 1332 74610838 74610435 4.400000e-147 531.0
3 TraesCS7A01G116400 chr7A 92.798 361 19 6 901 1260 71118623 71118977 1.230000e-142 516.0
4 TraesCS7A01G116400 chr7A 88.048 251 22 8 2024 2269 79551353 79551106 8.130000e-75 291.0
5 TraesCS7A01G116400 chr7A 78.468 483 56 23 1865 2325 70780520 70780976 2.950000e-69 272.0
6 TraesCS7A01G116400 chr7A 86.220 254 12 6 1437 1679 79543731 79543490 1.070000e-63 254.0
7 TraesCS7A01G116400 chr7A 79.828 233 32 11 2094 2321 71119719 71119941 3.100000e-34 156.0
8 TraesCS7A01G116400 chr7A 84.783 92 11 2 422 513 719283889 719283801 3.180000e-14 89.8
9 TraesCS7A01G116400 chr7D 84.483 870 70 22 1461 2327 66544239 66545046 0.000000e+00 798.0
10 TraesCS7A01G116400 chr7D 89.942 517 23 13 965 1473 68914082 68913587 7.010000e-180 640.0
11 TraesCS7A01G116400 chr7D 95.330 364 12 2 974 1334 68806005 68805644 7.210000e-160 573.0
12 TraesCS7A01G116400 chr7D 88.008 492 43 10 854 1331 68935298 68934809 3.360000e-158 568.0
13 TraesCS7A01G116400 chr7D 87.805 492 44 10 854 1331 66484629 66485118 1.560000e-156 562.0
14 TraesCS7A01G116400 chr7D 90.428 397 22 14 870 1261 68924283 68923898 2.060000e-140 508.0
15 TraesCS7A01G116400 chr7D 89.896 386 33 3 1943 2327 68911650 68911270 2.080000e-135 492.0
16 TraesCS7A01G116400 chr7D 84.733 262 30 7 2063 2321 66514181 66514435 1.070000e-63 254.0
17 TraesCS7A01G116400 chr7D 79.581 382 37 19 1960 2325 68803608 68803252 3.870000e-58 235.0
18 TraesCS7A01G116400 chr7D 81.188 303 26 14 2029 2325 66515275 66515552 5.040000e-52 215.0
19 TraesCS7A01G116400 chr7D 79.573 328 23 17 1361 1669 75271261 75270959 6.560000e-46 195.0
20 TraesCS7A01G116400 chr7D 75.336 223 49 5 422 642 478767845 478767627 4.090000e-18 102.0
21 TraesCS7A01G116400 chr7D 80.000 135 17 8 385 513 104228042 104227912 8.850000e-15 91.6
22 TraesCS7A01G116400 chr7D 93.220 59 4 0 2167 2225 68804601 68804543 1.150000e-13 87.9
23 TraesCS7A01G116400 chr7B 88.828 546 29 13 977 1513 10174954 10174432 1.950000e-180 641.0
24 TraesCS7A01G116400 chr7B 83.737 578 31 12 1164 1738 8446248 8446765 2.690000e-134 488.0
25 TraesCS7A01G116400 chr7B 91.977 349 26 1 969 1317 10241554 10241208 2.690000e-134 488.0
26 TraesCS7A01G116400 chr7B 91.714 350 25 3 973 1321 7727879 7728225 1.250000e-132 483.0
27 TraesCS7A01G116400 chr7B 90.196 357 27 6 1830 2179 10174275 10173920 2.110000e-125 459.0
28 TraesCS7A01G116400 chr7B 79.327 416 29 30 625 1035 8445880 8446243 2.990000e-59 239.0
29 TraesCS7A01G116400 chr7B 84.836 244 25 8 2087 2325 7558545 7558781 3.870000e-58 235.0
30 TraesCS7A01G116400 chr7B 79.934 304 30 15 1946 2243 9813667 9813389 6.560000e-46 195.0
31 TraesCS7A01G116400 chr7B 79.618 314 29 17 2019 2324 10210641 10210355 2.360000e-45 193.0
32 TraesCS7A01G116400 chr7B 86.826 167 14 4 1625 1791 10174445 10174287 1.840000e-41 180.0
33 TraesCS7A01G116400 chr7B 79.638 221 41 2 3 223 202414672 202414456 3.100000e-34 156.0
34 TraesCS7A01G116400 chr1D 89.247 186 16 2 1 186 156121730 156121549 1.800000e-56 230.0
35 TraesCS7A01G116400 chr1D 84.783 92 11 2 422 513 101105959 101105871 3.180000e-14 89.8
36 TraesCS7A01G116400 chr1A 88.710 186 17 2 1 186 171467424 171467605 8.370000e-55 224.0
37 TraesCS7A01G116400 chr1B 88.172 186 18 2 1 186 250411466 250411285 3.890000e-53 219.0
38 TraesCS7A01G116400 chr1B 78.723 141 19 8 385 518 7541163 7541299 1.480000e-12 84.2
39 TraesCS7A01G116400 chr1B 80.328 122 14 7 385 500 7545422 7545539 1.480000e-12 84.2
40 TraesCS7A01G116400 chr1B 80.328 122 14 7 385 500 7549684 7549801 1.480000e-12 84.2
41 TraesCS7A01G116400 chr4A 83.929 224 32 1 2 225 626635179 626634960 6.510000e-51 211.0
42 TraesCS7A01G116400 chr5A 83.857 223 32 2 1 223 673408242 673408024 2.340000e-50 209.0
43 TraesCS7A01G116400 chr6D 83.412 211 29 3 1 211 1615444 1615648 8.490000e-45 191.0
44 TraesCS7A01G116400 chr5D 81.735 219 36 2 1 219 133316135 133316349 1.840000e-41 180.0
45 TraesCS7A01G116400 chr5D 78.539 219 43 2 1 219 507178391 507178605 8.670000e-30 141.0
46 TraesCS7A01G116400 chr2D 84.694 98 10 4 422 518 57199307 57199214 2.460000e-15 93.5
47 TraesCS7A01G116400 chr4D 83.333 102 11 5 419 518 463463330 463463427 3.180000e-14 89.8
48 TraesCS7A01G116400 chr2A 100.000 31 0 0 250 280 613439294 613439324 8.980000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G116400 chr7A 74595148 74597474 2326 True 4298.000000 4298 100.000000 1 2327 1 chr7A.!!$R1 2326
1 TraesCS7A01G116400 chr7A 71118623 71119941 1318 False 336.000000 516 86.313000 901 2321 2 chr7A.!!$F3 1420
2 TraesCS7A01G116400 chr7D 66544239 66545046 807 False 798.000000 798 84.483000 1461 2327 1 chr7D.!!$F2 866
3 TraesCS7A01G116400 chr7D 68911270 68914082 2812 True 566.000000 640 89.919000 965 2327 2 chr7D.!!$R7 1362
4 TraesCS7A01G116400 chr7D 68803252 68806005 2753 True 298.633333 573 89.377000 974 2325 3 chr7D.!!$R6 1351
5 TraesCS7A01G116400 chr7D 66514181 66515552 1371 False 234.500000 254 82.960500 2029 2325 2 chr7D.!!$F3 296
6 TraesCS7A01G116400 chr7B 10173920 10174954 1034 True 426.666667 641 88.616667 977 2179 3 chr7B.!!$R5 1202
7 TraesCS7A01G116400 chr7B 8445880 8446765 885 False 363.500000 488 81.532000 625 1738 2 chr7B.!!$F3 1113

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
240 241 0.032912 TCATAGTGGCAGGACCGGTA 60.033 55.0 7.34 0.0 43.94 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1518 2880 0.911769 TCGATCCATGAAAGCCACCT 59.088 50.0 0.0 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 7.967890 AAATTTCCAAAGATAGTTTGCAAGG 57.032 32.000 0.00 0.00 0.00 3.61
32 33 5.467035 TTTCCAAAGATAGTTTGCAAGGG 57.533 39.130 0.00 0.00 0.00 3.95
33 34 3.430453 TCCAAAGATAGTTTGCAAGGGG 58.570 45.455 0.00 0.00 0.00 4.79
34 35 2.497273 CCAAAGATAGTTTGCAAGGGGG 59.503 50.000 0.00 0.00 0.00 5.40
36 37 2.808906 AGATAGTTTGCAAGGGGGTC 57.191 50.000 0.00 0.00 0.00 4.46
37 38 1.992557 AGATAGTTTGCAAGGGGGTCA 59.007 47.619 0.00 0.00 0.00 4.02
38 39 2.092323 GATAGTTTGCAAGGGGGTCAC 58.908 52.381 0.00 0.00 0.00 3.67
39 40 1.145571 TAGTTTGCAAGGGGGTCACT 58.854 50.000 0.00 0.75 0.00 3.41
40 41 0.178990 AGTTTGCAAGGGGGTCACTC 60.179 55.000 0.00 0.00 0.00 3.51
41 42 0.467290 GTTTGCAAGGGGGTCACTCA 60.467 55.000 0.00 0.00 0.00 3.41
42 43 0.482446 TTTGCAAGGGGGTCACTCAT 59.518 50.000 0.00 0.00 0.00 2.90
46 47 0.251297 CAAGGGGGTCACTCATGCAA 60.251 55.000 0.00 0.00 0.00 4.08
47 48 0.706433 AAGGGGGTCACTCATGCAAT 59.294 50.000 0.00 0.00 0.00 3.56
51 52 0.729116 GGGTCACTCATGCAATGTCG 59.271 55.000 0.00 0.00 46.80 4.35
55 56 2.086094 TCACTCATGCAATGTCGCAAT 58.914 42.857 0.00 0.00 46.87 3.56
57 58 3.878699 TCACTCATGCAATGTCGCAATAT 59.121 39.130 0.00 0.00 46.87 1.28
59 60 4.439776 CACTCATGCAATGTCGCAATATTG 59.560 41.667 11.27 11.27 46.87 1.90
62 63 4.925789 CATGCAATGTCGCAATATTGGCG 61.926 47.826 17.02 18.52 46.87 5.69
68 69 4.251246 GCAATATTGGCGGGGTGA 57.749 55.556 17.02 0.00 0.00 4.02
69 70 1.733526 GCAATATTGGCGGGGTGAC 59.266 57.895 17.02 0.00 0.00 3.67
70 71 2.021722 CAATATTGGCGGGGTGACG 58.978 57.895 7.62 0.00 0.00 4.35
71 72 0.462937 CAATATTGGCGGGGTGACGA 60.463 55.000 7.62 0.00 35.47 4.20
72 73 0.179056 AATATTGGCGGGGTGACGAG 60.179 55.000 0.00 0.00 35.47 4.18
73 74 2.040009 ATATTGGCGGGGTGACGAGG 62.040 60.000 0.00 0.00 35.47 4.63
77 78 2.428925 GGCGGGGTGACGAGGATAA 61.429 63.158 0.00 0.00 35.47 1.75
79 80 1.440476 CGGGGTGACGAGGATAACC 59.560 63.158 0.00 0.00 35.47 2.85
81 82 0.906775 GGGGTGACGAGGATAACCAA 59.093 55.000 0.00 0.00 38.94 3.67
82 83 1.406477 GGGGTGACGAGGATAACCAAC 60.406 57.143 0.00 0.00 38.94 3.77
83 84 1.636988 GGTGACGAGGATAACCAACG 58.363 55.000 6.99 6.99 41.20 4.10
84 85 1.203052 GGTGACGAGGATAACCAACGA 59.797 52.381 13.48 0.00 39.75 3.85
85 86 2.353011 GGTGACGAGGATAACCAACGAA 60.353 50.000 13.48 1.90 39.75 3.85
86 87 2.921754 GTGACGAGGATAACCAACGAAG 59.078 50.000 13.48 0.00 39.75 3.79
87 88 2.094390 TGACGAGGATAACCAACGAAGG 60.094 50.000 13.48 0.00 39.75 3.46
93 94 3.117888 AGGATAACCAACGAAGGATGCAT 60.118 43.478 0.00 0.00 38.94 3.96
94 95 3.632145 GGATAACCAACGAAGGATGCATT 59.368 43.478 0.00 0.00 35.97 3.56
95 96 4.498009 GGATAACCAACGAAGGATGCATTG 60.498 45.833 0.00 0.00 35.97 2.82
96 97 1.176527 ACCAACGAAGGATGCATTGG 58.823 50.000 10.70 10.70 0.00 3.16
97 98 1.176527 CCAACGAAGGATGCATTGGT 58.823 50.000 0.00 0.00 0.00 3.67
99 100 2.029110 CCAACGAAGGATGCATTGGTTT 60.029 45.455 0.00 0.00 0.00 3.27
101 102 1.067635 ACGAAGGATGCATTGGTTTGC 60.068 47.619 0.00 0.00 43.07 3.68
103 104 2.353011 CGAAGGATGCATTGGTTTGCTT 60.353 45.455 0.00 0.00 43.18 3.91
104 105 2.754946 AGGATGCATTGGTTTGCTTG 57.245 45.000 0.00 0.00 43.18 4.01
106 107 1.002315 GGATGCATTGGTTTGCTTGGT 59.998 47.619 0.00 0.00 43.18 3.67
107 108 2.070783 GATGCATTGGTTTGCTTGGTG 58.929 47.619 0.00 0.00 43.18 4.17
108 109 0.106335 TGCATTGGTTTGCTTGGTGG 59.894 50.000 0.00 0.00 43.18 4.61
109 110 0.392336 GCATTGGTTTGCTTGGTGGA 59.608 50.000 0.00 0.00 39.57 4.02
110 111 1.202627 GCATTGGTTTGCTTGGTGGAA 60.203 47.619 0.00 0.00 39.57 3.53
111 112 2.758009 CATTGGTTTGCTTGGTGGAAG 58.242 47.619 0.00 0.00 34.41 3.46
116 117 2.288395 GGTTTGCTTGGTGGAAGATGTG 60.288 50.000 0.00 0.00 32.82 3.21
117 118 2.362077 GTTTGCTTGGTGGAAGATGTGT 59.638 45.455 0.00 0.00 32.82 3.72
118 119 1.608055 TGCTTGGTGGAAGATGTGTG 58.392 50.000 0.00 0.00 32.82 3.82
120 121 1.956477 GCTTGGTGGAAGATGTGTGTT 59.044 47.619 0.00 0.00 32.82 3.32
121 122 2.030805 GCTTGGTGGAAGATGTGTGTTC 60.031 50.000 0.00 0.00 32.82 3.18
122 123 2.270352 TGGTGGAAGATGTGTGTTCC 57.730 50.000 0.00 0.00 45.57 3.62
124 125 2.976185 TGGTGGAAGATGTGTGTTCCTA 59.024 45.455 6.01 0.00 45.57 2.94
125 126 3.392947 TGGTGGAAGATGTGTGTTCCTAA 59.607 43.478 6.01 0.00 45.57 2.69
127 128 4.003648 GTGGAAGATGTGTGTTCCTAAGG 58.996 47.826 6.01 0.00 45.57 2.69
128 129 3.907474 TGGAAGATGTGTGTTCCTAAGGA 59.093 43.478 6.01 0.00 45.57 3.36
130 131 4.223032 GGAAGATGTGTGTTCCTAAGGAGA 59.777 45.833 0.00 0.00 42.85 3.71
132 133 4.678256 AGATGTGTGTTCCTAAGGAGAGA 58.322 43.478 0.00 0.00 31.21 3.10
133 134 4.709397 AGATGTGTGTTCCTAAGGAGAGAG 59.291 45.833 0.00 0.00 31.21 3.20
136 137 3.445805 GTGTGTTCCTAAGGAGAGAGGAG 59.554 52.174 0.00 0.00 42.80 3.69
137 138 3.028130 GTGTTCCTAAGGAGAGAGGAGG 58.972 54.545 0.00 0.00 42.80 4.30
139 140 1.309876 TCCTAAGGAGAGAGGAGGCA 58.690 55.000 0.00 0.00 36.92 4.75
141 142 1.969923 CCTAAGGAGAGAGGAGGCATG 59.030 57.143 0.00 0.00 34.46 4.06
142 143 1.969923 CTAAGGAGAGAGGAGGCATGG 59.030 57.143 0.00 0.00 0.00 3.66
144 145 1.383803 GGAGAGAGGAGGCATGGGT 60.384 63.158 0.00 0.00 0.00 4.51
145 146 0.985490 GGAGAGAGGAGGCATGGGTT 60.985 60.000 0.00 0.00 0.00 4.11
146 147 0.915364 GAGAGAGGAGGCATGGGTTT 59.085 55.000 0.00 0.00 0.00 3.27
147 148 1.283321 GAGAGAGGAGGCATGGGTTTT 59.717 52.381 0.00 0.00 0.00 2.43
148 149 1.283321 AGAGAGGAGGCATGGGTTTTC 59.717 52.381 0.00 0.00 0.00 2.29
150 151 0.035439 GAGGAGGCATGGGTTTTCGA 60.035 55.000 0.00 0.00 0.00 3.71
152 153 0.035439 GGAGGCATGGGTTTTCGAGA 60.035 55.000 0.00 0.00 0.00 4.04
153 154 1.408822 GGAGGCATGGGTTTTCGAGAT 60.409 52.381 0.00 0.00 0.00 2.75
154 155 2.158813 GGAGGCATGGGTTTTCGAGATA 60.159 50.000 0.00 0.00 0.00 1.98
156 157 4.137543 GAGGCATGGGTTTTCGAGATATT 58.862 43.478 0.00 0.00 0.00 1.28
157 158 4.137543 AGGCATGGGTTTTCGAGATATTC 58.862 43.478 0.00 0.00 0.00 1.75
158 159 3.882888 GGCATGGGTTTTCGAGATATTCA 59.117 43.478 0.00 0.00 0.00 2.57
159 160 4.520492 GGCATGGGTTTTCGAGATATTCAT 59.480 41.667 0.00 0.00 0.00 2.57
160 161 5.705441 GGCATGGGTTTTCGAGATATTCATA 59.295 40.000 0.00 0.00 0.00 2.15
161 162 6.375455 GGCATGGGTTTTCGAGATATTCATAT 59.625 38.462 0.00 0.00 0.00 1.78
162 163 7.552687 GGCATGGGTTTTCGAGATATTCATATA 59.447 37.037 0.00 0.00 0.00 0.86
163 164 9.113838 GCATGGGTTTTCGAGATATTCATATAT 57.886 33.333 0.00 0.00 0.00 0.86
166 167 9.817809 TGGGTTTTCGAGATATTCATATATAGC 57.182 33.333 0.00 0.00 0.00 2.97
181 182 9.917129 TTCATATATAGCTTCAATTTGGCAATG 57.083 29.630 0.00 0.00 0.00 2.82
184 185 2.695359 AGCTTCAATTTGGCAATGCTG 58.305 42.857 4.82 0.00 0.00 4.41
185 186 1.735571 GCTTCAATTTGGCAATGCTGG 59.264 47.619 4.82 0.00 0.00 4.85
193 194 4.775295 GCAATGCTGGCCAAACAA 57.225 50.000 7.01 0.00 0.00 2.83
196 197 2.908916 GCAATGCTGGCCAAACAATAT 58.091 42.857 7.01 0.00 0.00 1.28
197 198 4.057406 GCAATGCTGGCCAAACAATATA 57.943 40.909 7.01 0.00 0.00 0.86
198 199 4.053295 GCAATGCTGGCCAAACAATATAG 58.947 43.478 7.01 0.00 0.00 1.31
199 200 4.624015 CAATGCTGGCCAAACAATATAGG 58.376 43.478 7.01 0.00 0.00 2.57
200 201 3.660970 TGCTGGCCAAACAATATAGGA 57.339 42.857 7.01 0.00 0.00 2.94
201 202 3.554934 TGCTGGCCAAACAATATAGGAG 58.445 45.455 7.01 0.00 0.00 3.69
204 205 4.829492 GCTGGCCAAACAATATAGGAGATT 59.171 41.667 7.01 0.00 0.00 2.40
205 206 5.302823 GCTGGCCAAACAATATAGGAGATTT 59.697 40.000 7.01 0.00 0.00 2.17
207 208 7.177392 GCTGGCCAAACAATATAGGAGATTTAT 59.823 37.037 7.01 0.00 0.00 1.40
208 209 9.082313 CTGGCCAAACAATATAGGAGATTTATT 57.918 33.333 7.01 0.00 0.00 1.40
209 210 8.859090 TGGCCAAACAATATAGGAGATTTATTG 58.141 33.333 0.61 0.00 38.62 1.90
210 211 9.077885 GGCCAAACAATATAGGAGATTTATTGA 57.922 33.333 0.00 0.00 36.99 2.57
230 231 7.944729 ATTGATAATTATGGGTCATAGTGGC 57.055 36.000 1.78 0.00 0.00 5.01
231 232 6.446909 TGATAATTATGGGTCATAGTGGCA 57.553 37.500 1.78 0.00 0.00 4.92
234 235 2.487746 TATGGGTCATAGTGGCAGGA 57.512 50.000 0.00 0.00 0.00 3.86
235 236 0.839946 ATGGGTCATAGTGGCAGGAC 59.160 55.000 0.00 0.00 0.00 3.85
237 238 1.144057 GGTCATAGTGGCAGGACCG 59.856 63.158 10.57 0.00 43.94 4.79
238 239 1.144057 GTCATAGTGGCAGGACCGG 59.856 63.158 0.00 0.00 43.94 5.28
240 241 0.032912 TCATAGTGGCAGGACCGGTA 60.033 55.000 7.34 0.00 43.94 4.02
242 243 1.416401 CATAGTGGCAGGACCGGTAAT 59.584 52.381 7.34 0.00 43.94 1.89
243 244 1.575419 TAGTGGCAGGACCGGTAATT 58.425 50.000 7.34 0.00 43.94 1.40
244 245 1.575419 AGTGGCAGGACCGGTAATTA 58.425 50.000 7.34 0.00 43.94 1.40
245 246 2.124411 AGTGGCAGGACCGGTAATTAT 58.876 47.619 7.34 0.00 43.94 1.28
246 247 2.508300 AGTGGCAGGACCGGTAATTATT 59.492 45.455 7.34 0.00 43.94 1.40
247 248 3.712733 AGTGGCAGGACCGGTAATTATTA 59.287 43.478 7.34 0.00 43.94 0.98
249 250 5.067954 GTGGCAGGACCGGTAATTATTAAT 58.932 41.667 7.34 0.00 43.94 1.40
251 252 6.711645 GTGGCAGGACCGGTAATTATTAATAA 59.288 38.462 7.34 10.27 43.94 1.40
253 254 7.608761 TGGCAGGACCGGTAATTATTAATAATC 59.391 37.037 18.72 9.11 43.94 1.75
273 274 9.826574 AATAATCAAAATGAAGGACATTCCATG 57.173 29.630 0.00 0.00 46.90 3.66
274 275 5.664294 TCAAAATGAAGGACATTCCATGG 57.336 39.130 4.97 4.97 46.90 3.66
275 276 5.085920 TCAAAATGAAGGACATTCCATGGT 58.914 37.500 12.58 0.00 46.90 3.55
276 277 5.047164 TCAAAATGAAGGACATTCCATGGTG 60.047 40.000 12.58 6.19 46.90 4.17
278 279 1.106285 GAAGGACATTCCATGGTGGC 58.894 55.000 12.58 5.53 39.61 5.01
279 280 0.409092 AAGGACATTCCATGGTGGCA 59.591 50.000 12.58 0.00 39.61 4.92
280 281 0.033796 AGGACATTCCATGGTGGCAG 60.034 55.000 12.58 1.39 39.61 4.85
281 282 1.669999 GGACATTCCATGGTGGCAGC 61.670 60.000 12.58 10.30 37.47 5.25
282 283 0.966875 GACATTCCATGGTGGCAGCA 60.967 55.000 22.88 22.88 37.47 4.41
285 286 0.968901 ATTCCATGGTGGCAGCACTG 60.969 55.000 23.12 19.16 37.47 3.66
286 287 3.066190 CCATGGTGGCAGCACTGG 61.066 66.667 23.12 23.48 0.00 4.00
310 311 5.708948 CAGCTATGCTAGAGTCTGATAACC 58.291 45.833 1.86 0.00 36.40 2.85
313 314 6.071447 AGCTATGCTAGAGTCTGATAACCATG 60.071 42.308 1.86 0.00 36.99 3.66
315 316 5.781210 TGCTAGAGTCTGATAACCATGAG 57.219 43.478 1.86 0.00 0.00 2.90
316 317 5.449553 TGCTAGAGTCTGATAACCATGAGA 58.550 41.667 1.86 0.00 0.00 3.27
317 318 6.073981 TGCTAGAGTCTGATAACCATGAGAT 58.926 40.000 1.86 0.00 26.56 2.75
319 320 7.070447 TGCTAGAGTCTGATAACCATGAGATTT 59.930 37.037 1.86 0.00 26.56 2.17
320 321 8.580720 GCTAGAGTCTGATAACCATGAGATTTA 58.419 37.037 1.86 0.00 26.56 1.40
343 344 9.653516 TTTATTGATAATTATGGGTCATGGTGT 57.346 29.630 1.78 0.00 0.00 4.16
345 346 6.259346 TGATAATTATGGGTCATGGTGTCA 57.741 37.500 1.78 0.00 0.00 3.58
355 356 1.382522 CATGGTGTCATGCTGGTACC 58.617 55.000 4.43 4.43 43.44 3.34
357 358 0.767998 TGGTGTCATGCTGGTACCAA 59.232 50.000 17.11 1.69 38.39 3.67
358 359 1.354031 TGGTGTCATGCTGGTACCAAT 59.646 47.619 17.11 4.47 38.39 3.16
359 360 2.017049 GGTGTCATGCTGGTACCAATC 58.983 52.381 17.11 11.22 0.00 2.67
361 362 1.277842 TGTCATGCTGGTACCAATCGT 59.722 47.619 17.11 9.25 0.00 3.73
362 363 1.933853 GTCATGCTGGTACCAATCGTC 59.066 52.381 17.11 3.67 0.00 4.20
364 365 1.665679 CATGCTGGTACCAATCGTCAC 59.334 52.381 17.11 0.41 0.00 3.67
369 370 3.334691 CTGGTACCAATCGTCACACAAT 58.665 45.455 17.11 0.00 0.00 2.71
370 371 4.500127 CTGGTACCAATCGTCACACAATA 58.500 43.478 17.11 0.00 0.00 1.90
371 372 4.247258 TGGTACCAATCGTCACACAATAC 58.753 43.478 13.60 0.00 0.00 1.89
372 373 4.020928 TGGTACCAATCGTCACACAATACT 60.021 41.667 13.60 0.00 0.00 2.12
373 374 4.565564 GGTACCAATCGTCACACAATACTC 59.434 45.833 7.15 0.00 0.00 2.59
374 375 4.537135 ACCAATCGTCACACAATACTCT 57.463 40.909 0.00 0.00 0.00 3.24
375 376 4.495422 ACCAATCGTCACACAATACTCTC 58.505 43.478 0.00 0.00 0.00 3.20
378 379 6.071560 ACCAATCGTCACACAATACTCTCTTA 60.072 38.462 0.00 0.00 0.00 2.10
379 380 6.811665 CCAATCGTCACACAATACTCTCTTAA 59.188 38.462 0.00 0.00 0.00 1.85
380 381 7.201444 CCAATCGTCACACAATACTCTCTTAAC 60.201 40.741 0.00 0.00 0.00 2.01
381 382 5.706916 TCGTCACACAATACTCTCTTAACC 58.293 41.667 0.00 0.00 0.00 2.85
382 383 5.242171 TCGTCACACAATACTCTCTTAACCA 59.758 40.000 0.00 0.00 0.00 3.67
383 384 5.924254 CGTCACACAATACTCTCTTAACCAA 59.076 40.000 0.00 0.00 0.00 3.67
385 386 7.042321 CGTCACACAATACTCTCTTAACCAAAA 60.042 37.037 0.00 0.00 0.00 2.44
386 387 8.784043 GTCACACAATACTCTCTTAACCAAAAT 58.216 33.333 0.00 0.00 0.00 1.82
387 388 8.783093 TCACACAATACTCTCTTAACCAAAATG 58.217 33.333 0.00 0.00 0.00 2.32
389 390 9.349713 ACACAATACTCTCTTAACCAAAATGAA 57.650 29.630 0.00 0.00 0.00 2.57
390 391 9.831737 CACAATACTCTCTTAACCAAAATGAAG 57.168 33.333 0.00 0.00 0.00 3.02
391 392 9.014297 ACAATACTCTCTTAACCAAAATGAAGG 57.986 33.333 0.00 0.00 0.00 3.46
393 394 8.794335 ATACTCTCTTAACCAAAATGAAGGAC 57.206 34.615 0.00 0.00 0.00 3.85
394 395 6.601332 ACTCTCTTAACCAAAATGAAGGACA 58.399 36.000 0.00 0.00 0.00 4.02
395 396 7.234355 ACTCTCTTAACCAAAATGAAGGACAT 58.766 34.615 0.00 0.00 41.45 3.06
397 398 8.110860 TCTCTTAACCAAAATGAAGGACATTC 57.889 34.615 0.00 0.00 46.90 2.67
398 399 7.176690 TCTCTTAACCAAAATGAAGGACATTCC 59.823 37.037 0.00 0.00 46.90 3.01
401 402 8.657387 TTAACCAAAATGAAGGACATTCCATA 57.343 30.769 0.00 0.00 46.90 2.74
402 403 6.780457 ACCAAAATGAAGGACATTCCATAG 57.220 37.500 0.00 0.00 46.90 2.23
403 404 6.256053 ACCAAAATGAAGGACATTCCATAGT 58.744 36.000 0.00 0.00 46.90 2.12
407 408 4.220693 TGAAGGACATTCCATAGTGGTG 57.779 45.455 0.00 0.00 39.61 4.17
408 409 2.717639 AGGACATTCCATAGTGGTGC 57.282 50.000 0.00 0.00 39.61 5.01
409 410 1.134401 AGGACATTCCATAGTGGTGCG 60.134 52.381 0.00 0.00 39.61 5.34
410 411 1.406887 GGACATTCCATAGTGGTGCGT 60.407 52.381 0.00 0.00 39.03 5.24
411 412 1.665679 GACATTCCATAGTGGTGCGTG 59.334 52.381 0.00 0.00 39.03 5.34
413 414 0.253044 ATTCCATAGTGGTGCGTGCT 59.747 50.000 0.00 0.00 39.03 4.40
414 415 0.899019 TTCCATAGTGGTGCGTGCTA 59.101 50.000 0.00 0.00 39.03 3.49
415 416 0.459899 TCCATAGTGGTGCGTGCTAG 59.540 55.000 0.00 0.00 39.03 3.42
416 417 0.459899 CCATAGTGGTGCGTGCTAGA 59.540 55.000 0.00 0.00 31.35 2.43
417 418 1.134818 CCATAGTGGTGCGTGCTAGAA 60.135 52.381 0.00 0.00 31.35 2.10
418 419 2.196749 CATAGTGGTGCGTGCTAGAAG 58.803 52.381 0.00 0.00 0.00 2.85
419 420 1.541379 TAGTGGTGCGTGCTAGAAGA 58.459 50.000 0.00 0.00 0.00 2.87
420 421 0.898320 AGTGGTGCGTGCTAGAAGAT 59.102 50.000 0.00 0.00 0.00 2.40
421 422 1.276421 AGTGGTGCGTGCTAGAAGATT 59.724 47.619 0.00 0.00 0.00 2.40
422 423 1.394917 GTGGTGCGTGCTAGAAGATTG 59.605 52.381 0.00 0.00 0.00 2.67
423 424 1.001974 TGGTGCGTGCTAGAAGATTGT 59.998 47.619 0.00 0.00 0.00 2.71
424 425 1.661112 GGTGCGTGCTAGAAGATTGTC 59.339 52.381 0.00 0.00 0.00 3.18
425 426 1.321743 GTGCGTGCTAGAAGATTGTCG 59.678 52.381 0.00 0.00 0.00 4.35
427 428 2.162809 TGCGTGCTAGAAGATTGTCGTA 59.837 45.455 0.00 0.00 0.00 3.43
428 429 2.784380 GCGTGCTAGAAGATTGTCGTAG 59.216 50.000 0.00 0.00 0.00 3.51
429 430 3.731264 GCGTGCTAGAAGATTGTCGTAGT 60.731 47.826 0.00 0.00 0.00 2.73
430 431 4.495349 GCGTGCTAGAAGATTGTCGTAGTA 60.495 45.833 0.00 0.00 0.00 1.82
431 432 5.749620 CGTGCTAGAAGATTGTCGTAGTAT 58.250 41.667 0.00 0.00 0.00 2.12
432 433 6.200100 CGTGCTAGAAGATTGTCGTAGTATT 58.800 40.000 0.00 0.00 0.00 1.89
433 434 7.350467 CGTGCTAGAAGATTGTCGTAGTATTA 58.650 38.462 0.00 0.00 0.00 0.98
434 435 8.016229 CGTGCTAGAAGATTGTCGTAGTATTAT 58.984 37.037 0.00 0.00 0.00 1.28
435 436 9.332301 GTGCTAGAAGATTGTCGTAGTATTATC 57.668 37.037 0.00 0.00 0.00 1.75
436 437 9.286170 TGCTAGAAGATTGTCGTAGTATTATCT 57.714 33.333 0.00 0.00 0.00 1.98
450 451 8.602328 CGTAGTATTATCTTAGTAGACATCGGG 58.398 40.741 0.00 0.00 31.99 5.14
453 454 9.233649 AGTATTATCTTAGTAGACATCGGGAAG 57.766 37.037 0.00 0.00 31.99 3.46
454 455 6.896021 TTATCTTAGTAGACATCGGGAAGG 57.104 41.667 0.00 0.00 31.99 3.46
455 456 4.515028 TCTTAGTAGACATCGGGAAGGA 57.485 45.455 0.00 0.00 0.00 3.36
456 457 5.063017 TCTTAGTAGACATCGGGAAGGAT 57.937 43.478 0.00 0.00 0.00 3.24
457 458 6.196918 TCTTAGTAGACATCGGGAAGGATA 57.803 41.667 0.00 0.00 0.00 2.59
458 459 6.002704 TCTTAGTAGACATCGGGAAGGATAC 58.997 44.000 0.00 0.00 0.00 2.24
499 500 9.755804 TTAGAGAGTCAAATTATGTAGCTCATG 57.244 33.333 0.00 0.00 37.91 3.07
500 501 7.215789 AGAGAGTCAAATTATGTAGCTCATGG 58.784 38.462 0.00 0.00 37.91 3.66
501 502 6.294473 AGAGTCAAATTATGTAGCTCATGGG 58.706 40.000 0.00 0.00 37.91 4.00
502 503 6.006275 AGTCAAATTATGTAGCTCATGGGT 57.994 37.500 0.00 0.00 37.91 4.51
503 504 6.426587 AGTCAAATTATGTAGCTCATGGGTT 58.573 36.000 0.00 0.00 37.91 4.11
504 505 7.573710 AGTCAAATTATGTAGCTCATGGGTTA 58.426 34.615 0.00 0.00 37.91 2.85
505 506 8.052748 AGTCAAATTATGTAGCTCATGGGTTAA 58.947 33.333 0.00 0.00 37.91 2.01
506 507 8.129211 GTCAAATTATGTAGCTCATGGGTTAAC 58.871 37.037 0.00 0.00 37.91 2.01
507 508 8.052748 TCAAATTATGTAGCTCATGGGTTAACT 58.947 33.333 5.42 0.00 37.91 2.24
508 509 9.337396 CAAATTATGTAGCTCATGGGTTAACTA 57.663 33.333 5.42 0.00 37.91 2.24
510 511 7.907841 TTATGTAGCTCATGGGTTAACTAGA 57.092 36.000 5.42 0.00 37.91 2.43
512 513 6.161855 TGTAGCTCATGGGTTAACTAGATG 57.838 41.667 5.42 5.76 0.00 2.90
513 514 5.897250 TGTAGCTCATGGGTTAACTAGATGA 59.103 40.000 5.42 9.41 0.00 2.92
514 515 5.543507 AGCTCATGGGTTAACTAGATGAG 57.456 43.478 23.53 23.53 41.93 2.90
515 516 5.211973 AGCTCATGGGTTAACTAGATGAGA 58.788 41.667 27.81 11.45 41.68 3.27
516 517 5.069781 AGCTCATGGGTTAACTAGATGAGAC 59.930 44.000 27.81 21.98 41.68 3.36
518 519 4.341235 TCATGGGTTAACTAGATGAGACGG 59.659 45.833 5.42 0.00 0.00 4.79
519 520 3.972133 TGGGTTAACTAGATGAGACGGA 58.028 45.455 5.42 0.00 0.00 4.69
521 522 3.243002 GGGTTAACTAGATGAGACGGACG 60.243 52.174 5.42 0.00 0.00 4.79
522 523 3.243002 GGTTAACTAGATGAGACGGACGG 60.243 52.174 5.42 0.00 0.00 4.79
524 525 2.642154 ACTAGATGAGACGGACGGAT 57.358 50.000 0.00 0.00 0.00 4.18
525 526 3.766068 ACTAGATGAGACGGACGGATA 57.234 47.619 0.00 0.00 0.00 2.59
526 527 4.082665 ACTAGATGAGACGGACGGATAA 57.917 45.455 0.00 0.00 0.00 1.75
527 528 3.814283 ACTAGATGAGACGGACGGATAAC 59.186 47.826 0.00 0.00 0.00 1.89
528 529 1.955080 AGATGAGACGGACGGATAACC 59.045 52.381 0.00 0.00 0.00 2.85
529 530 1.955080 GATGAGACGGACGGATAACCT 59.045 52.381 0.00 0.00 0.00 3.50
530 531 1.843368 TGAGACGGACGGATAACCTT 58.157 50.000 0.00 0.00 0.00 3.50
531 532 2.173519 TGAGACGGACGGATAACCTTT 58.826 47.619 0.00 0.00 0.00 3.11
532 533 2.165030 TGAGACGGACGGATAACCTTTC 59.835 50.000 0.00 0.00 0.00 2.62
534 535 3.624777 AGACGGACGGATAACCTTTCTA 58.375 45.455 0.00 0.00 0.00 2.10
536 537 4.648307 AGACGGACGGATAACCTTTCTATT 59.352 41.667 0.00 0.00 0.00 1.73
537 538 5.128335 AGACGGACGGATAACCTTTCTATTT 59.872 40.000 0.00 0.00 0.00 1.40
538 539 5.114081 ACGGACGGATAACCTTTCTATTTG 58.886 41.667 0.00 0.00 0.00 2.32
539 540 4.510340 CGGACGGATAACCTTTCTATTTGG 59.490 45.833 0.00 0.00 0.00 3.28
540 541 4.820173 GGACGGATAACCTTTCTATTTGGG 59.180 45.833 0.00 0.00 0.00 4.12
541 542 5.397109 GGACGGATAACCTTTCTATTTGGGA 60.397 44.000 0.00 0.00 0.00 4.37
542 543 6.262056 ACGGATAACCTTTCTATTTGGGAT 57.738 37.500 0.00 0.00 0.00 3.85
543 544 6.062095 ACGGATAACCTTTCTATTTGGGATG 58.938 40.000 0.00 0.00 0.00 3.51
544 545 6.126594 ACGGATAACCTTTCTATTTGGGATGA 60.127 38.462 0.00 0.00 0.00 2.92
545 546 6.204882 CGGATAACCTTTCTATTTGGGATGAC 59.795 42.308 0.00 0.00 0.00 3.06
548 549 3.054361 ACCTTTCTATTTGGGATGACGCT 60.054 43.478 0.00 0.00 0.00 5.07
549 550 3.561725 CCTTTCTATTTGGGATGACGCTC 59.438 47.826 0.00 0.00 0.00 5.03
550 551 2.910688 TCTATTTGGGATGACGCTCC 57.089 50.000 0.00 0.00 34.31 4.70
552 553 2.771943 TCTATTTGGGATGACGCTCCTT 59.228 45.455 0.00 0.00 35.50 3.36
553 554 2.044123 ATTTGGGATGACGCTCCTTC 57.956 50.000 0.00 0.00 35.50 3.46
554 555 0.690192 TTTGGGATGACGCTCCTTCA 59.310 50.000 0.00 0.00 35.50 3.02
555 556 0.911769 TTGGGATGACGCTCCTTCAT 59.088 50.000 0.00 0.00 36.37 2.57
556 557 1.788229 TGGGATGACGCTCCTTCATA 58.212 50.000 0.00 0.00 33.70 2.15
557 558 1.412710 TGGGATGACGCTCCTTCATAC 59.587 52.381 0.00 0.00 33.70 2.39
558 559 1.689273 GGGATGACGCTCCTTCATACT 59.311 52.381 0.00 0.00 35.00 2.12
559 560 2.103263 GGGATGACGCTCCTTCATACTT 59.897 50.000 0.00 0.00 35.00 2.24
560 561 3.432326 GGGATGACGCTCCTTCATACTTT 60.432 47.826 0.00 0.00 35.00 2.66
561 562 4.202223 GGGATGACGCTCCTTCATACTTTA 60.202 45.833 0.00 0.00 35.00 1.85
562 563 5.511545 GGGATGACGCTCCTTCATACTTTAT 60.512 44.000 0.00 0.00 35.00 1.40
563 564 5.635700 GGATGACGCTCCTTCATACTTTATC 59.364 44.000 0.00 0.00 33.70 1.75
564 565 4.607955 TGACGCTCCTTCATACTTTATCG 58.392 43.478 0.00 0.00 0.00 2.92
565 566 4.097437 TGACGCTCCTTCATACTTTATCGT 59.903 41.667 0.00 0.00 0.00 3.73
566 567 4.360563 ACGCTCCTTCATACTTTATCGTG 58.639 43.478 0.00 0.00 0.00 4.35
568 569 5.041287 CGCTCCTTCATACTTTATCGTGAA 58.959 41.667 0.00 0.00 0.00 3.18
569 570 5.518847 CGCTCCTTCATACTTTATCGTGAAA 59.481 40.000 0.00 0.00 30.96 2.69
571 572 7.254455 CGCTCCTTCATACTTTATCGTGAAATT 60.254 37.037 0.00 0.00 30.96 1.82
572 573 7.852945 GCTCCTTCATACTTTATCGTGAAATTG 59.147 37.037 0.00 0.00 30.96 2.32
573 574 8.786826 TCCTTCATACTTTATCGTGAAATTGT 57.213 30.769 0.00 0.00 30.96 2.71
582 583 9.577110 ACTTTATCGTGAAATTGTTATAGACGA 57.423 29.630 0.00 0.00 38.57 4.20
619 620 7.496346 TTGATGACTAAAGTATGTCTTCCCT 57.504 36.000 0.00 0.00 36.89 4.20
620 621 8.603898 TTGATGACTAAAGTATGTCTTCCCTA 57.396 34.615 0.00 0.00 36.89 3.53
621 622 8.603898 TGATGACTAAAGTATGTCTTCCCTAA 57.396 34.615 0.00 0.00 36.89 2.69
688 691 3.018840 GCGTAGTTTTCCCACCGCG 62.019 63.158 0.00 0.00 0.00 6.46
689 692 2.865308 GTAGTTTTCCCACCGCGC 59.135 61.111 0.00 0.00 0.00 6.86
690 693 2.739287 TAGTTTTCCCACCGCGCG 60.739 61.111 25.67 25.67 0.00 6.86
714 717 3.988678 ACCAGCCCAGCCAGCAAT 61.989 61.111 0.00 0.00 0.00 3.56
720 723 2.475466 CCCAGCCAGCAATGCGTAG 61.475 63.158 0.00 0.00 0.00 3.51
734 737 2.342478 CGTAGCCTACTAGCCCAGG 58.658 63.158 0.00 0.00 34.85 4.45
751 754 4.481112 GCGGACTGCGGCCATTTG 62.481 66.667 2.24 0.00 34.59 2.32
756 759 1.926511 GACTGCGGCCATTTGGACTG 61.927 60.000 2.24 0.00 42.58 3.51
761 764 3.790223 GCCATTTGGACTGGGCAA 58.210 55.556 0.00 0.00 45.70 4.52
779 782 1.258445 AACAGAATCCGGCTCCGACT 61.258 55.000 10.28 1.26 42.83 4.18
781 784 2.026301 GAATCCGGCTCCGACTCG 59.974 66.667 10.28 0.00 42.83 4.18
782 785 2.439701 AATCCGGCTCCGACTCGA 60.440 61.111 10.28 0.00 42.83 4.04
796 799 2.216488 CGACTCGATCGTTAATGGCTTG 59.784 50.000 15.94 0.00 46.25 4.01
797 800 2.540101 GACTCGATCGTTAATGGCTTGG 59.460 50.000 15.94 0.00 0.00 3.61
804 807 1.668628 CGTTAATGGCTTGGTTGCACC 60.669 52.381 0.00 0.00 39.22 5.01
809 812 3.683937 GCTTGGTTGCACCGCCAT 61.684 61.111 4.88 0.00 42.58 4.40
811 814 1.666209 GCTTGGTTGCACCGCCATAT 61.666 55.000 4.88 0.00 42.58 1.78
812 815 0.817013 CTTGGTTGCACCGCCATATT 59.183 50.000 4.88 0.00 42.58 1.28
813 816 0.814457 TTGGTTGCACCGCCATATTC 59.186 50.000 4.88 0.00 42.58 1.75
814 817 0.322906 TGGTTGCACCGCCATATTCA 60.323 50.000 0.00 0.00 42.58 2.57
815 818 0.100503 GGTTGCACCGCCATATTCAC 59.899 55.000 0.00 0.00 0.00 3.18
817 820 0.034574 TTGCACCGCCATATTCACCT 60.035 50.000 0.00 0.00 0.00 4.00
818 821 0.463654 TGCACCGCCATATTCACCTC 60.464 55.000 0.00 0.00 0.00 3.85
819 822 1.498865 GCACCGCCATATTCACCTCG 61.499 60.000 0.00 0.00 0.00 4.63
820 823 1.227556 ACCGCCATATTCACCTCGC 60.228 57.895 0.00 0.00 0.00 5.03
824 827 1.069703 CGCCATATTCACCTCGCAATG 60.070 52.381 0.00 0.00 0.00 2.82
825 828 1.335324 GCCATATTCACCTCGCAATGC 60.335 52.381 0.00 0.00 0.00 3.56
826 829 1.948834 CCATATTCACCTCGCAATGCA 59.051 47.619 5.91 0.00 0.00 3.96
827 830 2.555325 CCATATTCACCTCGCAATGCAT 59.445 45.455 5.91 0.00 0.00 3.96
828 831 3.752747 CCATATTCACCTCGCAATGCATA 59.247 43.478 5.91 0.00 0.00 3.14
829 832 4.397103 CCATATTCACCTCGCAATGCATAT 59.603 41.667 5.91 0.00 0.00 1.78
831 834 0.946528 TCACCTCGCAATGCATATGC 59.053 50.000 21.09 21.09 40.41 3.14
832 835 0.949397 CACCTCGCAATGCATATGCT 59.051 50.000 27.13 11.10 41.64 3.79
880 883 0.107116 GAGGAGCTGGAGTCGGAGTA 60.107 60.000 0.00 0.00 0.00 2.59
893 896 2.429610 GTCGGAGTAGGCACATCCTTTA 59.570 50.000 0.00 0.00 44.75 1.85
896 899 4.897076 TCGGAGTAGGCACATCCTTTATAA 59.103 41.667 0.00 0.00 44.75 0.98
897 900 5.010719 TCGGAGTAGGCACATCCTTTATAAG 59.989 44.000 0.00 0.00 44.75 1.73
898 901 5.552178 GGAGTAGGCACATCCTTTATAAGG 58.448 45.833 0.00 0.00 44.75 2.69
917 920 2.912025 AGCACGCCCAACCCTTTG 60.912 61.111 0.00 0.00 0.00 2.77
931 934 1.478654 CCCTTTGCCTACCAACACACT 60.479 52.381 0.00 0.00 31.97 3.55
933 936 2.297701 CTTTGCCTACCAACACACTGT 58.702 47.619 0.00 0.00 31.97 3.55
936 939 1.202639 TGCCTACCAACACACTGTCTG 60.203 52.381 0.00 0.00 0.00 3.51
939 942 2.548067 CCTACCAACACACTGTCTGTCC 60.548 54.545 0.00 0.00 0.00 4.02
942 945 2.102588 ACCAACACACTGTCTGTCCTAC 59.897 50.000 0.00 0.00 0.00 3.18
944 947 1.688772 ACACACTGTCTGTCCTACGT 58.311 50.000 0.00 0.00 0.00 3.57
945 948 2.854963 ACACACTGTCTGTCCTACGTA 58.145 47.619 0.00 0.00 0.00 3.57
947 950 1.811359 ACACTGTCTGTCCTACGTAGC 59.189 52.381 17.41 5.19 0.00 3.58
1023 1028 1.073216 CGAAGCGCAAGTCGATGAGT 61.073 55.000 19.49 0.00 37.99 3.41
1432 1471 6.925610 CATTAGCTGAATGTAAGGCTGTTA 57.074 37.500 0.00 0.00 40.21 2.41
1515 2877 4.582656 ACTTCTGATCTTGTCCGATCTAGG 59.417 45.833 0.00 0.00 40.32 3.02
1516 2878 2.887783 TCTGATCTTGTCCGATCTAGGC 59.112 50.000 0.00 0.00 40.32 3.93
1517 2879 2.890311 CTGATCTTGTCCGATCTAGGCT 59.110 50.000 0.00 0.00 40.32 4.58
1518 2880 4.075682 CTGATCTTGTCCGATCTAGGCTA 58.924 47.826 0.00 0.00 40.32 3.93
1519 2881 4.075682 TGATCTTGTCCGATCTAGGCTAG 58.924 47.826 15.56 15.56 40.32 3.42
1655 3029 1.519234 CCTCTGTTGCTGCGCGATA 60.519 57.895 12.10 0.00 0.00 2.92
1684 3058 5.169992 TGATGAGTTCTGATCATGTGGTT 57.830 39.130 0.00 0.00 37.52 3.67
1685 3059 4.939439 TGATGAGTTCTGATCATGTGGTTG 59.061 41.667 0.00 0.00 37.52 3.77
1687 3061 4.572909 TGAGTTCTGATCATGTGGTTGAG 58.427 43.478 0.00 0.00 0.00 3.02
1692 3066 5.488262 TCTGATCATGTGGTTGAGAGAAA 57.512 39.130 0.00 0.00 0.00 2.52
1821 3642 7.509141 TTTGCATGTTCAGAAATCAGAACTA 57.491 32.000 16.40 6.72 41.24 2.24
1859 3680 3.928375 ACAAATTCATTTTCCGCTGATGC 59.072 39.130 0.00 0.00 0.00 3.91
1875 3696 3.968649 TGATGCACTGAAACTTGAAAGC 58.031 40.909 0.00 0.00 0.00 3.51
1881 3702 2.358898 ACTGAAACTTGAAAGCGCACAT 59.641 40.909 11.47 0.00 0.00 3.21
1901 3722 2.235891 TCTAAACTCGAGTGGACTGCA 58.764 47.619 20.85 0.00 0.00 4.41
1902 3723 2.626266 TCTAAACTCGAGTGGACTGCAA 59.374 45.455 20.85 0.00 0.00 4.08
1956 3777 2.099756 GCATGTAAGAGAAATGCACCCC 59.900 50.000 0.00 0.00 44.83 4.95
1964 3988 2.812542 GAAATGCACCCCGAAACGCC 62.813 60.000 0.00 0.00 0.00 5.68
1999 4023 5.351465 CCACAATAAGAACGCAGTCATTACT 59.649 40.000 0.00 0.00 45.00 2.24
2022 4081 5.472148 TGACCGACGTCACTGTATAATTTT 58.528 37.500 17.16 0.00 44.20 1.82
2141 5359 2.820197 CTGCTGGGTTTTCCTCCTAAAC 59.180 50.000 0.00 0.00 40.46 2.01
2142 5360 2.445525 TGCTGGGTTTTCCTCCTAAACT 59.554 45.455 0.00 0.00 40.46 2.66
2143 5361 3.653836 TGCTGGGTTTTCCTCCTAAACTA 59.346 43.478 0.00 0.00 40.46 2.24
2144 5362 4.008330 GCTGGGTTTTCCTCCTAAACTAC 58.992 47.826 0.00 0.00 40.46 2.73
2194 5419 2.110578 TCTCATGTCATCGTGTCCCAT 58.889 47.619 0.00 0.00 32.85 4.00
2225 5450 1.248486 TCTGAAGAGGTGGACTGTCG 58.752 55.000 1.07 0.00 0.00 4.35
2226 5451 1.202891 TCTGAAGAGGTGGACTGTCGA 60.203 52.381 1.07 0.00 0.00 4.20
2269 5495 5.507315 GCTCCTATCTTTCTCTACTCTGCAC 60.507 48.000 0.00 0.00 0.00 4.57
2289 5515 2.682494 ACATCCCGGTACCGCAGT 60.682 61.111 29.15 19.07 38.24 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.487790 CCTTGCAAACTATCTTTGGAAATTTAA 57.512 29.630 0.00 0.00 38.81 1.52
6 7 8.093927 CCCTTGCAAACTATCTTTGGAAATTTA 58.906 33.333 0.00 0.00 38.81 1.40
7 8 6.936335 CCCTTGCAAACTATCTTTGGAAATTT 59.064 34.615 0.00 0.00 38.81 1.82
8 9 6.466812 CCCTTGCAAACTATCTTTGGAAATT 58.533 36.000 0.00 0.00 38.81 1.82
9 10 5.046376 CCCCTTGCAAACTATCTTTGGAAAT 60.046 40.000 0.00 0.00 38.81 2.17
10 11 4.283212 CCCCTTGCAAACTATCTTTGGAAA 59.717 41.667 0.00 0.00 38.81 3.13
11 12 3.831911 CCCCTTGCAAACTATCTTTGGAA 59.168 43.478 0.00 0.70 37.39 3.53
15 16 3.181423 TGACCCCCTTGCAAACTATCTTT 60.181 43.478 0.00 0.00 0.00 2.52
16 17 2.378547 TGACCCCCTTGCAAACTATCTT 59.621 45.455 0.00 0.00 0.00 2.40
17 18 1.992557 TGACCCCCTTGCAAACTATCT 59.007 47.619 0.00 0.00 0.00 1.98
18 19 2.092323 GTGACCCCCTTGCAAACTATC 58.908 52.381 0.00 0.00 0.00 2.08
20 21 1.073284 GAGTGACCCCCTTGCAAACTA 59.927 52.381 0.00 0.00 0.00 2.24
21 22 0.178990 GAGTGACCCCCTTGCAAACT 60.179 55.000 0.00 0.00 0.00 2.66
22 23 0.467290 TGAGTGACCCCCTTGCAAAC 60.467 55.000 0.00 0.00 0.00 2.93
23 24 0.482446 ATGAGTGACCCCCTTGCAAA 59.518 50.000 0.00 0.00 0.00 3.68
24 25 0.251297 CATGAGTGACCCCCTTGCAA 60.251 55.000 0.00 0.00 0.00 4.08
25 26 1.379916 CATGAGTGACCCCCTTGCA 59.620 57.895 0.00 0.00 0.00 4.08
26 27 2.048603 GCATGAGTGACCCCCTTGC 61.049 63.158 0.00 0.00 0.00 4.01
27 28 0.251297 TTGCATGAGTGACCCCCTTG 60.251 55.000 0.00 0.00 0.00 3.61
30 31 0.323725 ACATTGCATGAGTGACCCCC 60.324 55.000 0.00 0.00 0.00 5.40
31 32 1.098050 GACATTGCATGAGTGACCCC 58.902 55.000 0.00 0.00 0.00 4.95
32 33 0.729116 CGACATTGCATGAGTGACCC 59.271 55.000 0.00 0.00 0.00 4.46
33 34 0.097674 GCGACATTGCATGAGTGACC 59.902 55.000 0.00 0.00 34.15 4.02
34 35 0.798159 TGCGACATTGCATGAGTGAC 59.202 50.000 0.00 0.00 40.62 3.67
36 37 2.554806 ATTGCGACATTGCATGAGTG 57.445 45.000 0.00 0.00 45.78 3.51
37 38 4.498513 CCAATATTGCGACATTGCATGAGT 60.499 41.667 10.11 0.00 45.78 3.41
38 39 3.978855 CCAATATTGCGACATTGCATGAG 59.021 43.478 10.11 0.00 45.78 2.90
39 40 3.796165 GCCAATATTGCGACATTGCATGA 60.796 43.478 10.11 0.00 45.78 3.07
40 41 2.473609 GCCAATATTGCGACATTGCATG 59.526 45.455 10.11 0.00 45.78 4.06
41 42 2.746269 GCCAATATTGCGACATTGCAT 58.254 42.857 10.11 0.00 45.78 3.96
42 43 2.206815 GCCAATATTGCGACATTGCA 57.793 45.000 10.11 0.00 44.61 4.08
51 52 1.733526 GTCACCCCGCCAATATTGC 59.266 57.895 10.11 5.03 0.00 3.56
55 56 2.727392 CCTCGTCACCCCGCCAATA 61.727 63.158 0.00 0.00 0.00 1.90
59 60 2.428925 TTATCCTCGTCACCCCGCC 61.429 63.158 0.00 0.00 0.00 6.13
62 63 0.906775 TTGGTTATCCTCGTCACCCC 59.093 55.000 0.00 0.00 34.23 4.95
66 67 2.094390 CCTTCGTTGGTTATCCTCGTCA 60.094 50.000 7.48 0.00 35.09 4.35
67 68 2.165030 TCCTTCGTTGGTTATCCTCGTC 59.835 50.000 7.48 0.00 35.09 4.20
68 69 2.173519 TCCTTCGTTGGTTATCCTCGT 58.826 47.619 7.48 0.00 35.09 4.18
69 70 2.953466 TCCTTCGTTGGTTATCCTCG 57.047 50.000 0.00 0.00 34.95 4.63
70 71 2.872858 GCATCCTTCGTTGGTTATCCTC 59.127 50.000 0.00 0.00 34.23 3.71
71 72 2.238646 TGCATCCTTCGTTGGTTATCCT 59.761 45.455 0.00 0.00 34.23 3.24
72 73 2.639065 TGCATCCTTCGTTGGTTATCC 58.361 47.619 0.00 0.00 0.00 2.59
73 74 4.498009 CCAATGCATCCTTCGTTGGTTATC 60.498 45.833 0.00 0.00 42.67 1.75
75 76 2.752354 CCAATGCATCCTTCGTTGGTTA 59.248 45.455 0.00 0.00 42.67 2.85
77 78 1.176527 CCAATGCATCCTTCGTTGGT 58.823 50.000 0.00 0.00 42.67 3.67
79 80 2.988493 CAAACCAATGCATCCTTCGTTG 59.012 45.455 0.00 0.00 0.00 4.10
81 82 1.067635 GCAAACCAATGCATCCTTCGT 60.068 47.619 0.00 0.00 45.70 3.85
82 83 1.632422 GCAAACCAATGCATCCTTCG 58.368 50.000 0.00 0.00 45.70 3.79
93 94 2.151502 TCTTCCACCAAGCAAACCAA 57.848 45.000 0.00 0.00 31.26 3.67
94 95 1.962807 CATCTTCCACCAAGCAAACCA 59.037 47.619 0.00 0.00 31.26 3.67
95 96 1.963515 ACATCTTCCACCAAGCAAACC 59.036 47.619 0.00 0.00 31.26 3.27
96 97 2.362077 ACACATCTTCCACCAAGCAAAC 59.638 45.455 0.00 0.00 31.26 2.93
97 98 2.361757 CACACATCTTCCACCAAGCAAA 59.638 45.455 0.00 0.00 31.26 3.68
99 100 1.133823 ACACACATCTTCCACCAAGCA 60.134 47.619 0.00 0.00 31.26 3.91
101 102 2.554032 GGAACACACATCTTCCACCAAG 59.446 50.000 0.00 0.00 36.66 3.61
103 104 1.774254 AGGAACACACATCTTCCACCA 59.226 47.619 0.00 0.00 38.81 4.17
104 105 2.568623 AGGAACACACATCTTCCACC 57.431 50.000 0.00 0.00 38.81 4.61
106 107 3.907474 TCCTTAGGAACACACATCTTCCA 59.093 43.478 0.00 0.00 38.81 3.53
107 108 4.223032 TCTCCTTAGGAACACACATCTTCC 59.777 45.833 1.41 0.00 36.88 3.46
108 109 5.186021 TCTCTCCTTAGGAACACACATCTTC 59.814 44.000 1.41 0.00 0.00 2.87
109 110 5.087323 TCTCTCCTTAGGAACACACATCTT 58.913 41.667 1.41 0.00 0.00 2.40
110 111 4.678256 TCTCTCCTTAGGAACACACATCT 58.322 43.478 1.41 0.00 0.00 2.90
111 112 4.142049 CCTCTCTCCTTAGGAACACACATC 60.142 50.000 1.41 0.00 34.58 3.06
116 117 3.028130 CCTCCTCTCTCCTTAGGAACAC 58.972 54.545 1.41 0.00 41.33 3.32
117 118 2.624557 GCCTCCTCTCTCCTTAGGAACA 60.625 54.545 1.41 0.00 41.33 3.18
118 119 2.036387 GCCTCCTCTCTCCTTAGGAAC 58.964 57.143 1.41 0.00 41.33 3.62
120 121 1.309876 TGCCTCCTCTCTCCTTAGGA 58.690 55.000 0.00 0.00 39.63 2.94
121 122 1.969923 CATGCCTCCTCTCTCCTTAGG 59.030 57.143 0.00 0.00 0.00 2.69
122 123 1.969923 CCATGCCTCCTCTCTCCTTAG 59.030 57.143 0.00 0.00 0.00 2.18
124 125 0.693767 CCCATGCCTCCTCTCTCCTT 60.694 60.000 0.00 0.00 0.00 3.36
125 126 1.074623 CCCATGCCTCCTCTCTCCT 60.075 63.158 0.00 0.00 0.00 3.69
127 128 0.915364 AAACCCATGCCTCCTCTCTC 59.085 55.000 0.00 0.00 0.00 3.20
128 129 1.283321 GAAAACCCATGCCTCCTCTCT 59.717 52.381 0.00 0.00 0.00 3.10
130 131 0.035056 CGAAAACCCATGCCTCCTCT 60.035 55.000 0.00 0.00 0.00 3.69
132 133 0.035056 CTCGAAAACCCATGCCTCCT 60.035 55.000 0.00 0.00 0.00 3.69
133 134 0.035439 TCTCGAAAACCCATGCCTCC 60.035 55.000 0.00 0.00 0.00 4.30
136 137 3.882888 TGAATATCTCGAAAACCCATGCC 59.117 43.478 0.00 0.00 0.00 4.40
137 138 5.695851 ATGAATATCTCGAAAACCCATGC 57.304 39.130 0.00 0.00 0.00 4.06
156 157 8.030692 GCATTGCCAAATTGAAGCTATATATGA 58.969 33.333 0.00 0.00 0.00 2.15
157 158 8.033038 AGCATTGCCAAATTGAAGCTATATATG 58.967 33.333 4.70 0.00 0.00 1.78
158 159 8.033038 CAGCATTGCCAAATTGAAGCTATATAT 58.967 33.333 4.70 0.00 0.00 0.86
159 160 7.372714 CAGCATTGCCAAATTGAAGCTATATA 58.627 34.615 4.70 0.00 0.00 0.86
160 161 6.220930 CAGCATTGCCAAATTGAAGCTATAT 58.779 36.000 4.70 0.00 0.00 0.86
161 162 5.452216 CCAGCATTGCCAAATTGAAGCTATA 60.452 40.000 4.70 0.00 0.00 1.31
162 163 4.439057 CAGCATTGCCAAATTGAAGCTAT 58.561 39.130 4.70 0.00 0.00 2.97
163 164 3.368635 CCAGCATTGCCAAATTGAAGCTA 60.369 43.478 4.70 0.00 0.00 3.32
165 166 1.735571 CCAGCATTGCCAAATTGAAGC 59.264 47.619 4.70 0.00 0.00 3.86
166 167 1.735571 GCCAGCATTGCCAAATTGAAG 59.264 47.619 4.70 0.00 0.00 3.02
167 168 1.810959 GCCAGCATTGCCAAATTGAA 58.189 45.000 4.70 0.00 0.00 2.69
176 177 2.383368 TATTGTTTGGCCAGCATTGC 57.617 45.000 5.11 0.00 0.00 3.56
178 179 4.545678 TCCTATATTGTTTGGCCAGCATT 58.454 39.130 5.11 8.60 0.00 3.56
179 180 4.141181 TCTCCTATATTGTTTGGCCAGCAT 60.141 41.667 5.11 0.00 0.00 3.79
180 181 3.201930 TCTCCTATATTGTTTGGCCAGCA 59.798 43.478 5.11 6.78 0.00 4.41
181 182 3.820557 TCTCCTATATTGTTTGGCCAGC 58.179 45.455 5.11 3.69 0.00 4.85
184 185 9.077885 TCAATAAATCTCCTATATTGTTTGGCC 57.922 33.333 0.00 0.00 37.93 5.36
204 205 9.461312 GCCACTATGACCCATAATTATCAATAA 57.539 33.333 0.00 0.00 0.00 1.40
205 206 8.610369 TGCCACTATGACCCATAATTATCAATA 58.390 33.333 0.00 0.00 0.00 1.90
207 208 6.846988 TGCCACTATGACCCATAATTATCAA 58.153 36.000 0.00 0.00 0.00 2.57
208 209 6.446909 TGCCACTATGACCCATAATTATCA 57.553 37.500 0.00 0.00 0.00 2.15
209 210 5.882557 CCTGCCACTATGACCCATAATTATC 59.117 44.000 0.00 0.00 0.00 1.75
210 211 5.551583 TCCTGCCACTATGACCCATAATTAT 59.448 40.000 0.00 0.00 0.00 1.28
211 212 4.910913 TCCTGCCACTATGACCCATAATTA 59.089 41.667 0.00 0.00 0.00 1.40
212 213 3.721575 TCCTGCCACTATGACCCATAATT 59.278 43.478 0.00 0.00 0.00 1.40
213 214 3.073062 GTCCTGCCACTATGACCCATAAT 59.927 47.826 0.00 0.00 0.00 1.28
214 215 2.438021 GTCCTGCCACTATGACCCATAA 59.562 50.000 0.00 0.00 0.00 1.90
217 218 1.271840 GGTCCTGCCACTATGACCCA 61.272 60.000 0.00 0.00 41.14 4.51
218 219 1.527370 GGTCCTGCCACTATGACCC 59.473 63.158 0.00 0.00 41.14 4.46
220 221 1.144057 CCGGTCCTGCCACTATGAC 59.856 63.158 0.00 0.00 36.97 3.06
221 222 0.032912 TACCGGTCCTGCCACTATGA 60.033 55.000 12.40 0.00 36.97 2.15
222 223 0.828022 TTACCGGTCCTGCCACTATG 59.172 55.000 12.40 0.00 36.97 2.23
223 224 1.802553 ATTACCGGTCCTGCCACTAT 58.197 50.000 12.40 0.00 36.97 2.12
225 226 1.575419 TAATTACCGGTCCTGCCACT 58.425 50.000 12.40 0.00 36.97 4.00
227 228 4.774660 TTAATAATTACCGGTCCTGCCA 57.225 40.909 12.40 0.00 36.97 4.92
228 229 7.608761 TGATTATTAATAATTACCGGTCCTGCC 59.391 37.037 12.40 5.34 33.37 4.85
247 248 9.826574 CATGGAATGTCCTTCATTTTGATTATT 57.173 29.630 0.00 0.00 45.49 1.40
249 250 7.399765 ACCATGGAATGTCCTTCATTTTGATTA 59.600 33.333 21.47 0.00 44.81 1.75
251 252 5.722923 ACCATGGAATGTCCTTCATTTTGAT 59.277 36.000 21.47 0.00 44.81 2.57
253 254 5.172934 CACCATGGAATGTCCTTCATTTTG 58.827 41.667 21.47 0.00 44.81 2.44
257 258 2.951787 GCCACCATGGAATGTCCTTCAT 60.952 50.000 21.47 0.00 44.81 2.57
258 259 1.616725 GCCACCATGGAATGTCCTTCA 60.617 52.381 21.47 0.00 44.81 3.02
260 261 0.409092 TGCCACCATGGAATGTCCTT 59.591 50.000 21.47 0.00 44.81 3.36
262 263 1.669999 GCTGCCACCATGGAATGTCC 61.670 60.000 21.47 1.17 44.81 4.02
264 265 1.077086 TGCTGCCACCATGGAATGT 59.923 52.632 21.47 0.00 44.81 2.71
265 266 0.968901 AGTGCTGCCACCATGGAATG 60.969 55.000 21.47 7.12 46.21 2.67
268 269 2.034532 CAGTGCTGCCACCATGGA 59.965 61.111 21.47 0.00 40.96 3.41
269 270 3.066190 CCAGTGCTGCCACCATGG 61.066 66.667 11.19 11.19 43.09 3.66
270 271 3.755628 GCCAGTGCTGCCACCATG 61.756 66.667 0.00 0.00 43.09 3.66
278 279 3.108343 GCATAGCTGCCAGTGCTG 58.892 61.111 12.41 0.00 42.88 4.41
287 288 5.242615 TGGTTATCAGACTCTAGCATAGCTG 59.757 44.000 0.00 0.00 40.10 4.24
288 289 5.389520 TGGTTATCAGACTCTAGCATAGCT 58.610 41.667 0.00 0.00 43.41 3.32
289 290 5.713792 TGGTTATCAGACTCTAGCATAGC 57.286 43.478 0.00 0.00 38.99 2.97
290 291 7.392953 TCTCATGGTTATCAGACTCTAGCATAG 59.607 40.741 0.00 0.00 41.04 2.23
291 292 7.234355 TCTCATGGTTATCAGACTCTAGCATA 58.766 38.462 0.00 0.00 0.00 3.14
293 294 5.449553 TCTCATGGTTATCAGACTCTAGCA 58.550 41.667 0.00 0.00 0.00 3.49
294 295 6.588719 ATCTCATGGTTATCAGACTCTAGC 57.411 41.667 0.00 0.00 0.00 3.42
297 298 9.775854 CAATAAATCTCATGGTTATCAGACTCT 57.224 33.333 0.00 0.00 0.00 3.24
298 299 9.770097 TCAATAAATCTCATGGTTATCAGACTC 57.230 33.333 0.00 0.00 0.00 3.36
317 318 9.653516 ACACCATGACCCATAATTATCAATAAA 57.346 29.630 0.00 0.00 0.00 1.40
319 320 8.443979 TGACACCATGACCCATAATTATCAATA 58.556 33.333 0.00 0.00 0.00 1.90
320 321 7.296856 TGACACCATGACCCATAATTATCAAT 58.703 34.615 0.00 0.00 0.00 2.57
322 323 6.259346 TGACACCATGACCCATAATTATCA 57.741 37.500 0.00 0.00 0.00 2.15
338 339 0.767998 TTGGTACCAGCATGACACCA 59.232 50.000 15.65 0.00 44.46 4.17
340 341 1.665679 CGATTGGTACCAGCATGACAC 59.334 52.381 15.65 1.42 39.69 3.67
341 342 1.277842 ACGATTGGTACCAGCATGACA 59.722 47.619 15.65 0.00 39.69 3.58
342 343 1.933853 GACGATTGGTACCAGCATGAC 59.066 52.381 15.65 3.74 39.69 3.06
343 344 1.552792 TGACGATTGGTACCAGCATGA 59.447 47.619 15.65 0.00 39.69 3.07
345 346 1.277842 TGTGACGATTGGTACCAGCAT 59.722 47.619 15.65 6.75 0.00 3.79
347 348 1.076332 GTGTGACGATTGGTACCAGC 58.924 55.000 15.65 10.53 0.00 4.85
348 349 2.448926 TGTGTGACGATTGGTACCAG 57.551 50.000 15.65 6.38 0.00 4.00
349 350 2.912690 TTGTGTGACGATTGGTACCA 57.087 45.000 11.60 11.60 0.00 3.25
350 351 4.501071 AGTATTGTGTGACGATTGGTACC 58.499 43.478 4.43 4.43 0.00 3.34
351 352 5.408356 AGAGTATTGTGTGACGATTGGTAC 58.592 41.667 0.00 0.00 0.00 3.34
352 353 5.417894 AGAGAGTATTGTGTGACGATTGGTA 59.582 40.000 0.00 0.00 0.00 3.25
354 355 4.748892 AGAGAGTATTGTGTGACGATTGG 58.251 43.478 0.00 0.00 0.00 3.16
355 356 7.201444 GGTTAAGAGAGTATTGTGTGACGATTG 60.201 40.741 0.00 0.00 0.00 2.67
357 358 6.071560 TGGTTAAGAGAGTATTGTGTGACGAT 60.072 38.462 0.00 0.00 0.00 3.73
358 359 5.242171 TGGTTAAGAGAGTATTGTGTGACGA 59.758 40.000 0.00 0.00 0.00 4.20
359 360 5.466819 TGGTTAAGAGAGTATTGTGTGACG 58.533 41.667 0.00 0.00 0.00 4.35
361 362 8.783093 CATTTTGGTTAAGAGAGTATTGTGTGA 58.217 33.333 0.00 0.00 0.00 3.58
362 363 8.783093 TCATTTTGGTTAAGAGAGTATTGTGTG 58.217 33.333 0.00 0.00 0.00 3.82
364 365 9.831737 CTTCATTTTGGTTAAGAGAGTATTGTG 57.168 33.333 0.00 0.00 0.00 3.33
369 370 7.741785 TGTCCTTCATTTTGGTTAAGAGAGTA 58.258 34.615 0.00 0.00 0.00 2.59
370 371 6.601332 TGTCCTTCATTTTGGTTAAGAGAGT 58.399 36.000 0.00 0.00 0.00 3.24
371 372 7.693969 ATGTCCTTCATTTTGGTTAAGAGAG 57.306 36.000 0.00 0.00 32.08 3.20
372 373 7.176690 GGAATGTCCTTCATTTTGGTTAAGAGA 59.823 37.037 0.00 0.00 45.49 3.10
373 374 7.039784 TGGAATGTCCTTCATTTTGGTTAAGAG 60.040 37.037 0.00 0.00 45.49 2.85
374 375 6.780031 TGGAATGTCCTTCATTTTGGTTAAGA 59.220 34.615 0.00 0.00 45.49 2.10
375 376 6.991938 TGGAATGTCCTTCATTTTGGTTAAG 58.008 36.000 0.00 0.00 45.49 1.85
378 379 6.725834 ACTATGGAATGTCCTTCATTTTGGTT 59.274 34.615 0.00 0.00 45.49 3.67
379 380 6.153340 CACTATGGAATGTCCTTCATTTTGGT 59.847 38.462 0.00 0.00 45.49 3.67
380 381 6.406177 CCACTATGGAATGTCCTTCATTTTGG 60.406 42.308 0.00 0.00 45.49 3.28
381 382 6.153340 ACCACTATGGAATGTCCTTCATTTTG 59.847 38.462 0.84 0.00 45.49 2.44
382 383 6.153340 CACCACTATGGAATGTCCTTCATTTT 59.847 38.462 0.84 0.00 45.49 1.82
383 384 5.653769 CACCACTATGGAATGTCCTTCATTT 59.346 40.000 0.84 0.00 45.49 2.32
385 386 4.785301 CACCACTATGGAATGTCCTTCAT 58.215 43.478 0.84 0.00 40.96 2.57
386 387 3.622206 GCACCACTATGGAATGTCCTTCA 60.622 47.826 0.84 0.00 40.96 3.02
387 388 2.945668 GCACCACTATGGAATGTCCTTC 59.054 50.000 0.84 0.00 40.96 3.46
389 390 1.134401 CGCACCACTATGGAATGTCCT 60.134 52.381 0.84 0.00 40.96 3.85
390 391 1.299541 CGCACCACTATGGAATGTCC 58.700 55.000 0.84 0.00 40.96 4.02
391 392 1.665679 CACGCACCACTATGGAATGTC 59.334 52.381 0.84 0.00 40.96 3.06
393 394 0.378257 GCACGCACCACTATGGAATG 59.622 55.000 0.84 0.00 40.96 2.67
394 395 0.253044 AGCACGCACCACTATGGAAT 59.747 50.000 0.84 0.00 40.96 3.01
395 396 0.899019 TAGCACGCACCACTATGGAA 59.101 50.000 0.84 0.00 40.96 3.53
396 397 0.459899 CTAGCACGCACCACTATGGA 59.540 55.000 0.84 0.00 40.96 3.41
397 398 0.459899 TCTAGCACGCACCACTATGG 59.540 55.000 0.00 0.00 45.02 2.74
398 399 2.159240 TCTTCTAGCACGCACCACTATG 60.159 50.000 0.00 0.00 0.00 2.23
401 402 0.898320 ATCTTCTAGCACGCACCACT 59.102 50.000 0.00 0.00 0.00 4.00
402 403 1.394917 CAATCTTCTAGCACGCACCAC 59.605 52.381 0.00 0.00 0.00 4.16
403 404 1.001974 ACAATCTTCTAGCACGCACCA 59.998 47.619 0.00 0.00 0.00 4.17
407 408 1.630148 ACGACAATCTTCTAGCACGC 58.370 50.000 0.00 0.00 0.00 5.34
408 409 4.017380 ACTACGACAATCTTCTAGCACG 57.983 45.455 0.00 0.00 0.00 5.34
409 410 9.332301 GATAATACTACGACAATCTTCTAGCAC 57.668 37.037 0.00 0.00 0.00 4.40
410 411 9.286170 AGATAATACTACGACAATCTTCTAGCA 57.714 33.333 0.00 0.00 0.00 3.49
423 424 9.363763 CCGATGTCTACTAAGATAATACTACGA 57.636 37.037 0.00 0.00 33.30 3.43
424 425 8.602328 CCCGATGTCTACTAAGATAATACTACG 58.398 40.741 0.00 0.00 33.30 3.51
425 426 9.664332 TCCCGATGTCTACTAAGATAATACTAC 57.336 37.037 0.00 0.00 33.30 2.73
427 428 9.233649 CTTCCCGATGTCTACTAAGATAATACT 57.766 37.037 0.00 0.00 33.30 2.12
428 429 8.460428 CCTTCCCGATGTCTACTAAGATAATAC 58.540 40.741 0.00 0.00 33.30 1.89
429 430 8.388589 TCCTTCCCGATGTCTACTAAGATAATA 58.611 37.037 0.00 0.00 33.30 0.98
430 431 7.239438 TCCTTCCCGATGTCTACTAAGATAAT 58.761 38.462 0.00 0.00 33.30 1.28
431 432 6.607970 TCCTTCCCGATGTCTACTAAGATAA 58.392 40.000 0.00 0.00 33.30 1.75
432 433 6.196918 TCCTTCCCGATGTCTACTAAGATA 57.803 41.667 0.00 0.00 33.30 1.98
433 434 5.063017 TCCTTCCCGATGTCTACTAAGAT 57.937 43.478 0.00 0.00 33.30 2.40
434 435 4.515028 TCCTTCCCGATGTCTACTAAGA 57.485 45.455 0.00 0.00 0.00 2.10
435 436 6.005198 AGTATCCTTCCCGATGTCTACTAAG 58.995 44.000 0.00 0.00 0.00 2.18
436 437 5.950023 AGTATCCTTCCCGATGTCTACTAA 58.050 41.667 0.00 0.00 0.00 2.24
437 438 5.579753 AGTATCCTTCCCGATGTCTACTA 57.420 43.478 0.00 0.00 0.00 1.82
438 439 4.456662 AGTATCCTTCCCGATGTCTACT 57.543 45.455 0.00 0.00 0.00 2.57
439 440 5.181622 CAGTAGTATCCTTCCCGATGTCTAC 59.818 48.000 0.00 0.00 34.68 2.59
440 441 5.072736 TCAGTAGTATCCTTCCCGATGTCTA 59.927 44.000 0.00 0.00 0.00 2.59
442 443 4.142790 TCAGTAGTATCCTTCCCGATGTC 58.857 47.826 0.00 0.00 0.00 3.06
443 444 4.145807 CTCAGTAGTATCCTTCCCGATGT 58.854 47.826 0.00 0.00 0.00 3.06
444 445 3.057174 GCTCAGTAGTATCCTTCCCGATG 60.057 52.174 0.00 0.00 0.00 3.84
446 447 2.092049 TGCTCAGTAGTATCCTTCCCGA 60.092 50.000 0.00 0.00 0.00 5.14
448 449 4.965200 AATGCTCAGTAGTATCCTTCCC 57.035 45.455 0.00 0.00 0.00 3.97
457 458 9.800572 TGACTCTCTAATATAATGCTCAGTAGT 57.199 33.333 0.00 0.00 0.00 2.73
473 474 9.755804 CATGAGCTACATAATTTGACTCTCTAA 57.244 33.333 0.00 0.00 37.46 2.10
475 476 7.215789 CCATGAGCTACATAATTTGACTCTCT 58.784 38.462 0.00 0.00 37.46 3.10
476 477 6.426328 CCCATGAGCTACATAATTTGACTCTC 59.574 42.308 0.00 0.00 37.46 3.20
478 479 6.058183 ACCCATGAGCTACATAATTTGACTC 58.942 40.000 0.00 0.00 37.46 3.36
480 481 6.699575 AACCCATGAGCTACATAATTTGAC 57.300 37.500 0.00 0.00 37.46 3.18
481 482 8.052748 AGTTAACCCATGAGCTACATAATTTGA 58.947 33.333 0.88 0.00 37.46 2.69
484 485 8.934697 TCTAGTTAACCCATGAGCTACATAATT 58.065 33.333 0.88 0.00 37.46 1.40
486 487 7.907841 TCTAGTTAACCCATGAGCTACATAA 57.092 36.000 0.88 0.00 37.46 1.90
487 488 7.728532 TCATCTAGTTAACCCATGAGCTACATA 59.271 37.037 0.88 0.00 37.46 2.29
488 489 6.554982 TCATCTAGTTAACCCATGAGCTACAT 59.445 38.462 0.88 0.00 40.17 2.29
491 492 6.265649 GTCTCATCTAGTTAACCCATGAGCTA 59.734 42.308 22.70 11.88 40.16 3.32
492 493 5.069781 GTCTCATCTAGTTAACCCATGAGCT 59.930 44.000 22.70 0.00 40.16 4.09
493 494 5.293560 GTCTCATCTAGTTAACCCATGAGC 58.706 45.833 22.70 17.25 40.16 4.26
494 495 5.508153 CCGTCTCATCTAGTTAACCCATGAG 60.508 48.000 22.04 22.04 41.22 2.90
495 496 4.341235 CCGTCTCATCTAGTTAACCCATGA 59.659 45.833 0.88 6.75 0.00 3.07
496 497 4.341235 TCCGTCTCATCTAGTTAACCCATG 59.659 45.833 0.88 2.58 0.00 3.66
497 498 4.341520 GTCCGTCTCATCTAGTTAACCCAT 59.658 45.833 0.88 0.00 0.00 4.00
498 499 3.698040 GTCCGTCTCATCTAGTTAACCCA 59.302 47.826 0.88 0.00 0.00 4.51
499 500 3.243002 CGTCCGTCTCATCTAGTTAACCC 60.243 52.174 0.88 0.00 0.00 4.11
500 501 3.243002 CCGTCCGTCTCATCTAGTTAACC 60.243 52.174 0.88 0.00 0.00 2.85
501 502 3.624861 TCCGTCCGTCTCATCTAGTTAAC 59.375 47.826 0.00 0.00 0.00 2.01
502 503 3.877559 TCCGTCCGTCTCATCTAGTTAA 58.122 45.455 0.00 0.00 0.00 2.01
503 504 3.548745 TCCGTCCGTCTCATCTAGTTA 57.451 47.619 0.00 0.00 0.00 2.24
504 505 2.414994 TCCGTCCGTCTCATCTAGTT 57.585 50.000 0.00 0.00 0.00 2.24
505 506 2.642154 ATCCGTCCGTCTCATCTAGT 57.358 50.000 0.00 0.00 0.00 2.57
506 507 3.188873 GGTTATCCGTCCGTCTCATCTAG 59.811 52.174 0.00 0.00 0.00 2.43
507 508 3.144506 GGTTATCCGTCCGTCTCATCTA 58.855 50.000 0.00 0.00 0.00 1.98
508 509 1.955080 GGTTATCCGTCCGTCTCATCT 59.045 52.381 0.00 0.00 0.00 2.90
510 511 2.068834 AGGTTATCCGTCCGTCTCAT 57.931 50.000 0.00 0.00 39.05 2.90
512 513 2.426381 AGAAAGGTTATCCGTCCGTCTC 59.574 50.000 0.00 0.00 39.05 3.36
513 514 2.454538 AGAAAGGTTATCCGTCCGTCT 58.545 47.619 0.00 0.00 39.05 4.18
514 515 2.955477 AGAAAGGTTATCCGTCCGTC 57.045 50.000 0.00 0.00 39.05 4.79
515 516 5.114081 CAAATAGAAAGGTTATCCGTCCGT 58.886 41.667 0.00 0.00 39.05 4.69
516 517 4.510340 CCAAATAGAAAGGTTATCCGTCCG 59.490 45.833 0.00 0.00 39.05 4.79
518 519 5.677567 TCCCAAATAGAAAGGTTATCCGTC 58.322 41.667 0.00 0.00 39.05 4.79
519 520 5.703730 TCCCAAATAGAAAGGTTATCCGT 57.296 39.130 0.00 0.00 39.05 4.69
521 522 6.204882 CGTCATCCCAAATAGAAAGGTTATCC 59.795 42.308 0.00 0.00 0.00 2.59
522 523 6.293462 GCGTCATCCCAAATAGAAAGGTTATC 60.293 42.308 0.00 0.00 0.00 1.75
524 525 4.879545 GCGTCATCCCAAATAGAAAGGTTA 59.120 41.667 0.00 0.00 0.00 2.85
525 526 3.694566 GCGTCATCCCAAATAGAAAGGTT 59.305 43.478 0.00 0.00 0.00 3.50
526 527 3.054361 AGCGTCATCCCAAATAGAAAGGT 60.054 43.478 0.00 0.00 0.00 3.50
527 528 3.545703 AGCGTCATCCCAAATAGAAAGG 58.454 45.455 0.00 0.00 0.00 3.11
528 529 3.561725 GGAGCGTCATCCCAAATAGAAAG 59.438 47.826 0.00 0.00 32.79 2.62
529 530 3.199946 AGGAGCGTCATCCCAAATAGAAA 59.800 43.478 0.55 0.00 40.53 2.52
530 531 2.771943 AGGAGCGTCATCCCAAATAGAA 59.228 45.455 0.55 0.00 40.53 2.10
531 532 2.398588 AGGAGCGTCATCCCAAATAGA 58.601 47.619 0.55 0.00 40.53 1.98
532 533 2.918712 AGGAGCGTCATCCCAAATAG 57.081 50.000 0.55 0.00 40.53 1.73
534 535 1.281867 TGAAGGAGCGTCATCCCAAAT 59.718 47.619 0.55 0.00 40.53 2.32
536 537 0.911769 ATGAAGGAGCGTCATCCCAA 59.088 50.000 0.55 0.00 40.53 4.12
537 538 1.412710 GTATGAAGGAGCGTCATCCCA 59.587 52.381 0.00 0.00 40.53 4.37
538 539 1.689273 AGTATGAAGGAGCGTCATCCC 59.311 52.381 0.00 0.00 40.53 3.85
539 540 3.460857 AAGTATGAAGGAGCGTCATCC 57.539 47.619 0.00 0.00 37.01 3.51
540 541 5.343593 CGATAAAGTATGAAGGAGCGTCATC 59.656 44.000 0.00 0.00 37.01 2.92
541 542 5.221263 ACGATAAAGTATGAAGGAGCGTCAT 60.221 40.000 0.00 0.00 39.12 3.06
542 543 4.097437 ACGATAAAGTATGAAGGAGCGTCA 59.903 41.667 0.00 0.00 0.00 4.35
543 544 4.441415 CACGATAAAGTATGAAGGAGCGTC 59.559 45.833 0.00 0.00 0.00 5.19
544 545 4.097437 TCACGATAAAGTATGAAGGAGCGT 59.903 41.667 0.00 0.00 0.00 5.07
545 546 4.607955 TCACGATAAAGTATGAAGGAGCG 58.392 43.478 0.00 0.00 0.00 5.03
548 549 8.786826 ACAATTTCACGATAAAGTATGAAGGA 57.213 30.769 0.00 0.00 32.90 3.36
556 557 9.577110 TCGTCTATAACAATTTCACGATAAAGT 57.423 29.630 0.00 0.00 30.28 2.66
592 593 9.832445 GGGAAGACATACTTTAGTCATCAAATA 57.168 33.333 0.00 0.00 39.13 1.40
593 594 8.552296 AGGGAAGACATACTTTAGTCATCAAAT 58.448 33.333 0.00 0.00 39.13 2.32
594 595 7.918076 AGGGAAGACATACTTTAGTCATCAAA 58.082 34.615 0.00 0.00 39.13 2.69
596 597 8.603898 TTAGGGAAGACATACTTTAGTCATCA 57.396 34.615 0.00 0.00 39.13 3.07
597 598 9.886132 TTTTAGGGAAGACATACTTTAGTCATC 57.114 33.333 0.00 0.00 39.13 2.92
667 670 1.670083 GGTGGGAAAACTACGCGCT 60.670 57.895 5.73 0.00 0.00 5.92
668 671 2.865308 GGTGGGAAAACTACGCGC 59.135 61.111 5.73 0.00 0.00 6.86
699 702 4.143333 GCATTGCTGGCTGGGCTG 62.143 66.667 0.16 0.00 0.00 4.85
702 705 2.438254 TACGCATTGCTGGCTGGG 60.438 61.111 7.12 0.00 0.00 4.45
705 708 1.971505 TAGGCTACGCATTGCTGGCT 61.972 55.000 19.62 19.62 37.33 4.75
708 711 2.398498 CTAGTAGGCTACGCATTGCTG 58.602 52.381 18.41 3.15 0.00 4.41
709 712 1.269831 GCTAGTAGGCTACGCATTGCT 60.270 52.381 18.41 2.48 0.00 3.91
710 713 1.140816 GCTAGTAGGCTACGCATTGC 58.859 55.000 18.41 14.55 0.00 3.56
711 714 1.605712 GGGCTAGTAGGCTACGCATTG 60.606 57.143 21.81 11.80 41.09 2.82
714 717 1.076559 TGGGCTAGTAGGCTACGCA 60.077 57.895 21.81 9.60 41.09 5.24
721 724 2.123425 TCCGCCTGGGCTAGTAGG 60.123 66.667 10.04 3.33 39.32 3.18
722 725 3.130227 GTCCGCCTGGGCTAGTAG 58.870 66.667 10.04 0.00 36.72 2.57
734 737 4.481112 CAAATGGCCGCAGTCCGC 62.481 66.667 0.00 0.00 35.03 5.54
736 739 2.361104 TCCAAATGGCCGCAGTCC 60.361 61.111 0.00 0.00 34.44 3.85
751 754 1.026718 CGGATTCTGTTGCCCAGTCC 61.027 60.000 0.96 1.50 42.19 3.85
756 759 2.044946 AGCCGGATTCTGTTGCCC 60.045 61.111 5.05 0.00 0.00 5.36
760 763 1.218316 GTCGGAGCCGGATTCTGTT 59.782 57.895 5.05 0.00 40.25 3.16
761 764 1.668101 GAGTCGGAGCCGGATTCTGT 61.668 60.000 5.05 0.00 40.25 3.41
779 782 2.675844 CAACCAAGCCATTAACGATCGA 59.324 45.455 24.34 0.00 0.00 3.59
781 784 2.163412 TGCAACCAAGCCATTAACGATC 59.837 45.455 0.00 0.00 0.00 3.69
782 785 2.094752 GTGCAACCAAGCCATTAACGAT 60.095 45.455 0.00 0.00 0.00 3.73
797 800 0.100503 GGTGAATATGGCGGTGCAAC 59.899 55.000 0.00 0.00 0.00 4.17
804 807 1.069703 CATTGCGAGGTGAATATGGCG 60.070 52.381 0.00 0.00 0.00 5.69
809 812 3.189080 GCATATGCATTGCGAGGTGAATA 59.811 43.478 22.84 0.00 41.59 1.75
811 814 1.334556 GCATATGCATTGCGAGGTGAA 59.665 47.619 22.84 0.00 41.59 3.18
812 815 0.946528 GCATATGCATTGCGAGGTGA 59.053 50.000 22.84 0.00 41.59 4.02
813 816 0.949397 AGCATATGCATTGCGAGGTG 59.051 50.000 28.62 1.89 44.82 4.00
814 817 2.549064 TAGCATATGCATTGCGAGGT 57.451 45.000 28.62 7.93 44.82 3.85
815 818 2.477357 GCATAGCATATGCATTGCGAGG 60.477 50.000 28.01 18.90 44.82 4.63
817 820 2.905959 GCATAGCATATGCATTGCGA 57.094 45.000 28.01 17.84 44.82 5.10
858 861 0.681564 TCCGACTCCAGCTCCTCTTC 60.682 60.000 0.00 0.00 0.00 2.87
912 915 1.608590 CAGTGTGTTGGTAGGCAAAGG 59.391 52.381 0.00 0.00 0.00 3.11
917 920 1.202651 ACAGACAGTGTGTTGGTAGGC 60.203 52.381 0.00 0.00 38.28 3.93
931 934 0.809385 GCTGCTACGTAGGACAGACA 59.191 55.000 25.40 13.80 31.67 3.41
933 936 1.472878 CTTGCTGCTACGTAGGACAGA 59.527 52.381 25.40 12.98 31.67 3.41
936 939 1.993370 CAACTTGCTGCTACGTAGGAC 59.007 52.381 23.47 15.22 0.00 3.85
1023 1028 1.078214 CCGCTGAGCCATCTTGGAA 60.078 57.895 0.00 0.00 40.96 3.53
1233 1241 1.228398 TTGGTTGGCCATCTCGCAA 60.228 52.632 6.09 2.89 45.56 4.85
1415 1454 3.941483 CAGGGTAACAGCCTTACATTCAG 59.059 47.826 0.00 0.00 45.25 3.02
1432 1471 1.900486 GTAGCAACAGGTCTACAGGGT 59.100 52.381 0.00 0.00 36.19 4.34
1476 1515 5.674525 TCAGAAGTTCACAACTCATCAGTT 58.325 37.500 5.50 0.00 44.26 3.16
1477 1516 5.282055 TCAGAAGTTCACAACTCATCAGT 57.718 39.130 5.50 0.00 41.91 3.41
1515 2877 2.225467 GATCCATGAAAGCCACCTAGC 58.775 52.381 0.00 0.00 0.00 3.42
1516 2878 2.103094 TCGATCCATGAAAGCCACCTAG 59.897 50.000 0.00 0.00 0.00 3.02
1517 2879 2.115427 TCGATCCATGAAAGCCACCTA 58.885 47.619 0.00 0.00 0.00 3.08
1518 2880 0.911769 TCGATCCATGAAAGCCACCT 59.088 50.000 0.00 0.00 0.00 4.00
1519 2881 1.876156 GATCGATCCATGAAAGCCACC 59.124 52.381 14.76 0.00 0.00 4.61
1607 2981 6.463614 GGACTAGATGCTCCAATCAATACAGT 60.464 42.308 0.00 0.00 0.00 3.55
1608 2982 5.931146 GGACTAGATGCTCCAATCAATACAG 59.069 44.000 0.00 0.00 0.00 2.74
1655 3029 8.837389 CACATGATCAGAACTCATCAATTACAT 58.163 33.333 0.00 0.00 32.76 2.29
1679 3053 8.230486 CACATTACATTAGTTTCTCTCAACCAC 58.770 37.037 0.00 0.00 0.00 4.16
1684 3058 7.386059 TCTGCACATTACATTAGTTTCTCTCA 58.614 34.615 0.00 0.00 0.00 3.27
1685 3059 7.834068 TCTGCACATTACATTAGTTTCTCTC 57.166 36.000 0.00 0.00 0.00 3.20
1687 3061 8.507249 AGTTTCTGCACATTACATTAGTTTCTC 58.493 33.333 0.00 0.00 0.00 2.87
1692 3066 7.106239 AGCTAGTTTCTGCACATTACATTAGT 58.894 34.615 0.00 0.00 0.00 2.24
1784 3573 3.331150 ACATGCAAATGTTCATGGCTTG 58.669 40.909 16.28 16.28 43.11 4.01
1793 3582 6.751157 TCTGATTTCTGAACATGCAAATGTT 58.249 32.000 5.38 5.38 46.37 2.71
1795 3584 7.045725 GTTCTGATTTCTGAACATGCAAATG 57.954 36.000 19.39 0.00 46.98 2.32
1821 3642 5.991606 TGAATTTGTGTTTCGACAGAGATCT 59.008 36.000 0.00 0.00 0.00 2.75
1859 3680 2.111756 GTGCGCTTTCAAGTTTCAGTG 58.888 47.619 9.73 0.00 0.00 3.66
1875 3696 1.920574 CCACTCGAGTTTAGATGTGCG 59.079 52.381 17.26 0.00 0.00 5.34
1881 3702 2.235891 TGCAGTCCACTCGAGTTTAGA 58.764 47.619 17.26 10.47 0.00 2.10
1901 3722 3.066203 CGGTGGTTCTTGCAGTTAGTTTT 59.934 43.478 0.00 0.00 0.00 2.43
1902 3723 2.616842 CGGTGGTTCTTGCAGTTAGTTT 59.383 45.455 0.00 0.00 0.00 2.66
1939 3760 2.396590 TCGGGGTGCATTTCTCTTAC 57.603 50.000 0.00 0.00 0.00 2.34
1956 3777 1.702299 CTGCTACTTCGGCGTTTCG 59.298 57.895 6.85 0.00 0.00 3.46
1964 3988 3.521560 TCTTATTGTGGCTGCTACTTCG 58.478 45.455 17.13 2.18 0.00 3.79
2022 4081 9.052759 GTTCTAAACTTCAGAACCTGTATGAAA 57.947 33.333 4.27 0.00 43.98 2.69
2141 5359 9.950496 AATATTTTGCACTGAGATATAGGGTAG 57.050 33.333 0.00 0.00 0.00 3.18
2142 5360 9.944376 GAATATTTTGCACTGAGATATAGGGTA 57.056 33.333 0.00 0.00 0.00 3.69
2143 5361 8.664079 AGAATATTTTGCACTGAGATATAGGGT 58.336 33.333 0.00 0.00 0.00 4.34
2144 5362 8.944029 CAGAATATTTTGCACTGAGATATAGGG 58.056 37.037 0.00 0.00 0.00 3.53
2194 5419 1.664649 CTTCAGAAGTGTCGCCGCA 60.665 57.895 1.48 0.00 0.00 5.69
2225 5450 2.486042 GACTCCTGACGGTCGCTC 59.514 66.667 3.34 0.00 0.00 5.03
2226 5451 3.063084 GGACTCCTGACGGTCGCT 61.063 66.667 3.34 0.00 33.70 4.93
2249 5475 6.094742 TGTCAGTGCAGAGTAGAGAAAGATAG 59.905 42.308 0.00 0.00 0.00 2.08
2269 5495 2.106332 GCGGTACCGGGATGTCAG 59.894 66.667 33.98 4.83 40.19 3.51
2289 5515 1.810151 GCTAATTCAGCCAACACCGAA 59.190 47.619 0.00 0.00 45.23 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.