Multiple sequence alignment - TraesCS7A01G114000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G114000 chr7A 100.000 2318 0 0 1 2318 70106604 70108921 0.000000e+00 4281.0
1 TraesCS7A01G114000 chr7A 81.423 253 40 5 999 1246 74610774 74610524 1.400000e-47 200.0
2 TraesCS7A01G114000 chr7A 79.216 255 42 7 999 1246 71118716 71118966 1.420000e-37 167.0
3 TraesCS7A01G114000 chr7A 95.122 41 1 1 128 168 620289426 620289387 1.920000e-06 63.9
4 TraesCS7A01G114000 chr2A 95.801 762 32 0 1557 2318 16879806 16879045 0.000000e+00 1230.0
5 TraesCS7A01G114000 chr2A 90.769 65 2 4 1557 1620 745772369 745772430 1.480000e-12 84.2
6 TraesCS7A01G114000 chr2A 84.615 65 10 0 209 273 163675390 163675326 5.350000e-07 65.8
7 TraesCS7A01G114000 chr4B 94.619 762 39 2 1557 2318 500103405 500102646 0.000000e+00 1179.0
8 TraesCS7A01G114000 chr4B 87.500 56 5 1 189 244 20687485 20687432 1.920000e-06 63.9
9 TraesCS7A01G114000 chr3A 94.598 759 39 2 1557 2315 111838083 111838839 0.000000e+00 1173.0
10 TraesCS7A01G114000 chr1A 94.179 773 40 4 1548 2318 257991391 257990622 0.000000e+00 1173.0
11 TraesCS7A01G114000 chr1A 79.130 115 15 7 205 315 578743646 578743537 1.150000e-08 71.3
12 TraesCS7A01G114000 chr6A 94.094 762 41 4 1558 2318 48053669 48052911 0.000000e+00 1155.0
13 TraesCS7A01G114000 chr2B 93.963 762 43 3 1557 2318 465823569 465824327 0.000000e+00 1149.0
14 TraesCS7A01G114000 chr4A 95.423 721 31 2 1592 2312 619151101 619151819 0.000000e+00 1147.0
15 TraesCS7A01G114000 chr4A 93.247 770 42 6 1556 2318 709742121 709742887 0.000000e+00 1125.0
16 TraesCS7A01G114000 chr2D 93.651 756 45 3 1557 2312 557269244 557269996 0.000000e+00 1127.0
17 TraesCS7A01G114000 chr7D 89.895 475 17 18 988 1451 65761935 65762389 1.190000e-162 582.0
18 TraesCS7A01G114000 chr7D 81.496 254 38 8 999 1246 66484783 66485033 1.400000e-47 200.0
19 TraesCS7A01G114000 chr7D 79.447 253 45 5 999 1246 68924160 68923910 3.060000e-39 172.0
20 TraesCS7A01G114000 chr7D 78.824 255 43 8 999 1246 66513514 66513764 6.630000e-36 161.0
21 TraesCS7A01G114000 chr7B 82.492 594 61 34 882 1451 7441065 7441639 4.480000e-132 481.0
22 TraesCS7A01G114000 chr7B 80.233 258 37 10 999 1246 10174932 10174679 5.090000e-42 182.0
23 TraesCS7A01G114000 chr1D 80.784 255 38 8 999 1246 486922473 486922723 3.040000e-44 189.0
24 TraesCS7A01G114000 chr1D 81.651 109 15 4 357 464 398496091 398495987 4.100000e-13 86.1
25 TraesCS7A01G114000 chr5D 100.000 32 0 0 205 236 303720805 303720836 2.490000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G114000 chr7A 70106604 70108921 2317 False 4281 4281 100.000 1 2318 1 chr7A.!!$F1 2317
1 TraesCS7A01G114000 chr2A 16879045 16879806 761 True 1230 1230 95.801 1557 2318 1 chr2A.!!$R1 761
2 TraesCS7A01G114000 chr4B 500102646 500103405 759 True 1179 1179 94.619 1557 2318 1 chr4B.!!$R2 761
3 TraesCS7A01G114000 chr3A 111838083 111838839 756 False 1173 1173 94.598 1557 2315 1 chr3A.!!$F1 758
4 TraesCS7A01G114000 chr1A 257990622 257991391 769 True 1173 1173 94.179 1548 2318 1 chr1A.!!$R1 770
5 TraesCS7A01G114000 chr6A 48052911 48053669 758 True 1155 1155 94.094 1558 2318 1 chr6A.!!$R1 760
6 TraesCS7A01G114000 chr2B 465823569 465824327 758 False 1149 1149 93.963 1557 2318 1 chr2B.!!$F1 761
7 TraesCS7A01G114000 chr4A 619151101 619151819 718 False 1147 1147 95.423 1592 2312 1 chr4A.!!$F1 720
8 TraesCS7A01G114000 chr4A 709742121 709742887 766 False 1125 1125 93.247 1556 2318 1 chr4A.!!$F2 762
9 TraesCS7A01G114000 chr2D 557269244 557269996 752 False 1127 1127 93.651 1557 2312 1 chr2D.!!$F1 755
10 TraesCS7A01G114000 chr7B 7441065 7441639 574 False 481 481 82.492 882 1451 1 chr7B.!!$F1 569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
669 670 0.03582 GTGGGCAGGACCAATTACGA 60.036 55.0 0.0 0.0 43.34 3.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2042 2108 1.00534 CTGACAGATTGGAGAAGCGC 58.995 55.0 0.0 0.0 0.0 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.245419 ACATTTGGCAACTAAACAAATTCAC 57.755 32.000 0.00 0.00 41.41 3.18
26 27 5.957910 TTTGGCAACTAAACAAATTCACG 57.042 34.783 0.00 0.00 37.61 4.35
27 28 3.376540 TGGCAACTAAACAAATTCACGC 58.623 40.909 0.00 0.00 37.61 5.34
28 29 2.403698 GGCAACTAAACAAATTCACGCG 59.596 45.455 3.53 3.53 0.00 6.01
29 30 3.040099 GCAACTAAACAAATTCACGCGT 58.960 40.909 5.58 5.58 0.00 6.01
30 31 3.484285 GCAACTAAACAAATTCACGCGTT 59.516 39.130 10.22 0.00 0.00 4.84
31 32 4.027214 GCAACTAAACAAATTCACGCGTTT 60.027 37.500 10.22 0.00 35.79 3.60
32 33 5.411222 CAACTAAACAAATTCACGCGTTTG 58.589 37.500 10.22 14.87 40.29 2.93
33 34 4.911053 ACTAAACAAATTCACGCGTTTGA 58.089 34.783 23.89 11.51 38.39 2.69
34 35 5.333513 ACTAAACAAATTCACGCGTTTGAA 58.666 33.333 23.89 19.03 39.79 2.69
35 36 5.800941 ACTAAACAAATTCACGCGTTTGAAA 59.199 32.000 23.89 11.12 38.95 2.69
36 37 5.517037 AAACAAATTCACGCGTTTGAAAA 57.483 30.435 23.89 8.86 38.95 2.29
37 38 5.517037 AACAAATTCACGCGTTTGAAAAA 57.483 30.435 23.89 7.26 38.95 1.94
38 39 5.710613 ACAAATTCACGCGTTTGAAAAAT 57.289 30.435 23.89 9.02 38.95 1.82
39 40 6.814076 ACAAATTCACGCGTTTGAAAAATA 57.186 29.167 23.89 0.05 38.95 1.40
40 41 7.401484 ACAAATTCACGCGTTTGAAAAATAT 57.599 28.000 23.89 3.09 38.95 1.28
41 42 8.508800 ACAAATTCACGCGTTTGAAAAATATA 57.491 26.923 23.89 0.00 38.95 0.86
42 43 9.134734 ACAAATTCACGCGTTTGAAAAATATAT 57.865 25.926 23.89 1.80 38.95 0.86
43 44 9.395405 CAAATTCACGCGTTTGAAAAATATATG 57.605 29.630 10.22 0.00 38.95 1.78
44 45 8.682128 AATTCACGCGTTTGAAAAATATATGT 57.318 26.923 10.22 0.00 38.95 2.29
45 46 7.485825 TTCACGCGTTTGAAAAATATATGTG 57.514 32.000 10.22 0.00 32.42 3.21
46 47 6.832804 TCACGCGTTTGAAAAATATATGTGA 58.167 32.000 10.22 0.00 0.00 3.58
47 48 6.739100 TCACGCGTTTGAAAAATATATGTGAC 59.261 34.615 10.22 0.00 0.00 3.67
48 49 6.521477 CACGCGTTTGAAAAATATATGTGACA 59.479 34.615 10.22 0.00 0.00 3.58
49 50 7.218014 CACGCGTTTGAAAAATATATGTGACAT 59.782 33.333 10.22 2.65 0.00 3.06
50 51 7.753132 ACGCGTTTGAAAAATATATGTGACATT 59.247 29.630 5.58 0.00 0.00 2.71
51 52 8.582930 CGCGTTTGAAAAATATATGTGACATTT 58.417 29.630 2.29 0.00 0.00 2.32
67 68 7.254852 TGTGACATTTTCTCAAAAGGTTACAC 58.745 34.615 15.72 12.52 46.97 2.90
68 69 7.094162 TGTGACATTTTCTCAAAAGGTTACACA 60.094 33.333 15.72 14.26 46.97 3.72
69 70 7.432252 GTGACATTTTCTCAAAAGGTTACACAG 59.568 37.037 13.36 0.00 45.21 3.66
70 71 7.122055 TGACATTTTCTCAAAAGGTTACACAGT 59.878 33.333 1.02 0.00 44.39 3.55
71 72 7.257722 ACATTTTCTCAAAAGGTTACACAGTG 58.742 34.615 0.00 0.00 42.04 3.66
72 73 6.827586 TTTTCTCAAAAGGTTACACAGTGT 57.172 33.333 11.87 11.87 0.00 3.55
73 74 7.925043 TTTTCTCAAAAGGTTACACAGTGTA 57.075 32.000 9.51 9.51 0.00 2.90
74 75 7.925043 TTTCTCAAAAGGTTACACAGTGTAA 57.075 32.000 20.32 20.32 40.21 2.41
75 76 7.925043 TTCTCAAAAGGTTACACAGTGTAAA 57.075 32.000 24.75 9.15 43.57 2.01
76 77 8.514330 TTCTCAAAAGGTTACACAGTGTAAAT 57.486 30.769 24.75 15.13 43.57 1.40
77 78 9.616156 TTCTCAAAAGGTTACACAGTGTAAATA 57.384 29.630 24.75 3.70 43.57 1.40
78 79 9.616156 TCTCAAAAGGTTACACAGTGTAAATAA 57.384 29.630 24.75 5.18 43.57 1.40
85 86 9.880157 AGGTTACACAGTGTAAATAATATTCGT 57.120 29.630 24.75 10.64 43.57 3.85
104 105 7.924103 ATTCGTTTAACTGAAAACACATTCC 57.076 32.000 6.50 0.00 38.93 3.01
105 106 6.687081 TCGTTTAACTGAAAACACATTCCT 57.313 33.333 9.70 0.00 38.93 3.36
106 107 7.090953 TCGTTTAACTGAAAACACATTCCTT 57.909 32.000 9.70 0.00 38.93 3.36
107 108 8.211116 TCGTTTAACTGAAAACACATTCCTTA 57.789 30.769 9.70 0.00 38.93 2.69
108 109 8.124199 TCGTTTAACTGAAAACACATTCCTTAC 58.876 33.333 9.70 0.00 38.93 2.34
109 110 7.377662 CGTTTAACTGAAAACACATTCCTTACC 59.622 37.037 9.70 0.00 38.93 2.85
110 111 7.883391 TTAACTGAAAACACATTCCTTACCA 57.117 32.000 0.00 0.00 0.00 3.25
111 112 6.976934 AACTGAAAACACATTCCTTACCAT 57.023 33.333 0.00 0.00 0.00 3.55
112 113 6.976934 ACTGAAAACACATTCCTTACCATT 57.023 33.333 0.00 0.00 0.00 3.16
113 114 6.748132 ACTGAAAACACATTCCTTACCATTG 58.252 36.000 0.00 0.00 0.00 2.82
114 115 6.549364 ACTGAAAACACATTCCTTACCATTGA 59.451 34.615 0.00 0.00 0.00 2.57
115 116 7.069331 ACTGAAAACACATTCCTTACCATTGAA 59.931 33.333 0.00 0.00 0.00 2.69
116 117 7.786030 TGAAAACACATTCCTTACCATTGAAA 58.214 30.769 0.00 0.00 0.00 2.69
117 118 8.260818 TGAAAACACATTCCTTACCATTGAAAA 58.739 29.630 0.00 0.00 0.00 2.29
118 119 9.271828 GAAAACACATTCCTTACCATTGAAAAT 57.728 29.630 0.00 0.00 0.00 1.82
119 120 8.606040 AAACACATTCCTTACCATTGAAAATG 57.394 30.769 0.00 0.00 0.00 2.32
120 121 7.301868 ACACATTCCTTACCATTGAAAATGT 57.698 32.000 0.00 0.00 36.57 2.71
121 122 8.415950 ACACATTCCTTACCATTGAAAATGTA 57.584 30.769 0.00 0.00 34.93 2.29
122 123 9.034800 ACACATTCCTTACCATTGAAAATGTAT 57.965 29.630 0.00 0.00 34.93 2.29
123 124 9.874205 CACATTCCTTACCATTGAAAATGTATT 57.126 29.630 0.00 0.00 34.93 1.89
175 176 8.763049 TCAAAAATATGTTTGTGACAACAACA 57.237 26.923 16.31 5.42 45.91 3.33
176 177 8.651588 TCAAAAATATGTTTGTGACAACAACAC 58.348 29.630 16.31 0.00 45.91 3.32
177 178 8.438513 CAAAAATATGTTTGTGACAACAACACA 58.561 29.630 9.85 4.22 45.91 3.72
178 179 8.715191 AAAATATGTTTGTGACAACAACACAT 57.285 26.923 15.19 15.19 45.91 3.21
179 180 7.928908 AATATGTTTGTGACAACAACACATC 57.071 32.000 14.50 0.00 45.91 3.06
180 181 4.773323 TGTTTGTGACAACAACACATCA 57.227 36.364 0.00 0.00 45.91 3.07
181 182 5.126396 TGTTTGTGACAACAACACATCAA 57.874 34.783 0.00 0.00 45.91 2.57
182 183 4.920340 TGTTTGTGACAACAACACATCAAC 59.080 37.500 0.00 0.00 45.91 3.18
183 184 4.773323 TTGTGACAACAACACATCAACA 57.227 36.364 0.00 0.00 45.52 3.33
184 185 4.090138 TGTGACAACAACACATCAACAC 57.910 40.909 0.00 0.00 42.20 3.32
185 186 3.503748 TGTGACAACAACACATCAACACA 59.496 39.130 0.00 0.00 42.20 3.72
186 187 4.157472 TGTGACAACAACACATCAACACAT 59.843 37.500 0.00 0.00 42.20 3.21
187 188 5.355350 TGTGACAACAACACATCAACACATA 59.645 36.000 0.00 0.00 42.20 2.29
188 189 6.039159 TGTGACAACAACACATCAACACATAT 59.961 34.615 0.00 0.00 42.20 1.78
189 190 6.917477 GTGACAACAACACATCAACACATATT 59.083 34.615 0.00 0.00 38.05 1.28
190 191 7.434897 GTGACAACAACACATCAACACATATTT 59.565 33.333 0.00 0.00 38.05 1.40
191 192 7.434602 TGACAACAACACATCAACACATATTTG 59.565 33.333 0.00 0.00 0.00 2.32
192 193 7.264221 ACAACAACACATCAACACATATTTGT 58.736 30.769 0.00 0.00 36.15 2.83
258 259 9.524106 TCACATAGTTTATACTAATGGTTCGTG 57.476 33.333 0.00 0.00 40.14 4.35
259 260 9.309516 CACATAGTTTATACTAATGGTTCGTGT 57.690 33.333 0.00 0.00 40.14 4.49
260 261 9.525409 ACATAGTTTATACTAATGGTTCGTGTC 57.475 33.333 0.00 0.00 40.14 3.67
261 262 9.745880 CATAGTTTATACTAATGGTTCGTGTCT 57.254 33.333 0.00 0.00 40.14 3.41
264 265 9.498176 AGTTTATACTAATGGTTCGTGTCTTTT 57.502 29.630 0.00 0.00 31.21 2.27
265 266 9.537848 GTTTATACTAATGGTTCGTGTCTTTTG 57.462 33.333 0.00 0.00 0.00 2.44
266 267 9.491675 TTTATACTAATGGTTCGTGTCTTTTGA 57.508 29.630 0.00 0.00 0.00 2.69
267 268 7.972832 ATACTAATGGTTCGTGTCTTTTGAA 57.027 32.000 0.00 0.00 0.00 2.69
268 269 6.687081 ACTAATGGTTCGTGTCTTTTGAAA 57.313 33.333 0.00 0.00 0.00 2.69
269 270 7.090953 ACTAATGGTTCGTGTCTTTTGAAAA 57.909 32.000 0.00 0.00 0.00 2.29
270 271 7.540299 ACTAATGGTTCGTGTCTTTTGAAAAA 58.460 30.769 0.00 0.00 0.00 1.94
526 527 7.716768 TGTATGAAAATTAGACACGTGTTGA 57.283 32.000 24.26 11.10 0.00 3.18
527 528 8.144155 TGTATGAAAATTAGACACGTGTTGAA 57.856 30.769 24.26 19.27 0.00 2.69
528 529 8.613482 TGTATGAAAATTAGACACGTGTTGAAA 58.387 29.630 24.26 16.91 0.00 2.69
529 530 9.440784 GTATGAAAATTAGACACGTGTTGAAAA 57.559 29.630 24.26 14.46 0.00 2.29
578 579 5.514274 AAAAAGAGAGAAACCGATGCAAA 57.486 34.783 0.00 0.00 0.00 3.68
579 580 5.514274 AAAAGAGAGAAACCGATGCAAAA 57.486 34.783 0.00 0.00 0.00 2.44
580 581 5.514274 AAAGAGAGAAACCGATGCAAAAA 57.486 34.783 0.00 0.00 0.00 1.94
598 599 4.722361 AAAAAGCGTTACAAAACAGGGA 57.278 36.364 0.00 0.00 35.16 4.20
599 600 3.982576 AAAGCGTTACAAAACAGGGAG 57.017 42.857 0.00 0.00 35.16 4.30
600 601 2.922740 AGCGTTACAAAACAGGGAGA 57.077 45.000 0.00 0.00 35.16 3.71
601 602 2.767505 AGCGTTACAAAACAGGGAGAG 58.232 47.619 0.00 0.00 35.16 3.20
602 603 2.367567 AGCGTTACAAAACAGGGAGAGA 59.632 45.455 0.00 0.00 35.16 3.10
603 604 3.135994 GCGTTACAAAACAGGGAGAGAA 58.864 45.455 0.00 0.00 35.16 2.87
604 605 3.562557 GCGTTACAAAACAGGGAGAGAAA 59.437 43.478 0.00 0.00 35.16 2.52
605 606 4.554134 GCGTTACAAAACAGGGAGAGAAAC 60.554 45.833 0.00 0.00 35.16 2.78
606 607 4.814771 CGTTACAAAACAGGGAGAGAAACT 59.185 41.667 0.00 0.00 35.16 2.66
607 608 5.296035 CGTTACAAAACAGGGAGAGAAACTT 59.704 40.000 0.00 0.00 35.16 2.66
608 609 6.511282 CGTTACAAAACAGGGAGAGAAACTTC 60.511 42.308 0.00 0.00 35.16 3.01
609 610 4.207955 ACAAAACAGGGAGAGAAACTTCC 58.792 43.478 0.00 0.00 44.52 3.46
613 614 3.444751 GGGAGAGAAACTTCCGAGC 57.555 57.895 0.00 0.00 34.17 5.03
614 615 0.608640 GGGAGAGAAACTTCCGAGCA 59.391 55.000 0.00 0.00 34.17 4.26
615 616 1.404851 GGGAGAGAAACTTCCGAGCAG 60.405 57.143 0.00 0.00 34.17 4.24
616 617 1.355005 GAGAGAAACTTCCGAGCAGC 58.645 55.000 0.00 0.00 0.00 5.25
617 618 0.972883 AGAGAAACTTCCGAGCAGCT 59.027 50.000 0.00 0.00 0.00 4.24
618 619 2.164624 GAGAGAAACTTCCGAGCAGCTA 59.835 50.000 0.00 0.00 0.00 3.32
619 620 2.763448 AGAGAAACTTCCGAGCAGCTAT 59.237 45.455 0.00 0.00 0.00 2.97
620 621 3.954904 AGAGAAACTTCCGAGCAGCTATA 59.045 43.478 0.00 0.00 0.00 1.31
621 622 4.037446 AGAGAAACTTCCGAGCAGCTATAG 59.963 45.833 0.00 0.00 0.00 1.31
622 623 3.702045 AGAAACTTCCGAGCAGCTATAGT 59.298 43.478 0.00 0.00 0.00 2.12
623 624 4.888239 AGAAACTTCCGAGCAGCTATAGTA 59.112 41.667 0.00 0.00 0.00 1.82
624 625 5.536916 AGAAACTTCCGAGCAGCTATAGTAT 59.463 40.000 0.00 0.00 0.00 2.12
625 626 5.793030 AACTTCCGAGCAGCTATAGTATT 57.207 39.130 0.00 0.00 0.00 1.89
626 627 5.127693 ACTTCCGAGCAGCTATAGTATTG 57.872 43.478 0.00 0.00 0.00 1.90
627 628 4.021894 ACTTCCGAGCAGCTATAGTATTGG 60.022 45.833 0.00 0.00 0.00 3.16
628 629 2.826128 TCCGAGCAGCTATAGTATTGGG 59.174 50.000 0.00 0.00 0.00 4.12
629 630 2.611518 CGAGCAGCTATAGTATTGGGC 58.388 52.381 0.00 0.00 0.00 5.36
630 631 2.232452 CGAGCAGCTATAGTATTGGGCT 59.768 50.000 0.00 2.16 0.00 5.19
634 635 3.931578 CAGCTATAGTATTGGGCTGTCC 58.068 50.000 17.10 0.00 43.44 4.02
663 664 4.641645 CGCTGTGGGCAGGACCAA 62.642 66.667 0.00 0.00 43.34 3.67
664 665 2.036256 GCTGTGGGCAGGACCAAT 59.964 61.111 0.00 0.00 43.34 3.16
665 666 1.607467 GCTGTGGGCAGGACCAATT 60.607 57.895 0.00 0.00 43.34 2.32
666 667 0.323360 GCTGTGGGCAGGACCAATTA 60.323 55.000 0.00 0.00 43.34 1.40
667 668 1.463674 CTGTGGGCAGGACCAATTAC 58.536 55.000 0.00 0.00 43.34 1.89
668 669 0.322098 TGTGGGCAGGACCAATTACG 60.322 55.000 0.00 0.00 43.34 3.18
669 670 0.035820 GTGGGCAGGACCAATTACGA 60.036 55.000 0.00 0.00 43.34 3.43
670 671 0.035820 TGGGCAGGACCAATTACGAC 60.036 55.000 0.00 0.00 42.05 4.34
671 672 0.252197 GGGCAGGACCAATTACGACT 59.748 55.000 0.00 0.00 42.05 4.18
672 673 1.653151 GGCAGGACCAATTACGACTC 58.347 55.000 0.00 0.00 38.86 3.36
673 674 1.278238 GCAGGACCAATTACGACTCG 58.722 55.000 0.00 0.00 0.00 4.18
674 675 1.278238 CAGGACCAATTACGACTCGC 58.722 55.000 0.00 0.00 0.00 5.03
675 676 0.892755 AGGACCAATTACGACTCGCA 59.107 50.000 0.00 0.00 0.00 5.10
676 677 1.135083 AGGACCAATTACGACTCGCAG 60.135 52.381 0.00 0.00 0.00 5.18
677 678 0.645868 GACCAATTACGACTCGCAGC 59.354 55.000 0.00 0.00 0.00 5.25
678 679 0.037697 ACCAATTACGACTCGCAGCA 60.038 50.000 0.00 0.00 0.00 4.41
679 680 0.647410 CCAATTACGACTCGCAGCAG 59.353 55.000 0.00 0.00 0.00 4.24
680 681 0.647410 CAATTACGACTCGCAGCAGG 59.353 55.000 0.00 0.00 0.00 4.85
681 682 1.084370 AATTACGACTCGCAGCAGGC 61.084 55.000 0.00 0.00 39.90 4.85
691 692 1.645997 GCAGCAGGCGAGAAATAGC 59.354 57.895 0.00 0.00 0.00 2.97
692 693 1.091771 GCAGCAGGCGAGAAATAGCA 61.092 55.000 0.00 0.00 34.54 3.49
693 694 1.590932 CAGCAGGCGAGAAATAGCAT 58.409 50.000 0.00 0.00 34.54 3.79
694 695 1.945394 CAGCAGGCGAGAAATAGCATT 59.055 47.619 0.00 0.00 34.54 3.56
695 696 2.357009 CAGCAGGCGAGAAATAGCATTT 59.643 45.455 0.00 0.00 34.54 2.32
696 697 3.019564 AGCAGGCGAGAAATAGCATTTT 58.980 40.909 0.00 0.00 34.54 1.82
697 698 3.065925 AGCAGGCGAGAAATAGCATTTTC 59.934 43.478 3.83 3.83 36.13 2.29
698 699 3.611517 CAGGCGAGAAATAGCATTTTCG 58.388 45.455 5.93 5.85 39.93 3.46
699 700 3.063997 CAGGCGAGAAATAGCATTTTCGT 59.936 43.478 10.11 0.06 39.93 3.85
700 701 4.270084 CAGGCGAGAAATAGCATTTTCGTA 59.730 41.667 10.11 0.00 39.93 3.43
701 702 4.508124 AGGCGAGAAATAGCATTTTCGTAG 59.492 41.667 10.11 5.93 39.93 3.51
702 703 4.270325 GGCGAGAAATAGCATTTTCGTAGT 59.730 41.667 10.11 0.00 39.93 2.73
703 704 5.461078 GGCGAGAAATAGCATTTTCGTAGTA 59.539 40.000 10.11 0.00 39.93 1.82
704 705 6.019318 GGCGAGAAATAGCATTTTCGTAGTAA 60.019 38.462 10.11 0.00 39.93 2.24
705 706 6.839796 GCGAGAAATAGCATTTTCGTAGTAAC 59.160 38.462 10.11 0.00 39.93 2.50
706 707 7.463648 GCGAGAAATAGCATTTTCGTAGTAACA 60.464 37.037 10.11 0.00 39.93 2.41
707 708 8.377681 CGAGAAATAGCATTTTCGTAGTAACAA 58.622 33.333 5.93 0.00 39.93 2.83
708 709 9.690434 GAGAAATAGCATTTTCGTAGTAACAAG 57.310 33.333 5.93 0.00 39.93 3.16
709 710 8.665685 AGAAATAGCATTTTCGTAGTAACAAGG 58.334 33.333 5.93 0.00 39.93 3.61
710 711 4.680171 AGCATTTTCGTAGTAACAAGGC 57.320 40.909 0.00 0.00 0.00 4.35
711 712 3.439129 AGCATTTTCGTAGTAACAAGGCC 59.561 43.478 0.00 0.00 0.00 5.19
712 713 3.439129 GCATTTTCGTAGTAACAAGGCCT 59.561 43.478 0.00 0.00 0.00 5.19
713 714 4.632688 GCATTTTCGTAGTAACAAGGCCTA 59.367 41.667 5.16 0.00 0.00 3.93
714 715 5.296035 GCATTTTCGTAGTAACAAGGCCTAT 59.704 40.000 5.16 0.00 0.00 2.57
715 716 6.715464 CATTTTCGTAGTAACAAGGCCTATG 58.285 40.000 5.16 9.65 0.00 2.23
716 717 5.664294 TTTCGTAGTAACAAGGCCTATGA 57.336 39.130 5.16 0.00 0.00 2.15
717 718 5.864418 TTCGTAGTAACAAGGCCTATGAT 57.136 39.130 5.16 4.27 29.43 2.45
718 719 6.964807 TTCGTAGTAACAAGGCCTATGATA 57.035 37.500 5.16 3.22 29.43 2.15
719 720 7.534723 TTCGTAGTAACAAGGCCTATGATAT 57.465 36.000 5.16 0.00 29.43 1.63
720 721 6.920817 TCGTAGTAACAAGGCCTATGATATG 58.079 40.000 5.16 0.87 0.00 1.78
721 722 6.071560 TCGTAGTAACAAGGCCTATGATATGG 60.072 42.308 5.16 0.00 0.00 2.74
722 723 6.295123 CGTAGTAACAAGGCCTATGATATGGT 60.295 42.308 5.16 0.00 0.00 3.55
723 724 6.515512 AGTAACAAGGCCTATGATATGGTT 57.484 37.500 5.16 3.61 0.00 3.67
724 725 7.626999 AGTAACAAGGCCTATGATATGGTTA 57.373 36.000 5.16 2.64 0.00 2.85
725 726 8.219660 AGTAACAAGGCCTATGATATGGTTAT 57.780 34.615 5.16 0.00 0.00 1.89
726 727 9.333961 AGTAACAAGGCCTATGATATGGTTATA 57.666 33.333 5.16 0.00 0.00 0.98
727 728 9.953565 GTAACAAGGCCTATGATATGGTTATAA 57.046 33.333 5.16 0.00 0.00 0.98
729 730 8.449423 ACAAGGCCTATGATATGGTTATAAGA 57.551 34.615 5.16 0.00 0.00 2.10
730 731 8.322091 ACAAGGCCTATGATATGGTTATAAGAC 58.678 37.037 5.16 0.00 0.00 3.01
731 732 7.439108 AGGCCTATGATATGGTTATAAGACC 57.561 40.000 1.29 0.00 40.23 3.85
732 733 7.199765 AGGCCTATGATATGGTTATAAGACCT 58.800 38.462 1.29 0.00 40.47 3.85
733 734 7.684619 AGGCCTATGATATGGTTATAAGACCTT 59.315 37.037 1.29 0.00 40.47 3.50
734 735 8.329502 GGCCTATGATATGGTTATAAGACCTTT 58.670 37.037 0.00 0.00 40.47 3.11
735 736 9.167311 GCCTATGATATGGTTATAAGACCTTTG 57.833 37.037 0.00 0.00 40.47 2.77
736 737 9.672673 CCTATGATATGGTTATAAGACCTTTGG 57.327 37.037 0.00 0.00 40.47 3.28
737 738 9.672673 CTATGATATGGTTATAAGACCTTTGGG 57.327 37.037 0.00 0.00 40.47 4.12
738 739 6.303839 TGATATGGTTATAAGACCTTTGGGC 58.696 40.000 0.00 0.00 40.47 5.36
739 740 4.601406 ATGGTTATAAGACCTTTGGGCA 57.399 40.909 0.00 0.00 40.47 5.36
740 741 4.390129 TGGTTATAAGACCTTTGGGCAA 57.610 40.909 0.00 0.00 40.47 4.52
741 742 4.742012 TGGTTATAAGACCTTTGGGCAAA 58.258 39.130 0.00 0.00 40.47 3.68
742 743 5.337788 TGGTTATAAGACCTTTGGGCAAAT 58.662 37.500 0.00 0.00 40.47 2.32
743 744 5.782845 TGGTTATAAGACCTTTGGGCAAATT 59.217 36.000 0.00 0.00 40.47 1.82
744 745 6.071051 TGGTTATAAGACCTTTGGGCAAATTC 60.071 38.462 0.00 0.00 40.47 2.17
745 746 6.154534 GGTTATAAGACCTTTGGGCAAATTCT 59.845 38.462 0.00 0.00 36.73 2.40
746 747 5.921962 ATAAGACCTTTGGGCAAATTCTC 57.078 39.130 0.00 0.00 35.63 2.87
747 748 3.243359 AGACCTTTGGGCAAATTCTCA 57.757 42.857 0.00 0.00 35.63 3.27
748 749 3.160269 AGACCTTTGGGCAAATTCTCAG 58.840 45.455 0.00 0.00 35.63 3.35
749 750 3.157087 GACCTTTGGGCAAATTCTCAGA 58.843 45.455 0.00 0.00 35.63 3.27
750 751 3.573967 GACCTTTGGGCAAATTCTCAGAA 59.426 43.478 0.00 0.00 35.63 3.02
751 752 3.321968 ACCTTTGGGCAAATTCTCAGAAC 59.678 43.478 0.00 0.00 35.63 3.01
752 753 3.568538 CTTTGGGCAAATTCTCAGAACG 58.431 45.455 0.00 0.00 0.00 3.95
753 754 1.533625 TGGGCAAATTCTCAGAACGG 58.466 50.000 0.00 0.00 0.00 4.44
754 755 0.811281 GGGCAAATTCTCAGAACGGG 59.189 55.000 0.00 0.00 0.00 5.28
755 756 0.171231 GGCAAATTCTCAGAACGGGC 59.829 55.000 0.00 0.00 0.00 6.13
756 757 0.171231 GCAAATTCTCAGAACGGGCC 59.829 55.000 0.00 0.00 0.00 5.80
757 758 1.826385 CAAATTCTCAGAACGGGCCT 58.174 50.000 0.84 0.00 0.00 5.19
758 759 1.470098 CAAATTCTCAGAACGGGCCTG 59.530 52.381 11.02 11.02 0.00 4.85
759 760 0.693049 AATTCTCAGAACGGGCCTGT 59.307 50.000 12.85 12.85 33.57 4.00
760 761 0.693049 ATTCTCAGAACGGGCCTGTT 59.307 50.000 30.26 30.26 33.57 3.16
761 762 0.472471 TTCTCAGAACGGGCCTGTTT 59.528 50.000 30.36 17.22 33.57 2.83
762 763 0.250295 TCTCAGAACGGGCCTGTTTG 60.250 55.000 30.36 25.98 33.57 2.93
763 764 1.228124 TCAGAACGGGCCTGTTTGG 60.228 57.895 30.36 23.58 39.35 3.28
764 765 2.115266 AGAACGGGCCTGTTTGGG 59.885 61.111 30.36 0.47 36.00 4.12
771 772 3.790223 GCCTGTTTGGGCCATGAA 58.210 55.556 7.26 0.00 45.92 2.57
772 773 1.293179 GCCTGTTTGGGCCATGAAC 59.707 57.895 7.26 10.94 45.92 3.18
773 774 1.470996 GCCTGTTTGGGCCATGAACA 61.471 55.000 19.76 19.76 45.92 3.18
774 775 1.269012 CCTGTTTGGGCCATGAACAT 58.731 50.000 20.87 0.00 33.31 2.71
775 776 1.205417 CCTGTTTGGGCCATGAACATC 59.795 52.381 20.87 0.80 33.31 3.06
776 777 0.887247 TGTTTGGGCCATGAACATCG 59.113 50.000 17.66 0.00 0.00 3.84
777 778 1.173043 GTTTGGGCCATGAACATCGA 58.827 50.000 7.26 0.00 0.00 3.59
778 779 1.750778 GTTTGGGCCATGAACATCGAT 59.249 47.619 7.26 0.00 0.00 3.59
779 780 1.391577 TTGGGCCATGAACATCGATG 58.608 50.000 23.68 23.68 0.00 3.84
780 781 1.102809 TGGGCCATGAACATCGATGC 61.103 55.000 25.11 10.54 0.00 3.91
781 782 1.102809 GGGCCATGAACATCGATGCA 61.103 55.000 25.11 15.97 0.00 3.96
782 783 0.309922 GGCCATGAACATCGATGCAG 59.690 55.000 25.11 10.22 0.00 4.41
783 784 0.309922 GCCATGAACATCGATGCAGG 59.690 55.000 25.11 18.69 0.00 4.85
784 785 0.309922 CCATGAACATCGATGCAGGC 59.690 55.000 25.11 12.09 0.00 4.85
785 786 0.309922 CATGAACATCGATGCAGGCC 59.690 55.000 25.11 10.15 0.00 5.19
786 787 1.162181 ATGAACATCGATGCAGGCCG 61.162 55.000 25.11 0.00 0.00 6.13
787 788 1.521457 GAACATCGATGCAGGCCGA 60.521 57.895 25.11 10.33 39.25 5.54
788 789 1.766143 GAACATCGATGCAGGCCGAC 61.766 60.000 25.11 4.48 37.64 4.79
789 790 2.202919 CATCGATGCAGGCCGACA 60.203 61.111 13.37 0.00 37.64 4.35
790 791 2.202932 ATCGATGCAGGCCGACAC 60.203 61.111 10.17 0.00 37.64 3.67
791 792 4.794439 TCGATGCAGGCCGACACG 62.794 66.667 2.59 9.15 0.00 4.49
816 817 3.583383 GCAACAGGCAAGATCGCT 58.417 55.556 0.00 0.00 43.97 4.93
817 818 1.136147 GCAACAGGCAAGATCGCTG 59.864 57.895 0.00 0.00 43.97 5.18
818 819 1.580845 GCAACAGGCAAGATCGCTGT 61.581 55.000 0.00 0.00 43.97 4.40
819 820 1.725641 CAACAGGCAAGATCGCTGTA 58.274 50.000 0.00 0.00 0.00 2.74
820 821 2.283298 CAACAGGCAAGATCGCTGTAT 58.717 47.619 0.00 0.00 0.00 2.29
821 822 2.679837 CAACAGGCAAGATCGCTGTATT 59.320 45.455 0.00 0.00 0.00 1.89
822 823 2.283298 ACAGGCAAGATCGCTGTATTG 58.717 47.619 0.00 0.00 0.00 1.90
823 824 2.283298 CAGGCAAGATCGCTGTATTGT 58.717 47.619 0.00 0.00 0.00 2.71
824 825 3.118775 ACAGGCAAGATCGCTGTATTGTA 60.119 43.478 0.00 0.00 0.00 2.41
825 826 3.246226 CAGGCAAGATCGCTGTATTGTAC 59.754 47.826 0.00 0.00 0.00 2.90
826 827 3.118775 AGGCAAGATCGCTGTATTGTACA 60.119 43.478 0.00 0.00 37.13 2.90
834 835 3.844911 TGTATTGTACAGCCACCGG 57.155 52.632 0.00 0.00 34.06 5.28
835 836 0.250793 TGTATTGTACAGCCACCGGG 59.749 55.000 6.32 0.00 34.06 5.73
836 837 0.538118 GTATTGTACAGCCACCGGGA 59.462 55.000 6.32 0.00 35.59 5.14
837 838 0.538118 TATTGTACAGCCACCGGGAC 59.462 55.000 6.32 0.00 35.59 4.46
838 839 1.198759 ATTGTACAGCCACCGGGACT 61.199 55.000 6.32 0.00 35.59 3.85
839 840 1.823169 TTGTACAGCCACCGGGACTC 61.823 60.000 6.32 0.00 35.59 3.36
840 841 3.066190 TACAGCCACCGGGACTCG 61.066 66.667 6.32 0.00 35.59 4.18
861 862 2.760374 CGGAGCAAGAGAGAAACAAGT 58.240 47.619 0.00 0.00 0.00 3.16
862 863 2.734079 CGGAGCAAGAGAGAAACAAGTC 59.266 50.000 0.00 0.00 0.00 3.01
863 864 3.553922 CGGAGCAAGAGAGAAACAAGTCT 60.554 47.826 0.00 0.00 0.00 3.24
864 865 3.745458 GGAGCAAGAGAGAAACAAGTCTG 59.255 47.826 0.00 0.00 0.00 3.51
865 866 3.737850 AGCAAGAGAGAAACAAGTCTGG 58.262 45.455 0.00 0.00 0.00 3.86
866 867 2.225255 GCAAGAGAGAAACAAGTCTGGC 59.775 50.000 0.00 0.00 0.00 4.85
867 868 2.810852 CAAGAGAGAAACAAGTCTGGCC 59.189 50.000 0.00 0.00 0.00 5.36
868 869 2.050144 AGAGAGAAACAAGTCTGGCCA 58.950 47.619 4.71 4.71 0.00 5.36
869 870 2.147150 GAGAGAAACAAGTCTGGCCAC 58.853 52.381 0.00 0.00 0.00 5.01
870 871 0.868406 GAGAAACAAGTCTGGCCACG 59.132 55.000 0.00 0.00 0.00 4.94
871 872 0.468226 AGAAACAAGTCTGGCCACGA 59.532 50.000 0.00 0.02 0.00 4.35
872 873 0.586802 GAAACAAGTCTGGCCACGAC 59.413 55.000 21.10 21.10 0.00 4.34
873 874 0.107410 AAACAAGTCTGGCCACGACA 60.107 50.000 26.77 2.17 33.89 4.35
874 875 0.814010 AACAAGTCTGGCCACGACAC 60.814 55.000 26.77 12.70 33.89 3.67
875 876 1.227527 CAAGTCTGGCCACGACACA 60.228 57.895 26.77 0.00 33.89 3.72
876 877 1.227556 AAGTCTGGCCACGACACAC 60.228 57.895 26.77 9.21 33.89 3.82
877 878 2.660258 AAGTCTGGCCACGACACACC 62.660 60.000 26.77 8.92 33.89 4.16
878 879 4.293648 TCTGGCCACGACACACCG 62.294 66.667 0.00 0.00 0.00 4.94
890 891 3.130869 ACGACACACCGGTATATAAAGCA 59.869 43.478 6.87 0.00 0.00 3.91
894 895 5.224888 ACACACCGGTATATAAAGCATACG 58.775 41.667 6.87 0.00 30.94 3.06
900 901 4.381185 CGGTATATAAAGCATACGCCCAGA 60.381 45.833 0.00 0.00 39.83 3.86
938 939 4.263572 CGGTGCACCCCAAGTCCA 62.264 66.667 29.95 0.00 0.00 4.02
939 940 2.597510 GGTGCACCCCAAGTCCAC 60.598 66.667 26.31 0.00 0.00 4.02
940 941 2.194597 GTGCACCCCAAGTCCACA 59.805 61.111 5.22 0.00 0.00 4.17
941 942 1.454847 GTGCACCCCAAGTCCACAA 60.455 57.895 5.22 0.00 0.00 3.33
942 943 1.040339 GTGCACCCCAAGTCCACAAA 61.040 55.000 5.22 0.00 0.00 2.83
943 944 1.040339 TGCACCCCAAGTCCACAAAC 61.040 55.000 0.00 0.00 0.00 2.93
944 945 1.744320 GCACCCCAAGTCCACAAACC 61.744 60.000 0.00 0.00 0.00 3.27
945 946 0.106217 CACCCCAAGTCCACAAACCT 60.106 55.000 0.00 0.00 0.00 3.50
946 947 0.185175 ACCCCAAGTCCACAAACCTC 59.815 55.000 0.00 0.00 0.00 3.85
947 948 0.539669 CCCCAAGTCCACAAACCTCC 60.540 60.000 0.00 0.00 0.00 4.30
948 949 0.184933 CCCAAGTCCACAAACCTCCA 59.815 55.000 0.00 0.00 0.00 3.86
949 950 1.318576 CCAAGTCCACAAACCTCCAC 58.681 55.000 0.00 0.00 0.00 4.02
950 951 1.318576 CAAGTCCACAAACCTCCACC 58.681 55.000 0.00 0.00 0.00 4.61
951 952 0.185175 AAGTCCACAAACCTCCACCC 59.815 55.000 0.00 0.00 0.00 4.61
952 953 1.228459 GTCCACAAACCTCCACCCC 60.228 63.158 0.00 0.00 0.00 4.95
953 954 2.282180 CCACAAACCTCCACCCCG 60.282 66.667 0.00 0.00 0.00 5.73
954 955 2.983592 CACAAACCTCCACCCCGC 60.984 66.667 0.00 0.00 0.00 6.13
955 956 4.636435 ACAAACCTCCACCCCGCG 62.636 66.667 0.00 0.00 0.00 6.46
974 975 1.578926 CATCCTCTCGCCTAGCTCG 59.421 63.158 0.00 0.00 0.00 5.03
975 976 2.265182 ATCCTCTCGCCTAGCTCGC 61.265 63.158 0.00 0.00 0.00 5.03
1016 1058 1.069358 CTAGATGGGGAAGCGGAAGTC 59.931 57.143 0.00 0.00 0.00 3.01
1096 1138 2.520458 CCTTCTGCAACCACCCCA 59.480 61.111 0.00 0.00 0.00 4.96
1129 1171 1.674221 GCAAGATCGACCTCAAGCACT 60.674 52.381 0.00 0.00 0.00 4.40
1134 1176 0.033504 TCGACCTCAAGCACTTGGTC 59.966 55.000 10.35 9.58 40.78 4.02
1182 1224 3.701604 GAGCTACTCCACCACGGCG 62.702 68.421 4.80 4.80 33.14 6.46
1234 1276 3.314339 GAGTGGATCGACGAGTGTG 57.686 57.895 3.01 0.00 0.00 3.82
1296 1338 2.901042 GTCCGGGATGAGGTGGAC 59.099 66.667 0.00 0.00 43.60 4.02
1302 1344 1.433879 GGATGAGGTGGACGACGAG 59.566 63.158 0.00 0.00 0.00 4.18
1321 1363 0.039074 GGAGGAGTACGCATGATCGG 60.039 60.000 0.00 0.00 0.00 4.18
1323 1365 1.878088 GAGGAGTACGCATGATCGGTA 59.122 52.381 0.00 0.00 0.00 4.02
1324 1366 1.607628 AGGAGTACGCATGATCGGTAC 59.392 52.381 0.00 2.90 0.00 3.34
1325 1367 1.335810 GGAGTACGCATGATCGGTACA 59.664 52.381 14.53 0.00 0.00 2.90
1326 1368 2.382519 GAGTACGCATGATCGGTACAC 58.617 52.381 14.53 7.80 0.00 2.90
1327 1369 1.066605 AGTACGCATGATCGGTACACC 59.933 52.381 14.53 0.00 0.00 4.16
1362 1404 8.950210 GTGTCCAAGTACACAAGTATAGTACTA 58.050 37.037 4.77 4.77 45.49 1.82
1363 1405 8.950210 TGTCCAAGTACACAAGTATAGTACTAC 58.050 37.037 4.31 0.00 45.49 2.73
1366 1408 8.668353 CCAAGTACACAAGTATAGTACTACGAA 58.332 37.037 4.31 0.00 45.49 3.85
1422 1479 5.403897 CGTAGCGTTGTGATTGGATATTT 57.596 39.130 0.00 0.00 0.00 1.40
1424 1481 4.637483 AGCGTTGTGATTGGATATTTGG 57.363 40.909 0.00 0.00 0.00 3.28
1425 1482 4.269183 AGCGTTGTGATTGGATATTTGGA 58.731 39.130 0.00 0.00 0.00 3.53
1426 1483 4.889409 AGCGTTGTGATTGGATATTTGGAT 59.111 37.500 0.00 0.00 0.00 3.41
1427 1484 4.977963 GCGTTGTGATTGGATATTTGGATG 59.022 41.667 0.00 0.00 0.00 3.51
1428 1485 4.977963 CGTTGTGATTGGATATTTGGATGC 59.022 41.667 0.00 0.00 0.00 3.91
1429 1486 5.291971 GTTGTGATTGGATATTTGGATGCC 58.708 41.667 0.00 0.00 0.00 4.40
1451 1508 5.565045 GCCTCGATTCTTCCGTGTAGATATT 60.565 44.000 0.00 0.00 0.00 1.28
1452 1509 6.349115 GCCTCGATTCTTCCGTGTAGATATTA 60.349 42.308 0.00 0.00 0.00 0.98
1453 1510 7.022384 CCTCGATTCTTCCGTGTAGATATTAC 58.978 42.308 0.00 0.00 0.00 1.89
1454 1511 7.094720 CCTCGATTCTTCCGTGTAGATATTACT 60.095 40.741 0.00 0.00 0.00 2.24
1455 1512 8.837788 TCGATTCTTCCGTGTAGATATTACTA 57.162 34.615 0.00 0.00 0.00 1.82
1456 1513 8.933807 TCGATTCTTCCGTGTAGATATTACTAG 58.066 37.037 0.00 0.00 0.00 2.57
1457 1514 7.693120 CGATTCTTCCGTGTAGATATTACTAGC 59.307 40.741 0.00 0.00 0.00 3.42
1458 1515 7.812690 TTCTTCCGTGTAGATATTACTAGCA 57.187 36.000 0.00 0.00 0.00 3.49
1459 1516 7.997773 TCTTCCGTGTAGATATTACTAGCAT 57.002 36.000 0.00 0.00 0.00 3.79
1460 1517 9.511272 TTCTTCCGTGTAGATATTACTAGCATA 57.489 33.333 0.00 0.00 0.00 3.14
1461 1518 9.682465 TCTTCCGTGTAGATATTACTAGCATAT 57.318 33.333 0.00 0.00 0.00 1.78
1472 1529 9.186323 GATATTACTAGCATATATGAAGGTGCG 57.814 37.037 17.10 0.00 42.18 5.34
1473 1530 4.873746 ACTAGCATATATGAAGGTGCGT 57.126 40.909 17.10 0.57 42.18 5.24
1474 1531 4.560128 ACTAGCATATATGAAGGTGCGTG 58.440 43.478 17.10 2.85 42.18 5.34
1475 1532 2.771089 AGCATATATGAAGGTGCGTGG 58.229 47.619 17.10 0.00 42.18 4.94
1476 1533 2.368548 AGCATATATGAAGGTGCGTGGA 59.631 45.455 17.10 0.00 42.18 4.02
1477 1534 2.480419 GCATATATGAAGGTGCGTGGAC 59.520 50.000 17.10 0.00 0.00 4.02
1478 1535 3.803715 GCATATATGAAGGTGCGTGGACT 60.804 47.826 17.10 0.00 0.00 3.85
1479 1536 2.315925 ATATGAAGGTGCGTGGACTG 57.684 50.000 0.00 0.00 0.00 3.51
1480 1537 1.262417 TATGAAGGTGCGTGGACTGA 58.738 50.000 0.00 0.00 0.00 3.41
1481 1538 0.396435 ATGAAGGTGCGTGGACTGAA 59.604 50.000 0.00 0.00 0.00 3.02
1482 1539 0.531974 TGAAGGTGCGTGGACTGAAC 60.532 55.000 0.00 0.00 0.00 3.18
1483 1540 0.249911 GAAGGTGCGTGGACTGAACT 60.250 55.000 0.00 0.00 0.00 3.01
1484 1541 1.000506 GAAGGTGCGTGGACTGAACTA 59.999 52.381 0.00 0.00 0.00 2.24
1485 1542 0.603569 AGGTGCGTGGACTGAACTAG 59.396 55.000 0.00 0.00 0.00 2.57
1486 1543 0.317479 GGTGCGTGGACTGAACTAGT 59.683 55.000 0.00 0.00 44.02 2.57
1487 1544 1.542915 GGTGCGTGGACTGAACTAGTA 59.457 52.381 0.00 0.00 40.53 1.82
1488 1545 2.029649 GGTGCGTGGACTGAACTAGTAA 60.030 50.000 0.00 0.00 40.53 2.24
1489 1546 3.368116 GGTGCGTGGACTGAACTAGTAAT 60.368 47.826 0.00 0.00 40.53 1.89
1490 1547 4.243270 GTGCGTGGACTGAACTAGTAATT 58.757 43.478 0.00 0.00 40.53 1.40
1491 1548 4.091509 GTGCGTGGACTGAACTAGTAATTG 59.908 45.833 0.00 0.00 40.53 2.32
1492 1549 4.021807 TGCGTGGACTGAACTAGTAATTGA 60.022 41.667 0.00 0.00 40.53 2.57
1493 1550 4.927425 GCGTGGACTGAACTAGTAATTGAA 59.073 41.667 0.00 0.00 40.53 2.69
1494 1551 5.062308 GCGTGGACTGAACTAGTAATTGAAG 59.938 44.000 0.00 0.00 40.53 3.02
1495 1552 5.062308 CGTGGACTGAACTAGTAATTGAAGC 59.938 44.000 0.00 0.00 40.53 3.86
1496 1553 5.062308 GTGGACTGAACTAGTAATTGAAGCG 59.938 44.000 0.00 0.00 40.53 4.68
1497 1554 4.033014 GGACTGAACTAGTAATTGAAGCGC 59.967 45.833 0.00 0.00 40.53 5.92
1498 1555 3.933332 ACTGAACTAGTAATTGAAGCGCC 59.067 43.478 2.29 0.00 38.04 6.53
1499 1556 3.932710 CTGAACTAGTAATTGAAGCGCCA 59.067 43.478 2.29 0.00 0.00 5.69
1500 1557 4.320023 TGAACTAGTAATTGAAGCGCCAA 58.680 39.130 2.29 1.82 0.00 4.52
1501 1558 4.757657 TGAACTAGTAATTGAAGCGCCAAA 59.242 37.500 2.29 0.00 0.00 3.28
1502 1559 5.414454 TGAACTAGTAATTGAAGCGCCAAAT 59.586 36.000 2.29 0.00 0.00 2.32
1503 1560 6.596106 TGAACTAGTAATTGAAGCGCCAAATA 59.404 34.615 2.29 0.00 0.00 1.40
1504 1561 6.359480 ACTAGTAATTGAAGCGCCAAATAC 57.641 37.500 2.29 10.00 34.35 1.89
1505 1562 4.632538 AGTAATTGAAGCGCCAAATACC 57.367 40.909 16.26 5.16 34.56 2.73
1506 1563 4.270008 AGTAATTGAAGCGCCAAATACCT 58.730 39.130 16.26 6.81 34.56 3.08
1507 1564 3.508744 AATTGAAGCGCCAAATACCTG 57.491 42.857 2.29 0.00 0.00 4.00
1508 1565 2.192664 TTGAAGCGCCAAATACCTGA 57.807 45.000 2.29 0.00 0.00 3.86
1509 1566 2.192664 TGAAGCGCCAAATACCTGAA 57.807 45.000 2.29 0.00 0.00 3.02
1510 1567 2.722094 TGAAGCGCCAAATACCTGAAT 58.278 42.857 2.29 0.00 0.00 2.57
1511 1568 2.423185 TGAAGCGCCAAATACCTGAATG 59.577 45.455 2.29 0.00 0.00 2.67
1512 1569 1.392589 AGCGCCAAATACCTGAATGG 58.607 50.000 2.29 0.00 42.93 3.16
1513 1570 1.064758 AGCGCCAAATACCTGAATGGA 60.065 47.619 2.29 0.00 39.71 3.41
1514 1571 1.334869 GCGCCAAATACCTGAATGGAG 59.665 52.381 0.00 0.00 39.71 3.86
1515 1572 2.643551 CGCCAAATACCTGAATGGAGT 58.356 47.619 0.00 0.00 39.71 3.85
1516 1573 3.804036 CGCCAAATACCTGAATGGAGTA 58.196 45.455 0.00 0.00 39.71 2.59
1517 1574 4.196193 CGCCAAATACCTGAATGGAGTAA 58.804 43.478 0.00 0.00 39.71 2.24
1518 1575 4.273480 CGCCAAATACCTGAATGGAGTAAG 59.727 45.833 0.00 0.00 39.71 2.34
1519 1576 5.437060 GCCAAATACCTGAATGGAGTAAGA 58.563 41.667 0.00 0.00 39.71 2.10
1520 1577 5.885912 GCCAAATACCTGAATGGAGTAAGAA 59.114 40.000 0.00 0.00 39.71 2.52
1521 1578 6.547510 GCCAAATACCTGAATGGAGTAAGAAT 59.452 38.462 0.00 0.00 39.71 2.40
1522 1579 7.255277 GCCAAATACCTGAATGGAGTAAGAATC 60.255 40.741 0.00 0.00 39.71 2.52
1523 1580 7.775093 CCAAATACCTGAATGGAGTAAGAATCA 59.225 37.037 0.00 0.00 39.71 2.57
1524 1581 8.834465 CAAATACCTGAATGGAGTAAGAATCAG 58.166 37.037 0.00 0.00 39.71 2.90
1525 1582 7.682787 ATACCTGAATGGAGTAAGAATCAGT 57.317 36.000 0.00 0.00 39.71 3.41
1526 1583 8.783660 ATACCTGAATGGAGTAAGAATCAGTA 57.216 34.615 0.00 0.00 39.71 2.74
1527 1584 7.682787 ACCTGAATGGAGTAAGAATCAGTAT 57.317 36.000 0.00 0.00 39.71 2.12
1528 1585 8.783660 ACCTGAATGGAGTAAGAATCAGTATA 57.216 34.615 0.00 0.00 39.71 1.47
1529 1586 8.643324 ACCTGAATGGAGTAAGAATCAGTATAC 58.357 37.037 0.00 0.00 39.71 1.47
1530 1587 8.642432 CCTGAATGGAGTAAGAATCAGTATACA 58.358 37.037 5.50 0.00 38.35 2.29
1531 1588 9.469807 CTGAATGGAGTAAGAATCAGTATACAC 57.530 37.037 5.50 0.00 31.85 2.90
1532 1589 8.135529 TGAATGGAGTAAGAATCAGTATACACG 58.864 37.037 5.50 0.00 0.00 4.49
1533 1590 7.584122 ATGGAGTAAGAATCAGTATACACGT 57.416 36.000 5.50 0.00 0.00 4.49
1534 1591 8.687292 ATGGAGTAAGAATCAGTATACACGTA 57.313 34.615 5.50 0.00 0.00 3.57
1535 1592 7.923888 TGGAGTAAGAATCAGTATACACGTAC 58.076 38.462 5.50 4.44 0.00 3.67
1536 1593 7.772292 TGGAGTAAGAATCAGTATACACGTACT 59.228 37.037 5.50 8.43 35.34 2.73
1630 1696 6.640518 AGAGAGAGAGTTTGTTACAACACAA 58.359 36.000 0.00 0.00 38.92 3.33
1691 1757 1.354705 GACCCTAGTTTCTTTGCCCCT 59.645 52.381 0.00 0.00 0.00 4.79
1696 1762 1.043022 AGTTTCTTTGCCCCTGCTTG 58.957 50.000 0.00 0.00 38.71 4.01
1932 1998 2.927429 TGTCGTGGATGCGAAATTTTG 58.073 42.857 0.59 0.59 42.82 2.44
1991 2057 2.012673 CTGAAGAAAAGATGAGGGCCG 58.987 52.381 0.00 0.00 0.00 6.13
2003 2069 4.424711 GGGCCGCATTCCTCCACA 62.425 66.667 0.00 0.00 0.00 4.17
2042 2108 1.819632 GCCACAGTTAGGCCATCCG 60.820 63.158 5.01 0.00 46.50 4.18
2208 2274 3.849951 CCGCGGAGTAGTGCCCAT 61.850 66.667 24.07 0.00 0.00 4.00
2301 2367 1.273327 GGGTGAAGAATTGGGCAACAG 59.727 52.381 0.00 0.00 39.74 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.168302 CGTGAATTTGTTTAGTTGCCAAATGTA 59.832 33.333 0.00 0.00 38.44 2.29
1 2 6.019156 CGTGAATTTGTTTAGTTGCCAAATGT 60.019 34.615 0.00 0.00 38.44 2.71
2 3 6.354080 CGTGAATTTGTTTAGTTGCCAAATG 58.646 36.000 0.00 0.00 38.44 2.32
3 4 5.050431 GCGTGAATTTGTTTAGTTGCCAAAT 60.050 36.000 0.00 0.00 39.72 2.32
5 6 3.799420 GCGTGAATTTGTTTAGTTGCCAA 59.201 39.130 0.00 0.00 0.00 4.52
6 7 3.376540 GCGTGAATTTGTTTAGTTGCCA 58.623 40.909 0.00 0.00 0.00 4.92
7 8 2.403698 CGCGTGAATTTGTTTAGTTGCC 59.596 45.455 0.00 0.00 0.00 4.52
8 9 3.040099 ACGCGTGAATTTGTTTAGTTGC 58.960 40.909 12.93 0.00 0.00 4.17
9 10 5.228220 TCAAACGCGTGAATTTGTTTAGTTG 59.772 36.000 14.98 8.92 37.16 3.16
10 11 5.333513 TCAAACGCGTGAATTTGTTTAGTT 58.666 33.333 14.98 0.00 37.16 2.24
11 12 4.911053 TCAAACGCGTGAATTTGTTTAGT 58.089 34.783 14.98 0.00 37.16 2.24
12 13 5.858159 TTCAAACGCGTGAATTTGTTTAG 57.142 34.783 14.98 0.00 37.16 1.85
13 14 6.627690 TTTTCAAACGCGTGAATTTGTTTA 57.372 29.167 14.98 1.30 37.36 2.01
14 15 5.517037 TTTTCAAACGCGTGAATTTGTTT 57.483 30.435 14.98 0.00 37.36 2.83
15 16 5.517037 TTTTTCAAACGCGTGAATTTGTT 57.483 30.435 14.98 0.00 37.36 2.83
16 17 5.710613 ATTTTTCAAACGCGTGAATTTGT 57.289 30.435 14.98 0.00 37.36 2.83
17 18 9.395405 CATATATTTTTCAAACGCGTGAATTTG 57.605 29.630 14.98 14.24 37.36 2.32
18 19 9.134734 ACATATATTTTTCAAACGCGTGAATTT 57.865 25.926 14.98 0.00 37.36 1.82
19 20 8.582930 CACATATATTTTTCAAACGCGTGAATT 58.417 29.630 14.98 0.00 37.36 2.17
20 21 7.965655 TCACATATATTTTTCAAACGCGTGAAT 59.034 29.630 14.98 9.22 37.36 2.57
21 22 7.269511 GTCACATATATTTTTCAAACGCGTGAA 59.730 33.333 14.98 10.74 35.72 3.18
22 23 6.739100 GTCACATATATTTTTCAAACGCGTGA 59.261 34.615 14.98 3.21 0.00 4.35
23 24 6.521477 TGTCACATATATTTTTCAAACGCGTG 59.479 34.615 14.98 0.00 0.00 5.34
24 25 6.604012 TGTCACATATATTTTTCAAACGCGT 58.396 32.000 5.58 5.58 0.00 6.01
25 26 7.663630 ATGTCACATATATTTTTCAAACGCG 57.336 32.000 3.53 3.53 0.00 6.01
40 41 9.126151 TGTAACCTTTTGAGAAAATGTCACATA 57.874 29.630 0.00 0.00 26.94 2.29
41 42 7.920682 GTGTAACCTTTTGAGAAAATGTCACAT 59.079 33.333 0.00 0.00 32.34 3.21
42 43 7.094162 TGTGTAACCTTTTGAGAAAATGTCACA 60.094 33.333 0.00 0.00 34.54 3.58
43 44 7.254852 TGTGTAACCTTTTGAGAAAATGTCAC 58.745 34.615 0.00 0.00 34.36 3.67
44 45 7.122055 ACTGTGTAACCTTTTGAGAAAATGTCA 59.878 33.333 0.00 0.00 34.36 3.58
45 46 7.432252 CACTGTGTAACCTTTTGAGAAAATGTC 59.568 37.037 0.00 0.00 34.36 3.06
46 47 7.093945 ACACTGTGTAACCTTTTGAGAAAATGT 60.094 33.333 12.53 0.00 34.36 2.71
47 48 7.257722 ACACTGTGTAACCTTTTGAGAAAATG 58.742 34.615 12.53 0.00 34.36 2.32
48 49 7.404671 ACACTGTGTAACCTTTTGAGAAAAT 57.595 32.000 12.53 0.00 34.36 1.82
49 50 6.827586 ACACTGTGTAACCTTTTGAGAAAA 57.172 33.333 12.53 0.00 34.36 2.29
50 51 7.925043 TTACACTGTGTAACCTTTTGAGAAA 57.075 32.000 25.14 4.81 37.86 2.52
51 52 7.925043 TTTACACTGTGTAACCTTTTGAGAA 57.075 32.000 27.82 10.64 41.97 2.87
52 53 9.616156 TTATTTACACTGTGTAACCTTTTGAGA 57.384 29.630 27.82 13.75 41.97 3.27
59 60 9.880157 ACGAATATTATTTACACTGTGTAACCT 57.120 29.630 27.82 20.84 41.97 3.50
78 79 9.620660 GGAATGTGTTTTCAGTTAAACGAATAT 57.379 29.630 0.00 0.00 40.14 1.28
79 80 8.842280 AGGAATGTGTTTTCAGTTAAACGAATA 58.158 29.630 0.00 0.00 40.14 1.75
80 81 7.712797 AGGAATGTGTTTTCAGTTAAACGAAT 58.287 30.769 0.00 0.00 40.14 3.34
81 82 7.090953 AGGAATGTGTTTTCAGTTAAACGAA 57.909 32.000 0.00 0.00 40.14 3.85
82 83 6.687081 AGGAATGTGTTTTCAGTTAAACGA 57.313 33.333 0.00 0.00 40.14 3.85
83 84 7.377662 GGTAAGGAATGTGTTTTCAGTTAAACG 59.622 37.037 0.00 0.00 40.14 3.60
84 85 8.192110 TGGTAAGGAATGTGTTTTCAGTTAAAC 58.808 33.333 0.00 0.00 38.26 2.01
85 86 8.294954 TGGTAAGGAATGTGTTTTCAGTTAAA 57.705 30.769 0.00 0.00 0.00 1.52
86 87 7.883391 TGGTAAGGAATGTGTTTTCAGTTAA 57.117 32.000 0.00 0.00 0.00 2.01
87 88 8.356657 CAATGGTAAGGAATGTGTTTTCAGTTA 58.643 33.333 0.00 0.00 0.00 2.24
88 89 6.976934 ATGGTAAGGAATGTGTTTTCAGTT 57.023 33.333 0.00 0.00 0.00 3.16
89 90 6.549364 TCAATGGTAAGGAATGTGTTTTCAGT 59.451 34.615 0.00 0.00 0.00 3.41
90 91 6.980593 TCAATGGTAAGGAATGTGTTTTCAG 58.019 36.000 0.00 0.00 0.00 3.02
91 92 6.968263 TCAATGGTAAGGAATGTGTTTTCA 57.032 33.333 0.00 0.00 0.00 2.69
92 93 8.655651 TTTTCAATGGTAAGGAATGTGTTTTC 57.344 30.769 0.00 0.00 0.00 2.29
93 94 9.054922 CATTTTCAATGGTAAGGAATGTGTTTT 57.945 29.630 0.00 0.00 0.00 2.43
94 95 8.210265 ACATTTTCAATGGTAAGGAATGTGTTT 58.790 29.630 1.72 0.00 35.59 2.83
95 96 7.734942 ACATTTTCAATGGTAAGGAATGTGTT 58.265 30.769 1.72 0.00 35.59 3.32
96 97 7.301868 ACATTTTCAATGGTAAGGAATGTGT 57.698 32.000 1.72 0.00 35.59 3.72
97 98 9.874205 AATACATTTTCAATGGTAAGGAATGTG 57.126 29.630 8.57 0.00 37.00 3.21
149 150 9.208022 TGTTGTTGTCACAAACATATTTTTGAA 57.792 25.926 18.78 5.90 44.72 2.69
150 151 8.651588 GTGTTGTTGTCACAAACATATTTTTGA 58.348 29.630 18.78 0.00 44.72 2.69
151 152 8.438513 TGTGTTGTTGTCACAAACATATTTTTG 58.561 29.630 11.86 11.86 44.72 2.44
152 153 8.539770 TGTGTTGTTGTCACAAACATATTTTT 57.460 26.923 0.00 0.00 44.72 1.94
153 154 8.715191 ATGTGTTGTTGTCACAAACATATTTT 57.285 26.923 4.10 0.00 44.72 1.82
154 155 7.978414 TGATGTGTTGTTGTCACAAACATATTT 59.022 29.630 5.70 0.00 44.72 1.40
155 156 7.487484 TGATGTGTTGTTGTCACAAACATATT 58.513 30.769 5.70 0.00 44.72 1.28
156 157 7.036996 TGATGTGTTGTTGTCACAAACATAT 57.963 32.000 5.70 5.19 44.72 1.78
157 158 6.442513 TGATGTGTTGTTGTCACAAACATA 57.557 33.333 5.70 0.63 44.72 2.29
158 159 5.321959 TGATGTGTTGTTGTCACAAACAT 57.678 34.783 5.43 5.43 44.72 2.71
159 160 4.773323 TGATGTGTTGTTGTCACAAACA 57.227 36.364 0.00 0.00 44.72 2.83
160 161 4.920340 TGTTGATGTGTTGTTGTCACAAAC 59.080 37.500 0.00 5.15 44.72 2.93
161 162 4.920340 GTGTTGATGTGTTGTTGTCACAAA 59.080 37.500 0.00 0.00 44.72 2.83
162 163 4.022849 TGTGTTGATGTGTTGTTGTCACAA 60.023 37.500 2.99 0.00 46.47 3.33
164 165 4.090138 TGTGTTGATGTGTTGTTGTCAC 57.910 40.909 0.00 0.00 36.48 3.67
165 166 4.979943 ATGTGTTGATGTGTTGTTGTCA 57.020 36.364 0.00 0.00 0.00 3.58
166 167 7.434897 ACAAATATGTGTTGATGTGTTGTTGTC 59.565 33.333 0.00 0.00 38.69 3.18
167 168 7.264221 ACAAATATGTGTTGATGTGTTGTTGT 58.736 30.769 0.00 0.00 38.69 3.32
168 169 7.697352 ACAAATATGTGTTGATGTGTTGTTG 57.303 32.000 0.00 0.00 38.69 3.33
232 233 9.524106 CACGAACCATTAGTATAAACTATGTGA 57.476 33.333 0.00 0.00 38.02 3.58
233 234 9.309516 ACACGAACCATTAGTATAAACTATGTG 57.690 33.333 0.00 0.00 38.02 3.21
234 235 9.525409 GACACGAACCATTAGTATAAACTATGT 57.475 33.333 0.00 0.00 38.02 2.29
235 236 9.745880 AGACACGAACCATTAGTATAAACTATG 57.254 33.333 0.00 0.00 38.02 2.23
238 239 9.498176 AAAAGACACGAACCATTAGTATAAACT 57.502 29.630 0.00 0.00 39.91 2.66
239 240 9.537848 CAAAAGACACGAACCATTAGTATAAAC 57.462 33.333 0.00 0.00 0.00 2.01
240 241 9.491675 TCAAAAGACACGAACCATTAGTATAAA 57.508 29.630 0.00 0.00 0.00 1.40
241 242 9.491675 TTCAAAAGACACGAACCATTAGTATAA 57.508 29.630 0.00 0.00 0.00 0.98
242 243 9.491675 TTTCAAAAGACACGAACCATTAGTATA 57.508 29.630 0.00 0.00 0.00 1.47
243 244 7.972832 TTCAAAAGACACGAACCATTAGTAT 57.027 32.000 0.00 0.00 0.00 2.12
244 245 7.789273 TTTCAAAAGACACGAACCATTAGTA 57.211 32.000 0.00 0.00 0.00 1.82
245 246 6.687081 TTTCAAAAGACACGAACCATTAGT 57.313 33.333 0.00 0.00 0.00 2.24
246 247 7.979115 TTTTTCAAAAGACACGAACCATTAG 57.021 32.000 0.00 0.00 0.00 1.73
500 501 9.425577 TCAACACGTGTCTAATTTTCATACATA 57.574 29.630 23.61 0.00 0.00 2.29
501 502 8.317891 TCAACACGTGTCTAATTTTCATACAT 57.682 30.769 23.61 0.00 0.00 2.29
502 503 7.716768 TCAACACGTGTCTAATTTTCATACA 57.283 32.000 23.61 0.00 0.00 2.29
503 504 8.996988 TTTCAACACGTGTCTAATTTTCATAC 57.003 30.769 23.61 0.00 0.00 2.39
556 557 5.514274 TTTGCATCGGTTTCTCTCTTTTT 57.486 34.783 0.00 0.00 0.00 1.94
557 558 5.514274 TTTTGCATCGGTTTCTCTCTTTT 57.486 34.783 0.00 0.00 0.00 2.27
558 559 5.514274 TTTTTGCATCGGTTTCTCTCTTT 57.486 34.783 0.00 0.00 0.00 2.52
577 578 4.399934 TCTCCCTGTTTTGTAACGCTTTTT 59.600 37.500 0.00 0.00 37.06 1.94
578 579 3.949113 TCTCCCTGTTTTGTAACGCTTTT 59.051 39.130 0.00 0.00 37.06 2.27
579 580 3.547746 TCTCCCTGTTTTGTAACGCTTT 58.452 40.909 0.00 0.00 37.06 3.51
580 581 3.139077 CTCTCCCTGTTTTGTAACGCTT 58.861 45.455 0.00 0.00 37.06 4.68
581 582 2.367567 TCTCTCCCTGTTTTGTAACGCT 59.632 45.455 0.00 0.00 37.06 5.07
582 583 2.762745 TCTCTCCCTGTTTTGTAACGC 58.237 47.619 0.00 0.00 37.06 4.84
583 584 4.814771 AGTTTCTCTCCCTGTTTTGTAACG 59.185 41.667 0.00 0.00 37.06 3.18
584 585 6.238676 GGAAGTTTCTCTCCCTGTTTTGTAAC 60.239 42.308 0.00 0.00 34.75 2.50
585 586 5.826208 GGAAGTTTCTCTCCCTGTTTTGTAA 59.174 40.000 0.00 0.00 0.00 2.41
586 587 5.374071 GGAAGTTTCTCTCCCTGTTTTGTA 58.626 41.667 0.00 0.00 0.00 2.41
587 588 4.207955 GGAAGTTTCTCTCCCTGTTTTGT 58.792 43.478 0.00 0.00 0.00 2.83
588 589 3.251004 CGGAAGTTTCTCTCCCTGTTTTG 59.749 47.826 0.00 0.00 0.00 2.44
589 590 3.135895 TCGGAAGTTTCTCTCCCTGTTTT 59.864 43.478 0.00 0.00 0.00 2.43
590 591 2.704065 TCGGAAGTTTCTCTCCCTGTTT 59.296 45.455 0.00 0.00 0.00 2.83
591 592 2.300437 CTCGGAAGTTTCTCTCCCTGTT 59.700 50.000 0.00 0.00 0.00 3.16
592 593 1.896465 CTCGGAAGTTTCTCTCCCTGT 59.104 52.381 0.00 0.00 0.00 4.00
593 594 1.404851 GCTCGGAAGTTTCTCTCCCTG 60.405 57.143 0.00 0.00 0.00 4.45
594 595 0.899019 GCTCGGAAGTTTCTCTCCCT 59.101 55.000 0.00 0.00 0.00 4.20
595 596 0.608640 TGCTCGGAAGTTTCTCTCCC 59.391 55.000 0.00 0.00 0.00 4.30
596 597 2.003196 CTGCTCGGAAGTTTCTCTCC 57.997 55.000 0.00 0.00 0.00 3.71
597 598 1.067213 AGCTGCTCGGAAGTTTCTCTC 60.067 52.381 0.00 0.00 0.00 3.20
598 599 0.972883 AGCTGCTCGGAAGTTTCTCT 59.027 50.000 0.00 0.00 0.00 3.10
599 600 2.656560 TAGCTGCTCGGAAGTTTCTC 57.343 50.000 4.91 0.00 0.00 2.87
600 601 3.702045 ACTATAGCTGCTCGGAAGTTTCT 59.298 43.478 4.91 0.00 0.00 2.52
601 602 4.048241 ACTATAGCTGCTCGGAAGTTTC 57.952 45.455 4.91 0.00 0.00 2.78
602 603 5.793030 ATACTATAGCTGCTCGGAAGTTT 57.207 39.130 4.91 0.00 0.00 2.66
603 604 5.509840 CCAATACTATAGCTGCTCGGAAGTT 60.510 44.000 4.91 0.00 0.00 2.66
604 605 4.021894 CCAATACTATAGCTGCTCGGAAGT 60.022 45.833 4.91 8.27 0.00 3.01
605 606 4.489810 CCAATACTATAGCTGCTCGGAAG 58.510 47.826 4.91 2.14 0.00 3.46
606 607 3.258372 CCCAATACTATAGCTGCTCGGAA 59.742 47.826 4.91 0.00 0.00 4.30
607 608 2.826128 CCCAATACTATAGCTGCTCGGA 59.174 50.000 4.91 0.00 0.00 4.55
608 609 2.675317 GCCCAATACTATAGCTGCTCGG 60.675 54.545 4.91 0.00 0.00 4.63
609 610 2.232452 AGCCCAATACTATAGCTGCTCG 59.768 50.000 4.91 0.00 31.23 5.03
610 611 3.594134 CAGCCCAATACTATAGCTGCTC 58.406 50.000 4.91 0.00 43.84 4.26
611 612 3.692257 CAGCCCAATACTATAGCTGCT 57.308 47.619 7.57 7.57 43.84 4.24
647 648 0.323360 TAATTGGTCCTGCCCACAGC 60.323 55.000 0.00 0.00 43.02 4.40
648 649 1.463674 GTAATTGGTCCTGCCCACAG 58.536 55.000 0.00 0.00 44.05 3.66
649 650 0.322098 CGTAATTGGTCCTGCCCACA 60.322 55.000 0.00 0.00 33.14 4.17
650 651 0.035820 TCGTAATTGGTCCTGCCCAC 60.036 55.000 0.00 0.00 33.14 4.61
651 652 0.035820 GTCGTAATTGGTCCTGCCCA 60.036 55.000 0.00 0.00 36.04 5.36
652 653 0.252197 AGTCGTAATTGGTCCTGCCC 59.748 55.000 0.00 0.00 36.04 5.36
653 654 1.653151 GAGTCGTAATTGGTCCTGCC 58.347 55.000 0.00 0.00 37.90 4.85
654 655 1.278238 CGAGTCGTAATTGGTCCTGC 58.722 55.000 3.82 0.00 0.00 4.85
655 656 1.278238 GCGAGTCGTAATTGGTCCTG 58.722 55.000 15.08 0.00 0.00 3.86
656 657 0.892755 TGCGAGTCGTAATTGGTCCT 59.107 50.000 15.08 0.00 0.00 3.85
657 658 1.278238 CTGCGAGTCGTAATTGGTCC 58.722 55.000 15.08 0.00 0.00 4.46
658 659 0.645868 GCTGCGAGTCGTAATTGGTC 59.354 55.000 15.08 0.00 0.00 4.02
659 660 0.037697 TGCTGCGAGTCGTAATTGGT 60.038 50.000 15.08 0.00 0.00 3.67
660 661 0.647410 CTGCTGCGAGTCGTAATTGG 59.353 55.000 15.08 0.00 0.00 3.16
661 662 0.647410 CCTGCTGCGAGTCGTAATTG 59.353 55.000 15.08 0.00 0.00 2.32
662 663 1.084370 GCCTGCTGCGAGTCGTAATT 61.084 55.000 15.08 0.00 0.00 1.40
663 664 1.519455 GCCTGCTGCGAGTCGTAAT 60.519 57.895 15.08 0.00 0.00 1.89
664 665 2.126071 GCCTGCTGCGAGTCGTAA 60.126 61.111 15.08 2.03 0.00 3.18
673 674 1.091771 TGCTATTTCTCGCCTGCTGC 61.092 55.000 0.00 0.00 0.00 5.25
674 675 1.590932 ATGCTATTTCTCGCCTGCTG 58.409 50.000 0.00 0.00 0.00 4.41
675 676 2.338577 AATGCTATTTCTCGCCTGCT 57.661 45.000 0.00 0.00 0.00 4.24
676 677 3.366719 GAAAATGCTATTTCTCGCCTGC 58.633 45.455 7.32 0.00 36.57 4.85
677 678 3.063997 ACGAAAATGCTATTTCTCGCCTG 59.936 43.478 11.31 0.80 37.20 4.85
678 679 3.270877 ACGAAAATGCTATTTCTCGCCT 58.729 40.909 11.31 1.55 37.20 5.52
679 680 3.675467 ACGAAAATGCTATTTCTCGCC 57.325 42.857 11.31 0.00 37.20 5.54
680 681 5.391060 ACTACGAAAATGCTATTTCTCGC 57.609 39.130 11.31 0.00 37.20 5.03
681 682 7.891782 TGTTACTACGAAAATGCTATTTCTCG 58.108 34.615 11.31 13.77 37.20 4.04
682 683 9.690434 CTTGTTACTACGAAAATGCTATTTCTC 57.310 33.333 11.31 4.62 37.20 2.87
683 684 8.665685 CCTTGTTACTACGAAAATGCTATTTCT 58.334 33.333 11.31 3.93 37.20 2.52
684 685 7.428472 GCCTTGTTACTACGAAAATGCTATTTC 59.572 37.037 0.00 5.13 36.24 2.17
685 686 7.248437 GCCTTGTTACTACGAAAATGCTATTT 58.752 34.615 0.00 0.00 0.00 1.40
686 687 6.183360 GGCCTTGTTACTACGAAAATGCTATT 60.183 38.462 0.00 0.00 0.00 1.73
687 688 5.296035 GGCCTTGTTACTACGAAAATGCTAT 59.704 40.000 0.00 0.00 0.00 2.97
688 689 4.632688 GGCCTTGTTACTACGAAAATGCTA 59.367 41.667 0.00 0.00 0.00 3.49
689 690 3.439129 GGCCTTGTTACTACGAAAATGCT 59.561 43.478 0.00 0.00 0.00 3.79
690 691 3.439129 AGGCCTTGTTACTACGAAAATGC 59.561 43.478 0.00 0.00 0.00 3.56
691 692 6.537301 TCATAGGCCTTGTTACTACGAAAATG 59.463 38.462 12.58 2.92 0.00 2.32
692 693 6.646267 TCATAGGCCTTGTTACTACGAAAAT 58.354 36.000 12.58 0.00 0.00 1.82
693 694 6.040209 TCATAGGCCTTGTTACTACGAAAA 57.960 37.500 12.58 0.00 0.00 2.29
694 695 5.664294 TCATAGGCCTTGTTACTACGAAA 57.336 39.130 12.58 0.00 0.00 3.46
695 696 5.864418 ATCATAGGCCTTGTTACTACGAA 57.136 39.130 12.58 0.00 0.00 3.85
696 697 6.071560 CCATATCATAGGCCTTGTTACTACGA 60.072 42.308 12.58 0.00 0.00 3.43
697 698 6.100004 CCATATCATAGGCCTTGTTACTACG 58.900 44.000 12.58 0.00 0.00 3.51
698 699 7.005709 ACCATATCATAGGCCTTGTTACTAC 57.994 40.000 12.58 0.00 0.00 2.73
699 700 7.626999 AACCATATCATAGGCCTTGTTACTA 57.373 36.000 12.58 0.00 0.00 1.82
700 701 6.515512 AACCATATCATAGGCCTTGTTACT 57.484 37.500 12.58 0.00 0.00 2.24
701 702 9.953565 TTATAACCATATCATAGGCCTTGTTAC 57.046 33.333 12.58 0.00 0.00 2.50
703 704 8.890472 TCTTATAACCATATCATAGGCCTTGTT 58.110 33.333 12.58 7.14 0.00 2.83
704 705 8.322091 GTCTTATAACCATATCATAGGCCTTGT 58.678 37.037 12.58 0.00 0.00 3.16
705 706 7.770897 GGTCTTATAACCATATCATAGGCCTTG 59.229 40.741 12.58 9.74 39.27 3.61
706 707 7.684619 AGGTCTTATAACCATATCATAGGCCTT 59.315 37.037 12.58 0.00 42.12 4.35
707 708 7.199765 AGGTCTTATAACCATATCATAGGCCT 58.800 38.462 11.78 11.78 42.12 5.19
708 709 7.439108 AGGTCTTATAACCATATCATAGGCC 57.561 40.000 0.00 0.00 42.12 5.19
709 710 9.167311 CAAAGGTCTTATAACCATATCATAGGC 57.833 37.037 0.00 0.00 42.12 3.93
710 711 9.672673 CCAAAGGTCTTATAACCATATCATAGG 57.327 37.037 0.00 0.00 42.12 2.57
711 712 9.672673 CCCAAAGGTCTTATAACCATATCATAG 57.327 37.037 0.00 0.00 42.12 2.23
712 713 8.107095 GCCCAAAGGTCTTATAACCATATCATA 58.893 37.037 0.00 0.00 42.12 2.15
713 714 6.948309 GCCCAAAGGTCTTATAACCATATCAT 59.052 38.462 0.00 0.00 42.12 2.45
714 715 6.126332 TGCCCAAAGGTCTTATAACCATATCA 60.126 38.462 0.00 0.00 42.12 2.15
715 716 6.303839 TGCCCAAAGGTCTTATAACCATATC 58.696 40.000 0.00 0.00 42.12 1.63
716 717 6.274322 TGCCCAAAGGTCTTATAACCATAT 57.726 37.500 0.00 0.00 42.12 1.78
717 718 5.718801 TGCCCAAAGGTCTTATAACCATA 57.281 39.130 0.00 0.00 42.12 2.74
718 719 4.601406 TGCCCAAAGGTCTTATAACCAT 57.399 40.909 0.00 0.00 42.12 3.55
719 720 4.390129 TTGCCCAAAGGTCTTATAACCA 57.610 40.909 0.00 0.00 42.12 3.67
720 721 5.932619 ATTTGCCCAAAGGTCTTATAACC 57.067 39.130 0.00 0.00 39.80 2.85
721 722 7.093945 TGAGAATTTGCCCAAAGGTCTTATAAC 60.094 37.037 9.67 1.45 32.23 1.89
722 723 6.951198 TGAGAATTTGCCCAAAGGTCTTATAA 59.049 34.615 9.67 0.00 32.23 0.98
723 724 6.489603 TGAGAATTTGCCCAAAGGTCTTATA 58.510 36.000 9.67 1.50 32.23 0.98
724 725 5.332743 TGAGAATTTGCCCAAAGGTCTTAT 58.667 37.500 9.67 0.00 32.23 1.73
725 726 4.735369 TGAGAATTTGCCCAAAGGTCTTA 58.265 39.130 9.67 5.12 32.23 2.10
726 727 3.575687 CTGAGAATTTGCCCAAAGGTCTT 59.424 43.478 9.67 0.00 32.23 3.01
727 728 3.160269 CTGAGAATTTGCCCAAAGGTCT 58.840 45.455 8.60 8.60 33.75 3.85
728 729 3.157087 TCTGAGAATTTGCCCAAAGGTC 58.843 45.455 0.00 0.55 33.32 3.85
729 730 3.243359 TCTGAGAATTTGCCCAAAGGT 57.757 42.857 0.00 0.00 33.32 3.50
730 731 3.612479 CGTTCTGAGAATTTGCCCAAAGG 60.612 47.826 0.00 0.00 33.32 3.11
731 732 3.568538 CGTTCTGAGAATTTGCCCAAAG 58.431 45.455 0.00 0.00 33.32 2.77
732 733 2.295909 CCGTTCTGAGAATTTGCCCAAA 59.704 45.455 0.00 0.00 34.46 3.28
733 734 1.885887 CCGTTCTGAGAATTTGCCCAA 59.114 47.619 0.00 0.00 0.00 4.12
734 735 1.533625 CCGTTCTGAGAATTTGCCCA 58.466 50.000 0.00 0.00 0.00 5.36
735 736 0.811281 CCCGTTCTGAGAATTTGCCC 59.189 55.000 0.00 0.00 0.00 5.36
736 737 0.171231 GCCCGTTCTGAGAATTTGCC 59.829 55.000 0.00 0.00 0.00 4.52
737 738 0.171231 GGCCCGTTCTGAGAATTTGC 59.829 55.000 0.00 1.31 0.00 3.68
738 739 1.470098 CAGGCCCGTTCTGAGAATTTG 59.530 52.381 0.00 0.00 34.36 2.32
739 740 1.073923 ACAGGCCCGTTCTGAGAATTT 59.926 47.619 0.00 0.00 36.22 1.82
740 741 0.693049 ACAGGCCCGTTCTGAGAATT 59.307 50.000 0.00 0.00 36.22 2.17
741 742 0.693049 AACAGGCCCGTTCTGAGAAT 59.307 50.000 0.00 0.00 36.22 2.40
742 743 0.472471 AAACAGGCCCGTTCTGAGAA 59.528 50.000 4.44 0.00 36.22 2.87
743 744 0.250295 CAAACAGGCCCGTTCTGAGA 60.250 55.000 4.44 0.00 36.22 3.27
744 745 1.237285 CCAAACAGGCCCGTTCTGAG 61.237 60.000 4.44 0.00 36.22 3.35
745 746 1.228124 CCAAACAGGCCCGTTCTGA 60.228 57.895 4.44 0.00 36.22 3.27
746 747 2.268076 CCCAAACAGGCCCGTTCTG 61.268 63.158 4.44 6.01 38.16 3.02
747 748 2.115266 CCCAAACAGGCCCGTTCT 59.885 61.111 4.44 0.00 35.39 3.01
755 756 1.205417 GATGTTCATGGCCCAAACAGG 59.795 52.381 16.68 0.00 36.44 4.00
756 757 1.135315 CGATGTTCATGGCCCAAACAG 60.135 52.381 16.68 4.58 36.44 3.16
757 758 0.887247 CGATGTTCATGGCCCAAACA 59.113 50.000 14.71 14.71 37.32 2.83
758 759 1.173043 TCGATGTTCATGGCCCAAAC 58.827 50.000 0.00 2.35 0.00 2.93
759 760 1.750206 CATCGATGTTCATGGCCCAAA 59.250 47.619 17.50 0.00 0.00 3.28
760 761 1.391577 CATCGATGTTCATGGCCCAA 58.608 50.000 17.50 0.00 0.00 4.12
761 762 1.102809 GCATCGATGTTCATGGCCCA 61.103 55.000 25.47 0.00 0.00 5.36
762 763 1.102809 TGCATCGATGTTCATGGCCC 61.103 55.000 25.47 7.05 0.00 5.80
763 764 0.309922 CTGCATCGATGTTCATGGCC 59.690 55.000 25.47 7.75 0.00 5.36
764 765 0.309922 CCTGCATCGATGTTCATGGC 59.690 55.000 25.47 10.69 0.00 4.40
765 766 0.309922 GCCTGCATCGATGTTCATGG 59.690 55.000 25.47 19.24 0.00 3.66
766 767 0.309922 GGCCTGCATCGATGTTCATG 59.690 55.000 25.47 13.92 0.00 3.07
767 768 1.162181 CGGCCTGCATCGATGTTCAT 61.162 55.000 25.47 0.00 0.00 2.57
768 769 1.815003 CGGCCTGCATCGATGTTCA 60.815 57.895 25.47 15.15 0.00 3.18
769 770 1.521457 TCGGCCTGCATCGATGTTC 60.521 57.895 25.47 11.29 0.00 3.18
770 771 1.815421 GTCGGCCTGCATCGATGTT 60.815 57.895 25.47 0.00 37.73 2.71
771 772 2.202932 GTCGGCCTGCATCGATGT 60.203 61.111 25.47 0.00 37.73 3.06
772 773 2.202919 TGTCGGCCTGCATCGATG 60.203 61.111 21.27 21.27 37.73 3.84
773 774 2.202932 GTGTCGGCCTGCATCGAT 60.203 61.111 0.00 0.00 37.73 3.59
774 775 4.794439 CGTGTCGGCCTGCATCGA 62.794 66.667 0.00 3.37 0.00 3.59
786 787 4.322385 GTTGCCGGTTGCCGTGTC 62.322 66.667 1.90 0.00 46.80 3.67
788 789 4.326766 CTGTTGCCGGTTGCCGTG 62.327 66.667 1.90 0.00 46.80 4.94
792 793 3.846602 CTTGCCTGTTGCCGGTTGC 62.847 63.158 1.90 0.00 40.16 4.17
793 794 1.526575 ATCTTGCCTGTTGCCGGTTG 61.527 55.000 1.90 0.00 40.16 3.77
794 795 1.228552 ATCTTGCCTGTTGCCGGTT 60.229 52.632 1.90 0.00 40.16 4.44
795 796 1.675641 GATCTTGCCTGTTGCCGGT 60.676 57.895 1.90 0.00 40.16 5.28
796 797 2.753966 CGATCTTGCCTGTTGCCGG 61.754 63.158 0.00 0.00 40.16 6.13
797 798 2.787249 CGATCTTGCCTGTTGCCG 59.213 61.111 0.00 0.00 40.16 5.69
798 799 2.042831 AGCGATCTTGCCTGTTGCC 61.043 57.895 0.00 0.00 40.16 4.52
799 800 1.136147 CAGCGATCTTGCCTGTTGC 59.864 57.895 0.00 0.00 41.77 4.17
800 801 1.725641 TACAGCGATCTTGCCTGTTG 58.274 50.000 9.43 0.00 34.65 3.33
801 802 2.679837 CAATACAGCGATCTTGCCTGTT 59.320 45.455 9.43 0.00 34.65 3.16
802 803 2.283298 CAATACAGCGATCTTGCCTGT 58.717 47.619 9.21 9.21 34.65 4.00
803 804 2.283298 ACAATACAGCGATCTTGCCTG 58.717 47.619 0.00 0.00 34.65 4.85
804 805 2.698855 ACAATACAGCGATCTTGCCT 57.301 45.000 0.00 0.00 34.65 4.75
805 806 3.194861 TGTACAATACAGCGATCTTGCC 58.805 45.455 0.00 0.00 34.06 4.52
816 817 0.250793 CCCGGTGGCTGTACAATACA 59.749 55.000 0.00 0.00 37.13 2.29
817 818 0.538118 TCCCGGTGGCTGTACAATAC 59.462 55.000 0.00 0.00 0.00 1.89
818 819 0.538118 GTCCCGGTGGCTGTACAATA 59.462 55.000 0.00 0.00 0.00 1.90
819 820 1.198759 AGTCCCGGTGGCTGTACAAT 61.199 55.000 0.00 0.00 0.00 2.71
820 821 1.823169 GAGTCCCGGTGGCTGTACAA 61.823 60.000 0.00 0.00 0.00 2.41
821 822 2.203728 AGTCCCGGTGGCTGTACA 60.204 61.111 0.00 0.00 0.00 2.90
822 823 2.577593 GAGTCCCGGTGGCTGTAC 59.422 66.667 0.00 0.00 0.00 2.90
823 824 3.066190 CGAGTCCCGGTGGCTGTA 61.066 66.667 0.00 0.00 33.91 2.74
833 834 3.708220 CTCTTGCTCCGCGAGTCCC 62.708 68.421 8.23 0.00 40.65 4.46
834 835 2.202676 CTCTTGCTCCGCGAGTCC 60.203 66.667 8.23 0.00 40.65 3.85
835 836 1.226547 CTCTCTTGCTCCGCGAGTC 60.227 63.158 8.23 0.00 40.65 3.36
836 837 1.244697 TTCTCTCTTGCTCCGCGAGT 61.245 55.000 8.23 0.00 40.65 4.18
837 838 0.109086 TTTCTCTCTTGCTCCGCGAG 60.109 55.000 8.23 4.18 41.13 5.03
838 839 0.388649 GTTTCTCTCTTGCTCCGCGA 60.389 55.000 8.23 0.00 0.00 5.87
839 840 0.667487 TGTTTCTCTCTTGCTCCGCG 60.667 55.000 0.00 0.00 0.00 6.46
840 841 1.462670 CTTGTTTCTCTCTTGCTCCGC 59.537 52.381 0.00 0.00 0.00 5.54
841 842 2.734079 GACTTGTTTCTCTCTTGCTCCG 59.266 50.000 0.00 0.00 0.00 4.63
842 843 3.745458 CAGACTTGTTTCTCTCTTGCTCC 59.255 47.826 0.00 0.00 0.00 4.70
843 844 3.745458 CCAGACTTGTTTCTCTCTTGCTC 59.255 47.826 0.00 0.00 0.00 4.26
844 845 3.737850 CCAGACTTGTTTCTCTCTTGCT 58.262 45.455 0.00 0.00 0.00 3.91
845 846 2.225255 GCCAGACTTGTTTCTCTCTTGC 59.775 50.000 0.00 0.00 0.00 4.01
846 847 2.810852 GGCCAGACTTGTTTCTCTCTTG 59.189 50.000 0.00 0.00 0.00 3.02
847 848 2.439507 TGGCCAGACTTGTTTCTCTCTT 59.560 45.455 0.00 0.00 0.00 2.85
848 849 2.050144 TGGCCAGACTTGTTTCTCTCT 58.950 47.619 0.00 0.00 0.00 3.10
849 850 2.147150 GTGGCCAGACTTGTTTCTCTC 58.853 52.381 5.11 0.00 0.00 3.20
850 851 1.541233 CGTGGCCAGACTTGTTTCTCT 60.541 52.381 5.11 0.00 0.00 3.10
851 852 0.868406 CGTGGCCAGACTTGTTTCTC 59.132 55.000 5.11 0.00 0.00 2.87
852 853 0.468226 TCGTGGCCAGACTTGTTTCT 59.532 50.000 5.11 0.00 0.00 2.52
853 854 0.586802 GTCGTGGCCAGACTTGTTTC 59.413 55.000 21.27 1.79 35.84 2.78
854 855 0.107410 TGTCGTGGCCAGACTTGTTT 60.107 50.000 25.75 0.00 39.24 2.83
855 856 0.814010 GTGTCGTGGCCAGACTTGTT 60.814 55.000 25.75 0.00 39.24 2.83
856 857 1.227556 GTGTCGTGGCCAGACTTGT 60.228 57.895 25.75 0.00 39.24 3.16
857 858 1.227527 TGTGTCGTGGCCAGACTTG 60.228 57.895 25.75 9.01 39.24 3.16
858 859 1.227556 GTGTGTCGTGGCCAGACTT 60.228 57.895 25.75 0.00 39.24 3.01
859 860 2.421739 GTGTGTCGTGGCCAGACT 59.578 61.111 25.75 0.00 39.24 3.24
860 861 2.665185 GGTGTGTCGTGGCCAGAC 60.665 66.667 21.58 21.58 38.98 3.51
861 862 4.293648 CGGTGTGTCGTGGCCAGA 62.294 66.667 5.11 2.64 0.00 3.86
864 865 1.947597 TATACCGGTGTGTCGTGGCC 61.948 60.000 19.93 0.00 0.00 5.36
865 866 0.103572 ATATACCGGTGTGTCGTGGC 59.896 55.000 19.93 0.00 0.00 5.01
866 867 3.713858 TTATATACCGGTGTGTCGTGG 57.286 47.619 19.93 0.00 0.00 4.94
867 868 3.488310 GCTTTATATACCGGTGTGTCGTG 59.512 47.826 19.93 4.29 0.00 4.35
868 869 3.130869 TGCTTTATATACCGGTGTGTCGT 59.869 43.478 19.93 1.43 0.00 4.34
869 870 3.708890 TGCTTTATATACCGGTGTGTCG 58.291 45.455 19.93 2.54 0.00 4.35
870 871 5.344128 CGTATGCTTTATATACCGGTGTGTC 59.656 44.000 19.93 0.00 0.00 3.67
871 872 5.224888 CGTATGCTTTATATACCGGTGTGT 58.775 41.667 19.93 12.26 0.00 3.72
872 873 4.090930 GCGTATGCTTTATATACCGGTGTG 59.909 45.833 19.93 0.00 38.39 3.82
873 874 4.240096 GCGTATGCTTTATATACCGGTGT 58.760 43.478 19.93 14.51 38.39 4.16
874 875 3.615496 GGCGTATGCTTTATATACCGGTG 59.385 47.826 19.93 0.00 42.25 4.94
875 876 3.368739 GGGCGTATGCTTTATATACCGGT 60.369 47.826 13.98 13.98 42.25 5.28
876 877 3.192466 GGGCGTATGCTTTATATACCGG 58.808 50.000 6.92 0.00 42.25 5.28
877 878 3.852286 TGGGCGTATGCTTTATATACCG 58.148 45.455 6.92 0.00 42.25 4.02
878 879 5.080969 TCTGGGCGTATGCTTTATATACC 57.919 43.478 6.92 0.00 42.25 2.73
879 880 5.061808 CGTTCTGGGCGTATGCTTTATATAC 59.938 44.000 6.92 0.00 42.25 1.47
880 881 5.165676 CGTTCTGGGCGTATGCTTTATATA 58.834 41.667 6.92 0.00 42.25 0.86
928 929 0.539669 GGAGGTTTGTGGACTTGGGG 60.540 60.000 0.00 0.00 0.00 4.96
929 930 0.184933 TGGAGGTTTGTGGACTTGGG 59.815 55.000 0.00 0.00 0.00 4.12
930 931 1.318576 GTGGAGGTTTGTGGACTTGG 58.681 55.000 0.00 0.00 0.00 3.61
931 932 1.318576 GGTGGAGGTTTGTGGACTTG 58.681 55.000 0.00 0.00 0.00 3.16
932 933 0.185175 GGGTGGAGGTTTGTGGACTT 59.815 55.000 0.00 0.00 0.00 3.01
933 934 1.716028 GGGGTGGAGGTTTGTGGACT 61.716 60.000 0.00 0.00 0.00 3.85
934 935 1.228459 GGGGTGGAGGTTTGTGGAC 60.228 63.158 0.00 0.00 0.00 4.02
935 936 2.824880 CGGGGTGGAGGTTTGTGGA 61.825 63.158 0.00 0.00 0.00 4.02
936 937 2.282180 CGGGGTGGAGGTTTGTGG 60.282 66.667 0.00 0.00 0.00 4.17
937 938 2.983592 GCGGGGTGGAGGTTTGTG 60.984 66.667 0.00 0.00 0.00 3.33
938 939 4.636435 CGCGGGGTGGAGGTTTGT 62.636 66.667 0.00 0.00 0.00 2.83
947 948 4.899239 GAGAGGATGCGCGGGGTG 62.899 72.222 8.83 0.00 0.00 4.61
954 955 2.049618 GCTAGGCGAGAGGATGCG 60.050 66.667 0.00 0.00 0.00 4.73
955 956 1.288752 GAGCTAGGCGAGAGGATGC 59.711 63.158 0.00 0.00 0.00 3.91
986 987 3.436577 TCCCCATCTAGTAGTCGATCC 57.563 52.381 0.00 0.00 0.00 3.36
987 988 3.191791 GCTTCCCCATCTAGTAGTCGATC 59.808 52.174 0.00 0.00 0.00 3.69
988 989 3.158676 GCTTCCCCATCTAGTAGTCGAT 58.841 50.000 0.00 0.00 0.00 3.59
991 992 1.614413 CCGCTTCCCCATCTAGTAGTC 59.386 57.143 0.00 0.00 0.00 2.59
992 993 1.217183 TCCGCTTCCCCATCTAGTAGT 59.783 52.381 0.00 0.00 0.00 2.73
994 995 2.317040 CTTCCGCTTCCCCATCTAGTA 58.683 52.381 0.00 0.00 0.00 1.82
1149 1191 2.849007 CTCTCGCTGCACGTGTTG 59.151 61.111 18.38 11.24 44.19 3.33
1151 1193 3.983494 AGCTCTCGCTGCACGTGT 61.983 61.111 18.38 0.00 46.86 4.49
1160 1202 1.139947 GTGGTGGAGTAGCTCTCGC 59.860 63.158 0.00 0.00 43.60 5.03
1249 1291 4.570663 CTCATCCCGGTCGCGGTC 62.571 72.222 6.13 0.00 0.00 4.79
1252 1294 4.570663 GTCCTCATCCCGGTCGCG 62.571 72.222 0.00 0.00 0.00 5.87
1253 1295 3.014085 TTGTCCTCATCCCGGTCGC 62.014 63.158 0.00 0.00 0.00 5.19
1287 1329 1.674651 CTCCTCGTCGTCCACCTCA 60.675 63.158 0.00 0.00 0.00 3.86
1296 1338 1.437772 ATGCGTACTCCTCCTCGTCG 61.438 60.000 0.00 0.00 0.00 5.12
1302 1344 0.039074 CCGATCATGCGTACTCCTCC 60.039 60.000 0.00 0.00 0.00 4.30
1321 1363 1.796459 GGACACAATCACACGGTGTAC 59.204 52.381 14.30 0.00 45.09 2.90
1324 1366 1.264020 CTTGGACACAATCACACGGTG 59.736 52.381 6.58 6.58 35.73 4.94
1325 1367 1.134220 ACTTGGACACAATCACACGGT 60.134 47.619 0.00 0.00 35.73 4.83
1326 1368 1.593196 ACTTGGACACAATCACACGG 58.407 50.000 0.00 0.00 35.73 4.94
1327 1369 3.127589 TGTACTTGGACACAATCACACG 58.872 45.455 0.00 0.00 35.73 4.49
1358 1400 0.098728 GCCGCCGTACTTTCGTAGTA 59.901 55.000 0.00 0.00 38.33 1.82
1360 1402 1.153978 TGCCGCCGTACTTTCGTAG 60.154 57.895 0.00 0.00 0.00 3.51
1362 1404 2.735857 GTGCCGCCGTACTTTCGT 60.736 61.111 0.00 0.00 0.00 3.85
1363 1405 3.834373 CGTGCCGCCGTACTTTCG 61.834 66.667 0.00 0.00 0.00 3.46
1366 1408 1.438562 AAAAACGTGCCGCCGTACTT 61.439 50.000 7.22 2.82 40.85 2.24
1383 1433 4.967575 CGCTACGCAAAGAAAGAAAGAAAA 59.032 37.500 0.00 0.00 0.00 2.29
1385 1435 3.558418 ACGCTACGCAAAGAAAGAAAGAA 59.442 39.130 0.00 0.00 0.00 2.52
1387 1437 3.521524 ACGCTACGCAAAGAAAGAAAG 57.478 42.857 0.00 0.00 0.00 2.62
1397 1454 0.515127 CCAATCACAACGCTACGCAA 59.485 50.000 0.00 0.00 0.00 4.85
1400 1457 5.197549 CAAATATCCAATCACAACGCTACG 58.802 41.667 0.00 0.00 0.00 3.51
1421 1478 1.473257 CGGAAGAATCGAGGCATCCAA 60.473 52.381 10.81 0.00 0.00 3.53
1422 1479 0.104855 CGGAAGAATCGAGGCATCCA 59.895 55.000 10.81 0.00 0.00 3.41
1424 1481 1.212616 CACGGAAGAATCGAGGCATC 58.787 55.000 0.00 0.00 0.00 3.91
1425 1482 0.537188 ACACGGAAGAATCGAGGCAT 59.463 50.000 0.00 0.00 0.00 4.40
1426 1483 1.134367 CTACACGGAAGAATCGAGGCA 59.866 52.381 0.00 0.00 0.00 4.75
1427 1484 1.404391 TCTACACGGAAGAATCGAGGC 59.596 52.381 0.00 0.00 0.00 4.70
1428 1485 3.992260 ATCTACACGGAAGAATCGAGG 57.008 47.619 0.00 0.00 0.00 4.63
1429 1486 7.808672 AGTAATATCTACACGGAAGAATCGAG 58.191 38.462 0.00 0.00 0.00 4.04
1451 1508 5.336451 CCACGCACCTTCATATATGCTAGTA 60.336 44.000 7.92 0.00 35.88 1.82
1452 1509 4.560128 CACGCACCTTCATATATGCTAGT 58.440 43.478 7.92 2.13 35.88 2.57
1453 1510 3.928992 CCACGCACCTTCATATATGCTAG 59.071 47.826 7.92 7.60 35.88 3.42
1454 1511 3.576550 TCCACGCACCTTCATATATGCTA 59.423 43.478 7.92 0.00 35.88 3.49
1455 1512 2.368548 TCCACGCACCTTCATATATGCT 59.631 45.455 7.92 0.00 35.88 3.79
1456 1513 2.480419 GTCCACGCACCTTCATATATGC 59.520 50.000 7.92 0.00 34.66 3.14
1457 1514 3.742882 CAGTCCACGCACCTTCATATATG 59.257 47.826 6.36 6.36 0.00 1.78
1458 1515 3.641436 TCAGTCCACGCACCTTCATATAT 59.359 43.478 0.00 0.00 0.00 0.86
1459 1516 3.028130 TCAGTCCACGCACCTTCATATA 58.972 45.455 0.00 0.00 0.00 0.86
1460 1517 1.831106 TCAGTCCACGCACCTTCATAT 59.169 47.619 0.00 0.00 0.00 1.78
1461 1518 1.262417 TCAGTCCACGCACCTTCATA 58.738 50.000 0.00 0.00 0.00 2.15
1462 1519 0.396435 TTCAGTCCACGCACCTTCAT 59.604 50.000 0.00 0.00 0.00 2.57
1463 1520 0.531974 GTTCAGTCCACGCACCTTCA 60.532 55.000 0.00 0.00 0.00 3.02
1464 1521 0.249911 AGTTCAGTCCACGCACCTTC 60.250 55.000 0.00 0.00 0.00 3.46
1465 1522 1.000955 CTAGTTCAGTCCACGCACCTT 59.999 52.381 0.00 0.00 0.00 3.50
1466 1523 0.603569 CTAGTTCAGTCCACGCACCT 59.396 55.000 0.00 0.00 0.00 4.00
1467 1524 0.317479 ACTAGTTCAGTCCACGCACC 59.683 55.000 0.00 0.00 28.33 5.01
1468 1525 3.293311 TTACTAGTTCAGTCCACGCAC 57.707 47.619 0.00 0.00 38.80 5.34
1469 1526 4.021807 TCAATTACTAGTTCAGTCCACGCA 60.022 41.667 0.00 0.00 38.80 5.24
1470 1527 4.491676 TCAATTACTAGTTCAGTCCACGC 58.508 43.478 0.00 0.00 38.80 5.34
1471 1528 5.062308 GCTTCAATTACTAGTTCAGTCCACG 59.938 44.000 0.00 0.00 38.80 4.94
1472 1529 5.062308 CGCTTCAATTACTAGTTCAGTCCAC 59.938 44.000 0.00 0.00 38.80 4.02
1473 1530 5.168569 CGCTTCAATTACTAGTTCAGTCCA 58.831 41.667 0.00 0.00 38.80 4.02
1474 1531 4.033014 GCGCTTCAATTACTAGTTCAGTCC 59.967 45.833 0.00 0.00 38.80 3.85
1475 1532 4.033014 GGCGCTTCAATTACTAGTTCAGTC 59.967 45.833 7.64 0.00 38.80 3.51
1476 1533 3.933332 GGCGCTTCAATTACTAGTTCAGT 59.067 43.478 7.64 0.00 41.62 3.41
1477 1534 3.932710 TGGCGCTTCAATTACTAGTTCAG 59.067 43.478 7.64 0.00 0.00 3.02
1478 1535 3.932822 TGGCGCTTCAATTACTAGTTCA 58.067 40.909 7.64 0.00 0.00 3.18
1479 1536 4.939509 TTGGCGCTTCAATTACTAGTTC 57.060 40.909 7.64 0.00 0.00 3.01
1480 1537 5.897377 ATTTGGCGCTTCAATTACTAGTT 57.103 34.783 7.64 0.00 0.00 2.24
1481 1538 5.296035 GGTATTTGGCGCTTCAATTACTAGT 59.704 40.000 20.58 0.00 35.51 2.57
1482 1539 5.527582 AGGTATTTGGCGCTTCAATTACTAG 59.472 40.000 20.58 0.00 35.51 2.57
1483 1540 5.295787 CAGGTATTTGGCGCTTCAATTACTA 59.704 40.000 20.58 2.37 35.51 1.82
1484 1541 4.096382 CAGGTATTTGGCGCTTCAATTACT 59.904 41.667 20.58 11.16 35.51 2.24
1485 1542 4.095782 TCAGGTATTTGGCGCTTCAATTAC 59.904 41.667 7.64 13.78 34.94 1.89
1486 1543 4.265893 TCAGGTATTTGGCGCTTCAATTA 58.734 39.130 7.64 2.19 0.00 1.40
1487 1544 3.088532 TCAGGTATTTGGCGCTTCAATT 58.911 40.909 7.64 3.21 0.00 2.32
1488 1545 2.722094 TCAGGTATTTGGCGCTTCAAT 58.278 42.857 7.64 5.92 0.00 2.57
1489 1546 2.192664 TCAGGTATTTGGCGCTTCAA 57.807 45.000 7.64 0.03 0.00 2.69
1490 1547 2.192664 TTCAGGTATTTGGCGCTTCA 57.807 45.000 7.64 0.00 0.00 3.02
1491 1548 2.223572 CCATTCAGGTATTTGGCGCTTC 60.224 50.000 7.64 0.00 0.00 3.86
1492 1549 1.750778 CCATTCAGGTATTTGGCGCTT 59.249 47.619 7.64 0.00 0.00 4.68
1493 1550 1.064758 TCCATTCAGGTATTTGGCGCT 60.065 47.619 7.64 0.00 39.02 5.92
1494 1551 1.334869 CTCCATTCAGGTATTTGGCGC 59.665 52.381 0.00 0.00 39.02 6.53
1495 1552 2.643551 ACTCCATTCAGGTATTTGGCG 58.356 47.619 0.00 0.00 39.02 5.69
1496 1553 5.437060 TCTTACTCCATTCAGGTATTTGGC 58.563 41.667 0.00 0.00 39.02 4.52
1497 1554 7.775093 TGATTCTTACTCCATTCAGGTATTTGG 59.225 37.037 0.00 0.00 39.02 3.28
1498 1555 8.737168 TGATTCTTACTCCATTCAGGTATTTG 57.263 34.615 0.00 0.00 39.02 2.32
1499 1556 8.552296 ACTGATTCTTACTCCATTCAGGTATTT 58.448 33.333 0.00 0.00 39.02 1.40
1500 1557 8.095452 ACTGATTCTTACTCCATTCAGGTATT 57.905 34.615 0.00 0.00 39.02 1.89
1501 1558 7.682787 ACTGATTCTTACTCCATTCAGGTAT 57.317 36.000 0.00 0.00 39.02 2.73
1502 1559 8.783660 ATACTGATTCTTACTCCATTCAGGTA 57.216 34.615 0.00 0.00 39.02 3.08
1503 1560 7.682787 ATACTGATTCTTACTCCATTCAGGT 57.317 36.000 0.00 0.00 39.02 4.00
1504 1561 8.642432 TGTATACTGATTCTTACTCCATTCAGG 58.358 37.037 4.17 0.00 35.93 3.86
1505 1562 9.469807 GTGTATACTGATTCTTACTCCATTCAG 57.530 37.037 4.17 0.00 37.27 3.02
1506 1563 8.135529 CGTGTATACTGATTCTTACTCCATTCA 58.864 37.037 4.17 0.00 0.00 2.57
1507 1564 8.136165 ACGTGTATACTGATTCTTACTCCATTC 58.864 37.037 4.17 0.00 0.00 2.67
1508 1565 8.008513 ACGTGTATACTGATTCTTACTCCATT 57.991 34.615 4.17 0.00 0.00 3.16
1509 1566 7.584122 ACGTGTATACTGATTCTTACTCCAT 57.416 36.000 4.17 0.00 0.00 3.41
1510 1567 7.772292 AGTACGTGTATACTGATTCTTACTCCA 59.228 37.037 0.00 0.00 34.02 3.86
1511 1568 8.152309 AGTACGTGTATACTGATTCTTACTCC 57.848 38.462 0.00 0.00 34.02 3.85
1630 1696 1.202830 TGTCATGCCGTAACTTGGGTT 60.203 47.619 0.00 0.00 39.26 4.11
1691 1757 1.344114 GCAAACCTTTGGATCCAAGCA 59.656 47.619 25.69 12.60 38.57 3.91
1932 1998 2.101415 GGCTTTGGAACATGGCTATTCC 59.899 50.000 5.98 5.98 44.08 3.01
2003 2069 4.514585 TGCCCCTTGTGCCAACGT 62.515 61.111 0.00 0.00 0.00 3.99
2042 2108 1.005340 CTGACAGATTGGAGAAGCGC 58.995 55.000 0.00 0.00 0.00 5.92
2208 2274 3.035363 TCCTATGGAAGCACACGGAATA 58.965 45.455 0.00 0.00 0.00 1.75
2232 2298 1.070445 GGATGAGCTGACTGAGGATGG 59.930 57.143 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.